RchiOBHm_Chr1g0360911

Heterogeneous nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003819
Physical Location & Seq
Reverse (-)
52813551 .. 52818407
4857 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58585

Sequence Viewer

Length: 1446 bp
ATGGCTGAAGGAGCGGAAGTTGATGAGCGGGTGGATCTAGATGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACAAGCAGATGAAGATGGAGCTGGTGGAGGCAGTGATGAAAATGTGGAGGAACATGCTGAAGAAGCAGAGGAAGATCCTACAACCGGGGCTAGCGAGAAAGAGCATTCTCCAGAACCATATGGAAGCGAAAACGGTGGTGAGTTGGTGGAAGATGAAGAGAAACCTTCTGCTTCTCTCAGTCAGGAGGAGAAAGAGAAGCATGCTCAACTGCTTGCCCTTCCTCCTTATGGGTCTGAAGTTTTCATTGGTGGCCTTCCTAAAGATGCCTCAGAAGAAGAGTTGAGGGAGCTAGGCAGTGAAATAGGCGAAATTCTTGAGATAAGATTAATGCAAGACAGGGAAACTGGTGAGAGCAAAGGTTATGCATTCATAGGATTCAAGTCTAAAGAGGTTGCACAAACGGCTATTGAAGAATTACATAATAAAGCATTTAAGGGTAAGACTTTAAGATGTTCACTTTCTGAAACAAAACATAGACTGTTCATTGGTAATGTTCCAAAAATCTGGACCGAGGATGAGTTTCGAAAAGTTATTGAAGAGGTTGGTCCTGGAGTTGAGCACATTGAGCTGATAAAGGATCCTCAAAATCCAAGTAGAAATCGCGGTTTTGCTTTTGTTTTGTATTACAACAATGCCTGCGCTGATTATTCAAGACAAAAAATGTCAAATTCAAGTTTTAAGCTGGAGGGAAATACCCCAACTGTGACCTGGGCTGATCCAAAAAGTACATCTGATCATTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATTCCTGAGAACACTAGCACTGAAACGCTGAAGGAAATATTCCAGCGCCATGGTGAAGTGATAAAAGTAGTTATGCCACCTGGCAAAGGTGGTCAAGGCAAACGGGATTTTGGATTTGTACACTATGCTGAAAGGTCAAGTGCTCTGAAGGCTGTTAAAGATAGTGAGAAATATGAAATTGATGGCCATCCACTAGAGGTTGTTCTTGCGAAGCCTCAGACTGATAAAAAAGCCCCATCAGATTATCCCTACAATGCTGGGCCTCACACAAATCATGCTTCACACCCAGGGTATGGTGGGTTTGCTGGAAATCCATACGGCTCTGCAGGCGCTGGATTTGGTGTTGCCCCACCATTTCAGCAGCCAATGATATATGGTAGAGGGCCAATGCCATCAGGAATGCAGATGGTGCCAATGGTTCTACCAGATGGTCGAATAGGCTATGTTCTTCAGCAGCCTGGGGTACAGATGCCACCTCCTCGGCCTCGAAGAGGGGATCGAAACAATGGTCCGAGTGGACAACCAGGGAGAGGAGGTGGTAGCAGCGATGAAGGCAATCGTGGCAGGAGATACCGGCCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0001101 GO:0002376 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009909 GO:0009987 GO:0010033 GO:0010439 GO:0010453 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010675 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0031399 GO:0032268 GO:0032269 GO:0032870 GO:0032991 GO:0033043 GO:0033044 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0042742 GO:0042762 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043487 GO:0043488 GO:0043489 GO:0043565 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045595 GO:0045824 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048831 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061013 GO:0061085 GO:0062012 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071229 GO:0071310 GO:0071345 GO:0071346 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0097452 GO:0098542 GO:1900376 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902275 GO:1902369 GO:1902373 GO:1902464 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903508 GO:1905933 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

481

Amino Acids

52.74

Weight (kDa)

4.91

Isoelectric Point (pI)

49.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 108 - 178 3.7e-21 RNA recognition motif
RRM_1 PF00076 188 - 254 1.1e-08 RNA recognition motif
RRM_1 PF00076 283 - 352 1.8e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1270
AccB7I CCANNNNNTGG 1 cut(s) 1154
AccBSI CCGCTC 2 cut(s) 14, 28
AccII CGCG 1 cut(s) 687
AciI CCGC 3 cut(s) 14, 28, 687
AclWI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
AcoI YGGCCR 1 cut(s) 1045
AcsI RAATTY 2 cut(s) 393, 751
AcuI CTGAAG 6 cut(s) 27, 162, 339, 911, 1028, 1295
AfaI GTAC 3 cut(s) 811, 981, 1326
AfiI CCNNNNNNNGG 6 cut(s) 167, 311, 947, 1154, 1352, 1391
AgsI TTSAA 5 cut(s) 463, 494, 620, 735, 756
AjnI CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
AluBI AGCT 4 cut(s) 104, 373, 652, 766
AluI AGCT 4 cut(s) 104, 373, 652, 766
Alw21I GWGCWC 2 cut(s) 645, 1006
AlwI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
AlwNI CAGNNNCTG 1 cut(s) 1193
AoxI GGCC 6 cut(s) 334, 1045, 1121, 1244, 1343, 1436
ApeKI GCWGC 5 cut(s) 827, 830, 1222, 1315, 1404
ApoI RAATTY 2 cut(s) 393, 751
ArsI GACNNNNNNTTYG 2 cut(s) 1354, 1386
AseI ATTAAT 1 cut(s) 410
AspLEI GCGC 3 cut(s) 725, 909, 1193
AspS9I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 4 cut(s) 233, 443, 850, 926
AsuII TTCGAA 1 cut(s) 607
AsuNHI GCTAGC 1 cut(s) 173
AvaII GGWCC 3 cut(s) 591, 629, 1370
BalI TGGCCA 1 cut(s) 1047
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 1270
Bbv12I GWGCWC 2 cut(s) 645, 1006
BbvI GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BccI CCATC 8 cut(s) 58, 92, 1037, 1056, 1105, 1261, 1261, 1283
BceAI ACGGC 2 cut(s) 501, 1195
BciT130I CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 1 cut(s) 169
BfaI CTAG 5 cut(s) 38, 174, 374, 876, 1055
BfmI CTRYAG 1 cut(s) 1185
BfoI RGCGCY 2 cut(s) 910, 1194
BisI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
BlsI GCNGC 5 cut(s) 829, 832, 1224, 1317, 1406
Bme1390I CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
Bme18I GGWCC 3 cut(s) 591, 629, 1370
BmgT120I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
BmiI GGNNCC 2 cut(s) 663, 1272
BmrFI CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
BmsI GCATC 2 cut(s) 337, 1320
BmtI GCTAGC 1 cut(s) 177
BpmI CTGGAG 3 cut(s) 177, 654, 788
Bpu10I CCTNAGC 1 cut(s) 834
Bpu14I TTCGAA 1 cut(s) 607
BpuEI CTTGAG 1 cut(s) 419
BpuMI CCSGG 1 cut(s) 169
BsaBI GATNNNNATC 1 cut(s) 1047
BsaJI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BsaXI ACNNNNNCTCC 3 cut(s) 33, 1381, 1411
Bsc4I CCNNNNNNNGG 6 cut(s) 167, 311, 947, 1154, 1352, 1391
Bse118I RCCGGY 1 cut(s) 1434
Bse1I ACTGG 1 cut(s) 433
Bse8I GATNNNNATC 1 cut(s) 1047
BseBI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BseDI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BseGI GGATG 3 cut(s) 73, 604, 1048
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 6 cut(s) 167, 311, 947, 1154, 1352, 1391
BseMII CTCAG 5 cut(s) 274, 366, 848, 858, 1091
BseNI ACTGG 1 cut(s) 433
BseRI GAGGAG 3 cut(s) 284, 1329, 1407
BseXI GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BseYI CCCAGC 1 cut(s) 1118
Bsh1236I CGCG 1 cut(s) 687
BshFI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BshNI GGYRCC 1 cut(s) 1270
BsiHKAI GWGCWC 2 cut(s) 645, 1006
BsiSI CCGG 2 cut(s) 168, 1435
BslI CCNNNNNNNGG 6 cut(s) 167, 311, 947, 1154, 1352, 1391
BsmI GAATGC 3 cut(s) 187, 449, 1266
BsnI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
Bsp119I TTCGAA 1 cut(s) 607
Bsp1286I GDGCHC 2 cut(s) 645, 1006
Bsp1407I TGTACA 1 cut(s) 979
Bsp143I GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
Bsp19I CCATGG 1 cut(s) 910
BspACI CCGC 3 cut(s) 14, 28, 687
BspANI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BspCNI CTCAG 5 cut(s) 273, 365, 847, 859, 1090
BspFNI CGCG 1 cut(s) 687
BspLI GGNNCC 2 cut(s) 663, 1272
BspMAI CTGCAG 1 cut(s) 1189
BspOI GCTAGC 1 cut(s) 177
BspPI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
BspT104I TTCGAA 1 cut(s) 607
BspT107I GGYRCC 1 cut(s) 1270
BsrBI CCGCTC 2 cut(s) 14, 28
BsrFI RCCGGY 1 cut(s) 1434
BsrGI TGTACA 1 cut(s) 979
BsrI ACTGG 1 cut(s) 433
BssAI RCCGGY 1 cut(s) 1434
BssECI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BssMI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
BssT1I CCWWGG 1 cut(s) 910
Bst2UI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
Bst4CI ACNGT 3 cut(s) 218, 564, 787
Bst6I CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
BstAPI GCANNNNNTGC 1 cut(s) 1270
BstAUI TGTACA 1 cut(s) 979
BstBI TTCGAA 1 cut(s) 607
BstC8I GCNNGC 5 cut(s) 175, 285, 297, 721, 1189
BstDEI CTNAG 5 cut(s) 260, 352, 834, 867, 1077
BstDSI CCRYGG 1 cut(s) 910
BstENI CCTNNNNNAGG 2 cut(s) 945, 1350
BstF5I GGATG 3 cut(s) 73, 604, 1048
BstFNI CGCG 1 cut(s) 687
BstH2I RGCGCY 2 cut(s) 910, 1194
BstHHI GCGC 3 cut(s) 725, 909, 1193
BstKTI GATC 6 cut(s) 37, 160, 664, 802, 820, 1360
BstMBI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
BstMWI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
BstNI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BstNSI RCATGY 2 cut(s) 140, 287
BstSCI CCNGG 7 cut(s) 167, 631, 791, 940, 1147, 1318, 1384
BstSFI CTRYAG 1 cut(s) 1185
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BstX2I RGATCY 3 cut(s) 34, 157, 661
BstXI CCANNNNNNTGG 2 cut(s) 588, 911
BstYI RGATCY 3 cut(s) 34, 157, 661
BsuRI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BtgI CCRYGG 1 cut(s) 910
BtgZI GCGATG 1 cut(s) 1422
BtsCI GGATG 3 cut(s) 73, 604, 1048
BtsI GCAGTG 2 cut(s) 121, 385
BtsIMutI CAGTG 3 cut(s) 121, 385, 879
Cac8I GCNNGC 5 cut(s) 175, 285, 297, 721, 1189
CaiI CAGNNNCTG 1 cut(s) 1193
CfoI GCGC 3 cut(s) 725, 909, 1193
Cfr10I RCCGGY 1 cut(s) 1434
Cfr13I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
Csp6I GTAC 3 cut(s) 810, 980, 1325
CviAII CATG 5 cut(s) 55, 137, 284, 911, 1136
CviQI GTAC 3 cut(s) 810, 980, 1325
DdeI CTNAG 5 cut(s) 260, 352, 834, 867, 1077
DpnI GATC 6 cut(s) 36, 159, 663, 801, 819, 1359
DpnII GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
EaeI YGGCCR 1 cut(s) 1045
Eam1104I CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
EarI CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
Eco130I CCWWGG 1 cut(s) 910
Eco47I GGWCC 3 cut(s) 591, 629, 1370
Eco57I CTGAAG 6 cut(s) 27, 162, 339, 911, 1028, 1295
EcoNI CCTNNNNNAGG 2 cut(s) 945, 1350
EcoRII CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
EcoT14I CCWWGG 1 cut(s) 910
EcoT22I ATGCAT 1 cut(s) 451
ErhI CCWWGG 1 cut(s) 910
FaeI CATG 5 cut(s) 58, 140, 287, 914, 1139
FatI CATG 5 cut(s) 54, 136, 283, 910, 1135
FauI CCCGC 1 cut(s) 21
FauNDI CATATG 1 cut(s) 202
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
FokI GGATG 3 cut(s) 80, 611, 1035
Fsp4HI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
FspBI CTAG 5 cut(s) 38, 174, 374, 876, 1055
GlaI GCGC 3 cut(s) 724, 908, 1192
GluI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
GsaI CCCAGC 1 cut(s) 1122
GsuI CTGGAG 3 cut(s) 177, 654, 788
HaeII RGCGCY 2 cut(s) 910, 1194
HaeIII GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
HapII CCGG 2 cut(s) 168, 1435
HhaI GCGC 3 cut(s) 725, 909, 1193
Hin1II CATG 5 cut(s) 58, 140, 287, 914, 1139
Hin6I GCGC 3 cut(s) 723, 907, 1191
HinP1I GCGC 3 cut(s) 723, 907, 1191
HinfI GANTC 1 cut(s) 459
HpaII CCGG 2 cut(s) 168, 1435
HphI GGTGA 4 cut(s) 233, 443, 850, 926
Hpy166II GTNNAC 3 cut(s) 539, 982, 1379
Hpy188I TCNGA 8 cut(s) 319, 355, 547, 817, 1008, 1080, 1102, 1374
Hpy188III TCNNGA 8 cut(s) 38, 194, 266, 398, 589, 735, 866, 1257
Hpy8I GTNNAC 3 cut(s) 539, 982, 1379
HpyAV CCTTC 7 cut(s) 258, 311, 347, 835, 886, 1003, 1406
HpyCH4III ACNGT 3 cut(s) 218, 564, 787
HpyCH4V TGCA 5 cut(s) 415, 449, 479, 1187, 1264
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
HpyF3I CTNAG 5 cut(s) 260, 352, 834, 867, 1077
Hsp92II CATG 5 cut(s) 58, 140, 287, 914, 1139
HspAI GCGC 3 cut(s) 723, 907, 1191
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
LmnI GCTCC 3 cut(s) 11, 101, 370
Lsp1109I GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
LweI GCATC 2 cut(s) 337, 1320
MaeI CTAG 5 cut(s) 38, 174, 374, 876, 1055
MaeIII GTNAC 1 cut(s) 787
MalI GATC 6 cut(s) 36, 159, 663, 801, 819, 1359
MbiI CCGCTC 2 cut(s) 14, 28
MboI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
MflI RGATCY 3 cut(s) 34, 157, 661
MhlI GDGCHC 2 cut(s) 645, 1006
MlsI TGGCCA 1 cut(s) 1047
MluCI AATT 5 cut(s) 49, 393, 497, 751, 1038
MluNI TGGCCA 1 cut(s) 1047
Mox20I TGGCCA 1 cut(s) 1047
Mph1103I ATGCAT 1 cut(s) 451
MscI TGGCCA 1 cut(s) 1047
MseI TTAA 5 cut(s) 410, 516, 530, 762, 1017
Msp20I TGGCCA 1 cut(s) 1047
MspI CCGG 2 cut(s) 168, 1435
MspR9I CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
Mva1269I GAATGC 3 cut(s) 187, 449, 1266
MvaI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
NciI CCSGG 1 cut(s) 169
NcoI CCATGG 1 cut(s) 910
NdeI CATATG 1 cut(s) 202
NdeII GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
NheI GCTAGC 1 cut(s) 173
NlaIII CATG 5 cut(s) 58, 140, 287, 914, 1139
NlaIV GGNNCC 2 cut(s) 663, 1272
NmeAIII GCCGAG 1 cut(s) 1321
NmuCI GTSAC 1 cut(s) 787
NsiI ATGCAT 1 cut(s) 451
NspI RCATGY 2 cut(s) 140, 287
NspV TTCGAA 1 cut(s) 607
PaeI GCATGC 1 cut(s) 287
PasI CCCWGGG 1 cut(s) 1148
PctI GAATGC 3 cut(s) 187, 449, 1266
PfeI GAWTC 1 cut(s) 459
PflMI CCANNNNNTGG 1 cut(s) 1154
PfoI TCCNGGA 1 cut(s) 631
PkrI GCNGC 5 cut(s) 829, 832, 1224, 1317, 1406
PshBI ATTAAT 1 cut(s) 410
Psp6I CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
PspFI CCCAGC 1 cut(s) 1118
PspGI CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
PspN4I GGNNCC 2 cut(s) 663, 1272
PspPI GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
PstI CTGCAG 1 cut(s) 1189
PstNI CAGNNNCTG 1 cut(s) 1193
PsuI RGATCY 3 cut(s) 34, 157, 661
RsaI GTAC 3 cut(s) 811, 981, 1326
RsaNI GTAC 3 cut(s) 810, 980, 1325
SaqAI TTAA 5 cut(s) 410, 516, 530, 762, 1017
SatI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
Sau3AI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
Sau96I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
ScrFI CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
SduI GDGCHC 2 cut(s) 645, 1006
SfaNI GCATC 2 cut(s) 337, 1320
SfcI CTRYAG 1 cut(s) 1185
SfuI TTCGAA 1 cut(s) 607
SinI GGWCC 3 cut(s) 591, 629, 1370
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SphI GCATGC 1 cut(s) 287
Sse9I AATT 5 cut(s) 49, 393, 497, 751, 1038
SsiI CCGC 3 cut(s) 14, 28, 687
SspI AATATT 1 cut(s) 900
SspMI CTAG 5 cut(s) 38, 174, 374, 876, 1055
StyD4I CCNGG 7 cut(s) 167, 631, 791, 940, 1147, 1318, 1384
StyI CCWWGG 1 cut(s) 910
TaaI ACNGT 3 cut(s) 218, 564, 787
TaqI TCGA 4 cut(s) 607, 1294, 1348, 1360
TaqII GACCGA 1 cut(s) 608
TasI AATT 5 cut(s) 49, 393, 497, 751, 1038
TatI WGTACW 2 cut(s) 809, 979
TfiI GAWTC 1 cut(s) 459
Tru1I TTAA 5 cut(s) 410, 516, 530, 762, 1017
Tru9I TTAA 5 cut(s) 410, 516, 530, 762, 1017
TscAI CASTG 3 cut(s) 121, 385, 886
TseFI GTSAC 1 cut(s) 787
TseI GCWGC 5 cut(s) 827, 830, 1222, 1315, 1404
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 8 cut(s) 108, 135, 252, 316, 442, 556, 1050, 1425
TspRI CASTG 3 cut(s) 121, 385, 886
Van91I CCANNNNNTGG 1 cut(s) 1154
VpaK11BI GGWCC 3 cut(s) 591, 629, 1370
VspI ATTAAT 1 cut(s) 410
XagI CCTNNNNNAGG 2 cut(s) 945, 1350
XapI RAATTY 2 cut(s) 393, 751
XbaI TCTAGA 1 cut(s) 37
XceI RCATGY 2 cut(s) 140, 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 789
XspI CTAG 5 cut(s) 38, 174, 374, 876, 1055
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.