MD01G1087600.v1.1

Heterogeneous nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0003819
Physical Location & Seq
Reverse (-)
19696748 .. 19701856
5109 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1087600.v1.1.491

Sequence Viewer

Length: 1446 bp
ATGGCAGAAGGAGCGGAAGTTGAGGACCGGGTGGATCTGGATGAGGACAACTTCATGGAAGAGATGGACGATGATGTAGATGAGCAAATAGATGAAGATGGAGTAGATGGAGGCAGTGATGAAAATGTGGAGGAGCATGTTGAAGCAGCACGTGAAGATCCTGCAACTAAGACTAGCTACACAGATCACCCACCCAAACCAGATGAAAGCCACAATGCTGGTGAATTTGTGGAAGATGGAGAGAAACCTTCTACTCCTGTCAATGAAGAGGAGAAAGAGAAGCATGCACAACTTCTTGCCCTTCCCCCCTATGGGTCTGAAGTTTTCATTGGTGGACTTCCTAAAGACACTTCGGAAGAAGATCTGAGGGATCTATGTGATGAAATAGGCGAAATTATTGAGGTAAGATTAATGCAAGACAGGGAAACTGGTGAAAGCAAGGGTTATGCATTTATAGGATTTAAGACTAAAGAGGTTGCACAAAAAGCCATTGAAGAGTTGCATAGTAAAGTATTCAAGGGTAAAACCTTAAGATGTTCACTTTCTGAAACTAAATATAGATTGTTCATTGGTAATGTTCCAAAAATCTGGACTGAGGATGAGTTTCGTAAAGTCATTGATGAGGTTGGTCCTGGGATTGAGCACGTTGAACTAATAAAGGATCCTCAAAATCCAAGCAGAAATCGTGGTTTTGCTTTTGTTTTGTATTATAATAATGCCTGCGCCGATTATTCAAGACAGAAAATGTCGAATTCAAATTTTAAGCTGGATGGAAATACCCCAACTGTTACCTGGGCAGATCCAAAAAGTACTCCTGATCATACTGCTGCAGCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAACACTAGCACTGAGAAGCTGAAGGAACTATTCCAGCACCATGGTGAAGTGACAAAAGTGGTTATGCCACCTGGAAAAGGTGGTCAAGGAAAACGAGATTTTGGCTTCGTCCATTTTGCTGAAAGGGCAAGTGCACTGAAGGCTGTCAAAGACACTGAGAAATATGAAATTGATGGTCATCCACTGGAAGTTGTCCTTGCGAAGCCTCAGACTGAGAAGAAACCTGATGGGGCTTATCCGTACAATGCCGGGCCTCATGCAAGCCACCTTGCACGCCCAGGGTATGGTGGTGGTTATGGCGGAAATCCATACGGCTCAGTGGGGGCTGGATATGGTGTTGCTGCAGGCTTTCAGCAGCCAATGATATATGGTAGAGGGCCAATGCCTGCGGGAATGCACATGGTGCCTATGGTTTTACCGGATGGTCGAATTGGCTATGTACTTCAGCAGCCTGGTGTACAGATGCCAACTCCACGACCTCGAAGAGCAGATCGGAGCAATGGTCCAGGCAGTGGACGAGGTGGCGGCGGCAGTGAGGAAGGCAACCGTGGTGGCAGAAGGTACCGACCATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0001101 GO:0002376 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009909 GO:0009987 GO:0010033 GO:0010439 GO:0010453 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010675 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0031399 GO:0032268 GO:0032269 GO:0032870 GO:0032991 GO:0033043 GO:0033044 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0042742 GO:0042762 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043487 GO:0043488 GO:0043489 GO:0043565 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045595 GO:0045824 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048831 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061013 GO:0061085 GO:0062012 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071229 GO:0071310 GO:0071345 GO:0071346 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0097452 GO:0098542 GO:1900376 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902275 GO:1902369 GO:1902373 GO:1902464 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903508 GO:1905933 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

482

Amino Acids

52.91

Weight (kDa)

5.07

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 108 - 178 1.1e-22 RNA recognition motif
RRM_1 PF00076 188 - 255 5.1e-08 RNA recognition motif
RRM_1 PF00076 283 - 352 7.1e-15 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
Acc65I GGTACC 1 cut(s) 1431
AccB1I GGYRCC 2 cut(s) 1273, 1431
AccB7I CCANNNNNTGG 2 cut(s) 1154, 1382
AccBSI CCGCTC 1 cut(s) 14
AciI CCGC 5 cut(s) 14, 1170, 1259, 1395, 1398
AclWI GGATC 6 cut(s) 42, 152, 378, 656, 669, 794
AcsI RAATTY 3 cut(s) 224, 751, 757
AcuI CTGAAG 4 cut(s) 339, 911, 1028, 1298
AcvI CACGTG 1 cut(s) 152
AdeI CACNNNGTG 1 cut(s) 1273
AfaI GTAC 5 cut(s) 811, 1112, 1311, 1329, 1433
AfiI CCNNNNNNNGG 5 cut(s) 311, 312, 947, 1154, 1382
AflII CTTAAG 1 cut(s) 529
AgsI TTSAA 6 cut(s) 143, 494, 517, 650, 735, 756
AjnI CCWGG 6 cut(s) 631, 791, 940, 1147, 1321, 1375
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
AleI CACNNNNGTG 1 cut(s) 912
AluBI AGCT 4 cut(s) 177, 766, 833, 889
AluI AGCT 4 cut(s) 177, 766, 833, 889
Alw21I GWGCWC 2 cut(s) 645, 1006
Alw44I GTGCAC 1 cut(s) 1002
AlwI GGATC 6 cut(s) 42, 152, 378, 656, 669, 794
AoxI GGCC 2 cut(s) 1121, 1247
ApaLI GTGCAC 1 cut(s) 1002
ApeKI GCWGC 6 cut(s) 146, 827, 830, 1211, 1225, 1318
ApoI RAATTY 3 cut(s) 224, 751, 757
AseI ATTAAT 1 cut(s) 410
Asp718I GGTACC 1 cut(s) 1431
AspLEI GCGC 1 cut(s) 725
AspS9I GGNCC 5 cut(s) 25, 629, 1121, 1247, 1373
AsuC2I CCSGG 2 cut(s) 29, 1120
AsuHPI GGTGA 5 cut(s) 179, 233, 443, 850, 926
AvaII GGWCC 3 cut(s) 25, 629, 1373
BaeGI GKGCMC 1 cut(s) 1006
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 2 cut(s) 1273, 1431
BbrPI CACGTG 1 cut(s) 152
Bbv12I GWGCWC 2 cut(s) 645, 1006
BbvI GCAGC 6 cut(s) 158, 814, 842, 1198, 1237, 1330
BccI CCATC 8 cut(s) 58, 92, 101, 230, 764, 1037, 1091, 1286
BceAI ACGGC 1 cut(s) 1198
BciT130I CCWGG 6 cut(s) 633, 793, 942, 1149, 1323, 1377
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 2 cut(s) 29, 1120
BfaI CTAG 3 cut(s) 174, 876, 1444
BfmI CTRYAG 2 cut(s) 828, 1212
BfrI CTTAAG 1 cut(s) 529
BglII AGATCT 1 cut(s) 361
BisI GCNGC 8 cut(s) 147, 828, 831, 1212, 1226, 1319, 1396, 1399
BlsI GCNGC 8 cut(s) 148, 829, 832, 1213, 1227, 1320, 1397, 1400
BmcAI AGTACT 1 cut(s) 811
Bme1390I CCNGG 8 cut(s) 29, 633, 793, 942, 1120, 1149, 1323, 1377
Bme18I GGWCC 3 cut(s) 25, 629, 1373
BmgT120I GGNCC 5 cut(s) 25, 629, 1121, 1247, 1373
BmiI GGNNCC 3 cut(s) 663, 1275, 1433
BmrFI CCNGG 8 cut(s) 29, 633, 793, 942, 1120, 1149, 1323, 1377
BmsI GCATC 1 cut(s) 1323
Bpu10I CCTNAGC 1 cut(s) 834
BpuMI CCSGG 2 cut(s) 29, 1120
BsaAI YACGTR 1 cut(s) 152
BsaBI GATNNNNATC 1 cut(s) 1047
BsaJI CCNNGG 6 cut(s) 632, 792, 910, 1147, 1148, 1417
BsaWI WCCGGW 1 cut(s) 1288
BsaXI ACNNNNNCTCC 3 cut(s) 33, 1357, 1387
Bsc4I CCNNNNNNNGG 5 cut(s) 311, 312, 947, 1154, 1382
Bse1I ACTGG 2 cut(s) 433, 1059
Bse3DI GCAATG 1 cut(s) 1375
Bse8I GATNNNNATC 1 cut(s) 1047
BseBI CCWGG 6 cut(s) 633, 793, 942, 1149, 1323, 1377
BseDI CCNNGG 6 cut(s) 632, 792, 910, 1147, 1148, 1417
BseGI GGATG 5 cut(s) 46, 604, 775, 1048, 1297
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 5 cut(s) 311, 312, 947, 1154, 1382
BseMI GCAATG 1 cut(s) 1375
BseMII CTCAG 9 cut(s) 356, 585, 848, 858, 873, 1017, 1074, 1091, 1200
BseNI ACTGG 2 cut(s) 433, 1059
BseRI GAGGAG 2 cut(s) 146, 284
BseSI GKGCMC 1 cut(s) 1006
BseXI GCAGC 6 cut(s) 158, 814, 842, 1198, 1237, 1330
BshFI GGCC 2 cut(s) 1123, 1249
BshNI GGYRCC 2 cut(s) 1273, 1431
BsiHKAI GWGCWC 2 cut(s) 645, 1006
BsiSI CCGG 3 cut(s) 28, 1119, 1289
BslI CCNNNNNNNGG 5 cut(s) 311, 312, 947, 1154, 1382
BsmI GAATGC 1 cut(s) 1269
BsnI GGCC 2 cut(s) 1123, 1249
Bsp1286I GDGCHC 2 cut(s) 645, 1006
Bsp1407I TGTACA 1 cut(s) 1327
Bsp143I GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
Bsp19I CCATGG 1 cut(s) 910
BspACI CCGC 5 cut(s) 14, 1170, 1259, 1395, 1398
BspANI GGCC 2 cut(s) 1123, 1249
BspCNI CTCAG 9 cut(s) 357, 586, 847, 859, 874, 1018, 1075, 1090, 1199
BspLI GGNNCC 3 cut(s) 663, 1275, 1433
BspMAI CTGCAG 2 cut(s) 832, 1216
BspPI GGATC 6 cut(s) 42, 152, 378, 656, 669, 794
BspQI GCTCTTC 1 cut(s) 1348
BspT107I GGYRCC 2 cut(s) 1273, 1431
BspTI CTTAAG 1 cut(s) 529
BsrBI CCGCTC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 1375
BsrGI TGTACA 1 cut(s) 1327
BsrI ACTGG 2 cut(s) 433, 1059
BssECI CCNNGG 6 cut(s) 632, 792, 910, 1147, 1148, 1417
BssMI GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
BssT1I CCWWGG 1 cut(s) 910
Bst2UI CCWGG 6 cut(s) 633, 793, 942, 1149, 1323, 1377
Bst4CI ACNGT 2 cut(s) 787, 1418
Bst6I CTCTTC 4 cut(s) 54, 261, 489, 1348
BstAFI CTTAAG 1 cut(s) 529
BstAPI GCANNNNNTGC 1 cut(s) 1273
BstAUI TGTACA 1 cut(s) 1327
BstBAI YACGTR 1 cut(s) 152
BstC8I GCNNGC 6 cut(s) 285, 721, 1132, 1144, 1216, 1257
BstDSI CCRYGG 2 cut(s) 910, 1417
BstENI CCTNNNNNAGG 1 cut(s) 945
BstF5I GGATG 5 cut(s) 46, 604, 775, 1048, 1297
BstHHI GCGC 1 cut(s) 725
BstKTI GATC 9 cut(s) 37, 160, 187, 364, 373, 664, 802, 820, 1363
BstMBI GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
BstMWI GCNNNNNNNGC 5 cut(s) 11, 485, 995, 1010, 1273
BstNI CCWGG 6 cut(s) 633, 793, 942, 1149, 1323, 1377
BstNSI RCATGY 2 cut(s) 140, 287
BstSCI CCNGG 8 cut(s) 27, 631, 791, 940, 1118, 1147, 1321, 1375
BstSFI CTRYAG 2 cut(s) 828, 1212
BstSLI GKGCMC 1 cut(s) 1006
BstV1I GCAGC 6 cut(s) 158, 814, 842, 1198, 1237, 1330
BstX2I RGATCY 6 cut(s) 34, 157, 361, 370, 661, 799
BstXI CCANNNNNNTGG 3 cut(s) 218, 588, 911
BstYI RGATCY 6 cut(s) 34, 157, 361, 370, 661, 799
BsuRI GGCC 2 cut(s) 1123, 1249
BtgI CCRYGG 2 cut(s) 910, 1417
BtsCI GGATG 5 cut(s) 46, 604, 775, 1048, 1297
BtsI GCAGTG 3 cut(s) 121, 1387, 1408
BtsIMutI CAGTG 8 cut(s) 121, 879, 1004, 1023, 1052, 1194, 1387, 1408
Cac8I GCNNGC 6 cut(s) 285, 721, 1132, 1144, 1216, 1257
CfoI GCGC 1 cut(s) 725
Cfr13I GGNCC 5 cut(s) 25, 629, 1121, 1247, 1373
Csp6I GTAC 5 cut(s) 810, 1111, 1310, 1328, 1432
CspCI CAANNNNNGTGG 2 cut(s) 1402, 1437
CviAII CATG 6 cut(s) 55, 137, 284, 911, 1127, 1270
CviQI GTAC 5 cut(s) 810, 1111, 1310, 1328, 1432
DpnI GATC 9 cut(s) 36, 159, 186, 363, 372, 663, 801, 819, 1362
DpnII GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
DraIII CACNNNGTG 1 cut(s) 1273
Eam1104I CTCTTC 4 cut(s) 54, 261, 489, 1348
EarI CTCTTC 4 cut(s) 54, 261, 489, 1348
EciI GGCGGA 1 cut(s) 1185
Eco130I CCWWGG 1 cut(s) 910
Eco47I GGWCC 3 cut(s) 25, 629, 1373
Eco57I CTGAAG 4 cut(s) 339, 911, 1028, 1298
Eco72I CACGTG 1 cut(s) 152
EcoNI CCTNNNNNAGG 1 cut(s) 945
EcoRI GAATTC 1 cut(s) 751
EcoRII CCWGG 6 cut(s) 631, 791, 940, 1147, 1321, 1375
EcoT14I CCWWGG 1 cut(s) 910
EcoT22I ATGCAT 1 cut(s) 451
ErhI CCWWGG 1 cut(s) 910
FaeI CATG 6 cut(s) 58, 140, 287, 914, 1130, 1273
FalI AAGNNNNNCTT 2 cut(s) 1050, 1082
FatI CATG 6 cut(s) 54, 136, 283, 910, 1126, 1269
FauI CCCGC 1 cut(s) 1252
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 8 cut(s) 147, 828, 831, 1212, 1226, 1319, 1396, 1399
FokI GGATG 5 cut(s) 53, 611, 782, 1035, 1304
Fsp4HI GCNGC 8 cut(s) 147, 828, 831, 1212, 1226, 1319, 1396, 1399
FspBI CTAG 3 cut(s) 174, 876, 1444
GlaI GCGC 1 cut(s) 724
GluI GCNGC 8 cut(s) 147, 828, 831, 1212, 1226, 1319, 1396, 1399
HaeIII GGCC 2 cut(s) 1123, 1249
HapII CCGG 3 cut(s) 28, 1119, 1289
HhaI GCGC 1 cut(s) 725
Hin1II CATG 6 cut(s) 58, 140, 287, 914, 1130, 1273
Hin6I GCGC 1 cut(s) 723
HinP1I GCGC 1 cut(s) 723
HpaII CCGG 3 cut(s) 28, 1119, 1289
HphI GGTGA 5 cut(s) 179, 233, 443, 850, 926
Hpy166II GTNNAC 5 cut(s) 335, 539, 1004, 1328, 1385
Hpy188I TCNGA 6 cut(s) 319, 355, 366, 547, 1080, 1365
Hpy188III TCNNGA 4 cut(s) 38, 589, 735, 815
Hpy8I GTNNAC 5 cut(s) 335, 539, 1004, 1328, 1385
HpyAV CCTTC 7 cut(s) 258, 311, 835, 886, 1003, 1403, 1422
HpyCH4III ACNGT 2 cut(s) 787, 1418
HpyCH4IV ACGT 2 cut(s) 151, 645
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 485, 995, 1010, 1273
HpySE526I ACGT 2 cut(s) 151, 645
Hsp92II CATG 6 cut(s) 58, 140, 287, 914, 1130, 1273
HspAI GCGC 1 cut(s) 723
KpnI GGTACC 1 cut(s) 1435
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
LguI GCTCTTC 1 cut(s) 1348
LmnI GCTCC 3 cut(s) 11, 133, 1365
Lsp1109I GCAGC 6 cut(s) 158, 814, 842, 1198, 1237, 1330
LweI GCATC 1 cut(s) 1323
MaeI CTAG 3 cut(s) 174, 876, 1444
MaeII ACGT 2 cut(s) 151, 645
MaeIII GTNAC 2 cut(s) 787, 919
MalI GATC 9 cut(s) 36, 159, 186, 363, 372, 663, 801, 819, 1362
MbiI CCGCTC 1 cut(s) 14
MboI GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
MflI RGATCY 6 cut(s) 34, 157, 361, 370, 661, 799
MhlI GDGCHC 2 cut(s) 645, 1006
MluCI AATT 6 cut(s) 224, 393, 751, 757, 1038, 1299
Mph1103I ATGCAT 1 cut(s) 451
MseI TTAA 4 cut(s) 410, 462, 530, 762
MslI CAYNNNNRTG 1 cut(s) 912
MspCI CTTAAG 1 cut(s) 529
MspI CCGG 3 cut(s) 28, 1119, 1289
MspR9I CCNGG 8 cut(s) 29, 633, 793, 942, 1120, 1149, 1323, 1377
Mva1269I GAATGC 1 cut(s) 1269
MvaI CCWGG 6 cut(s) 633, 793, 942, 1149, 1323, 1377
MwoI GCNNNNNNNGC 5 cut(s) 11, 485, 995, 1010, 1273
NciI CCSGG 2 cut(s) 29, 1120
NcoI CCATGG 1 cut(s) 910
NdeII GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
NlaIII CATG 6 cut(s) 58, 140, 287, 914, 1130, 1273
NlaIV GGNNCC 3 cut(s) 663, 1275, 1433
NmuCI GTSAC 1 cut(s) 919
NsiI ATGCAT 1 cut(s) 451
NspI RCATGY 2 cut(s) 140, 287
OliI CACNNNNGTG 1 cut(s) 912
PaeI GCATGC 1 cut(s) 287
PasI CCCWGGG 1 cut(s) 1148
PciSI GCTCTTC 1 cut(s) 1348
PctI GAATGC 1 cut(s) 1269
PflMI CCANNNNNTGG 2 cut(s) 1154, 1382
PkrI GCNGC 8 cut(s) 148, 829, 832, 1213, 1227, 1320, 1397, 1400
PmaCI CACGTG 1 cut(s) 152
PmlI CACGTG 1 cut(s) 152
Ppu21I YACGTR 1 cut(s) 152
PshBI ATTAAT 1 cut(s) 410
PsiI TTATAA 1 cut(s) 711
Psp6I CCWGG 6 cut(s) 631, 791, 940, 1147, 1321, 1375
PspCI CACGTG 1 cut(s) 152
PspGI CCWGG 6 cut(s) 631, 791, 940, 1147, 1321, 1375
PspN4I GGNNCC 3 cut(s) 663, 1275, 1433
PspPI GGNCC 5 cut(s) 25, 629, 1121, 1247, 1373
PstI CTGCAG 2 cut(s) 832, 1216
PsuI RGATCY 6 cut(s) 34, 157, 361, 370, 661, 799
RsaI GTAC 5 cut(s) 811, 1112, 1311, 1329, 1433
RsaNI GTAC 5 cut(s) 810, 1111, 1310, 1328, 1432
RseI CAYNNNNRTG 1 cut(s) 912
SapI GCTCTTC 1 cut(s) 1348
SaqAI TTAA 4 cut(s) 410, 462, 530, 762
SatI GCNGC 8 cut(s) 147, 828, 831, 1212, 1226, 1319, 1396, 1399
Sau3AI GATC 9 cut(s) 34, 157, 184, 361, 370, 661, 799, 817, 1360
Sau96I GGNCC 5 cut(s) 25, 629, 1121, 1247, 1373
ScaI AGTACT 1 cut(s) 811
ScrFI CCNGG 8 cut(s) 29, 633, 793, 942, 1120, 1149, 1323, 1377
SduI GDGCHC 2 cut(s) 645, 1006
SfaNI GCATC 1 cut(s) 1323
SfcI CTRYAG 2 cut(s) 828, 1212
SinI GGWCC 3 cut(s) 25, 629, 1373
SmiMI CAYNNNNRTG 1 cut(s) 912
SmlI CTYRAG 1 cut(s) 529
SmoI CTYRAG 1 cut(s) 529
SphI GCATGC 1 cut(s) 287
Sse9I AATT 6 cut(s) 224, 393, 751, 757, 1038, 1299
SsiI CCGC 5 cut(s) 14, 1170, 1259, 1395, 1398
SspMI CTAG 3 cut(s) 174, 876, 1444
StyD4I CCNGG 8 cut(s) 27, 631, 791, 940, 1118, 1147, 1321, 1375
StyI CCWWGG 1 cut(s) 910
TaaI ACNGT 2 cut(s) 787, 1418
TaiI ACGT 2 cut(s) 154, 648
TaqI TCGA 3 cut(s) 749, 1297, 1351
TasI AATT 6 cut(s) 224, 393, 751, 757, 1038, 1299
TatI WGTACW 3 cut(s) 809, 1309, 1327
TauI GCSGC 2 cut(s) 1398, 1401
Tru1I TTAA 4 cut(s) 410, 462, 530, 762
Tru9I TTAA 4 cut(s) 410, 462, 530, 762
TscAI CASTG 8 cut(s) 121, 886, 1011, 1030, 1059, 1194, 1387, 1408
TseFI GTSAC 1 cut(s) 919
TseI GCWGC 6 cut(s) 146, 827, 830, 1211, 1225, 1318
Tsp45I GTSAC 1 cut(s) 919
TspDTI ATGAA 9 cut(s) 43, 108, 135, 219, 279, 316, 396, 556, 1050
TspGWI ACGGA 1 cut(s) 1098
TspRI CASTG 8 cut(s) 121, 886, 1011, 1030, 1059, 1194, 1387, 1408
Van91I CCANNNNNTGG 2 cut(s) 1154, 1382
Vha464I CTTAAG 1 cut(s) 529
VneI GTGCAC 1 cut(s) 1002
VpaK11BI GGWCC 3 cut(s) 25, 629, 1373
VspI ATTAAT 1 cut(s) 410
XagI CCTNNNNNAGG 1 cut(s) 945
XapI RAATTY 3 cut(s) 224, 751, 757
XceI RCATGY 2 cut(s) 140, 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 789
XspI CTAG 3 cut(s) 174, 876, 1444
ZrmI AGTACT 1 cut(s) 811
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.