Rw3G004290
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
3735247 .. 3739484
4238 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G004290.1

Sequence Viewer

Length: 1374 bp
ATGTCGAGCATAACAGCTTGCGTTCGGTTCAGGCCTTTGAGCTCCGGAGAGAGAAGAGATCACGGCGATTCCGTCTGCATTCACTGTGTAGATTCTCAGATTTTCGTCCTCAAGGATGAGAAGGAAGAAGAATTTACGTTTAGCTTTGATAAGGTGTTCTACGAAAACTCGGAGCAAGCTCAGGTTTACGAATTTCTAGCTCTGCCTATTGTGAAAGATGCTGTTGATGCTATCAACGGCACGATCATCACTTATGGACAGACTGGAGCTGGGAAGACGTATAGTATGGAGGGGCCTAGCATAATGGTATGCGATGAGCAAAAGAGAGGATTAGTTCCGAGAATAGTTGATGGACTGTTTGATTGCATTAAGTCTTCTGAAGGAACAGTGAAGTACTCGATCAAATTGTCAATGGTGGAGATCTACATGGAAAAAGTAAGGGACCTCTTTGATTTGTCCAAAGACAACATACAGATCAAGGAGAGTAAAGCTCAGGGCATTGTGTTAAATGGAGTGACAGAGATCTCTGTATCGGATCCTGCAGAAGCATTACAGACCCTATCTAGTGGGATAGCTAACAGAACTGTTGGAGAGACCCAGATGAACATGTCCAGCAGCAGAAGTCATTGTATTTACCTATTCACAGTTCAGCAAGAATTAAAAAAAGATAACAGGTTGAAAACTGGCAAATTGATTCTTGTTGACTTGGCTGGTTCTGAGAAAGCAGAGAAAACTGGAGCCGAGGGAAAAGTTCTTGAAGAAGCCAAGACCATCAACAAATCCCTCTCAGCCCTTGGAAATGTGATAAATGCTCTCACATGTGGTTCACCAGGCAAAGCATACCATATCCCATATCGTGATTCCAAACTCACTCGGCTTTTACAAGATGCACTGGGAGGAAACTCCCGTACTGCATTGTTGTGCTGCTGCTCACCAAGCCCTTCAAATGCATCAGAGAGTCTGTCCACTCTTCGCTTTGGAATGAGGGCAAAGCACATAAAGATGTCACTGCATGCCAAGTCCAGTGAAGATAAGTATGCTAAAAAGGATGGATCCCCCTCTTCAAGTAAAAACCAGGCCTGTGAGAGAATTTTGGACCAGTTGAGGGACAGATTTGATGTTGAAGATGTGGTGTTACTTGAGGAGTTGTTCAGATTGAGTGGAATTCTCTATGATCCTGGTTCACCTGAAGATTTGGATTCAGCATTTGAGGATGTCACTTCACAGACAATTATCCAATTGCAGCACATGGTGGAAGAGCTTGTATCAACTGTAGAGGAGCAAACTTTCTCTGTGCACACAAATTACTACTTCCAACCTTGGTACCATGGTATGATCTATACGGAATTTAGTGGTTGGTACTTGGTACATTAA

Protein Analysis

457

Amino Acids

50.87

Weight (kDa)

5.31

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 9 - 333 6.6e-106 Kinesin motor domain
Microtub_bd PF16796 26 - 149 9.9e-21 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1323
AccB1I GGYRCC 1 cut(s) 1323
AccIII TCCGGA 1 cut(s) 44
AclWI GGATC 5 cut(s) 530, 543, 1047, 1060, 1169
AcsI RAATTY 5 cut(s) 131, 191, 1089, 1164, 1346
AcuI CTGAAG 2 cut(s) 399, 1209
AdeI CACNNNGTG 1 cut(s) 1252
AfaI GTAC 5 cut(s) 395, 910, 1325, 1361, 1368
AfiI CCNNNNNNNGG 1 cut(s) 1105
AflIII ACRYGT 2 cut(s) 606, 818
AgsI TTSAA 5 cut(s) 679, 758, 945, 1065, 1124
AjnI CCWGG 3 cut(s) 829, 1074, 1177
AluBI AGCT 9 cut(s) 17, 42, 144, 179, 200, 269, 491, 575, 1261
AluI AGCT 9 cut(s) 17, 42, 144, 179, 200, 269, 491, 575, 1261
Alw21I GWGCWC 2 cut(s) 44, 1299
Alw26I GTCTC 1 cut(s) 587
Alw44I GTGCAC 1 cut(s) 1295
AlwI GGATC 5 cut(s) 530, 543, 1047, 1060, 1169
Aor13HI TCCGGA 1 cut(s) 44
AoxI GGCC 3 cut(s) 32, 293, 1077
ApaLI GTGCAC 1 cut(s) 1295
ApeKI GCWGC 4 cut(s) 615, 924, 927, 1243
ApoI RAATTY 5 cut(s) 131, 191, 1089, 1164, 1346
Asp718I GGTACC 1 cut(s) 1323
AspS9I GGNCC 3 cut(s) 293, 442, 1096
AsuHPI GGTGA 3 cut(s) 819, 924, 1176
AvaII GGWCC 2 cut(s) 442, 1096
BaeGI GKGCMC 1 cut(s) 1299
BaeI ACNNNNGTAYC 4 cut(s) 1307, 1315, 1340, 1348
BamHI GGATCC 2 cut(s) 535, 1052
BanI GGYRCC 1 cut(s) 1323
BanII GRGCYC 1 cut(s) 44
BbsI GAAGAC 2 cut(s) 281, 366
Bbv12I GWGCWC 2 cut(s) 44, 1299
BbvI GCAGC 4 cut(s) 627, 911, 914, 1255
BccI CCATC 3 cut(s) 344, 779, 1043
BceAI ACGGC 2 cut(s) 79, 253
BciT130I CCWGG 3 cut(s) 831, 1076, 1179
BcoDI GTCTC 1 cut(s) 587
BfaI CTAG 3 cut(s) 197, 297, 564
BfmI CTRYAG 2 cut(s) 540, 1272
BglII AGATCT 2 cut(s) 420, 522
BisI GCNGC 4 cut(s) 616, 925, 928, 1244
BlsI GCNGC 4 cut(s) 617, 926, 929, 1245
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 3 cut(s) 831, 1076, 1179
Bme18I GGWCC 2 cut(s) 442, 1096
BmgT120I GGNCC 3 cut(s) 293, 442, 1096
BmiI GGNNCC 6 cut(s) 294, 443, 537, 739, 1054, 1325
BmrFI CCNGG 3 cut(s) 831, 1076, 1179
BmrI ACTGGG 1 cut(s) 902
BmsI GCATC 4 cut(s) 208, 217, 877, 959
BmuI ACTGGG 1 cut(s) 902
BpiI GAAGAC 2 cut(s) 281, 366
BplI GAGNNNNNCTC 2 cut(s) 475, 507
BpmI CTGGAG 2 cut(s) 285, 756
Bpu10I CCTNAGC 2 cut(s) 180, 492
BpuEI CTTGAG 2 cut(s) 95, 1160
BsaI GGTCTC 1 cut(s) 587
BsaJI CCNNGG 4 cut(s) 741, 793, 1319, 1327
BsaWI WCCGGW 1 cut(s) 44
Bsc4I CCNNNNNNNGG 1 cut(s) 1105
Bse1I ACTGG 6 cut(s) 268, 688, 739, 897, 1023, 1099
BseAI TCCGGA 1 cut(s) 44
BseBI CCWGG 3 cut(s) 831, 1076, 1179
BseDI CCNNGG 4 cut(s) 741, 793, 1319, 1327
BseGI GGATG 3 cut(s) 121, 1054, 1219
BseLI CCNNNNNNNGG 1 cut(s) 1105
BseMII CTCAG 5 cut(s) 110, 194, 506, 708, 801
BseNI ACTGG 6 cut(s) 268, 688, 739, 897, 1023, 1099
BseRI GAGGAG 2 cut(s) 1157, 1292
BseSI GKGCMC 1 cut(s) 1299
BseXI GCAGC 4 cut(s) 627, 911, 914, 1255
BseYI CCCAGC 1 cut(s) 269
BshFI GGCC 3 cut(s) 34, 295, 1079
BshNI GGYRCC 1 cut(s) 1323
BsiHKAI GWGCWC 2 cut(s) 44, 1299
BsiSI CCGG 1 cut(s) 45
BslFI GGGAC 2 cut(s) 455, 1121
BslI CCNNNNNNNGG 1 cut(s) 1105
BsmAI GTCTC 1 cut(s) 587
BsmFI GGGAC 2 cut(s) 455, 1121
BsmI GAATGC 1 cut(s) 78
BsnI GGCC 3 cut(s) 34, 295, 1079
Bso31I GGTCTC 1 cut(s) 587
Bsp1286I GDGCHC 2 cut(s) 44, 1299
Bsp13I TCCGGA 1 cut(s) 44
Bsp19I CCATGG 1 cut(s) 1327
BspANI GGCC 3 cut(s) 34, 295, 1079
BspCNI CTCAG 5 cut(s) 109, 193, 505, 709, 800
BspEI TCCGGA 1 cut(s) 44
BspLI GGNNCC 6 cut(s) 294, 443, 537, 739, 1054, 1325
BspMAI CTGCAG 1 cut(s) 544
BspPI GGATC 5 cut(s) 530, 543, 1047, 1060, 1169
BspQI GCTCTTC 1 cut(s) 1251
BspT107I GGYRCC 1 cut(s) 1323
BspTNI GGTCTC 1 cut(s) 587
BsrI ACTGG 6 cut(s) 268, 688, 739, 897, 1023, 1099
BssECI CCNNGG 4 cut(s) 741, 793, 1319, 1327
BssT1I CCWWGG 3 cut(s) 793, 1319, 1327
Bst2UI CCWGG 3 cut(s) 831, 1076, 1179
Bst4CI ACNGT 6 cut(s) 86, 357, 388, 586, 646, 1273
Bst6I CTCTTC 4 cut(s) 49, 975, 1066, 1251
BstC8I GCNNGC 3 cut(s) 19, 177, 1014
BstDEI CTNAG 5 cut(s) 96, 180, 492, 717, 787
BstDSI CCRYGG 1 cut(s) 1327
BstF5I GGATG 3 cut(s) 121, 1054, 1219
BstMAI GTCTC 1 cut(s) 587
BstMWI GCNNNNNNNGC 2 cut(s) 227, 936
BstNI CCWGG 3 cut(s) 831, 1076, 1179
BstNSI RCATGY 3 cut(s) 610, 822, 1016
BstSCI CCNGG 3 cut(s) 829, 1074, 1177
BstSFI CTRYAG 2 cut(s) 540, 1272
BstSLI GKGCMC 1 cut(s) 1299
BstV1I GCAGC 4 cut(s) 627, 911, 914, 1255
BstV2I GAAGAC 2 cut(s) 281, 366
BstX2I RGATCY 4 cut(s) 420, 522, 535, 1052
BstYI RGATCY 4 cut(s) 420, 522, 535, 1052
BsuRI GGCC 3 cut(s) 34, 295, 1079
BtgI CCRYGG 1 cut(s) 1327
BtgZI GCGATG 1 cut(s) 327
BtsCI GGATG 3 cut(s) 121, 1054, 1219
BtsI GCAGTG 1 cut(s) 1007
BtsIMutI CAGTG 5 cut(s) 82, 393, 890, 1007, 1030
Cac8I GCNNGC 3 cut(s) 19, 177, 1014
Cfr13I GGNCC 3 cut(s) 293, 442, 1096
Csp6I GTAC 5 cut(s) 394, 909, 1324, 1360, 1367
CviAII CATG 6 cut(s) 427, 607, 819, 1013, 1249, 1328
CviQI GTAC 5 cut(s) 394, 909, 1324, 1360, 1367
DdeI CTNAG 5 cut(s) 96, 180, 492, 717, 787
DraIII CACNNNGTG 1 cut(s) 1252
Eam1104I CTCTTC 4 cut(s) 49, 975, 1066, 1251
EarI CTCTTC 4 cut(s) 49, 975, 1066, 1251
Ecl136II GAGCTC 1 cut(s) 42
Eco130I CCWWGG 3 cut(s) 793, 1319, 1327
Eco147I AGGCCT 2 cut(s) 34, 1079
Eco24I GRGCYC 1 cut(s) 44
Eco31I GGTCTC 1 cut(s) 587
Eco47I GGWCC 2 cut(s) 442, 1096
Eco53kI GAGCTC 1 cut(s) 42
Eco57I CTGAAG 2 cut(s) 399, 1209
EcoICRI GAGCTC 1 cut(s) 42
EcoO109I RGGNCCY 2 cut(s) 293, 442
EcoRI GAATTC 1 cut(s) 1164
EcoRII CCWGG 3 cut(s) 829, 1074, 1177
EcoT14I CCWWGG 3 cut(s) 793, 1319, 1327
EcoT22I ATGCAT 1 cut(s) 952
EcoT38I GRGCYC 1 cut(s) 44
ErhI CCWWGG 3 cut(s) 793, 1319, 1327
FaeI CATG 6 cut(s) 430, 610, 822, 1016, 1252, 1331
FaqI GGGAC 2 cut(s) 455, 1121
FatI CATG 6 cut(s) 426, 606, 818, 1012, 1248, 1327
Fnu4HI GCNGC 4 cut(s) 616, 925, 928, 1244
FokI GGATG 3 cut(s) 128, 1061, 1226
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 4 cut(s) 616, 925, 928, 1244
FspBI CTAG 3 cut(s) 197, 297, 564
GluI GCNGC 4 cut(s) 616, 925, 928, 1244
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 285, 756
HaeIII GGCC 3 cut(s) 34, 295, 1079
HapII CCGG 1 cut(s) 45
Hin1II CATG 6 cut(s) 430, 610, 822, 1016, 1252, 1331
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HinfI GANTC 6 cut(s) 68, 92, 694, 860, 958, 1199
HpaII CCGG 1 cut(s) 45
HphI GGTGA 3 cut(s) 819, 924, 1176
Hpy166II GTNNAC 6 cut(s) 187, 703, 827, 966, 1184, 1297
Hpy188I TCNGA 8 cut(s) 99, 172, 339, 379, 535, 718, 955, 1154
Hpy188III TCNNGA 3 cut(s) 45, 755, 857
Hpy8I GTNNAC 6 cut(s) 187, 703, 827, 966, 1184, 1297
HpyAV CCTTC 3 cut(s) 115, 374, 951
HpyCH4III ACNGT 6 cut(s) 86, 357, 388, 586, 646, 1273
HpyCH4IV ACGT 2 cut(s) 137, 278
HpyCH4V TGCA 9 cut(s) 78, 366, 542, 890, 914, 950, 1012, 1243, 1297
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 936
HpyF3I CTNAG 5 cut(s) 96, 180, 492, 717, 787
HpySE526I ACGT 2 cut(s) 137, 278
Hsp92II CATG 6 cut(s) 430, 610, 822, 1016, 1252, 1331
Kpn2I TCCGGA 1 cut(s) 44
KpnI GGTACC 1 cut(s) 1327
LguI GCTCTTC 1 cut(s) 1251
LmnI GCTCC 5 cut(s) 47, 172, 266, 737, 1279
Lsp1109I GCAGC 4 cut(s) 627, 911, 914, 1255
LweI GCATC 4 cut(s) 208, 217, 877, 959
MaeI CTAG 3 cut(s) 197, 297, 564
MaeII ACGT 2 cut(s) 137, 278
MaeIII GTNAC 4 cut(s) 514, 1005, 1134, 1216
MfeI CAATTG 1 cut(s) 1238
MflI RGATCY 4 cut(s) 420, 522, 535, 1052
MhlI GDGCHC 2 cut(s) 44, 1299
MlyI GAGTC 1 cut(s) 967
MmeI TCCRAC 2 cut(s) 568, 1339
Mph1103I ATGCAT 1 cut(s) 952
MroI TCCGGA 1 cut(s) 44
MseI TTAA 4 cut(s) 369, 506, 659, 1372
MslI CAYNNNNRTG 2 cut(s) 919, 1001
MspI CCGG 1 cut(s) 45
MspR9I CCNGG 3 cut(s) 831, 1076, 1179
MunI CAATTG 1 cut(s) 1238
Mva1269I GAATGC 1 cut(s) 78
MvaI CCWGG 3 cut(s) 831, 1076, 1179
MwoI GCNNNNNNNGC 2 cut(s) 227, 936
NcoI CCATGG 1 cut(s) 1327
NlaIII CATG 6 cut(s) 430, 610, 822, 1016, 1252, 1331
NlaIV GGNNCC 6 cut(s) 294, 443, 537, 739, 1054, 1325
NmeAIII GCCGAG 2 cut(s) 766, 853
NmuCI GTSAC 3 cut(s) 514, 1005, 1216
NsiI ATGCAT 1 cut(s) 952
NspI RCATGY 3 cut(s) 610, 822, 1016
PaeI GCATGC 1 cut(s) 1016
PceI AGGCCT 2 cut(s) 34, 1079
PciI ACATGT 2 cut(s) 606, 818
PciSI GCTCTTC 1 cut(s) 1251
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 1 cut(s) 78
PfeI GAWTC 5 cut(s) 68, 92, 694, 860, 1199
PkrI GCNGC 4 cut(s) 617, 926, 929, 1245
PleI GAGTC 1 cut(s) 966
PpsI GAGTC 1 cut(s) 966
PpuMI RGGWCCY 1 cut(s) 442
PscI ACATGT 2 cut(s) 606, 818
Psp124BI GAGCTC 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 3 cut(s) 829, 1074, 1177
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 3 cut(s) 829, 1074, 1177
PspN4I GGNNCC 6 cut(s) 294, 443, 537, 739, 1054, 1325
PspPI GGNCC 3 cut(s) 293, 442, 1096
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 1 cut(s) 544
PsuI RGATCY 4 cut(s) 420, 522, 535, 1052
RsaI GTAC 5 cut(s) 395, 910, 1325, 1361, 1368
RsaNI GTAC 5 cut(s) 394, 909, 1324, 1360, 1367
RseI CAYNNNNRTG 2 cut(s) 919, 1001
SacI GAGCTC 1 cut(s) 44
SapI GCTCTTC 1 cut(s) 1251
SaqAI TTAA 4 cut(s) 369, 506, 659, 1372
SatI GCNGC 4 cut(s) 616, 925, 928, 1244
Sau96I GGNCC 3 cut(s) 293, 442, 1096
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 1 cut(s) 967
ScrFI CCNGG 3 cut(s) 831, 1076, 1179
SduI GDGCHC 2 cut(s) 44, 1299
SfaNI GCATC 4 cut(s) 208, 217, 877, 959
SfcI CTRYAG 2 cut(s) 540, 1272
SinI GGWCC 2 cut(s) 442, 1096
SmiMI CAYNNNNRTG 2 cut(s) 919, 1001
SmlI CTYRAG 2 cut(s) 110, 1139
SmoI CTYRAG 2 cut(s) 110, 1139
SphI GCATGC 1 cut(s) 1016
SseBI AGGCCT 2 cut(s) 34, 1079
SspMI CTAG 3 cut(s) 197, 297, 564
SstI GAGCTC 1 cut(s) 44
StuI AGGCCT 2 cut(s) 34, 1079
StyD4I CCNGG 3 cut(s) 829, 1074, 1177
StyI CCWWGG 3 cut(s) 793, 1319, 1327
TaaI ACNGT 6 cut(s) 86, 357, 388, 586, 646, 1273
TaiI ACGT 2 cut(s) 140, 281
TaqI TCGA 2 cut(s) 5, 398
TatI WGTACW 1 cut(s) 393
TfiI GAWTC 5 cut(s) 68, 92, 694, 860, 1199
Tru1I TTAA 4 cut(s) 369, 506, 659, 1372
Tru9I TTAA 4 cut(s) 369, 506, 659, 1372
TscAI CASTG 5 cut(s) 89, 393, 897, 1014, 1030
TseFI GTSAC 3 cut(s) 514, 1005, 1216
TseI GCWGC 4 cut(s) 615, 924, 927, 1243
Tsp45I GTSAC 3 cut(s) 514, 1005, 1216
TspDTI ATGAA 1 cut(s) 617
TspGWI ACGGA 2 cut(s) 61, 1358
TspRI CASTG 5 cut(s) 89, 393, 897, 1014, 1030
VneI GTGCAC 1 cut(s) 1295
VpaK11BI GGWCC 2 cut(s) 442, 1096
XapI RAATTY 5 cut(s) 131, 191, 1089, 1164, 1346
XceI RCATGY 3 cut(s) 610, 822, 1016
XspI CTAG 3 cut(s) 197, 297, 564
ZrmI AGTACT 1 cut(s) 395
Zsp2I ATGCAT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.