AT4G00830

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0003819
Physical Location & Seq
Forward (+)
351969 .. 355248
3280 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00830.1

Sequence Viewer

Length: 1488 bp
ATGTCAGACGCAAGAGATAATGATGACCGTGTGGATTTCGAGGAGGGTAGCTACAGTGAGATGGAGGATGAAGTGGAGGAGGAACAAGTAGAAGAGTATGAAGAGGAGGAAGAAGAAGATGATGATGATGATGACGTTGGCAATCAGAATGCCGAAGAACGTGAGGTGGAGGATTATGGTGATACAAAAGGTGGGGATATGGAAGATGTTCAGGAGGAAATAGCTGAAGATGACGACAACCATATTGATATTGAGACAGCAGATGATGATGAGAAACCACCATCTCCTATTGATGATGAAGATAGGGAAAAGTATTCCCACCTTCTTTCACTTCCTCCTCATGGTTCTGAAGTTTTTATTGGTGGGCTCCCAAGGGATGTTGGAGAAGAGGACCTGAGGGATCTATGTGAAGAGATAGGCGAGATCTTTGAGGTGAGACTGATGAAAGATAGGGACTCTGGTGATAGCAAAGGCTATGCTTTTGTAGCTTTCAAAACCAAAGACGTTGCACAAAAGGCCATTGAGGAGTTGCACAGTAAAGAGTTTAAGGGAAAAACCATAAGGTGCTCTCTTTCCGAAACGAAGAATAGGTTGTTCATTGGTAACATACCAAAGAACTGGACTGAGGATGAGTTTAGAAAAGTCATAGAGGATGTTGGTCCTGGAGTGGAGAACATCGAGCTCATAAAAGACCCAACAAATACCACTCGTAACCGTGGTTTTGCATTTGTTTTGTACTATAACAATGCATGTGCTGATTATTCAAGACAGAAAATGATAGATTCTAATTTTAAGCTTGAGGGTAACGCTCCAACTGTGACTTGGGCAGACCCAAAAAGCTCTCCTGAGCATTCTGCTGCTGCTGCTCAGGTGAAAGCCCTTTATGTCAAGAATATTCCAGAGAATACCTCAACAGAGCAGCTAAAGGAACTCTTTCAGAGGCATGGAGAAGTGACCAAAATCGTTACACCTCCTGGAAAGGGTGGAAAACGTGATTTTGGGTTTGTCCACTATGCTGAAAGATCTAGTGCATTGAAGGCTGTCAAAGATACCGAGAGATATGAAGTCAATGGTCAACCACTAGAAGTTGTGCTTGCTAAACCCCAGGCTGAAAGGAAGCATGACCCTTCTTCTTATTCTTACGGGGCTGCACCTACTCCTGCCCCCTTTGTGCATCCCACGTTTGGTGGTTTTGCTGCGGCTCCTTACGGTGCTATGGGTGCCGGTTTGGGTATTGCCGGTAGTTTTAGTCAGCCAATGATCTATGGTAGAGGAGCAATGCCAACAGGGATGCAAATGGTTCCAATGCTTCTTCCCGATGGCCGAGTTGGCTATGTTCTGCAACAGCCTGGTATGCCGATGGCAGCAGCACCACCACAACGACCAAGAAGAAATGACCGGAATAACGGCTCAAGCGGAGGGTCAGGCAGAGATAACAGTCATGAACATGATGGTAACCGAGGAGGCCGAAGGTACCGACCCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0001101 GO:0002376 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009909 GO:0009987 GO:0010033 GO:0010439 GO:0010453 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010675 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0031399 GO:0032268 GO:0032269 GO:0032870 GO:0032991 GO:0033043 GO:0033044 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0042742 GO:0042762 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043487 GO:0043488 GO:0043489 GO:0043565 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045595 GO:0045824 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048831 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061013 GO:0061085 GO:0062012 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071229 GO:0071310 GO:0071345 GO:0071346 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0097452 GO:0098542 GO:1900376 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902275 GO:1902369 GO:1902373 GO:1902464 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903508 GO:1905933 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

495

Amino Acids

55.14

Weight (kDa)

4.6

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 118 - 188 3.1e-22 RNA recognition motif
RRM_1 PF00076 198 - 259 2.1e-09 RNA recognition motif
RRM_1 PF00076 294 - 361 2.7e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1473
AccB1I GGYRCC 2 cut(s) 1220, 1473
AciI CCGC 2 cut(s) 1199, 1416
AclWI GGATC 1 cut(s) 408
AcoI YGGCCR 1 cut(s) 1321
AcuI CTGAAG 2 cut(s) 246, 369
AfaI GTAC 2 cut(s) 737, 1475
AfiI CCNNNNNNNGG 3 cut(s) 341, 980, 1184
AgsI TTSAA 3 cut(s) 493, 765, 1036
AjnI CCWGG 4 cut(s) 661, 973, 1104, 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 342, 374
AluBI AGCT 7 cut(s) 51, 224, 488, 682, 796, 840, 922
AluI AGCT 7 cut(s) 51, 224, 488, 682, 796, 840, 922
Alw21I GWGCWC 2 cut(s) 569, 684
Alw26I GTCTC 2 cut(s) 248, 430
AlwI GGATC 1 cut(s) 408
AoxI GGCC 3 cut(s) 516, 1321, 1465
ApeKI GCWGC 8 cut(s) 857, 860, 863, 919, 1148, 1196, 1364, 1367
Asp700I GAANNNNTTC 2 cut(s) 207, 933
Asp718I GGTACC 1 cut(s) 1473
AspS9I GGNCC 2 cut(s) 391, 659
AsuHPI GGTGA 4 cut(s) 191, 445, 473, 883
AvaII GGWCC 2 cut(s) 391, 659
AxyI CCTNAGG 1 cut(s) 395
BanI GGYRCC 2 cut(s) 1220, 1473
BanII GRGCYC 2 cut(s) 369, 684
Bbv12I GWGCWC 2 cut(s) 569, 684
BbvI GCAGC 8 cut(s) 844, 847, 850, 931, 1135, 1183, 1376, 1379
BccI CCATC 5 cut(s) 55, 289, 1313, 1354, 1445
BceAI ACGGC 1 cut(s) 1423
BciT130I CCWGG 4 cut(s) 663, 975, 1106, 1350
BcoDI GTCTC 2 cut(s) 248, 430
BfaI CTAG 3 cut(s) 1026, 1082, 1486
BfmI CTRYAG 1 cut(s) 52
BglI GCCNNNNNGGC 1 cut(s) 1329
BglII AGATCT 2 cut(s) 423, 1022
BisI GCNGC 9 cut(s) 858, 861, 864, 920, 1149, 1197, 1200, 1365, 1368
BlsI GCNGC 9 cut(s) 859, 862, 865, 921, 1150, 1198, 1201, 1366, 1369
Bme1390I CCNGG 4 cut(s) 663, 975, 1106, 1350
Bme18I GGWCC 2 cut(s) 391, 659
BmgT120I GGNCC 2 cut(s) 391, 659
BmiI GGNNCC 5 cut(s) 368, 1203, 1222, 1302, 1475
BmrFI CCNGG 4 cut(s) 663, 975, 1106, 1350
BmsI GCATC 2 cut(s) 1183, 1281
BplI GAGNNNNNCTC 2 cut(s) 893, 925
BpmI CTGGAG 1 cut(s) 684
Bpu10I CCTNAGC 2 cut(s) 846, 867
BpuEI CTTGAG 2 cut(s) 818, 1396
BsaJI CCNNGG 4 cut(s) 371, 715, 1104, 1459
BsaWI WCCGGW 1 cut(s) 1398
Bsc4I CCNNNNNNNGG 3 cut(s) 341, 980, 1184
Bse118I RCCGGY 2 cut(s) 1223, 1238
Bse1I ACTGG 1 cut(s) 623
Bse21I CCTNAGG 1 cut(s) 395
Bse3DI GCAATG 1 cut(s) 1284
BseBI CCWGG 4 cut(s) 663, 975, 1106, 1350
BseDI CCNNGG 4 cut(s) 371, 715, 1104, 1459
BseGI GGATG 6 cut(s) 73, 382, 634, 658, 1174, 1296
BseLI CCNNNNNNNGG 3 cut(s) 341, 980, 1184
BseMI GCAATG 1 cut(s) 1284
BseMII CTCAG 4 cut(s) 386, 615, 837, 881
BseNI ACTGG 1 cut(s) 623
BseRI GAGGAG 7 cut(s) 56, 92, 119, 327, 539, 1287, 1476
BseXI GCAGC 8 cut(s) 844, 847, 850, 931, 1135, 1183, 1376, 1379
BsgI GTGCAG 1 cut(s) 1134
BshFI GGCC 3 cut(s) 518, 1323, 1467
BshNI GGYRCC 2 cut(s) 1220, 1473
BsiHKAI GWGCWC 2 cut(s) 569, 684
BsiSI CCGG 3 cut(s) 1224, 1239, 1399
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 3 cut(s) 341, 980, 1184
BsmAI GTCTC 2 cut(s) 248, 430
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 2 cut(s) 154, 850
BsnI GGCC 3 cut(s) 518, 1323, 1467
Bsp1286I GDGCHC 3 cut(s) 369, 569, 684
Bsp143I GATC 4 cut(s) 400, 423, 1022, 1260
BspACI CCGC 2 cut(s) 1199, 1416
BspANI GGCC 3 cut(s) 518, 1323, 1467
BspCNI CTCAG 4 cut(s) 387, 616, 838, 880
BspHI TCATGA 1 cut(s) 1441
BspLI GGNNCC 5 cut(s) 368, 1203, 1222, 1302, 1475
BspPI GGATC 1 cut(s) 408
BspT107I GGYRCC 2 cut(s) 1220, 1473
BsrDI GCAATG 1 cut(s) 1284
BsrFI RCCGGY 2 cut(s) 1223, 1238
BsrI ACTGG 1 cut(s) 623
BssAI RCCGGY 2 cut(s) 1223, 1238
BssECI CCNNGG 4 cut(s) 371, 715, 1104, 1459
BssMI GATC 4 cut(s) 400, 423, 1022, 1260
BssT1I CCWWGG 1 cut(s) 371
Bst2UI CCWGG 4 cut(s) 663, 975, 1106, 1350
Bst4CI ACNGT 7 cut(s) 29, 56, 536, 716, 817, 1211, 1439
Bst6I CTCTTC 4 cut(s) 87, 96, 381, 405
BstC8I GCNNGC 1 cut(s) 1095
BstDEI CTNAG 4 cut(s) 395, 624, 846, 867
BstDSI CCRYGG 1 cut(s) 715
BstEII GGTNACC 1 cut(s) 1454
BstF5I GGATG 6 cut(s) 73, 382, 634, 658, 1174, 1296
BstKTI GATC 4 cut(s) 403, 426, 1025, 1263
BstMAI GTCTC 2 cut(s) 248, 430
BstMBI GATC 4 cut(s) 400, 423, 1022, 1260
BstMWI GCNNNNNNNGC 7 cut(s) 485, 515, 863, 1037, 1220, 1329, 1354
BstNI CCWGG 4 cut(s) 663, 975, 1106, 1350
BstNSI RCATGY 1 cut(s) 753
BstPI GGTNACC 1 cut(s) 1454
BstSCI CCNGG 4 cut(s) 661, 973, 1104, 1348
BstSFI CTRYAG 1 cut(s) 52
BstV1I GCAGC 8 cut(s) 844, 847, 850, 931, 1135, 1183, 1376, 1379
BstX2I RGATCY 3 cut(s) 400, 423, 1022
BstXI CCANNNNNNTGG 1 cut(s) 618
BstYI RGATCY 3 cut(s) 400, 423, 1022
Bsu36I CCTNAGG 1 cut(s) 395
BsuRI GGCC 3 cut(s) 518, 1323, 1467
BtgI CCRYGG 1 cut(s) 715
BtsCI GGATG 6 cut(s) 73, 382, 634, 658, 1174, 1296
BtsIMutI CAGTG 1 cut(s) 61
Cac8I GCNNGC 1 cut(s) 1095
CciI TCATGA 1 cut(s) 1441
Cfr10I RCCGGY 2 cut(s) 1223, 1238
Cfr13I GGNCC 2 cut(s) 391, 659
CseI GACGC 1 cut(s) 17
Csp6I GTAC 2 cut(s) 736, 1474
CviAII CATG 6 cut(s) 341, 750, 944, 1121, 1442, 1448
CviQI GTAC 2 cut(s) 736, 1474
DdeI CTNAG 4 cut(s) 395, 624, 846, 867
DpnI GATC 4 cut(s) 402, 425, 1024, 1262
DpnII GATC 4 cut(s) 400, 423, 1022, 1260
EaeI YGGCCR 1 cut(s) 1321
Eam1104I CTCTTC 4 cut(s) 87, 96, 381, 405
EarI CTCTTC 4 cut(s) 87, 96, 381, 405
Ecl136II GAGCTC 1 cut(s) 682
Eco130I CCWWGG 1 cut(s) 371
Eco24I GRGCYC 2 cut(s) 369, 684
Eco47I GGWCC 2 cut(s) 391, 659
Eco53kI GAGCTC 1 cut(s) 682
Eco57I CTGAAG 2 cut(s) 246, 369
Eco81I CCTNAGG 1 cut(s) 395
Eco91I GGTNACC 1 cut(s) 1454
EcoICRI GAGCTC 1 cut(s) 682
EcoO109I RGGNCCY 1 cut(s) 391
EcoO65I GGTNACC 1 cut(s) 1454
EcoRII CCWGG 4 cut(s) 661, 973, 1104, 1348
EcoT14I CCWWGG 1 cut(s) 371
EcoT22I ATGCAT 1 cut(s) 751
EcoT38I GRGCYC 2 cut(s) 369, 684
ErhI CCWWGG 1 cut(s) 371
FaeI CATG 6 cut(s) 344, 753, 947, 1124, 1445, 1451
FalI AAGNNNNNCTT 4 cut(s) 917, 949, 1077, 1109
FaqI GGGAC 1 cut(s) 467
FatI CATG 6 cut(s) 340, 749, 943, 1120, 1441, 1447
Fnu4HI GCNGC 9 cut(s) 858, 861, 864, 920, 1149, 1197, 1200, 1365, 1368
FokI GGATG 6 cut(s) 80, 389, 641, 665, 1161, 1303
FriOI GRGCYC 2 cut(s) 369, 684
Fsp4HI GCNGC 9 cut(s) 858, 861, 864, 920, 1149, 1197, 1200, 1365, 1368
FspBI CTAG 3 cut(s) 1026, 1082, 1486
GluI GCNGC 9 cut(s) 858, 861, 864, 920, 1149, 1197, 1200, 1365, 1368
GsuI CTGGAG 1 cut(s) 684
HaeIII GGCC 3 cut(s) 518, 1323, 1467
HapII CCGG 3 cut(s) 1224, 1239, 1399
HgaI GACGC 1 cut(s) 17
Hin1II CATG 6 cut(s) 344, 753, 947, 1124, 1445, 1451
HincII GTYRAC 1 cut(s) 1076
HindII GTYRAC 1 cut(s) 1076
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 2 cut(s) 455, 782
HpaII CCGG 3 cut(s) 1224, 1239, 1399
HphI GGTGA 4 cut(s) 191, 445, 473, 883
Hpy166II GTNNAC 2 cut(s) 1009, 1076
Hpy188I TCNGA 5 cut(s) 7, 147, 349, 577, 939
Hpy188III TCNNGA 7 cut(s) 212, 765, 845, 889, 899, 1316, 1442
Hpy8I GTNNAC 2 cut(s) 1009, 1076
HpyAV CCTTC 4 cut(s) 332, 1030, 1137, 1464
HpyCH4III ACNGT 7 cut(s) 29, 56, 536, 716, 817, 1211, 1439
HpyCH4IV ACGT 5 cut(s) 135, 160, 504, 991, 1181
HpyCH4V TGCA 9 cut(s) 509, 532, 725, 749, 1031, 1151, 1174, 1294, 1342
HpyF10VI GCNNNNNNNGC 7 cut(s) 485, 515, 863, 1037, 1220, 1329, 1354
HpyF3I CTNAG 4 cut(s) 395, 624, 846, 867
HpySE526I ACGT 5 cut(s) 135, 160, 504, 991, 1181
Hsp92II CATG 6 cut(s) 344, 753, 947, 1124, 1445, 1451
KpnI GGTACC 1 cut(s) 1477
Kzo9I GATC 4 cut(s) 400, 423, 1022, 1260
LmnI GCTCC 4 cut(s) 372, 814, 1207, 1274
Lsp1109I GCAGC 8 cut(s) 844, 847, 850, 931, 1135, 1183, 1376, 1379
LweI GCATC 2 cut(s) 1183, 1281
MaeI CTAG 3 cut(s) 1026, 1082, 1486
MaeII ACGT 5 cut(s) 135, 160, 504, 991, 1181
MaeIII GTNAC 7 cut(s) 602, 710, 803, 817, 952, 964, 1454
MalI GATC 4 cut(s) 402, 425, 1024, 1262
MboI GATC 4 cut(s) 400, 423, 1022, 1260
MflI RGATCY 3 cut(s) 400, 423, 1022
MhlI GDGCHC 3 cut(s) 369, 569, 684
MluCI AATT 1 cut(s) 787
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 2 cut(s) 361, 836
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 2 cut(s) 207, 933
MseI TTAA 2 cut(s) 546, 792
MslI CAYNNNNRTG 1 cut(s) 1446
MspI CCGG 3 cut(s) 1224, 1239, 1399
MspR9I CCNGG 4 cut(s) 663, 975, 1106, 1350
Mva1269I GAATGC 2 cut(s) 154, 850
MvaI CCWGG 4 cut(s) 663, 975, 1106, 1350
MwoI GCNNNNNNNGC 7 cut(s) 485, 515, 863, 1037, 1220, 1329, 1354
NdeII GATC 4 cut(s) 400, 423, 1022, 1260
NlaIII CATG 6 cut(s) 344, 753, 947, 1124, 1445, 1451
NlaIV GGNNCC 5 cut(s) 368, 1203, 1222, 1302, 1475
NmeAIII GCCGAG 1 cut(s) 1349
NmuCI GTSAC 2 cut(s) 817, 952
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 1 cut(s) 753
PagI TCATGA 1 cut(s) 1441
PctI GAATGC 2 cut(s) 154, 850
PdmI GAANNNNTTC 2 cut(s) 207, 933
PfeI GAWTC 1 cut(s) 782
PfoI TCCNGGA 2 cut(s) 661, 973
PkrI GCNGC 9 cut(s) 859, 862, 865, 921, 1150, 1198, 1201, 1366, 1369
PleI GAGTC 1 cut(s) 449
PpsI GAGTC 1 cut(s) 449
PpuMI RGGWCCY 1 cut(s) 391
Psp124BI GAGCTC 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 4 cut(s) 661, 973, 1104, 1348
PspEI GGTNACC 1 cut(s) 1454
PspGI CCWGG 4 cut(s) 661, 973, 1104, 1348
PspN4I GGNNCC 5 cut(s) 368, 1203, 1222, 1302, 1475
PspPI GGNCC 2 cut(s) 391, 659
PspPPI RGGWCCY 1 cut(s) 391
PsuI RGATCY 3 cut(s) 400, 423, 1022
RsaI GTAC 2 cut(s) 737, 1475
RsaNI GTAC 2 cut(s) 736, 1474
RseI CAYNNNNRTG 1 cut(s) 1446
SacI GAGCTC 1 cut(s) 684
SaqAI TTAA 2 cut(s) 546, 792
SatI GCNGC 9 cut(s) 858, 861, 864, 920, 1149, 1197, 1200, 1365, 1368
Sau3AI GATC 4 cut(s) 400, 423, 1022, 1260
Sau96I GGNCC 2 cut(s) 391, 659
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 4 cut(s) 663, 975, 1106, 1350
SduI GDGCHC 3 cut(s) 369, 569, 684
SfaNI GCATC 2 cut(s) 1183, 1281
SfcI CTRYAG 1 cut(s) 52
SinI GGWCC 2 cut(s) 391, 659
SmiMI CAYNNNNRTG 1 cut(s) 1446
SmlI CTYRAG 2 cut(s) 797, 1411
SmoI CTYRAG 2 cut(s) 797, 1411
Sse9I AATT 1 cut(s) 787
SsiI CCGC 2 cut(s) 1199, 1416
SspI AATATT 1 cut(s) 895
SspMI CTAG 3 cut(s) 1026, 1082, 1486
SstI GAGCTC 1 cut(s) 684
StyD4I CCNGG 4 cut(s) 661, 973, 1104, 1348
StyI CCWWGG 1 cut(s) 371
TaaI ACNGT 7 cut(s) 29, 56, 536, 716, 817, 1211, 1439
TaiI ACGT 5 cut(s) 138, 163, 507, 994, 1184
TaqI TCGA 2 cut(s) 39, 678
TasI AATT 1 cut(s) 787
TatI WGTACW 1 cut(s) 735
TauI GCSGC 1 cut(s) 1202
TfiI GAWTC 1 cut(s) 782
Tru1I TTAA 2 cut(s) 546, 792
Tru9I TTAA 2 cut(s) 546, 792
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 2 cut(s) 817, 952
TseI GCWGC 8 cut(s) 857, 860, 863, 919, 1148, 1196, 1364, 1367
Tsp45I GTSAC 2 cut(s) 817, 952
TspDTI ATGAA 7 cut(s) 84, 114, 312, 458, 586, 1077, 1458
TspRI CASTG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 391, 659
XceI RCATGY 1 cut(s) 753
XcmI CCANNNNNNNNNTGG 1 cut(s) 819
XmnI GAANNNNTTC 2 cut(s) 207, 933
XspI CTAG 3 cut(s) 1026, 1082, 1486
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.