Rorug01G0283300

Heterogeneous nuclear ribonucleoprotein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003819
Physical Location & Seq
Forward (+)
39661764 .. 39668414
6651 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0283300.1

Sequence Viewer

Length: 1617 bp
ATGAATTGCCCGAGAAGTGTGTGGATAGTGGCGGCTGTGCTGGTGCTGAGTCTCGGTCTGAGCTCGGCTGGAGATATAGTTCATCATGATAATATTGCTCCCAAGAGACCTGGTTGTGAAAACGACTTCGTTCTGGTAAAGGTTCCGACTTGGATCAACGGTGTAGAAGCCGACGAGTATGTTGGTGTCGGGGCTCGATTTGGACCTACCCTGGAATCAAAGGAGAAGCATGCCAATAATACTAGAGTGGTTCTGGCAGACCCCCCTGATTGTTGTACCAAACCCAAGAATAAGCTTGCACGTGAGGTCATTTTGGTACACCGAGGAAATTGCAGTTTTACCACCAAGGCAAATATGGCTGAATCTGCTAATGCTTCAGCCATCCTCATCATAAATAACCGTCCAGAACTTTTCAAGATGGTTTGTGAAGACGACGAGCCTGATGTCGAGATAGGCATACCTGCTGTTATGCTTCCCAACAAAATTGGTGAAATCTTGGAAAATGGATTAACGAACAATTCCATAGTTTCTGTGCAGCTATACTCTCCATTGCGTCCACTGGTTGACATTGCAGAAGTATTTTTATGGCTTATGGCTGTGGGTACCATCTTATTTGCTTCTTATTGGTCTGCATGGACTGCAAGAGAAGCAGCTATTGAGCATGACAAGCTATTGAAGGATGCTTCTGACGAGTCTTCACATGTGGAAGGTGAAGGTGCCAGTCCTCTAGTGGAGATTAGCACCATGGCAGCAATTCTCTTTGTTGTGATTGCTTCATGCTTCTTGGTTATGTTTTACAAACTTATGTCCTTCTGGTTCATCGAGATTCTGGTGGTTTTGTTTTGCATTGGTGGGATAGAGGGCCTACAGACTTGCTTGGTGGCCTTGCTATCATGTTTCAGACGGTTTAAACGTGCTGGAGAATCATATGTTAAGGTGCCCTTCTTTGGAGCTGTTTCATATTTGACACTAGCTGTCGCTCCCTTCTGCATAGCATTTGCTGTTGTTTGGGCAGTGTATCGCCGTGTATCATTTGCTTGGATTGGCCAAGATATCCTTGGTATTGCACTGATAATCACCGTTCTTCAGATTGTTCGCGTACCGAATCTCAAGGTTGGAACAGTTCTTCTCGGTTGTGCCTTTTTTTATGACATCTTCTGGGTATTTGTTTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTGGCTCGTGGTGATAAAAGTGGAGAGGATGGTATCCCAATGCTACTAAAAATCCCACGGATGTTTGATCCTTGGGGTGGCTACAGCATCATCGGGTTTGGTGATATTATCTTACCTGGATTGGTTGTAGCCTTTTCACTAAGGTATGATTGGTTGACAAATAAGACTCTTCGAACGGGTTACTTTGTGTGGGCAATGACAGCTTATGGTGCAGGTCTCCTGGTCACCTATGTGGCTTTGAACTTGATGGATGGACATGGCCAACCTGCTTTGTTATACATAGTCCCATTCACACTTGGTACCTTTTTAACCTTGGGACAGATGAGAGGTGACCTCAAAGTTCTGTGGACAAGAGGAGAACCAGAGAGGCCTTGCCCGCACGTACGACTCCAATCCTCTCACTCTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0001101 GO:0002376 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009909 GO:0009987 GO:0010033 GO:0010439 GO:0010453 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010675 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0031399 GO:0032268 GO:0032269 GO:0032870 GO:0032991 GO:0033043 GO:0033044 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0042742 GO:0042762 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043487 GO:0043488 GO:0043489 GO:0043565 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045088 GO:0045595 GO:0045824 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048831 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061013 GO:0061085 GO:0062012 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071229 GO:0071310 GO:0071345 GO:0071346 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0097452 GO:0098542 GO:1900376 GO:1901360 GO:1901363 GO:1901700 GO:1901701 GO:1902275 GO:1902369 GO:1902373 GO:1902464 GO:1902494 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903508 GO:1905933 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

538

Amino Acids

59.51

Weight (kDa)

6.1

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PA PF02225 83 - 166 1.6e-11 PA domain
Peptidase_A22B PF04258 243 - 522 1.2e-102 Signal peptide peptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 469, 1409, 1480
Acc65I GGTACC 2 cut(s) 602, 1505
AccB1I GGYRCC 4 cut(s) 602, 716, 937, 1505
AccII CGCG 1 cut(s) 1098
AciI CCGC 2 cut(s) 32, 1583
AclWI GGATC 2 cut(s) 161, 1268
AcoI YGGCCR 2 cut(s) 1045, 1465
AcuI CTGAAG 2 cut(s) 360, 1070
AcvI CACGTG 1 cut(s) 302
AfaI GTAC 6 cut(s) 277, 318, 604, 1101, 1507, 1590
AfiI CCNNNNNNNGG 2 cut(s) 947, 1283
AflIII ACRYGT 1 cut(s) 700
AgsI TTSAA 3 cut(s) 415, 676, 1447
AjnI CCWGG 4 cut(s) 109, 210, 1321, 1425
AleI CACNNNNGTG 1 cut(s) 1436
AloI GAACNNNNNNTCC 2 cut(s) 63, 95
AluBI AGCT 8 cut(s) 63, 295, 538, 653, 670, 953, 974, 1409
AluI AGCT 8 cut(s) 63, 295, 538, 653, 670, 953, 974, 1409
Alw21I GWGCWC 1 cut(s) 65
Alw26I GTCTC 3 cut(s) 56, 100, 1427
AlwI GGATC 2 cut(s) 161, 1268
Ama87I CYCGRG 1 cut(s) 10
AoxI GGCC 5 cut(s) 862, 882, 1045, 1465, 1574
ApeKI GCWGC 3 cut(s) 535, 650, 749
Asp718I GGTACC 2 cut(s) 602, 1505
AspS9I GGNCC 2 cut(s) 203, 862
AsuHPI GGTGA 7 cut(s) 500, 722, 1069, 1229, 1319, 1423, 1547
AsuII TTCGAA 1 cut(s) 1378
AvaI CYCGRG 1 cut(s) 10
AvaII GGWCC 1 cut(s) 203
BaeGI GKGCMC 1 cut(s) 942
BalI TGGCCA 2 cut(s) 1047, 1467
BanI GGYRCC 4 cut(s) 602, 716, 937, 1505
BanII GRGCYC 2 cut(s) 65, 196
BauI CACGAG 1 cut(s) 1212
BbrPI CACGTG 1 cut(s) 302
BbsI GAAGAC 2 cut(s) 435, 687
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 3 cut(s) 547, 662, 761
BccI CCATC 6 cut(s) 389, 412, 614, 1229, 1447, 1451
BceAI ACGGC 1 cut(s) 1008
BcgI CGANNNNNNTGC 2 cut(s) 312, 346
BciT130I CCWGG 4 cut(s) 111, 212, 1323, 1427
BciVI GTATCC 1 cut(s) 1250
BcoDI GTCTC 3 cut(s) 56, 100, 1427
BfaI CTAG 3 cut(s) 243, 728, 971
BfmI CTRYAG 2 cut(s) 866, 1288
BfuAI ACCTGC 3 cut(s) 469, 1409, 1480
BfuI GTATCC 1 cut(s) 1250
BisI GCNGC 4 cut(s) 33, 536, 651, 750
BlsI GCNGC 4 cut(s) 34, 537, 652, 751
Bme1390I CCNGG 4 cut(s) 111, 212, 1323, 1427
Bme18I GGWCC 1 cut(s) 203
BmeT110I CYCGRG 1 cut(s) 10
BmgT120I GGNCC 2 cut(s) 203, 862
BmiI GGNNCC 6 cut(s) 144, 604, 718, 939, 1184, 1507
BmrFI CCNGG 4 cut(s) 111, 212, 1323, 1427
BmsI GCATC 2 cut(s) 670, 1302
BpiI GAAGAC 2 cut(s) 435, 687
BplI GAGNNNNNCTC 2 cut(s) 1524, 1556
BpmI CTGGAG 2 cut(s) 90, 939
Bpu14I TTCGAA 1 cut(s) 1378
BpuEI CTTGAG 1 cut(s) 1094
BsaAI YACGTR 2 cut(s) 302, 1588
BsaI GGTCTC 2 cut(s) 100, 1427
BsaJI CCNNGG 8 cut(s) 210, 322, 345, 744, 1057, 1262, 1277, 1518
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 2 cut(s) 947, 1283
Bse1I ACTGG 2 cut(s) 564, 720
Bse3DI GCAATG 3 cut(s) 548, 567, 1407
BseBI CCWGG 4 cut(s) 111, 212, 1323, 1427
BseDI CCNNGG 8 cut(s) 210, 322, 345, 744, 1057, 1262, 1277, 1518
BseGI GGATG 5 cut(s) 381, 685, 1240, 1272, 1462
BseLI CCNNNNNNNGG 2 cut(s) 947, 1283
BseMI GCAATG 3 cut(s) 548, 567, 1407
BseMII CTCAG 2 cut(s) 38, 50
BseNI ACTGG 2 cut(s) 564, 720
BseRI GAGGAG 1 cut(s) 1575
BseSI GKGCMC 1 cut(s) 942
BseXI GCAGC 3 cut(s) 547, 662, 761
BsgI GTGCAG 2 cut(s) 554, 1437
Bsh1236I CGCG 1 cut(s) 1098
BshFI GGCC 5 cut(s) 864, 884, 1047, 1467, 1576
BshNI GGYRCC 4 cut(s) 602, 716, 937, 1505
BsiHKAI GWGCWC 1 cut(s) 65
BsiHKCI CYCGRG 1 cut(s) 10
BsiWI CGTACG 1 cut(s) 1588
BslFI GGGAC 2 cut(s) 1475, 1536
BslI CCNNNNNNNGG 2 cut(s) 947, 1283
BsmAI GTCTC 3 cut(s) 56, 100, 1427
BsmFI GGGAC 2 cut(s) 1475, 1536
BsnI GGCC 5 cut(s) 864, 884, 1047, 1467, 1576
Bso31I GGTCTC 2 cut(s) 100, 1427
BsoBI CYCGRG 1 cut(s) 10
Bsp119I TTCGAA 1 cut(s) 1378
Bsp1286I GDGCHC 3 cut(s) 65, 196, 942
Bsp143I GATC 2 cut(s) 153, 1273
Bsp19I CCATGG 1 cut(s) 744
BspACI CCGC 2 cut(s) 32, 1583
BspANI GGCC 5 cut(s) 864, 884, 1047, 1467, 1576
BspCNI CTCAG 2 cut(s) 39, 51
BspFNI CGCG 1 cut(s) 1098
BspHI TCATGA 2 cut(s) 85, 1197
BspLI GGNNCC 6 cut(s) 144, 604, 718, 939, 1184, 1507
BspMI ACCTGC 3 cut(s) 469, 1409, 1480
BspPI GGATC 2 cut(s) 161, 1268
BspT104I TTCGAA 1 cut(s) 1378
BspT107I GGYRCC 4 cut(s) 602, 716, 937, 1505
BspTNI GGTCTC 2 cut(s) 100, 1427
BsrDI GCAATG 3 cut(s) 548, 567, 1407
BsrI ACTGG 2 cut(s) 564, 720
BssECI CCNNGG 8 cut(s) 210, 322, 345, 744, 1057, 1262, 1277, 1518
BssMI GATC 2 cut(s) 153, 1273
BssSI CACGAG 1 cut(s) 1212
BssT1I CCWWGG 5 cut(s) 345, 744, 1057, 1277, 1518
Bst2BI CACGAG 1 cut(s) 1212
Bst2UI CCWGG 4 cut(s) 111, 212, 1323, 1427
Bst4CI ACNGT 5 cut(s) 161, 401, 906, 1081, 1123
Bst6I CTCTTC 1 cut(s) 1380
BstAPI GCANNNNNTGC 1 cut(s) 638
BstBAI YACGTR 2 cut(s) 302, 1588
BstBI TTCGAA 1 cut(s) 1378
BstC8I GCNNGC 3 cut(s) 231, 297, 1583
BstDEI CTNAG 3 cut(s) 47, 59, 1346
BstDSI CCRYGG 2 cut(s) 744, 1262
BstEII GGTNACC 2 cut(s) 1429, 1535
BstF5I GGATG 5 cut(s) 381, 685, 1240, 1272, 1462
BstFNI CGCG 1 cut(s) 1098
BstKTI GATC 2 cut(s) 156, 1276
BstMAI GTCTC 3 cut(s) 56, 100, 1427
BstMBI GATC 2 cut(s) 153, 1273
BstMWI GCNNNNNNNGC 8 cut(s) 356, 365, 638, 647, 667, 1406, 1415, 1582
BstNI CCWGG 4 cut(s) 111, 212, 1323, 1427
BstNSI RCATGY 2 cut(s) 233, 704
BstPI GGTNACC 2 cut(s) 1429, 1535
BstSCI CCNGG 4 cut(s) 109, 210, 1321, 1425
BstSFI CTRYAG 2 cut(s) 866, 1288
BstSLI GKGCMC 1 cut(s) 942
BstUI CGCG 1 cut(s) 1098
BstV1I GCAGC 3 cut(s) 547, 662, 761
BstV2I GAAGAC 2 cut(s) 435, 687
BsuI GTATCC 1 cut(s) 1250
BsuRI GGCC 5 cut(s) 864, 884, 1047, 1467, 1576
BtgI CCRYGG 2 cut(s) 744, 1262
BtsCI GGATG 5 cut(s) 381, 685, 1240, 1272, 1462
BtsI GCAGTG 1 cut(s) 1020
BtsIMutI CAGTG 3 cut(s) 557, 1020, 1067
BveI ACCTGC 3 cut(s) 469, 1409, 1480
Cac8I GCNNGC 3 cut(s) 231, 297, 1583
CciI TCATGA 2 cut(s) 85, 1197
Cfr13I GGNCC 2 cut(s) 203, 862
CseI GACGC 1 cut(s) 542
CsiI ACCWGGT 1 cut(s) 109
Csp6I GTAC 6 cut(s) 276, 317, 603, 1100, 1506, 1589
CviQI GTAC 6 cut(s) 276, 317, 603, 1100, 1506, 1589
DdeI CTNAG 3 cut(s) 47, 59, 1346
DpnI GATC 2 cut(s) 155, 1275
DpnII GATC 2 cut(s) 153, 1273
DraI TTTAAA 1 cut(s) 910
EaeI YGGCCR 2 cut(s) 1045, 1465
Eam1104I CTCTTC 1 cut(s) 1380
EarI CTCTTC 1 cut(s) 1380
Ecl136II GAGCTC 1 cut(s) 63
Eco130I CCWWGG 5 cut(s) 345, 744, 1057, 1277, 1518
Eco147I AGGCCT 1 cut(s) 1576
Eco24I GRGCYC 2 cut(s) 65, 196
Eco31I GGTCTC 2 cut(s) 100, 1427
Eco32I GATATC 1 cut(s) 1054
Eco47I GGWCC 1 cut(s) 203
Eco53kI GAGCTC 1 cut(s) 63
Eco57I CTGAAG 2 cut(s) 360, 1070
Eco72I CACGTG 1 cut(s) 302
Eco88I CYCGRG 1 cut(s) 10
Eco91I GGTNACC 2 cut(s) 1429, 1535
EcoICRI GAGCTC 1 cut(s) 63
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 2 cut(s) 1429, 1535
EcoRII CCWGG 4 cut(s) 109, 210, 1321, 1425
EcoRV GATATC 1 cut(s) 1054
EcoT14I CCWWGG 5 cut(s) 345, 744, 1057, 1277, 1518
EcoT38I GRGCYC 2 cut(s) 65, 196
ErhI CCWWGG 5 cut(s) 345, 744, 1057, 1277, 1518
FalI AAGNNNNNCTT 4 cut(s) 926, 958, 1041, 1073
FaqI GGGAC 2 cut(s) 1475, 1536
FauI CCCGC 1 cut(s) 1590
FauNDI CATATG 1 cut(s) 928
Fnu4HI GCNGC 4 cut(s) 33, 536, 651, 750
FokI GGATG 5 cut(s) 368, 692, 1247, 1279, 1469
FriOI GRGCYC 2 cut(s) 65, 196
Fsp4HI GCNGC 4 cut(s) 33, 536, 651, 750
FspBI CTAG 3 cut(s) 243, 728, 971
GluI GCNGC 4 cut(s) 33, 536, 651, 750
GsuI CTGGAG 2 cut(s) 90, 939
HaeIII GGCC 5 cut(s) 864, 884, 1047, 1467, 1576
HgaI GACGC 1 cut(s) 542
HincII GTYRAC 2 cut(s) 565, 1362
HindII GTYRAC 2 cut(s) 565, 1362
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 9 cut(s) 49, 215, 362, 692, 826, 923, 1105, 1372, 1593
HphI GGTGA 7 cut(s) 500, 722, 1069, 1229, 1319, 1423, 1547
Hpy166II GTNNAC 5 cut(s) 319, 557, 565, 1362, 1554
Hpy188I TCNGA 5 cut(s) 60, 147, 688, 902, 1089
Hpy188III TCNNGA 6 cut(s) 86, 404, 415, 448, 823, 1198
Hpy8I GTNNAC 5 cut(s) 319, 557, 565, 1362, 1554
Hpy99I CGWCG 2 cut(s) 176, 437
HpyAV CCTTC 6 cut(s) 670, 701, 707, 820, 952, 994
HpyCH4III ACNGT 5 cut(s) 161, 401, 906, 1081, 1123
HpyCH4IV ACGT 3 cut(s) 301, 913, 1587
HpyF10VI GCNNNNNNNGC 8 cut(s) 356, 365, 638, 647, 667, 1406, 1415, 1582
HpyF3I CTNAG 3 cut(s) 47, 59, 1346
HpySE526I ACGT 3 cut(s) 301, 913, 1587
KpnI GGTACC 2 cut(s) 606, 1509
Kzo9I GATC 2 cut(s) 153, 1273
LmnI GCTCC 3 cut(s) 103, 950, 985
Lsp1109I GCAGC 3 cut(s) 547, 662, 761
LweI GCATC 2 cut(s) 670, 1302
MabI ACCWGGT 1 cut(s) 109
MaeI CTAG 3 cut(s) 243, 728, 971
MaeII ACGT 3 cut(s) 301, 913, 1587
MaeIII GTNAC 3 cut(s) 1385, 1429, 1535
MalI GATC 2 cut(s) 155, 1275
MboI GATC 2 cut(s) 153, 1273
MboII GAAGA 6 cut(s) 440, 687, 1076, 1118, 1147, 1367
MhlI GDGCHC 3 cut(s) 65, 196, 942
MlsI TGGCCA 2 cut(s) 1047, 1467
MluCI AATT 5 cut(s) 4, 328, 483, 517, 753
MluNI TGGCCA 2 cut(s) 1047, 1467
MlyI GAGTC 4 cut(s) 58, 701, 1366, 1587
MmeI TCCRAC 2 cut(s) 170, 1096
Mox20I TGGCCA 2 cut(s) 1047, 1467
MscI TGGCCA 2 cut(s) 1047, 1467
MseI TTAA 4 cut(s) 509, 909, 933, 1514
MslI CAYNNNNRTG 3 cut(s) 1191, 1202, 1436
Msp20I TGGCCA 2 cut(s) 1047, 1467
MspR9I CCNGG 4 cut(s) 111, 212, 1323, 1427
MssI GTTTAAAC 1 cut(s) 910
MvaI CCWGG 4 cut(s) 111, 212, 1323, 1427
MvnI CGCG 1 cut(s) 1098
MwoI GCNNNNNNNGC 8 cut(s) 356, 365, 638, 647, 667, 1406, 1415, 1582
NcoI CCATGG 1 cut(s) 744
NdeI CATATG 1 cut(s) 928
NdeII GATC 2 cut(s) 153, 1273
NlaIV GGNNCC 6 cut(s) 144, 604, 718, 939, 1184, 1507
NmeAIII GCCGAG 1 cut(s) 44
NmuCI GTSAC 2 cut(s) 1429, 1535
NspI RCATGY 2 cut(s) 233, 704
NspV TTCGAA 1 cut(s) 1378
OliI CACNNNNGTG 1 cut(s) 1436
PaeI GCATGC 1 cut(s) 233
PagI TCATGA 2 cut(s) 85, 1197
PceI AGGCCT 1 cut(s) 1576
PciI ACATGT 1 cut(s) 700
PcsI WCGNNNNNNNCGW 1 cut(s) 910
PfeI GAWTC 5 cut(s) 215, 362, 826, 923, 1105
Pfl23II CGTACG 1 cut(s) 1588
PkrI GCNGC 4 cut(s) 34, 537, 652, 751
PleI GAGTC 4 cut(s) 57, 700, 1366, 1587
PmaCI CACGTG 1 cut(s) 302
PmeI GTTTAAAC 1 cut(s) 910
PmlI CACGTG 1 cut(s) 302
PpsI GAGTC 4 cut(s) 57, 700, 1366, 1587
Ppu21I YACGTR 2 cut(s) 302, 1588
PscI ACATGT 1 cut(s) 700
Psp124BI GAGCTC 1 cut(s) 65
Psp6I CCWGG 4 cut(s) 109, 210, 1321, 1425
PspCI CACGTG 1 cut(s) 302
PspEI GGTNACC 2 cut(s) 1429, 1535
PspGI CCWGG 4 cut(s) 109, 210, 1321, 1425
PspLI CGTACG 1 cut(s) 1588
PspN4I GGNNCC 6 cut(s) 144, 604, 718, 939, 1184, 1507
PspPI GGNCC 2 cut(s) 203, 862
RsaI GTAC 6 cut(s) 277, 318, 604, 1101, 1507, 1590
RsaNI GTAC 6 cut(s) 276, 317, 603, 1100, 1506, 1589
RseI CAYNNNNRTG 3 cut(s) 1191, 1202, 1436
SacI GAGCTC 1 cut(s) 65
SaqAI TTAA 4 cut(s) 509, 909, 933, 1514
SatI GCNGC 4 cut(s) 33, 536, 651, 750
Sau3AI GATC 2 cut(s) 153, 1273
Sau96I GGNCC 2 cut(s) 203, 862
SchI GAGTC 4 cut(s) 58, 701, 1366, 1587
ScrFI CCNGG 4 cut(s) 111, 212, 1323, 1427
SduI GDGCHC 3 cut(s) 65, 196, 942
SexAI ACCWGGT 1 cut(s) 109
SfaNI GCATC 2 cut(s) 670, 1302
SfcI CTRYAG 2 cut(s) 866, 1288
SfuI TTCGAA 1 cut(s) 1378
SinI GGWCC 1 cut(s) 203
SmiMI CAYNNNNRTG 3 cut(s) 1191, 1202, 1436
SmlI CTYRAG 1 cut(s) 1109
SmoI CTYRAG 1 cut(s) 1109
SphI GCATGC 1 cut(s) 233
Sse9I AATT 5 cut(s) 4, 328, 483, 517, 753
SseBI AGGCCT 1 cut(s) 1576
SsiI CCGC 2 cut(s) 32, 1583
SspI AATATT 1 cut(s) 94
SspMI CTAG 3 cut(s) 243, 728, 971
SstI GAGCTC 1 cut(s) 65
StuI AGGCCT 1 cut(s) 1576
StyD4I CCNGG 4 cut(s) 109, 210, 1321, 1425
StyI CCWWGG 5 cut(s) 345, 744, 1057, 1277, 1518
TaaI ACNGT 5 cut(s) 161, 401, 906, 1081, 1123
TaiI ACGT 3 cut(s) 304, 916, 1590
TaqI TCGA 4 cut(s) 196, 447, 822, 1378
TaqII GACCGA 1 cut(s) 44
TasI AATT 5 cut(s) 4, 328, 483, 517, 753
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 5 cut(s) 215, 362, 826, 923, 1105
Tru1I TTAA 4 cut(s) 509, 909, 933, 1514
Tru9I TTAA 4 cut(s) 509, 909, 933, 1514
TscAI CASTG 3 cut(s) 564, 1020, 1074
TseFI GTSAC 2 cut(s) 1429, 1535
TseI GCWGC 3 cut(s) 535, 650, 749
Tsp45I GTSAC 2 cut(s) 1429, 1535
TspDTI ATGAA 5 cut(s) 17, 71, 765, 808, 948
TspGWI ACGGA 1 cut(s) 1279
TspRI CASTG 3 cut(s) 564, 1020, 1074
VpaK11BI GGWCC 1 cut(s) 203
XceI RCATGY 2 cut(s) 233, 704
XcmI CCANNNNNNNNNTGG 3 cut(s) 352, 727, 1055
XspI CTAG 3 cut(s) 243, 728, 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.