FvH4_7g16210

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0016091
Physical Location & Seq
Forward (+)
13936784 .. 13939516
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g16210.t1

Sequence Viewer

Length: 2733 bp
ATGGCCAAACTAGCTCAGTTTCACCTCCTTCAAACCTCATTAAGCTCCAAACCACCATCTTTGCCTAGTCTTTCTTCAACCTTTACCTTGTTGGATGACTTGGGTCAGTTGGGTGAACTCAAGAGTTTGAATTCAGTGAAAGCAGTCCATGCCCAGATGATCAAAATGTCCAACAACAACAAAATGGATGTAAAGGGGAAGTCTTTGGTCACTTATTACTTGGAGTTTGGTGATCCCAGGTCAGCTGCAATGGCTTTCTTTGTGGGTAGTTCACATTATCTTCCATGGAGTAGTTTCCTAGAAGAGTTTAGAAGGTTTGGGAATGATCCAGAAGATATTCTCAAGTTCTTTGTTGAGTTTTGTAGTGGGGGAGTAGTTTTTGACAGCAGAGTTCTTTGTTTTGTTTTGAAACTCTGTGGAAATTTGAAGGAATTGTGGCTTGGGTTGGAAATGCATGCTTACTTGATCAAAAGGGGGTATGATTTGGATGTTTATTTGAATTGTGCATTGATTAATCTTTATGGGAATTGTTTGGGTATAGAAAGTGCCAACCGGTTATTTGATGAAATGGCTAAGAAAGAAGATATGTTGTGGGATGAGGTAATCAAGCTCAACTCCAAGAATGGGAGATGGTTGAAGGTTCTAGAATTGTTCAGGAGTATGCAATTGACATTTGCTAAACCCAATAGTGCTACAATCATCAATGCGCTTCAAGCTTGTGGGAAAATGAGAGCTCTCAATGAAGGAAAGCAAATTCATGGGTATGTTTTAAGATGGGAATTAGAATCGAGTTTGGCAATATGCAATTCCCTTATTAGCATGTACTCTAGAAATGACAGACTAGAATTAGCTAAAGCTGTTTTTGATTCAATGAATGATCATAACTTATCTTCGTGGAACTCGATTATTTCTTCTTATGCTGCACTTGGTTGCTTGAATGATGCTTGGATTGTTTATAATAAAATGGAGTCGTCGTCGAATGTCAAGCCAGACATTGTGACTTGGAATTGCCTCTTGTCTGGCCATTCTCTTCATGGCTTGTATCAAGATGTACTTACCATTATGAAGAGAATGCAAGATGCCGGGTTCAAGCCTAATTCAAGTTCTGTTACTAGTGTTCTTCAAGCAGTTACTGAATTATGTTTCTTGAAGCATGGGAGAGAAATTCATGGTTTTGTGATTAGAAATGGGCTCGACTATGATGTATATGTAGGAACTTCTTTAGTAGACATGTATGTGAAGAATAATTGCTTATCATGTGCTCACATTGTCTTTGACAACATGAATAACAAAAACATTTTTGCATGGAACTCCTTGATATCAGGTTATTCCTTCAAGGGTCTTTTTGAAGATGCTGAACAGCTATTAAACAGAATGAGTCGAGAAGGAATCAAACCGGACATAGTGACATGGAATGGTTTGATTTCAGGGTATGCAATGAAGGGTCGCCATAAGGAAGCTATAGCGGCAATTCATCGGATGAAAAGTTCAGGGTTAACCCCTAATGTGGTTTCATGGACTGCTCTTATATCAGGTTGTTCACAAAATGAGAATCATGCTGCATCCCTCAAGTATTTTGTTCAAATGCAAAAAGAAGGTATCAAGGCAAACTTCGTCACCATATCCAGCCTACTTAAAGCTTGTGCAGGACTCTCTTTGTTGCGTAAGGGTGAAGAGATACACTGTTTCAGCATACGAATTGGTTTAGTTGAGGATGTATATGTAGCCACAGCCCTCATAGATATGTACAGCAAGGCAGGCAATTTCAGAAGTGCCTATGAGGTTTTTAGGATGATTAAAAACAAGACATTAGCTTCTTGGAATTGCATGATTATGGGATTTGCTACGTATGGCTCTGCGAAAGAGGCTATTTCTCTTTTCAATGAAATGTGTGGAGCTGGTCTGCAGCCGGATGCTATAACCTTCACAGCTTTGCTTTCTGGTTGCAAGAACTCAGGTTTAGTCGATGAAGGATGGGAGTTGTTTGATAGTATGAGCACAGATTACAACATAGCTCCAACTATTGAGCATTTCTCTTGCATGGTAGATATTCTTGCAAGAGCTGGTTATCTTGATGAAGCTTGGGATTTTATTCAAACAATGCCATTAAAGCCAGACGCCACTGTATGGGGTGCTTTTCTTGCTTCCTGCGTAACACATAAGTACTTGGAGTTTGCAGAGACTGCAGCAAAGAATCTTTTTGAGTTGGAACCTCATAATCCAGCCAATTATGTCCTGATGATGAACTTATATTCAATGTCCAACAGATGGGAGGATGTGGAACGTCTTAAAGACTTGATGAAGAAAGTAGGGGTGAAACATAGTCCTGTCTGGAGCTGGACACAAATTGATCAAAAAATCCATATGTTCAGTGCAGAAGGGAAACCACATCCAGACTTGGGAGAAATATATTTTGAAATGTACAATTTGATTTGCGAAATGAAGAAACTAGGCTACGAGCCTGACATTAGCTGTGTGTGTCAAAACATTGATGTCGTAGAGAAGAAGAAGATGCTGCTGAGTCACACGGAGAAATTGGCCATTACATATGGACTGATGAAGATGAAAAATGGGAAACCTATCAGGGTGGTTAATAACACAAGGGTCTGTTCTGATTGTCATACTGCAGCAAAATACATGTCTGTGGTGCGAAAATGCGAGATTTTCCTCAAAGATGGTACTCGGTTTCACCACTTCAGGGAAGGAAAGTGCACCTGCAATGACTGCTGGTAA

Protein Analysis

911

Amino Acids

102.71

Weight (kDa)

7.47

Isoelectric Point (pI)

38.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 330 - 376 7.1e-08 PPR repeat family
PPR_3 PF13812 426 - 478 7.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 431 - 470 3.4e-10 PPR repeat family
PPR PF01535 435 - 464 2.1e-07 PPR repeat
PPR_3 PF13812 455 - 514 1.8e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 463 - 495 2.7e-06 PPR repeat
PPR_2 PF13041 466 - 514 3.3e-13 PPR repeat family
PPR PF01535 469 - 499 2.1e-06 PPR repeat
PPR_3 PF13812 492 - 549 2.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 501 - 549 5e-10 PPR repeat family
PPR_2 PF13041 605 - 650 6.9e-12 PPR repeat family
E_motif PF20431 720 - 782 5.9e-18 E motif
DYW_deaminase PF14432 818 - 910 1.7e-34 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016091)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01030
fragaria_vesca FvH4_7g16210
malus_domestica MD01G1078800.v1.1
prunus_persica Prupe.2G185700_v2.0.a1 Prupe.2G185700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0359241
rosa_laevigata RLG00000027892
rosa_multiflora Rmu_ssc0000135.1_g000027
rosa_roxburghii Rroxscaffold_4G00297210
rosa_rugosa Rorug01G0268800
rosa_samantha Rh1AG282600 Rh1BG249000 Rh1CG266700 Rh1DG277800
rosa_wichuraiana Rw1G025080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 957
AarI CACCTGC 1 cut(s) 2723
Acc36I ACCTGC 1 cut(s) 2723
AccB7I CCANNNNNTGG 2 cut(s) 2127, 2268
AccI GTMKAC 1 cut(s) 1227
AciI CCGC 1 cut(s) 1466
AclWI GGATC 2 cut(s) 227, 320
AcoI YGGCCR 3 cut(s) 3, 1021, 2538
AcsI RAATTY 4 cut(s) 130, 421, 753, 1164
AcuI CTGAAG 1 cut(s) 2680
AcyI GRCGYC 1 cut(s) 2118
AfaI GTAC 6 cut(s) 824, 1053, 1748, 2165, 2423, 2680
AfiI CCNNNNNNNGG 6 cut(s) 624, 1507, 2127, 2268, 2399, 2698
AflIII ACRYGT 2 cut(s) 1230, 2637
AgeI ACCGGT 1 cut(s) 552
AhlI ACTAGT 1 cut(s) 1112
AjnI CCWGG 1 cut(s) 236
AjuI GAANNNNNNNTTGG 2 cut(s) 423, 455
AloI GAACNNNNNNTCC 2 cut(s) 1471, 1503
Alw21I GWGCWC 4 cut(s) 736, 1264, 2000, 2714
Alw26I GTCTC 1 cut(s) 2174
Alw44I GTGCAC 1 cut(s) 2710
AlwI GGATC 2 cut(s) 227, 320
AlwNI CAGNNNCTG 2 cut(s) 1133, 2183
AoxI GGCC 3 cut(s) 3, 1021, 2538
ApaLI GTGCAC 1 cut(s) 2710
ApeKI GCWGC 7 cut(s) 245, 920, 1559, 1906, 2186, 2515, 2627
ApoI RAATTY 4 cut(s) 130, 421, 753, 1164
ArsI GACNNNNNNTTYG 2 cut(s) 2624, 2656
AseI ATTAAT 1 cut(s) 513
AsiGI ACCGGT 1 cut(s) 552
Asp700I GAANNNNTTC 1 cut(s) 336
AspLEI GCGC 1 cut(s) 709
AsuC2I CCSGG 1 cut(s) 1084
AsuHPI GGTGA 7 cut(s) 14, 125, 242, 1609, 1682, 2326, 2681
BaeGI GKGCMC 1 cut(s) 2714
BalI TGGCCA 3 cut(s) 5, 1023, 2540
BanII GRGCYC 2 cut(s) 736, 1194
Bbv12I GWGCWC 4 cut(s) 736, 1264, 2000, 2714
BbvI GCAGC 7 cut(s) 232, 907, 1546, 1918, 2198, 2502, 2639
BccI CCATC 6 cut(s) 64, 624, 768, 1968, 2262, 2669
BciT130I CCWGG 1 cut(s) 238
BclI TGATCA 4 cut(s) 159, 465, 877, 2350
BcnI CCSGG 1 cut(s) 1084
BcoDI GTCTC 1 cut(s) 2174
BcuI ACTAGT 1 cut(s) 1112
BfaI CTAG 8 cut(s) 11, 66, 299, 644, 828, 842, 1113, 2450
BfmI CTRYAG 4 cut(s) 1461, 1904, 2184, 2625
BfuAI ACCTGC 1 cut(s) 2723
BisI GCNGC 8 cut(s) 246, 921, 1467, 1560, 1907, 2187, 2516, 2628
BlsI GCNGC 8 cut(s) 247, 922, 1468, 1561, 1908, 2188, 2517, 2629
BmcAI AGTACT 1 cut(s) 2165
Bme1390I CCNGG 2 cut(s) 238, 1084
BmiI GGNNCC 1 cut(s) 2211
BmrFI CCNGG 2 cut(s) 238, 1084
BmsI GCATC 6 cut(s) 931, 1069, 1342, 1571, 1903, 2502
BoxI GACNNNNGTC 1 cut(s) 102
BplI GAGNNNNNCTC 2 cut(s) 2018, 2050
BpmI CTGGAG 1 cut(s) 2353
BpuEI CTTGAG 3 cut(s) 104, 326, 1553
BpuMI CCSGG 1 cut(s) 1084
BsaAI YACGTR 1 cut(s) 1848
BsaHI GRCGYC 1 cut(s) 2118
BsaJI CCNNGG 2 cut(s) 236, 284
BsaWI WCCGGW 2 cut(s) 552, 1396
BsaXI ACNNNNNCTCC 2 cut(s) 959, 989
Bsc4I CCNNNNNNNGG 6 cut(s) 624, 1507, 2127, 2268, 2399, 2698
Bse118I RCCGGY 1 cut(s) 552
Bse3DI GCAATG 3 cut(s) 255, 1443, 2725
BseBI CCWGG 1 cut(s) 238
BseDI CCNNGG 2 cut(s) 236, 284
BseLI CCNNNNNNNGG 6 cut(s) 624, 1507, 2127, 2268, 2399, 2698
BseMI GCAATG 3 cut(s) 255, 1443, 2725
BseMII CTCAG 3 cut(s) 29, 1968, 2510
BseSI GKGCMC 1 cut(s) 2714
BseXI GCAGC 7 cut(s) 232, 907, 1546, 1918, 2198, 2502, 2639
BsgI GTGCAG 3 cut(s) 906, 1665, 2394
BshFI GGCC 3 cut(s) 5, 1023, 2540
BshTI ACCGGT 1 cut(s) 552
BsiHKAI GWGCWC 4 cut(s) 736, 1264, 2000, 2714
BsiSI CCGG 4 cut(s) 553, 1083, 1397, 1910
BslI CCNNNNNNNGG 6 cut(s) 624, 1507, 2127, 2268, 2399, 2698
BsmAI GTCTC 1 cut(s) 2174
BsmI GAATGC 1 cut(s) 1077
BsnI GGCC 3 cut(s) 5, 1023, 2540
Bsp1286I GDGCHC 5 cut(s) 736, 1194, 1264, 2000, 2714
Bsp1407I TGTACA 2 cut(s) 1746, 2421
Bsp143I GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
Bsp19I CCATGG 1 cut(s) 284
BspACI CCGC 1 cut(s) 1466
BspANI GGCC 3 cut(s) 5, 1023, 2540
BspCNI CTCAG 3 cut(s) 28, 1967, 2511
BspLI GGNNCC 1 cut(s) 2211
BspMAI CTGCAG 3 cut(s) 1908, 2188, 2629
BspMI ACCTGC 1 cut(s) 2723
BspPI GGATC 2 cut(s) 227, 320
BsrDI GCAATG 3 cut(s) 255, 1443, 2725
BsrFI RCCGGY 1 cut(s) 552
BsrGI TGTACA 2 cut(s) 1746, 2421
BssAI RCCGGY 1 cut(s) 552
BssECI CCNNGG 2 cut(s) 236, 284
BssMI GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
BssNI GRCGYC 1 cut(s) 2118
BssT1I CCWWGG 1 cut(s) 284
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 2 cut(s) 1685, 2125
Bst6I CTCTTC 4 cut(s) 297, 1035, 1061, 1668
BstACI GRCGYC 1 cut(s) 2118
BstAPI GCANNNNNTGC 3 cut(s) 149, 2183, 2724
BstAUI TGTACA 2 cut(s) 1746, 2421
BstBAI YACGTR 1 cut(s) 1848
BstC8I GCNNGC 2 cut(s) 456, 1759
BstDEI CTNAG 4 cut(s) 15, 573, 1954, 2519
BstDSI CCRYGG 1 cut(s) 284
BstHHI GCGC 1 cut(s) 709
BstKTI GATC 6 cut(s) 162, 235, 328, 468, 880, 2353
BstMAI GTCTC 1 cut(s) 2174
BstMBI GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
BstNI CCWGG 1 cut(s) 238
BstNSI RCATGY 4 cut(s) 458, 823, 1234, 2641
BstPAI GACNNNNGTC 1 cut(s) 102
BstSCI CCNGG 2 cut(s) 236, 1082
BstSFI CTRYAG 4 cut(s) 1461, 1904, 2184, 2625
BstSLI GKGCMC 1 cut(s) 2714
BstSNI TACGTA 1 cut(s) 1848
BstV1I GCAGC 7 cut(s) 232, 907, 1546, 1918, 2198, 2502, 2639
BsuRI GGCC 3 cut(s) 5, 1023, 2540
BtgI CCRYGG 1 cut(s) 284
BtsIMutI CAGTG 4 cut(s) 141, 1681, 2121, 2377
BveI ACCTGC 1 cut(s) 2723
Cac8I GCNNGC 2 cut(s) 456, 1759
CaiI CAGNNNCTG 2 cut(s) 1133, 2183
CfoI GCGC 1 cut(s) 709
Cfr10I RCCGGY 1 cut(s) 552
CseI GACGC 1 cut(s) 2126
Csp6I GTAC 6 cut(s) 823, 1052, 1747, 2164, 2422, 2679
CspAI ACCGGT 1 cut(s) 552
CspCI CAANNNNNGTGG 2 cut(s) 42, 77
CviQI GTAC 6 cut(s) 823, 1052, 1747, 2164, 2422, 2679
DdeI CTNAG 4 cut(s) 15, 573, 1954, 2519
DpnI GATC 6 cut(s) 161, 234, 327, 467, 879, 2352
DpnII GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
EaeI YGGCCR 3 cut(s) 3, 1021, 2538
Eam1104I CTCTTC 4 cut(s) 297, 1035, 1061, 1668
EarI CTCTTC 4 cut(s) 297, 1035, 1061, 1668
Ecl136II GAGCTC 1 cut(s) 734
Eco105I TACGTA 1 cut(s) 1848
Eco130I CCWWGG 1 cut(s) 284
Eco24I GRGCYC 2 cut(s) 736, 1194
Eco32I GATATC 1 cut(s) 1320
Eco53kI GAGCTC 1 cut(s) 734
Eco57I CTGAAG 1 cut(s) 2680
EcoICRI GAGCTC 1 cut(s) 734
EcoRI GAATTC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 236
EcoRV GATATC 1 cut(s) 1320
EcoT14I CCWWGG 1 cut(s) 284
EcoT22I ATGCAT 1 cut(s) 456
EcoT38I GRGCYC 2 cut(s) 736, 1194
ErhI CCWWGG 1 cut(s) 284
FalI AAGNNNNNCTT 4 cut(s) 1038, 1070, 1595, 1627
FauNDI CATATG 2 cut(s) 2364, 2548
FbaI TGATCA 4 cut(s) 159, 465, 877, 2350
FblI GTMKAC 1 cut(s) 1227
Fnu4HI GCNGC 8 cut(s) 246, 921, 1467, 1560, 1907, 2187, 2516, 2628
FriOI GRGCYC 2 cut(s) 736, 1194
Fsp4HI GCNGC 8 cut(s) 246, 921, 1467, 1560, 1907, 2187, 2516, 2628
FspBI CTAG 8 cut(s) 11, 66, 299, 644, 828, 842, 1113, 2450
GlaI GCGC 1 cut(s) 708
GluI GCNGC 8 cut(s) 246, 921, 1467, 1560, 1907, 2187, 2516, 2628
GsuI CTGGAG 1 cut(s) 2353
HaeIII GGCC 3 cut(s) 5, 1023, 2540
HapII CCGG 4 cut(s) 553, 1083, 1397, 1910
HgaI GACGC 1 cut(s) 2126
HhaI GCGC 1 cut(s) 709
Hin1I GRCGYC 1 cut(s) 2118
Hin6I GCGC 1 cut(s) 707
HinP1I GCGC 1 cut(s) 707
HincII GTYRAC 1 cut(s) 1497
HindII GTYRAC 1 cut(s) 1497
HindIII AAGCTT 3 cut(s) 714, 1638, 2079
HinfI GANTC 9 cut(s) 785, 866, 968, 1378, 1389, 1552, 1650, 2194, 2521
HpaI GTTAAC 1 cut(s) 1497
HpaII CCGG 4 cut(s) 553, 1083, 1397, 1910
HphI GGTGA 7 cut(s) 14, 125, 242, 1609, 1682, 2326, 2681
Hpy166II GTNNAC 6 cut(s) 116, 272, 1228, 1497, 1541, 2712
Hpy188I TCNGA 3 cut(s) 1479, 1769, 2614
Hpy8I GTNNAC 6 cut(s) 116, 272, 1228, 1497, 1541, 2712
Hpy99I CGWCG 2 cut(s) 976, 979
HpyCH4III ACNGT 2 cut(s) 1685, 2125
HpyCH4IV ACGT 2 cut(s) 1847, 2284
HpyF3I CTNAG 4 cut(s) 15, 573, 1954, 2519
HpySE526I ACGT 2 cut(s) 1847, 2284
Hsp92I GRCGYC 1 cut(s) 2118
HspAI GCGC 1 cut(s) 707
Ksp22I TGATCA 4 cut(s) 159, 465, 877, 2350
KspAI GTTAAC 1 cut(s) 1497
Kzo9I GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
LmnI GCTCC 4 cut(s) 50, 1895, 2020, 2334
Lsp1109I GCAGC 7 cut(s) 232, 907, 1546, 1918, 2198, 2502, 2639
LweI GCATC 6 cut(s) 931, 1069, 1342, 1571, 1903, 2502
MaeI CTAG 8 cut(s) 11, 66, 299, 644, 828, 842, 1113, 2450
MaeII ACGT 2 cut(s) 1847, 2284
MaeIII GTNAC 8 cut(s) 208, 997, 1108, 1129, 1405, 1615, 2152, 2522
MalI GATC 6 cut(s) 161, 234, 327, 467, 879, 2352
MboI GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
MfeI CAATTG 1 cut(s) 665
MhlI GDGCHC 5 cut(s) 736, 1194, 1264, 2000, 2714
MlsI TGGCCA 3 cut(s) 5, 1023, 2540
MluNI TGGCCA 3 cut(s) 5, 1023, 2540
MlyI GAGTC 4 cut(s) 977, 1387, 1644, 2530
MmeI TCCRAC 6 cut(s) 72, 195, 426, 2042, 2187, 2286
Mox20I TGGCCA 3 cut(s) 5, 1023, 2540
Mph1103I ATGCAT 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 336
MscI TGGCCA 3 cut(s) 5, 1023, 2540
MslI CAYNNNNRTG 5 cut(s) 762, 1235, 1742, 1832, 2642
Msp20I TGGCCA 3 cut(s) 5, 1023, 2540
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 4 cut(s) 553, 1083, 1397, 1910
MspR9I CCNGG 2 cut(s) 238, 1084
MunI CAATTG 1 cut(s) 665
Mva1269I GAATGC 1 cut(s) 1077
MvaI CCWGG 1 cut(s) 238
NciI CCSGG 1 cut(s) 1084
NcoI CCATGG 1 cut(s) 284
NdeI CATATG 2 cut(s) 2364, 2548
NdeII GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
NlaIV GGNNCC 1 cut(s) 2211
NmuCI GTSAC 5 cut(s) 208, 997, 1405, 1615, 2522
NsiI ATGCAT 1 cut(s) 456
NspI RCATGY 4 cut(s) 458, 823, 1234, 2641
PaeI GCATGC 1 cut(s) 458
PaqCI CACCTGC 1 cut(s) 2723
PciI ACATGT 2 cut(s) 1230, 2637
PcsI WCGNNNNNNNCGW 1 cut(s) 899
PctI GAATGC 1 cut(s) 1077
PdmI GAANNNNTTC 1 cut(s) 336
PfeI GAWTC 5 cut(s) 785, 866, 1389, 1552, 2194
PflMI CCANNNNNTGG 2 cut(s) 2127, 2268
PinAI ACCGGT 1 cut(s) 552
PkrI GCNGC 8 cut(s) 247, 922, 1468, 1561, 1908, 2188, 2517, 2629
PleI GAGTC 4 cut(s) 976, 1386, 1644, 2529
PpsI GAGTC 4 cut(s) 976, 1386, 1644, 2529
Ppu21I YACGTR 1 cut(s) 1848
PscI ACATGT 2 cut(s) 1230, 2637
PshAI GACNNNNGTC 1 cut(s) 102
PshBI ATTAAT 1 cut(s) 513
PsiI TTATAA 1 cut(s) 957
Psp124BI GAGCTC 1 cut(s) 736
Psp6I CCWGG 1 cut(s) 236
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 2211
PstI CTGCAG 3 cut(s) 1908, 2188, 2629
PstNI CAGNNNCTG 2 cut(s) 1133, 2183
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 6 cut(s) 824, 1053, 1748, 2165, 2423, 2680
RsaNI GTAC 6 cut(s) 823, 1052, 1747, 2164, 2422, 2679
RseI CAYNNNNRTG 5 cut(s) 762, 1235, 1742, 1832, 2642
SacI GAGCTC 1 cut(s) 736
SatI GCNGC 8 cut(s) 246, 921, 1467, 1560, 1907, 2187, 2516, 2628
Sau3AI GATC 6 cut(s) 159, 232, 325, 465, 877, 2350
ScaI AGTACT 1 cut(s) 2165
SchI GAGTC 4 cut(s) 977, 1387, 1644, 2530
ScrFI CCNGG 2 cut(s) 238, 1084
SduI GDGCHC 5 cut(s) 736, 1194, 1264, 2000, 2714
SfaNI GCATC 6 cut(s) 931, 1069, 1342, 1571, 1903, 2502
SfcI CTRYAG 4 cut(s) 1461, 1904, 2184, 2625
SmiMI CAYNNNNRTG 5 cut(s) 762, 1235, 1742, 1832, 2642
SmlI CTYRAG 3 cut(s) 119, 341, 1568
SmoI CTYRAG 3 cut(s) 119, 341, 1568
SnaBI TACGTA 1 cut(s) 1848
SpeI ACTAGT 1 cut(s) 1112
SphI GCATGC 1 cut(s) 458
SsiI CCGC 1 cut(s) 1466
SspMI CTAG 8 cut(s) 11, 66, 299, 644, 828, 842, 1113, 2450
SstI GAGCTC 1 cut(s) 736
StyD4I CCNGG 2 cut(s) 236, 1082
StyI CCWWGG 1 cut(s) 284
TaaI ACNGT 2 cut(s) 1685, 2125
TaiI ACGT 2 cut(s) 1850, 2287
TaqI TCGA 6 cut(s) 788, 902, 977, 1194, 1381, 1965
TatI WGTACW 5 cut(s) 822, 1051, 1746, 2163, 2421
TauI GCSGC 1 cut(s) 1469
TfiI GAWTC 5 cut(s) 785, 866, 1389, 1552, 2194
TscAI CASTG 4 cut(s) 141, 1688, 2128, 2377
TseFI GTSAC 5 cut(s) 208, 997, 1405, 1615, 2522
TseI GCWGC 7 cut(s) 245, 920, 1559, 1906, 2186, 2515, 2627
Tsp45I GTSAC 5 cut(s) 208, 997, 1405, 1615, 2522
TspGWI ACGGA 1 cut(s) 2543
TspRI CASTG 4 cut(s) 141, 1688, 2128, 2377
Van91I CCANNNNNTGG 2 cut(s) 2127, 2268
VneI GTGCAC 1 cut(s) 2710
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 4 cut(s) 130, 421, 753, 1164
XbaI TCTAGA 2 cut(s) 643, 827
XceI RCATGY 4 cut(s) 458, 823, 1234, 2641
XcmI CCANNNNNNNNNTGG 1 cut(s) 1031
XmiI GTMKAC 1 cut(s) 1227
XmnI GAANNNNTTC 1 cut(s) 336
XspI CTAG 8 cut(s) 11, 66, 299, 644, 828, 842, 1113, 2450
ZrmI AGTACT 1 cut(s) 2165
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.