AT4G01030

repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0016091
Physical Location & Seq
Reverse (-)
447941 .. 450642
2702 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01030.1

Sequence Viewer

Length: 2307 bp
ATGTATCGGTTTCTGGGTTTAACTATCCATGGTGGTTTGATCAAGAGAGGGCTTGATAATTCAGACACACGAGTGGTTTCTGCGTCGATGGGTTTTTATGGAAGATGTGTGAGTTTGGGTTTTGCTAACAAGTTATTCGATGAAATGCCTAAAAGAGATGATCTTGCATGGAACGAGATCGTAATGGTAAACTTGCGGAGTGGGAATTGGGAAAAGGCTGTGGAACTTTTCAGAGAGATGCAGTTTTCTGGTGCTAAAGCTTATGATAGCACAATGGTTAAGCTTTTGCAAGTTTGTAGCAATAAGGAAGGTTTTGCAGAAGGGAGACAGATTCATGGGTATGTTCTGAGACTCGGGCTTGAATCAAATGTGTCTATGTGTAACTCTTTGATTGTCATGTATTCGAGGAATGGCAAGCTTGAATTATCCAGGAAAGTTTTTAACTCGATGAAAGACCGGAATTTGTCTTCGTGGAACTCGATTTTATCGAGTTATACGAAACTTGGTTATGTAGATGATGCTATCGGTCTCCTGGACGAGATGGAGATATGTGGTCTGAAGCCAGATATAGTGACATGGAACTCTCTTTTGTCAGGTTATGCTTCTAAAGGCTTATCCAAAGATGCCATTGCTGTATTGAAGAGAATGCAAATTGCTGGTCTGAAGCCAAGCACGAGCTCAATTAGTAGTCTTCTTCAAGCTGTAGCTGAACCGGGGCATCTTAAACTTGGGAAAGCGATCCACGGATACATATTAAGAAATCAGCTTTGGTACGATGTGTATGTAGAAACCACCTTGATCGACATGTATATTAAAACTGGCTACTTGCCTTACGCCCGGATGGTTTTTGATATGATGGATGCGAAGAACATTGTTGCTTGGAATTCACTCGTCTCGGGACTTTCGTACGCTTGTCTTCTAAAGGATGCTGAAGCTTTGATGATTAGAATGGAGAAGGAAGGGATCAAACCTGATGCTATTACATGGAACAGTCTTGCTTCTGGGTATGCGACTTTGGGGAAACCTGAGAAGGCATTAGATGTGATAGGGAAGATGAAGGAGAAAGGTGTGGCCCCTAACGTGGTTTCATGGACAGCCATTTTTTCAGGATGTTCCAAAAATGGAAACTTCAGGAATGCTCTCAAAGTTTTCATTAAAATGCAGGAAGAAGGTGTTGGTCCGAACGCAGCAACTATGTCCACCTTGCTTAAGATATTAGGTTGCTTAAGTCTACTACACAGTGGCAAAGAGGTTCACGGTTTCTGTTTGAGGAAAAATTTGATCTGCGATGCATATGTTGCAACTGCACTAGTAGATATGTATGGAAAATCAGGGGATCTGCAAAGTGCGATTGAGATTTTCTGGGGCATTAAGAACAAATCGCTAGCTTCTTGGAACTGTATGCTCATGGGTTATGCCATGTTTGGGCGAGGCGAAGAAGGGATCGCGGCTTTCAGTGTGATGCTTGAAGCGGGCATGGAACCAGATGCTATAACGTTTACCTCTGTCTTGTCTGTCTGTAAGAACTCAGGTCTTGTCCAAGAAGGGTGGAAATACTTTGATCTTATGAGGTCTCGTTATGGTATAATCCCGACCATCGAACACTGCTCTTGCATGGTAGATCTGCTCGGGAGATCGGGTTATCTTGATGAAGCCTGGGACTTCATTCAAACAATGTCATTAAAACCCGATGCAACTATTTGGGGTGCTTTTCTTTCATCTTGTAAGATTCATAGAGACCTAGAACTCGCGGAAATCGCTTGGAAGAGGCTTCAAGTACTAGAACCACACAATTCAGCTAACTACATGATGATGATAAACTTGTACAGTAATTTGAACAGATGGGAAGATGTTGAACGTATACGGAACTTAATGAGGAATAACAGGGTGAGAGTCCAGGATCTGTGGAGCTGGATTCAGATAGATCAAACGGTTCACATCTTCTATGCGGAGGGAAAAACACATCCTGATGAAGGAGATATATACTTTGAGCTGTACAAATTAGTCTCTGAGATGAAGAAATCAGGTTATGTGCCAGACACAAGCTGTATACACCAAGACATAAGTGATTCAGAGAAAGAGAAGCTGCTTATGGGACATACAGAGAAGTTAGCAATGACGTATGGCCTTATCAAGAAGAAAGGCTTAGCTCCTATAAGAGTGGTCAAAAACACGAATATATGTTCTGATAGCCACACCGTAGCCAAATACATGTCGGTTTTGAGAAACCGTGAGATTGTTTTACAAGAAGGGGCAAGGGTTCATCATTTCAGAGACGGAAAATGTTCCTGCAACGACTCTTGGTGA

Protein Analysis

768

Amino Acids

86.33

Weight (kDa)

8.43

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 154 - 192 4.1e-07 PPR repeat family
PPR PF01535 157 - 185 3.6e-06 PPR repeat
PPR_3 PF13812 177 - 235 1.3e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 185 - 217 1.2e-07 PPR repeat
PPR_2 PF13041 188 - 236 2.8e-09 PPR repeat family
PPR PF01535 191 - 220 3e-06 PPR repeat
PPR_2 PF13041 289 - 337 2.3e-09 PPR repeat family
PPR_long PF17177 308 - 405 3.1e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 316 - 373 2.3e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 324 - 371 2.8e-11 PPR repeat family
PPR PF01535 327 - 357 1.7e-07 PPR repeat
PPR_3 PF13812 359 - 407 7.9e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 359 - 404 4e-12 PPR repeat family
PPR PF01535 362 - 392 2.4e-07 PPR repeat
PPR_2 PF13041 463 - 507 1.5e-07 PPR repeat family
E_motif PF20431 578 - 640 2.2e-14 E motif
DYW_deaminase PF14432 676 - 768 2.6e-33 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016091)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01030
fragaria_vesca FvH4_7g16210
malus_domestica MD01G1078800.v1.1
prunus_persica Prupe.2G185700_v2.0.a1 Prupe.2G185700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0359241
rosa_laevigata RLG00000027892
rosa_multiflora Rmu_ssc0000135.1_g000027
rosa_roxburghii Rroxscaffold_4G00297210
rosa_rugosa Rorug01G0268800
rosa_samantha Rh1AG282600 Rh1BG249000 Rh1CG266700 Rh1DG277800
rosa_wichuraiana Rw1G025080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 1231, 1861, 2050
AccII CGCG 2 cut(s) 1448, 1751
AciI CCGC 5 cut(s) 196, 1448, 1472, 1751, 1949
AclI AACGTT 1 cut(s) 1496
AclWI GGATC 5 cut(s) 733, 971, 1344, 1451, 1908
AcsI RAATTY 3 cut(s) 460, 883, 1276
AcuI CTGAAG 4 cut(s) 578, 683, 951, 1114
AfaI GTAC 5 cut(s) 773, 908, 1779, 1826, 1997
AfiI CCNNNNNNNGG 3 cut(s) 1081, 1425, 1973
AflII CTTAAG 2 cut(s) 1208, 1225
AflIII ACRYGT 2 cut(s) 804, 2211
AgsI TTSAA 9 cut(s) 362, 422, 640, 698, 1469, 1670, 1775, 1837, 1856
AhlI ACTAGT 1 cut(s) 1309
AjnI CCWGG 4 cut(s) 428, 531, 1655, 1896
AjuI GAANNNNNNNTTGG 4 cut(s) 751, 783, 1158, 1190
AleI CACNNNNGTG 1 cut(s) 71
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 8 cut(s) 319, 343, 533, 898, 1578, 1731, 2011, 2268
AlwI GGATC 5 cut(s) 733, 971, 1344, 1451, 1908
AlwNI CAGNNNCTG 1 cut(s) 1903
Ama87I CYCGRG 3 cut(s) 353, 895, 1628
AoxI GGCC 2 cut(s) 1071, 2125
ApeKI GCWGC 2 cut(s) 1187, 2086
ApoI RAATTY 3 cut(s) 460, 883, 1276
ArsI GACNNNNNNTTYG 2 cut(s) 643, 675
Asp700I GAANNNNTTC 1 cut(s) 2284
AspS9I GGNCC 2 cut(s) 1072, 1178
AsuC2I CCSGG 2 cut(s) 714, 838
AsuHPI GGTGA 1 cut(s) 1900
AsuNHI GCTAGC 1 cut(s) 1384
AvaI CYCGRG 3 cut(s) 353, 895, 1628
AvaII GGWCC 1 cut(s) 1178
BanII GRGCYC 1 cut(s) 680
BauI CACGAG 2 cut(s) 69, 673
BbsI GAAGAC 3 cut(s) 459, 683, 908
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 2 cut(s) 1199, 2073
BccI CCATC 6 cut(s) 82, 535, 835, 850, 1604, 1836
BciT130I CCWGG 4 cut(s) 430, 533, 1657, 1898
BciVI GTATCC 1 cut(s) 740
BclI TGATCA 1 cut(s) 39
BcnI CCSGG 2 cut(s) 714, 838
BcoDI GTCTC 8 cut(s) 319, 343, 533, 898, 1578, 1731, 2011, 2268
BcuI ACTAGT 1 cut(s) 1309
BfaI CTAG 4 cut(s) 1310, 1385, 1742, 1781
BfmI CTRYAG 1 cut(s) 702
BfrI CTTAAG 2 cut(s) 1208, 1225
BfuI GTATCC 1 cut(s) 740
BglII AGATCT 1 cut(s) 1621
BisI GCNGC 3 cut(s) 1188, 1449, 2087
BlpI GCTNAGC 1 cut(s) 2146
BlsI GCNGC 3 cut(s) 1189, 1450, 2088
BmcAI AGTACT 1 cut(s) 1779
Bme1390I CCNGG 6 cut(s) 430, 533, 714, 838, 1657, 1898
Bme18I GGWCC 1 cut(s) 1178
BmeT110I CYCGRG 3 cut(s) 353, 895, 1628
BmgT120I GGNCC 2 cut(s) 1072, 1178
BmiI GGNNCC 2 cut(s) 1074, 1482
BmrFI CCNGG 6 cut(s) 430, 533, 714, 838, 1657, 1898
BmtI GCTAGC 1 cut(s) 1388
BpiI GAAGAC 3 cut(s) 459, 683, 908
Bpu1102I GCTNAGC 1 cut(s) 2146
BpuMI CCSGG 2 cut(s) 714, 838
BsaI GGTCTC 3 cut(s) 533, 1578, 1731
BsaJI CCNNGG 4 cut(s) 28, 713, 742, 1656
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 2 cut(s) 1624, 1654
Bsc4I CCNNNNNNNGG 3 cut(s) 1081, 1425, 1973
Bse1I ACTGG 1 cut(s) 823
Bse3DI GCAATG 2 cut(s) 627, 2121
BseBI CCWGG 4 cut(s) 430, 533, 1657, 1898
BseDI CCNNGG 4 cut(s) 28, 713, 742, 1656
BseGI GGATG 5 cut(s) 846, 865, 931, 1115, 1963
BseLI CCNNNNNNNGG 3 cut(s) 1081, 1425, 1973
BseMI GCAATG 2 cut(s) 627, 2121
BseMII CTCAG 4 cut(s) 338, 1017, 1542, 2001
BseNI ACTGG 1 cut(s) 823
BseXI GCAGC 2 cut(s) 1199, 2073
BsgI GTGCAG 1 cut(s) 1290
Bsh1236I CGCG 2 cut(s) 1448, 1751
BshFI GGCC 2 cut(s) 1073, 2127
BsiHKAI GWGCWC 1 cut(s) 680
BsiHKCI CYCGRG 3 cut(s) 353, 895, 1628
BsiSI CCGG 3 cut(s) 457, 713, 838
BsiWI CGTACG 1 cut(s) 906
BslFI GGGAC 3 cut(s) 912, 1673, 2109
BslI CCNNNNNNNGG 3 cut(s) 1081, 1425, 1973
BsmAI GTCTC 8 cut(s) 319, 343, 533, 898, 1578, 1731, 2011, 2268
BsmBI CGTCTC 2 cut(s) 898, 2268
BsmFI GGGAC 3 cut(s) 912, 1673, 2109
BsmI GAATGC 2 cut(s) 651, 1141
BsnI GGCC 2 cut(s) 1073, 2127
Bso31I GGTCTC 3 cut(s) 533, 1578, 1731
BsoBI CYCGRG 3 cut(s) 353, 895, 1628
Bsp1286I GDGCHC 1 cut(s) 680
Bsp1407I TGTACA 2 cut(s) 1824, 1995
Bsp1720I GCTNAGC 1 cut(s) 2146
Bsp19I CCATGG 1 cut(s) 28
BspACI CCGC 5 cut(s) 196, 1448, 1472, 1751, 1949
BspANI GGCC 2 cut(s) 1073, 2127
BspCNI CTCAG 4 cut(s) 339, 1018, 1541, 2002
BspFNI CGCG 2 cut(s) 1448, 1751
BspLI GGNNCC 2 cut(s) 1074, 1482
BspOI GCTAGC 1 cut(s) 1388
BspPI GGATC 5 cut(s) 733, 971, 1344, 1451, 1908
BspTI CTTAAG 2 cut(s) 1208, 1225
BspTNI GGTCTC 3 cut(s) 533, 1578, 1731
BsrDI GCAATG 2 cut(s) 627, 2121
BsrGI TGTACA 2 cut(s) 1824, 1995
BsrI ACTGG 1 cut(s) 823
BssECI CCNNGG 4 cut(s) 28, 713, 742, 1656
BssNAI GTATAC 2 cut(s) 1862, 2051
BssSI CACGAG 2 cut(s) 69, 673
BssT1I CCWWGG 1 cut(s) 28
Bst1107I GTATAC 2 cut(s) 1862, 2051
Bst2BI CACGAG 2 cut(s) 69, 673
Bst2UI CCWGG 4 cut(s) 430, 533, 1657, 1898
Bst4CI ACNGT 8 cut(s) 992, 1241, 1259, 1400, 1829, 1933, 2200, 2231
Bst6I CTCTTC 2 cut(s) 635, 1760
BstAFI CTTAAG 2 cut(s) 1208, 1225
BstAPI GCANNNNNTGC 1 cut(s) 1298
BstAUI TGTACA 2 cut(s) 1824, 1995
BstC8I GCNNGC 3 cut(s) 416, 1386, 1474
BstDEI CTNAG 5 cut(s) 347, 1026, 1528, 2010, 2146
BstDSI CCRYGG 2 cut(s) 28, 742
BstENI CCTNNNNNAGG 1 cut(s) 1971
BstF5I GGATG 5 cut(s) 846, 865, 931, 1115, 1963
BstFNI CGCG 2 cut(s) 1448, 1751
BstMAI GTCTC 8 cut(s) 319, 343, 533, 898, 1578, 1731, 2011, 2268
BstMWI GCNNNNNNNGC 2 cut(s) 1298, 1757
BstNI CCWGG 4 cut(s) 430, 533, 1657, 1898
BstNSI RCATGY 2 cut(s) 808, 2215
BstSCI CCNGG 6 cut(s) 428, 531, 712, 836, 1655, 1896
BstSFI CTRYAG 1 cut(s) 702
BstUI CGCG 2 cut(s) 1448, 1751
BstV1I GCAGC 2 cut(s) 1199, 2073
BstV2I GAAGAC 3 cut(s) 459, 683, 908
BstX2I RGATCY 3 cut(s) 1336, 1621, 1900
BstYI RGATCY 3 cut(s) 1336, 1621, 1900
BstZ17I GTATAC 2 cut(s) 1862, 2051
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 2 cut(s) 1073, 2127
BtgI CCRYGG 2 cut(s) 28, 742
BtgZI GCGATG 1 cut(s) 1302
BtsCI GGATG 5 cut(s) 846, 865, 931, 1115, 1963
BtsI GCAGTG 1 cut(s) 1603
BtsIMutI CAGTG 3 cut(s) 1246, 1462, 1603
Cac8I GCNNGC 3 cut(s) 416, 1386, 1474
CaiI CAGNNNCTG 1 cut(s) 1903
Cfr13I GGNCC 2 cut(s) 1072, 1178
CseI GACGC 1 cut(s) 72
Csp6I GTAC 5 cut(s) 772, 907, 1778, 1825, 1996
CspCI CAANNNNNGTGG 2 cut(s) 1529, 1564
CviQI GTAC 5 cut(s) 772, 907, 1778, 1825, 1996
DdeI CTNAG 5 cut(s) 347, 1026, 1528, 2010, 2146
Eam1104I CTCTTC 2 cut(s) 635, 1760
EarI CTCTTC 2 cut(s) 635, 1760
Ecl136II GAGCTC 1 cut(s) 678
Eco130I CCWWGG 1 cut(s) 28
Eco24I GRGCYC 1 cut(s) 680
Eco31I GGTCTC 3 cut(s) 533, 1578, 1731
Eco47I GGWCC 1 cut(s) 1178
Eco53kI GAGCTC 1 cut(s) 678
Eco57I CTGAAG 4 cut(s) 578, 683, 951, 1114
Eco88I CYCGRG 3 cut(s) 353, 895, 1628
EcoICRI GAGCTC 1 cut(s) 678
EcoNI CCTNNNNNAGG 1 cut(s) 1971
EcoRI GAATTC 1 cut(s) 883
EcoRII CCWGG 4 cut(s) 428, 531, 1655, 1896
EcoT14I CCWWGG 1 cut(s) 28
EcoT22I ATGCAT 1 cut(s) 1294
EcoT38I GRGCYC 1 cut(s) 680
ErhI CCWWGG 1 cut(s) 28
Esp3I CGTCTC 2 cut(s) 898, 2268
FalI AAGNNNNNCTT 2 cut(s) 2129, 2161
FaqI GGGAC 3 cut(s) 912, 1673, 2109
FauI CCCGC 1 cut(s) 1465
FauNDI CATATG 1 cut(s) 1294
FbaI TGATCA 1 cut(s) 39
FblI GTMKAC 3 cut(s) 1231, 1861, 2050
Fnu4HI GCNGC 3 cut(s) 1188, 1449, 2087
FokI GGATG 5 cut(s) 853, 872, 938, 1122, 1950
FriOI GRGCYC 1 cut(s) 680
Fsp4HI GCNGC 3 cut(s) 1188, 1449, 2087
FspBI CTAG 4 cut(s) 1310, 1385, 1742, 1781
GluI GCNGC 3 cut(s) 1188, 1449, 2087
HaeIII GGCC 2 cut(s) 1073, 2127
HapII CCGG 3 cut(s) 457, 713, 838
HgaI GACGC 1 cut(s) 72
HindIII AAGCTT 4 cut(s) 258, 281, 416, 933
HinfI GANTC 8 cut(s) 331, 351, 362, 1729, 1893, 1915, 2069, 2297
HpaII CCGG 3 cut(s) 457, 713, 838
HphI GGTGA 1 cut(s) 1900
Hpy166II GTNNAC 8 cut(s) 190, 1200, 1232, 1255, 1500, 1862, 1936, 2051
Hpy188III TCNNGA 9 cut(s) 43, 897, 1107, 1132, 1591, 1630, 1646, 1967, 2134
Hpy8I GTNNAC 8 cut(s) 190, 1200, 1232, 1255, 1500, 1862, 1936, 2051
Hpy99I CGWCG 1 cut(s) 88
HpyCH4III ACNGT 8 cut(s) 992, 1241, 1259, 1400, 1829, 1933, 2200, 2231
HpyCH4IV ACGT 4 cut(s) 1080, 1496, 1858, 2120
HpyF10VI GCNNNNNNNGC 2 cut(s) 1298, 1757
HpyF3I CTNAG 5 cut(s) 347, 1026, 1528, 2010, 2146
HpySE526I ACGT 4 cut(s) 1080, 1496, 1858, 2120
Ksp22I TGATCA 1 cut(s) 39
LmnI GCTCC 2 cut(s) 1908, 2155
Lsp1109I GCAGC 2 cut(s) 1199, 2073
MaeI CTAG 4 cut(s) 1310, 1385, 1742, 1781
MaeII ACGT 4 cut(s) 1080, 1496, 1858, 2120
MaeIII GTNAC 2 cut(s) 380, 571
MflI RGATCY 3 cut(s) 1336, 1621, 1900
MhlI GDGCHC 1 cut(s) 680
MlyI GAGTC 3 cut(s) 345, 1902, 2291
Mph1103I ATGCAT 1 cut(s) 1294
MroXI GAANNNNTTC 1 cut(s) 2284
MslI CAYNNNNRTG 5 cut(s) 71, 339, 1157, 1811, 1968
MspCI CTTAAG 2 cut(s) 1208, 1225
MspI CCGG 3 cut(s) 457, 713, 838
MspR9I CCNGG 6 cut(s) 430, 533, 714, 838, 1657, 1898
Mva1269I GAATGC 2 cut(s) 651, 1141
MvaI CCWGG 4 cut(s) 430, 533, 1657, 1898
MvnI CGCG 2 cut(s) 1448, 1751
MwoI GCNNNNNNNGC 2 cut(s) 1298, 1757
NciI CCSGG 2 cut(s) 714, 838
NcoI CCATGG 1 cut(s) 28
NdeI CATATG 1 cut(s) 1294
NheI GCTAGC 1 cut(s) 1384
NlaIV GGNNCC 2 cut(s) 1074, 1482
NmuCI GTSAC 1 cut(s) 571
NsiI ATGCAT 1 cut(s) 1294
NspI RCATGY 2 cut(s) 808, 2215
OliI CACNNNNGTG 1 cut(s) 71
PciI ACATGT 2 cut(s) 804, 2211
PcsI WCGNNNNNNNCGW 4 cut(s) 476, 485, 494, 902
PctI GAATGC 2 cut(s) 651, 1141
PdmI GAANNNNTTC 1 cut(s) 2284
PfeI GAWTC 5 cut(s) 331, 362, 1729, 1915, 2069
Pfl23II CGTACG 1 cut(s) 906
PfoI TCCNGGA 3 cut(s) 428, 531, 1896
PkrI GCNGC 3 cut(s) 1189, 1450, 2088
PleI GAGTC 3 cut(s) 345, 1901, 2291
PpsI GAGTC 3 cut(s) 345, 1901, 2291
PscI ACATGT 2 cut(s) 804, 2211
Psp124BI GAGCTC 1 cut(s) 680
Psp1406I AACGTT 1 cut(s) 1496
Psp6I CCWGG 4 cut(s) 428, 531, 1655, 1896
PspGI CCWGG 4 cut(s) 428, 531, 1655, 1896
PspLI CGTACG 1 cut(s) 906
PspN4I GGNNCC 2 cut(s) 1074, 1482
PspPI GGNCC 2 cut(s) 1072, 1178
PstNI CAGNNNCTG 1 cut(s) 1903
PsuI RGATCY 3 cut(s) 1336, 1621, 1900
RsaI GTAC 5 cut(s) 773, 908, 1779, 1826, 1997
RsaNI GTAC 5 cut(s) 772, 907, 1778, 1825, 1996
RseI CAYNNNNRTG 5 cut(s) 71, 339, 1157, 1811, 1968
SacI GAGCTC 1 cut(s) 680
SatI GCNGC 3 cut(s) 1188, 1449, 2087
Sau96I GGNCC 2 cut(s) 1072, 1178
ScaI AGTACT 1 cut(s) 1779
SchI GAGTC 3 cut(s) 345, 1902, 2291
ScrFI CCNGG 6 cut(s) 430, 533, 714, 838, 1657, 1898
SduI GDGCHC 1 cut(s) 680
SfcI CTRYAG 1 cut(s) 702
SinI GGWCC 1 cut(s) 1178
SmiMI CAYNNNNRTG 5 cut(s) 71, 339, 1157, 1811, 1968
SmlI CTYRAG 2 cut(s) 1208, 1225
SmoI CTYRAG 2 cut(s) 1208, 1225
SpeI ACTAGT 1 cut(s) 1309
SsiI CCGC 5 cut(s) 196, 1448, 1472, 1751, 1949
SspMI CTAG 4 cut(s) 1310, 1385, 1742, 1781
SstI GAGCTC 1 cut(s) 680
StyD4I CCNGG 6 cut(s) 428, 531, 712, 836, 1655, 1896
StyI CCWWGG 1 cut(s) 28
TaaI ACNGT 8 cut(s) 992, 1241, 1259, 1400, 1829, 1933, 2200, 2231
TaiI ACGT 4 cut(s) 1083, 1499, 1861, 2123
TaqI TCGA 8 cut(s) 86, 138, 404, 446, 479, 488, 801, 1599
TaqII GACCGA 1 cut(s) 515
TatI WGTACW 3 cut(s) 1777, 1824, 1995
TauI GCSGC 1 cut(s) 1451
TfiI GAWTC 5 cut(s) 331, 362, 1729, 1915, 2069
TscAI CASTG 3 cut(s) 1246, 1462, 1610
TseFI GTSAC 1 cut(s) 571
TseI GCWGC 2 cut(s) 1187, 2086
Tsp45I GTSAC 1 cut(s) 571
TspGWI ACGGA 3 cut(s) 759, 1879, 2292
TspRI CASTG 3 cut(s) 1246, 1462, 1610
Vha464I CTTAAG 2 cut(s) 1208, 1225
VpaK11BI GGWCC 1 cut(s) 1178
XagI CCTNNNNNAGG 1 cut(s) 1971
XapI RAATTY 3 cut(s) 460, 883, 1276
XceI RCATGY 2 cut(s) 808, 2215
XmiI GTMKAC 3 cut(s) 1231, 1861, 2050
XmnI GAANNNNTTC 1 cut(s) 2284
XspI CTAG 4 cut(s) 1310, 1385, 1742, 1781
ZrmI AGTACT 1 cut(s) 1779
Zsp2I ATGCAT 1 cut(s) 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.