RLG00000027770

Heterogeneous nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0003819
Physical Location & Seq
Forward (+)
15003208 .. 15007668
4461 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027770

Sequence Viewer

Length: 1584 bp
ATGACGTGGCACATTATTATTGGCCAGAAAGAAACTGGCGCACAAGATTCACATGTAAGCGCACACAGAGGAGAAATACACAGACTACGCGAAAACAGAGACACCCAAAAACCAAATCTCTCTGCTTCCATAACTGACATGGCTGAAGGAGCGGAAGTTGATGAGCGGGTGGATCTAGATGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACAAGCAGATGAAGATGGAGCTGATGGAGGCAGTGATGAAAATGTGGAGGAACATGCTGAAGAAGCAGAGGAACATCCTACAACTGGGGCTAGCGAGAAAGAGCATTCTCCAGAACCATATGGAAGCGAAAACGGTGGTGAGTTGGTGGAAGATGAAGAGAAACCTTCTGCTTCTCTCAGTCAGGAGGAGAAAGAGAAGCATGCTCAACTGCTTGCCCTTCCTCCTTATGGGTCTGAAGTTTTCATTGGTGGCCTTCCTAAAGATGCCTCAGAAGAAGAGTTGAGGGAGCTATGCAGTGAAATAGGCGAAATTCTTGAGATAAGATTAATGCAAGACAGGGAAACTGGTGAGAGCAAAGGTTATGCATTCATAGGATTCAAGTCTAAAGAGGTTGCACAAACGGCTATTGAAGAATTACATAATAAAGCATTTAAGGGTAAGACTTTAAGATGTTCACTTTCTGAAACAAAACATAGACTGTTCATTGGTAATGTTCCAAAAATCTGGACCGAGGATGAGTTTCGAAAAGTTATTGAAGAGGTTGGTCCTGGAGTTGAGCACATTGAGCTGATAAAGGATCCTCAAAATCCAAGTAGAAATCGCGGTTTTGCTTTTGTTTTGTATTACAACAATGCCTGCGCTGATTATTCAAGACAAAAAATGTCAAATTCAAGTTTTAAGCTGGAGGGAAATACCCCAACTGTGACCTGGGCTGATCCAAAAAGTACATCTGATCACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATTCCTGAGAACACTAGCACTGAAACGCTGAAGGAAATATTCCAGCGCCATGGTGAAGTGATAAAAGTAGTTATGCCACCTGGCAAAGGTGGTCAAGGCAAACGGGATTTTGGATTTGTACACTATGCTGAAAGGTCTAGTGCTCTGAAGGCTGTTAAAGATAGTGAGAAATATGAAATTGATGGCCATCCACTAGAGGTTGTTCTTGCGAAGCCTCAGACTGATAAAAAATCTGATGGGGCTTATCCCTACAATGCTGGGCCTCACACAAATCATGCTCCACACCCAGGTTATGGTGGGTTTGCTGGAAATCCATACGGCTCTGCAGGCGCTGGATTTGGTGTTGCCCCAGCATTTCAGCAGCCAATGATATATGGTAGAGGGCCAATGCCATCAGGAATGCAGATGGTGCCAATGGTTCTACCAGATGGTCGAATAGGCTATGTTCTTCAGCAGCCTGGGGTACAGATGCCACCTCCTCGGCCTCGAAGAGGGGATCGAAACAATGGTCCGAGTGGACAACCAGGGAGAGGAGGTGGTAGCAGCGATGAAGGCAATCGTGGCAGGAGATACCGGCCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0001101 GO:0002376 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009909 GO:0009987 GO:0010033 GO:0010439 GO:0010453 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010675 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0031399 GO:0032268 GO:0032269 GO:0032870 GO:0032991 GO:0033043 GO:0033044 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0042742 GO:0042762 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043487 GO:0043488 GO:0043489 GO:0043565 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045595 GO:0045824 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048831 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061013 GO:0061085 GO:0062012 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071229 GO:0071310 GO:0071345 GO:0071346 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0097452 GO:0098542 GO:1900376 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902275 GO:1902369 GO:1902373 GO:1902464 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903508 GO:1905933 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

528

Amino Acids

58.03

Weight (kDa)

5.08

Isoelectric Point (pI)

45.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 154 - 224 3.3e-22 RNA recognition motif
RRM_1 PF00076 234 - 300 1.3e-08 RNA recognition motif
RRM_1 PF00076 329 - 398 2e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1408
AccB7I CCANNNNNTGG 1 cut(s) 1292
AccBSI CCGCTC 2 cut(s) 152, 166
AccII CGCG 2 cut(s) 90, 825
AciI CCGC 3 cut(s) 152, 166, 825
AclWI GGATC 5 cut(s) 180, 794, 807, 932, 1503
AcoI YGGCCR 2 cut(s) 22, 1183
AcsI RAATTY 2 cut(s) 531, 889
AcuI CTGAAG 6 cut(s) 165, 300, 477, 1049, 1166, 1433
AfaI GTAC 3 cut(s) 949, 1119, 1464
AfiI CCNNNNNNNGG 7 cut(s) 305, 449, 1085, 1286, 1292, 1490, 1529
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 5 cut(s) 601, 632, 758, 873, 894
AjiI CACGTC 1 cut(s) 6
AjnI CCWGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
AjuI GAANNNNNNNTTGG 2 cut(s) 450, 482
AluBI AGCT 4 cut(s) 242, 511, 790, 904
AluI AGCT 4 cut(s) 242, 511, 790, 904
Alw21I GWGCWC 2 cut(s) 783, 1144
Alw26I GTCTC 1 cut(s) 93
AlwI GGATC 5 cut(s) 180, 794, 807, 932, 1503
AlwNI CAGNNNCTG 1 cut(s) 1331
AoxI GGCC 7 cut(s) 22, 472, 1183, 1259, 1382, 1481, 1574
ApeKI GCWGC 5 cut(s) 965, 968, 1360, 1453, 1542
ApoI RAATTY 2 cut(s) 531, 889
ArsI GACNNNNNNTTYG 2 cut(s) 1492, 1524
AseI ATTAAT 1 cut(s) 548
AspLEI GCGC 5 cut(s) 41, 62, 863, 1047, 1331
AspS9I GGNCC 5 cut(s) 729, 767, 1259, 1382, 1508
AsuHPI GGTGA 4 cut(s) 371, 581, 988, 1064
AsuII TTCGAA 1 cut(s) 745
AsuNHI GCTAGC 1 cut(s) 311
AvaII GGWCC 3 cut(s) 729, 767, 1508
BalI TGGCCA 2 cut(s) 24, 1185
BamHI GGATCC 1 cut(s) 799
BanI GGYRCC 1 cut(s) 1408
Bbv12I GWGCWC 2 cut(s) 783, 1144
BbvI GCAGC 5 cut(s) 952, 955, 1372, 1465, 1554
BccI CCATC 9 cut(s) 196, 230, 239, 1175, 1194, 1229, 1399, 1399, 1421
BceAI ACGGC 2 cut(s) 639, 1333
BciT130I CCWGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
BclI TGATCA 1 cut(s) 955
BcoDI GTCTC 1 cut(s) 93
BfaI CTAG 5 cut(s) 176, 312, 1014, 1137, 1193
BfmI CTRYAG 1 cut(s) 1323
BfoI RGCGCY 2 cut(s) 1048, 1332
BisI GCNGC 5 cut(s) 966, 969, 1361, 1454, 1543
BlsI GCNGC 5 cut(s) 967, 970, 1362, 1455, 1544
Bme1390I CCNGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
Bme18I GGWCC 3 cut(s) 729, 767, 1508
BmgBI CACGTC 1 cut(s) 6
BmgT120I GGNCC 5 cut(s) 729, 767, 1259, 1382, 1508
BmiI GGNNCC 2 cut(s) 801, 1410
BmrFI CCNGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
BmrI ACTGGG 1 cut(s) 315
BmsI GCATC 2 cut(s) 475, 1458
BmtI GCTAGC 1 cut(s) 315
BmuI ACTGGG 1 cut(s) 315
BpmI CTGGAG 3 cut(s) 315, 792, 926
Bpu10I CCTNAGC 1 cut(s) 972
Bpu14I TTCGAA 1 cut(s) 745
BpuEI CTTGAG 1 cut(s) 557
BsaBI GATNNNNATC 1 cut(s) 1185
BsaJI CCNNGG 7 cut(s) 732, 930, 1048, 1285, 1457, 1478, 1523
BsaXI ACNNNNNCTCC 4 cut(s) 141, 171, 1519, 1549
Bsc4I CCNNNNNNNGG 7 cut(s) 305, 449, 1085, 1286, 1292, 1490, 1529
Bse118I RCCGGY 1 cut(s) 1572
Bse1I ACTGG 3 cut(s) 40, 310, 571
Bse8I GATNNNNATC 1 cut(s) 1185
BseBI CCWGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
BseDI CCNNGG 7 cut(s) 732, 930, 1048, 1285, 1457, 1478, 1523
BseGI GGATG 4 cut(s) 211, 295, 742, 1186
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 7 cut(s) 305, 449, 1085, 1286, 1292, 1490, 1529
BseMII CTCAG 5 cut(s) 412, 504, 986, 996, 1229
BseNI ACTGG 3 cut(s) 40, 310, 571
BseRI GAGGAG 4 cut(s) 84, 422, 1467, 1545
BseXI GCAGC 5 cut(s) 952, 955, 1372, 1465, 1554
BseYI CCCAGC 2 cut(s) 1256, 1348
Bsh1236I CGCG 2 cut(s) 90, 825
BshFI GGCC 7 cut(s) 24, 474, 1185, 1261, 1384, 1483, 1576
BshNI GGYRCC 1 cut(s) 1408
BsiHKAI GWGCWC 2 cut(s) 783, 1144
BsiSI CCGG 1 cut(s) 1573
BslI CCNNNNNNNGG 7 cut(s) 305, 449, 1085, 1286, 1292, 1490, 1529
BsmAI GTCTC 1 cut(s) 93
BsmI GAATGC 3 cut(s) 325, 587, 1404
BsnI GGCC 7 cut(s) 24, 474, 1185, 1261, 1384, 1483, 1576
Bsp119I TTCGAA 1 cut(s) 745
Bsp1286I GDGCHC 2 cut(s) 783, 1144
Bsp1407I TGTACA 1 cut(s) 1117
Bsp143I GATC 5 cut(s) 172, 799, 937, 955, 1495
Bsp19I CCATGG 1 cut(s) 1048
BspACI CCGC 3 cut(s) 152, 166, 825
BspANI GGCC 7 cut(s) 24, 474, 1185, 1261, 1384, 1483, 1576
BspCNI CTCAG 5 cut(s) 411, 503, 985, 997, 1228
BspFNI CGCG 2 cut(s) 90, 825
BspLI GGNNCC 2 cut(s) 801, 1410
BspMAI CTGCAG 1 cut(s) 1327
BspOI GCTAGC 1 cut(s) 315
BspPI GGATC 5 cut(s) 180, 794, 807, 932, 1503
BspT104I TTCGAA 1 cut(s) 745
BspT107I GGYRCC 1 cut(s) 1408
BsrBI CCGCTC 2 cut(s) 152, 166
BsrFI RCCGGY 1 cut(s) 1572
BsrGI TGTACA 1 cut(s) 1117
BsrI ACTGG 3 cut(s) 40, 310, 571
BssAI RCCGGY 1 cut(s) 1572
BssECI CCNNGG 7 cut(s) 732, 930, 1048, 1285, 1457, 1478, 1523
BssMI GATC 5 cut(s) 172, 799, 937, 955, 1495
BssT1I CCWWGG 1 cut(s) 1048
Bst2UI CCWGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
Bst4CI ACNGT 3 cut(s) 356, 702, 925
Bst6I CTCTTC 5 cut(s) 192, 372, 492, 753, 1483
BstAPI GCANNNNNTGC 1 cut(s) 1408
BstAUI TGTACA 1 cut(s) 1117
BstBI TTCGAA 1 cut(s) 745
BstC8I GCNNGC 5 cut(s) 313, 423, 435, 859, 1327
BstDEI CTNAG 5 cut(s) 398, 490, 972, 1005, 1215
BstDSI CCRYGG 1 cut(s) 1048
BstENI CCTNNNNNAGG 2 cut(s) 1083, 1488
BstF5I GGATG 4 cut(s) 211, 295, 742, 1186
BstFNI CGCG 2 cut(s) 90, 825
BstH2I RGCGCY 2 cut(s) 1048, 1332
BstHHI GCGC 5 cut(s) 41, 62, 863, 1047, 1331
BstKTI GATC 5 cut(s) 175, 802, 940, 958, 1498
BstMAI GTCTC 1 cut(s) 93
BstMBI GATC 5 cut(s) 172, 799, 937, 955, 1495
BstMWI GCNNNNNNNGC 9 cut(s) 149, 284, 623, 787, 1148, 1326, 1408, 1551, 1560
BstNI CCWGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
BstNSI RCATGY 3 cut(s) 56, 278, 425
BstSCI CCNGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
BstSFI CTRYAG 1 cut(s) 1323
BstUI CGCG 2 cut(s) 90, 825
BstV1I GCAGC 5 cut(s) 952, 955, 1372, 1465, 1554
BstX2I RGATCY 2 cut(s) 172, 799
BstXI CCANNNNNNTGG 2 cut(s) 726, 1049
BstYI RGATCY 2 cut(s) 172, 799
BsuRI GGCC 7 cut(s) 24, 474, 1185, 1261, 1384, 1483, 1576
BtgI CCRYGG 1 cut(s) 1048
BtgZI GCGATG 1 cut(s) 1560
BtrI CACGTC 1 cut(s) 6
BtsCI GGATG 4 cut(s) 211, 295, 742, 1186
BtsI GCAGTG 2 cut(s) 259, 523
BtsIMutI CAGTG 3 cut(s) 259, 523, 1017
Cac8I GCNNGC 5 cut(s) 313, 423, 435, 859, 1327
CaiI CAGNNNCTG 1 cut(s) 1331
CfoI GCGC 5 cut(s) 41, 62, 863, 1047, 1331
Cfr10I RCCGGY 1 cut(s) 1572
Cfr13I GGNCC 5 cut(s) 729, 767, 1259, 1382, 1508
Csp6I GTAC 3 cut(s) 948, 1118, 1463
CviAII CATG 7 cut(s) 53, 139, 193, 275, 422, 1049, 1274
CviQI GTAC 3 cut(s) 948, 1118, 1463
DdeI CTNAG 5 cut(s) 398, 490, 972, 1005, 1215
DpnI GATC 5 cut(s) 174, 801, 939, 957, 1497
DpnII GATC 5 cut(s) 172, 799, 937, 955, 1495
EaeI YGGCCR 2 cut(s) 22, 1183
Eam1104I CTCTTC 5 cut(s) 192, 372, 492, 753, 1483
EarI CTCTTC 5 cut(s) 192, 372, 492, 753, 1483
Eco130I CCWWGG 1 cut(s) 1048
Eco47I GGWCC 3 cut(s) 729, 767, 1508
Eco57I CTGAAG 6 cut(s) 165, 300, 477, 1049, 1166, 1433
EcoNI CCTNNNNNAGG 2 cut(s) 1083, 1488
EcoRII CCWGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
EcoT14I CCWWGG 1 cut(s) 1048
EcoT22I ATGCAT 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 1048
FaeI CATG 7 cut(s) 56, 142, 196, 278, 425, 1052, 1277
FatI CATG 7 cut(s) 52, 138, 192, 274, 421, 1048, 1273
FauI CCCGC 1 cut(s) 159
FauNDI CATATG 1 cut(s) 340
FbaI TGATCA 1 cut(s) 955
Fnu4HI GCNGC 5 cut(s) 966, 969, 1361, 1454, 1543
FokI GGATG 4 cut(s) 218, 282, 749, 1173
Fsp4HI GCNGC 5 cut(s) 966, 969, 1361, 1454, 1543
FspBI CTAG 5 cut(s) 176, 312, 1014, 1137, 1193
GlaI GCGC 5 cut(s) 40, 61, 862, 1046, 1330
GluI GCNGC 5 cut(s) 966, 969, 1361, 1454, 1543
GsaI CCCAGC 2 cut(s) 1260, 1352
GsuI CTGGAG 3 cut(s) 315, 792, 926
HaeII RGCGCY 2 cut(s) 1048, 1332
HaeIII GGCC 7 cut(s) 24, 474, 1185, 1261, 1384, 1483, 1576
HapII CCGG 1 cut(s) 1573
HhaI GCGC 5 cut(s) 41, 62, 863, 1047, 1331
Hin1II CATG 7 cut(s) 56, 142, 196, 278, 425, 1052, 1277
Hin6I GCGC 5 cut(s) 39, 60, 861, 1045, 1329
HinP1I GCGC 5 cut(s) 39, 60, 861, 1045, 1329
HinfI GANTC 2 cut(s) 47, 597
HpaII CCGG 1 cut(s) 1573
HphI GGTGA 4 cut(s) 371, 581, 988, 1064
Hpy166II GTNNAC 3 cut(s) 677, 1120, 1517
Hpy188I TCNGA 8 cut(s) 457, 493, 685, 955, 1146, 1218, 1234, 1512
Hpy188III TCNNGA 8 cut(s) 176, 332, 404, 536, 727, 873, 1004, 1395
Hpy8I GTNNAC 3 cut(s) 677, 1120, 1517
HpyAV CCTTC 8 cut(s) 140, 396, 449, 485, 973, 1024, 1141, 1544
HpyCH4III ACNGT 3 cut(s) 356, 702, 925
HpyCH4IV ACGT 1 cut(s) 5
HpyCH4V TGCA 6 cut(s) 516, 553, 587, 617, 1325, 1402
HpyF10VI GCNNNNNNNGC 9 cut(s) 149, 284, 623, 787, 1148, 1326, 1408, 1551, 1560
HpyF3I CTNAG 5 cut(s) 398, 490, 972, 1005, 1215
HpySE526I ACGT 1 cut(s) 5
Hsp92II CATG 7 cut(s) 56, 142, 196, 278, 425, 1052, 1277
HspAI GCGC 5 cut(s) 39, 60, 861, 1045, 1329
Ksp22I TGATCA 1 cut(s) 955
Kzo9I GATC 5 cut(s) 172, 799, 937, 955, 1495
LmnI GCTCC 4 cut(s) 149, 239, 508, 1282
Lsp1109I GCAGC 5 cut(s) 952, 955, 1372, 1465, 1554
LweI GCATC 2 cut(s) 475, 1458
MaeI CTAG 5 cut(s) 176, 312, 1014, 1137, 1193
MaeII ACGT 1 cut(s) 5
MaeIII GTNAC 1 cut(s) 925
MalI GATC 5 cut(s) 174, 801, 939, 957, 1497
MbiI CCGCTC 2 cut(s) 152, 166
MboI GATC 5 cut(s) 172, 799, 937, 955, 1495
MflI RGATCY 2 cut(s) 172, 799
MhlI GDGCHC 2 cut(s) 783, 1144
MlsI TGGCCA 2 cut(s) 24, 1185
MluCI AATT 5 cut(s) 187, 531, 635, 889, 1176
MluNI TGGCCA 2 cut(s) 24, 1185
Mox20I TGGCCA 2 cut(s) 24, 1185
Mph1103I ATGCAT 1 cut(s) 589
MscI TGGCCA 2 cut(s) 24, 1185
MseI TTAA 5 cut(s) 548, 654, 668, 900, 1155
Msp20I TGGCCA 2 cut(s) 24, 1185
MspI CCGG 1 cut(s) 1573
MspR9I CCNGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
Mva1269I GAATGC 3 cut(s) 325, 587, 1404
MvaI CCWGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
MvnI CGCG 2 cut(s) 90, 825
MwoI GCNNNNNNNGC 9 cut(s) 149, 284, 623, 787, 1148, 1326, 1408, 1551, 1560
NcoI CCATGG 1 cut(s) 1048
NdeI CATATG 1 cut(s) 340
NdeII GATC 5 cut(s) 172, 799, 937, 955, 1495
NheI GCTAGC 1 cut(s) 311
NlaIII CATG 7 cut(s) 56, 142, 196, 278, 425, 1052, 1277
NlaIV GGNNCC 2 cut(s) 801, 1410
NmeAIII GCCGAG 1 cut(s) 1459
NmuCI GTSAC 1 cut(s) 925
NsiI ATGCAT 1 cut(s) 589
NspI RCATGY 3 cut(s) 56, 278, 425
NspV TTCGAA 1 cut(s) 745
PaeI GCATGC 1 cut(s) 425
PciI ACATGT 1 cut(s) 52
PctI GAATGC 3 cut(s) 325, 587, 1404
PfeI GAWTC 2 cut(s) 47, 597
PflMI CCANNNNNTGG 1 cut(s) 1292
PfoI TCCNGGA 1 cut(s) 769
PkrI GCNGC 5 cut(s) 967, 970, 1362, 1455, 1544
PscI ACATGT 1 cut(s) 52
PshBI ATTAAT 1 cut(s) 548
Psp6I CCWGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
PspFI CCCAGC 2 cut(s) 1256, 1348
PspGI CCWGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
PspN4I GGNNCC 2 cut(s) 801, 1410
PspPI GGNCC 5 cut(s) 729, 767, 1259, 1382, 1508
PstI CTGCAG 1 cut(s) 1327
PstNI CAGNNNCTG 1 cut(s) 1331
PsuI RGATCY 2 cut(s) 172, 799
RsaI GTAC 3 cut(s) 949, 1119, 1464
RsaNI GTAC 3 cut(s) 948, 1118, 1463
SaqAI TTAA 5 cut(s) 548, 654, 668, 900, 1155
SatI GCNGC 5 cut(s) 966, 969, 1361, 1454, 1543
Sau3AI GATC 5 cut(s) 172, 799, 937, 955, 1495
Sau96I GGNCC 5 cut(s) 729, 767, 1259, 1382, 1508
ScrFI CCNGG 6 cut(s) 771, 931, 1080, 1287, 1458, 1524
SduI GDGCHC 2 cut(s) 783, 1144
SfaNI GCATC 2 cut(s) 475, 1458
SfcI CTRYAG 1 cut(s) 1323
SfuI TTCGAA 1 cut(s) 745
SinI GGWCC 3 cut(s) 729, 767, 1508
SmlI CTYRAG 1 cut(s) 536
SmoI CTYRAG 1 cut(s) 536
SphI GCATGC 1 cut(s) 425
Sse9I AATT 5 cut(s) 187, 531, 635, 889, 1176
SsiI CCGC 3 cut(s) 152, 166, 825
SspI AATATT 1 cut(s) 1038
SspMI CTAG 5 cut(s) 176, 312, 1014, 1137, 1193
StyD4I CCNGG 6 cut(s) 769, 929, 1078, 1285, 1456, 1522
StyI CCWWGG 1 cut(s) 1048
TaaI ACNGT 3 cut(s) 356, 702, 925
TaiI ACGT 1 cut(s) 8
TaqI TCGA 4 cut(s) 745, 1432, 1486, 1498
TaqII GACCGA 1 cut(s) 746
TasI AATT 5 cut(s) 187, 531, 635, 889, 1176
TatI WGTACW 2 cut(s) 947, 1117
TfiI GAWTC 2 cut(s) 47, 597
Tru1I TTAA 5 cut(s) 548, 654, 668, 900, 1155
Tru9I TTAA 5 cut(s) 548, 654, 668, 900, 1155
TscAI CASTG 3 cut(s) 259, 523, 1024
TseFI GTSAC 1 cut(s) 925
TseI GCWGC 5 cut(s) 965, 968, 1360, 1453, 1542
Tsp45I GTSAC 1 cut(s) 925
TspDTI ATGAA 8 cut(s) 246, 273, 390, 454, 580, 694, 1188, 1563
TspRI CASTG 3 cut(s) 259, 523, 1024
Van91I CCANNNNNTGG 1 cut(s) 1292
VpaK11BI GGWCC 3 cut(s) 729, 767, 1508
VspI ATTAAT 1 cut(s) 548
XagI CCTNNNNNAGG 2 cut(s) 1083, 1488
XapI RAATTY 2 cut(s) 531, 889
XbaI TCTAGA 1 cut(s) 175
XceI RCATGY 3 cut(s) 56, 278, 425
XcmI CCANNNNNNNNNTGG 3 cut(s) 32, 136, 927
XspI CTAG 5 cut(s) 176, 312, 1014, 1137, 1193
Zsp2I ATGCAT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.