Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Reverse (-)

1490426 .. 1495214

Gene Structure 4789 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G03390.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTGCTAAGAGATCTATCTACTGTCTTCTTCTTCTTCCTCTGCTCTTGTCTTTACTGATCTGGATTCCTTCGATCTCCTTAGCTGCTACTAACCCTGATGATGTTGCTGCAATTAACGGATTATTCGCTGCACTTGGAGCACCTGTTCTTCCTGGTTGGATTGCTTCTGGTGGAGACCCATGTGGTGAAGCTTGGCAAGGCATTATCTGCAATGTTTCAGATATTATAAGCATAACTGTAAATGCTGCAAATTTGCAAGGAGAGCTTGGTGACAACTTAGCTAAGTTCACTTCTATCAGGGGAATAGATTTCAGCAACAATCGCATTGGAGGAAGCATACCTTCTACTTTGCCGGTTACATTGCAGCATTTTTTTCTTTCAGCTAATCAGTTCACCGGAAGCATCCCGGAATCTCTAGGAACATTGAGTTTTCTGAATGACATGTCTTTGAACGATAACCTTCTCTCTGGAGAGCTACCCGACGTGTTTCAAAACCTTGTCGGGCTGATTAATCTTGATATATCATCTAACAATATAAGCGGCACATTGCCTCCTTCTATGGAGAATTTATTAACTCTTACAACATTACGTGTTCAGAACAATCAGCTCTCAGGAACTCTGGACGTTCTTCAAGGCCTTCCTCTTCAAGACTTAAACATAGAGAATAACCTCTTCTCTGGACCCATACCGGACAAATTACTAAGCATTCCGAAATTCCTACATGAAGGAAACCCGTTCAATGCCACAATGATCAATTCCACCTCGACTGCACCATCATTGTCTCCGTCTCTATCTCCAACAAAACCAGCTCCAACGCGACCATTTTCTGGAGTTCCACCTCCTCCAAATGAGAGGAATCGAGGGAAAGTTGCTGATGGACCTTCTGATTCAGAAGGATCGAGCTCTGAGAATTCAAAGGGAAAGAACTCTTCACATACTAAAAAGATAATCCTTATTGCATTCGCTGGCGTCCTCGTCTTCATAATTCTGGTTTTGGCAATACTCTTGCTGTTGCCAAAATGTGCAAGACGTAGAGAACATGCTAACAGAGTTTTCAAACCGCATCAAGTTGGTGCTGATAGAGGAAGCAGAGAGAATGCTCTGGAAAACGGGACTCCGGTACTGCCACCACCTGGTCGATCTGAAAAAGTTCAAAGAGAACCCTTCAAGAAAGCTGGAGAGGAACCAAAGGTCTTACATGACCTTGAGAGGCTGCGGAGACCTGCACCTATATCAAGACAGGAAAGTCAAGATATTGACTTTTCAATGTTGATGCCTCCTCCTCCACCACCTCCACCACCACCACCACCTCCTCCTTTGGATGAGAAGGTCACGGTTATGCCAATCATATCACCCGAAAGACCCGTTAAGAAAACTTCCCCTAAACGCTTACCCTTAACTTCTGTGAAGCACTATTCTATTGCTTCTCTTCAACAATACACGGAAAGCTTCGCTCAGGAAAATCTCATTGGCTCAGGCATGCTCGGTAGTGTTTATAGGGCCCGGCTTCCCAATGGAAAGTTGTTTGCTGTCAAGAAGTTGGACAAGAGGGCTTCTGAACAACAACAGGATCACGAATTTATCGAACTAGTGAACAATATAGATATGATTCGCCACTCCAATATCGTTGAACTTGTGGGTTACTGTGCTGAGCACGATCAAAGACTATTGGTCTACGAATATTGCAGTAACGGTACGTTACAAGACGGGTTGCATTCAGACGATGAATTCAAGAAGAAACTTTCGTGGAATACCCGTGTCAGTATGGCACTTGGAGCTGCTAGAGCCCTTGAGTACTTGCATGAGGTGTGTGAACCACCTATCATACACAGAAACTTCAAATCAGCCAATGTTCTACTCGACGATGACCTGAGTGTTCTTGTCTCAGATTGTGGTTTGGCCCCACTAATATCATCAGGCTCTGTGAGTCAGTTATCAGGGCAATTGCTAGCCGCTTACGGATATGGAGCTCCAGAGTTCGACTCTGGAATCTATACATGGCAGAGTGATGTATATAGTTTTGGTGTTGTTATGTTAGAACTATTGACGGGTAGAATGTCCTACGATAGGGACCGGAGTAGAGGAGAGCAGTTCTTGGTGAGGTGGGCAATCCCACAGCTTCATGATATCGATGCATTGGGCAAAATGGTTGATCCATCTCTTAATGGACAATACCCTGCAAAGTCATTGTCACACTTTGCTGATATAATATCCCGGTGTGTTCAGTCTGAACCAGAATTTAGACCACTGATGTCAGAAGTTGTTCAAGATCTACTAGATATGATCAGAAGAGAGCGTCATGGTTCGGGTGATTCTACCGCGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

776

Amino Acids

84.72

Weight (kDa)

5.74

Isoelectric Point (pI)

47.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	486 - 758	3.2e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	488 - 759	1.9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	230
AasI	GACNNNNNNGTC	1 cut(s)	1248
Acc36I	ACCTGC	1 cut(s)	1234
AccB7I	CCANNNNNTGG	2 cut(s)	830, 1136
AccI	GTMKAC	1 cut(s)	1677
AccII	CGCG	2 cut(s)	820, 2324
AciI	CCGC	6 cut(s)	543, 1064, 1219, 1956, 2322, 2324
AclWI	GGATC	3 cut(s)	907, 1581, 2150
AcsI	RAATTY	7 cut(s)	253, 568, 716, 913, 1580, 1730, 2240
AcyI	GRCGYC	1 cut(s)	972
AfaI	GTAC	3 cut(s)	1125, 1699, 1799
AfiI	CCNNNNNNNGG	3 cut(s)	830, 1136, 2070
AflIII	ACRYGT	3 cut(s)	444, 486, 592
AhdI	GACNNNNNGTC	1 cut(s)	1673
AhlI	ACTAGT	1 cut(s)	1591
AjiI	CACGTC	1 cut(s)	487
AjnI	CCWGG	2 cut(s)	154, 1135
AjuI	GAANNNNNNNTTGG	2 cut(s)	1455, 1487
AloI	GAACNNNNNNTCC	2 cut(s)	132, 164
Alw21I	GWGCWC	4 cut(s)	145, 908, 1659, 1975
Alw26I	GTCTC	5 cut(s)	171, 789, 795, 1216, 1891
AlwI	GGATC	3 cut(s)	907, 1581, 2150
AlwNI	CAGNNNCTG	1 cut(s)	1925
AoxI	GGCC	3 cut(s)	637, 1503, 1902
ApaI	GGGCCC	1 cut(s)	1507
ApeKI	GCWGC	8 cut(s)	5, 86, 110, 131, 248, 367, 1216, 1781
ApoI	RAATTY	7 cut(s)	253, 568, 716, 913, 1580, 1730, 2240
ArsI	GACNNNNNNTTYG	2 cut(s)	2177, 2209
AseI	ATTAAT	1 cut(s)	513
Asp700I	GAANNNNTTC	2 cut(s)	1152, 2265
AspS9I	GGNCC	6 cut(s)	683, 881, 1503, 1504, 1903, 2074
AsuC2I	CCSGG	3 cut(s)	410, 1507, 2218
AsuHPI	GGTGA	6 cut(s)	200, 284, 388, 1347, 2113, 2324
AsuNHI	GCTAGC	1 cut(s)	1951
AvaII	GGWCC	3 cut(s)	683, 881, 2074
BaeGI	GKGCMC	1 cut(s)	1507
BanII	GRGCYC	4 cut(s)	908, 1507, 1792, 1975
BbsI	GAAGAC	2 cut(s)	20, 973
Bbv12I	GWGCWC	4 cut(s)	145, 908, 1659, 1975
BbvI	GCAGC	7 cut(s)	73, 97, 118, 235, 379, 1203, 1768
BccI	CCATC	3 cut(s)	784, 872, 2167
BciT130I	CCWGG	2 cut(s)	156, 1137
BclI	TGATCA	2 cut(s)	753, 2286
BcnI	CCSGG	3 cut(s)	410, 1507, 2218
BcoDI	GTCTC	5 cut(s)	171, 789, 795, 1216, 1891
BcuI	ACTAGT	1 cut(s)	1591
BfaI	CTAG	6 cut(s)	419, 1592, 1785, 1952, 2279, 2329
BfuAI	ACCTGC	1 cut(s)	1234
BglII	AGATCT	2 cut(s)	14, 2272
BlpI	GCTNAGC	1 cut(s)	1653
BmcAI	AGTACT	1 cut(s)	1799
Bme1390I	CCNGG	5 cut(s)	156, 410, 1137, 1507, 2218
Bme18I	GGWCC	3 cut(s)	683, 881, 2074
BmeRI	GACNNNNNGTC	1 cut(s)	1673
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	6 cut(s)	683, 881, 1503, 1504, 1903, 2074
BmiI	GGNNCC	5 cut(s)	685, 1188, 1505, 1905, 2075
BmrFI	CCNGG	5 cut(s)	156, 410, 1137, 1507, 2218
BmsI	GCATC	4 cut(s)	414, 1075, 1266, 2125
BmtI	GCTAGC	1 cut(s)	1955
BpiI	GAAGAC	2 cut(s)	20, 973
BplI	GAGNNNNNCTC	2 cut(s)	1970, 2002
BpmI	CTGGAG	4 cut(s)	492, 852, 1200, 1959
Bpu10I	CCTNAGC	3 cut(s)	82, 1458, 1477
Bpu1102I	GCTNAGC	1 cut(s)	1653
BpuEI	CTTGAG	2 cut(s)	1229, 1814
BpuMI	CCSGG	3 cut(s)	410, 1507, 2218
Bsa29I	ATCGAT	1 cut(s)	2133
BsaAI	YACGTR	1 cut(s)	593
BsaHI	GRCGYC	1 cut(s)	972
BsaI	GGTCTC	2 cut(s)	171, 1216
BsaJI	CCNNGG	1 cut(s)	2322
BsaWI	WCCGGW	4 cut(s)	398, 691, 1120, 2076
BsaXI	ACNNNNNCTCC	4 cut(s)	132, 162, 538, 568
Bsc4I	CCNNNNNNNGG	3 cut(s)	830, 1136, 2070
Bse118I	RCCGGY	1 cut(s)	355
Bse3DI	GCAATG	3 cut(s)	220, 362, 548
BseBI	CCWGG	2 cut(s)	156, 1137
BseCI	ATCGAT	1 cut(s)	2133
BseDI	CCNNGG	1 cut(s)	2322
BseGI	GGATG	2 cut(s)	405, 1330
BseLI	CCNNNNNNNGG	3 cut(s)	830, 1136, 2070
BseMI	GCAATG	3 cut(s)	220, 362, 548
BseMII	CTCAG	7 cut(s)	627, 900, 1472, 1491, 1644, 1865, 1902
BseRI	GAGGAG	5 cut(s)	834, 1272, 1275, 1305, 2100
BseSI	GKGCMC	1 cut(s)	1507
BseXI	GCAGC	7 cut(s)	73, 97, 118, 235, 379, 1203, 1768
BsgI	GTGCAG	3 cut(s)	117, 756, 1212
Bsh1236I	CGCG	2 cut(s)	820, 2324
BshFI	GGCC	3 cut(s)	639, 1505, 1904
BshVI	ATCGAT	1 cut(s)	2133
BsiHKAI	GWGCWC	4 cut(s)	145, 908, 1659, 1975
BsiSI	CCGG	8 cut(s)	356, 399, 410, 692, 1121, 1507, 2077, 2218
BslFI	GGGAC	2 cut(s)	1129, 2087
BslI	CCNNNNNNNGG	3 cut(s)	830, 1136, 2070
BsmAI	GTCTC	5 cut(s)	171, 789, 795, 1216, 1891
BsmBI	CGTCTC	1 cut(s)	795
BsmFI	GGGAC	2 cut(s)	1129, 2087
BsmI	GAATGC	4 cut(s)	708, 962, 1105, 1717
BsnI	GGCC	3 cut(s)	639, 1505, 1904
Bso31I	GGTCTC	2 cut(s)	171, 1216
Bsp120I	GGGCCC	1 cut(s)	1503
Bsp1286I	GDGCHC	6 cut(s)	145, 908, 1507, 1659, 1792, 1975
Bsp1720I	GCTNAGC	1 cut(s)	1653
BspACI	CCGC	6 cut(s)	543, 1064, 1219, 1956, 2322, 2324
BspANI	GGCC	3 cut(s)	639, 1505, 1904
BspCNI	CTCAG	7 cut(s)	626, 901, 1471, 1490, 1645, 1866, 1901
BspDI	ATCGAT	1 cut(s)	2133
BspFNI	CGCG	2 cut(s)	820, 2324
BspHI	TCATGA	1 cut(s)	2125
BspLI	GGNNCC	5 cut(s)	685, 1188, 1505, 1905, 2075
BspMI	ACCTGC	1 cut(s)	1234
BspOI	GCTAGC	1 cut(s)	1955
BspPI	GGATC	3 cut(s)	907, 1581, 2150
BspTNI	GGTCTC	2 cut(s)	171, 1216
BsrDI	GCAATG	3 cut(s)	220, 362, 548
BsrFI	RCCGGY	1 cut(s)	355
BssAI	RCCGGY	1 cut(s)	355
BssECI	CCNNGG	1 cut(s)	2322
BssNI	GRCGYC	1 cut(s)	972
Bst2UI	CCWGG	2 cut(s)	156, 1137
Bst4CI	ACNGT	5 cut(s)	26, 241, 1339, 1649, 1697
Bst6I	CTCTTC	5 cut(s)	651, 680, 937, 1437, 2287
BstACI	GRCGYC	1 cut(s)	972
BstAPI	GCANNNNNTGC	1 cut(s)	210
BstBAI	YACGTR	1 cut(s)	593
BstC8I	GCNNGC	3 cut(s)	970, 1484, 1953
BstDSI	CCRYGG	1 cut(s)	2322
BstENI	CCTNNNNNAGG	1 cut(s)	2068
BstF5I	GGATG	2 cut(s)	405, 1330
BstFNI	CGCG	2 cut(s)	820, 2324
BstMAI	GTCTC	5 cut(s)	171, 789, 795, 1216, 1891
BstMWI	GCNNNNNNNGC	6 cut(s)	140, 210, 265, 324, 1778, 1787
BstNI	CCWGG	2 cut(s)	156, 1137
BstNSI	RCATGY	3 cut(s)	448, 1046, 1486
BstSCI	CCNGG	5 cut(s)	154, 408, 1135, 1505, 2216
BstSLI	GKGCMC	1 cut(s)	1507
BstUI	CGCG	2 cut(s)	820, 2324
BstV1I	GCAGC	7 cut(s)	73, 97, 118, 235, 379, 1203, 1768
BstV2I	GAAGAC	2 cut(s)	20, 973
BstX2I	RGATCY	2 cut(s)	14, 2272
BstYI	RGATCY	2 cut(s)	14, 2272
Bsu15I	ATCGAT	1 cut(s)	2133
BsuRI	GGCC	3 cut(s)	639, 1505, 1904
BsuTUI	ATCGAT	1 cut(s)	2133
BtgI	CCRYGG	1 cut(s)	2322
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	2 cut(s)	405, 1330
BtsIMutI	CAGTG	1 cut(s)	2249
BveI	ACCTGC	1 cut(s)	1234
Cac8I	GCNNGC	3 cut(s)	970, 1484, 1953
CaiI	CAGNNNCTG	1 cut(s)	1925
CciI	TCATGA	1 cut(s)	2125
Cfr10I	RCCGGY	1 cut(s)	355
Cfr13I	GGNCC	6 cut(s)	683, 881, 1503, 1504, 1903, 2074
Cfr42I	CCGCGG	1 cut(s)	2325
ClaI	ATCGAT	1 cut(s)	2133
CseI	GACGC	2 cut(s)	961, 2288
CsiI	ACCWGGT	1 cut(s)	1135
Csp6I	GTAC	3 cut(s)	1124, 1698, 1798
CviQI	GTAC	3 cut(s)	1124, 1698, 1798
DrdI	GACNNNNNNGTC	1 cut(s)	1248
DriI	GACNNNNNGTC	1 cut(s)	1673
DseDI	GACNNNNNNGTC	1 cut(s)	1248
Eam1104I	CTCTTC	5 cut(s)	651, 680, 937, 1437, 2287
Eam1105I	GACNNNNNGTC	1 cut(s)	1673
EarI	CTCTTC	5 cut(s)	651, 680, 937, 1437, 2287
Ecl136II	GAGCTC	2 cut(s)	906, 1973
Eco147I	AGGCCT	1 cut(s)	639
Eco24I	GRGCYC	4 cut(s)	908, 1507, 1792, 1975
Eco31I	GGTCTC	2 cut(s)	171, 1216
Eco32I	GATATC	1 cut(s)	2131
Eco47I	GGWCC	3 cut(s)	683, 881, 2074
Eco53kI	GAGCTC	2 cut(s)	906, 1973
EcoICRI	GAGCTC	2 cut(s)	906, 1973
EcoNI	CCTNNNNNAGG	1 cut(s)	2068
EcoO109I	RGGNCCY	1 cut(s)	1503
EcoRI	GAATTC	2 cut(s)	913, 1730
EcoRII	CCWGG	2 cut(s)	154, 1135
EcoRV	GATATC	1 cut(s)	2131
EcoT22I	ATGCAT	1 cut(s)	2140
EcoT38I	GRGCYC	4 cut(s)	908, 1507, 1792, 1975
Esp3I	CGTCTC	1 cut(s)	795
FalI	AAGNNNNNCTT	4 cut(s)	252, 284, 328, 360
FaqI	GGGAC	2 cut(s)	1129, 2087
FbaI	TGATCA	2 cut(s)	753, 2286
FblI	GTMKAC	1 cut(s)	1677
FokI	GGATG	2 cut(s)	392, 1337
FriOI	GRGCYC	4 cut(s)	908, 1507, 1792, 1975
FspBI	CTAG	6 cut(s)	419, 1592, 1785, 1952, 2279, 2329
GsuI	CTGGAG	4 cut(s)	492, 852, 1200, 1959
HaeIII	GGCC	3 cut(s)	639, 1505, 1904
HapII	CCGG	8 cut(s)	356, 399, 410, 692, 1121, 1507, 2077, 2218
HgaI	GACGC	2 cut(s)	961, 2288
Hin1I	GRCGYC	1 cut(s)	972
HindIII	AAGCTT	2 cut(s)	192, 1450
HpaII	CCGG	8 cut(s)	356, 399, 410, 692, 1121, 1507, 2077, 2218
HphI	GGTGA	6 cut(s)	200, 284, 388, 1347, 2113, 2324
Hpy166II	GTNNAC	5 cut(s)	291, 396, 1597, 1678, 1817
Hpy8I	GTNNAC	5 cut(s)	291, 396, 1597, 1678, 1817
Hpy99I	CGWCG	2 cut(s)	488, 1868
HpyCH4III	ACNGT	5 cut(s)	26, 241, 1339, 1649, 1697
HpyCH4IV	ACGT	5 cut(s)	486, 592, 627, 1033, 1700
HpyF10VI	GCNNNNNNNGC	6 cut(s)	140, 210, 265, 324, 1778, 1787
HpySE526I	ACGT	5 cut(s)	486, 592, 627, 1033, 1700
Hsp92I	GRCGYC	1 cut(s)	972
Ksp22I	TGATCA	2 cut(s)	753, 2286
KspI	CCGCGG	1 cut(s)	2325
LmnI	GCTCC	5 cut(s)	140, 817, 1778, 1970, 1978
Lsp1109I	GCAGC	7 cut(s)	73, 97, 118, 235, 379, 1203, 1768
LweI	GCATC	4 cut(s)	414, 1075, 1266, 2125
MabI	ACCWGGT	1 cut(s)	1135
MaeI	CTAG	6 cut(s)	419, 1592, 1785, 1952, 2279, 2329
MaeII	ACGT	5 cut(s)	486, 592, 627, 1033, 1700
MaeIII	GTNAC	7 cut(s)	272, 358, 1333, 1643, 1691, 1701, 2193
MfeI	CAATTG	1 cut(s)	1946
MflI	RGATCY	2 cut(s)	14, 2272
MhlI	GDGCHC	6 cut(s)	145, 908, 1507, 1659, 1792, 1975
MlyI	GAGTC	3 cut(s)	1111, 1939, 1979
MmeI	TCCRAC	4 cut(s)	140, 824, 839, 1524
Mph1103I	ATGCAT	1 cut(s)	2140
MroXI	GAANNNNTTC	2 cut(s)	1152, 2265
MseI	TTAA	7 cut(s)	117, 513, 575, 656, 1371, 1400, 2166
MslI	CAYNNNNRTG	1 cut(s)	1340
MspA1I	CMGCKG	1 cut(s)	2324
MspI	CCGG	8 cut(s)	356, 399, 410, 692, 1121, 1507, 2077, 2218
MspR9I	CCNGG	5 cut(s)	156, 410, 1137, 1507, 2218
MunI	CAATTG	1 cut(s)	1946
Mva1269I	GAATGC	4 cut(s)	708, 962, 1105, 1717
MvaI	CCWGG	2 cut(s)	156, 1137
MvnI	CGCG	2 cut(s)	820, 2324
MwoI	GCNNNNNNNGC	6 cut(s)	140, 210, 265, 324, 1778, 1787
NciI	CCSGG	3 cut(s)	410, 1507, 2218
NheI	GCTAGC	1 cut(s)	1951
NlaIV	GGNNCC	5 cut(s)	685, 1188, 1505, 1905, 2075
NmuCI	GTSAC	3 cut(s)	272, 1333, 2193
NsiI	ATGCAT	1 cut(s)	2140
NspI	RCATGY	3 cut(s)	448, 1046, 1486
PaeI	GCATGC	1 cut(s)	1486
PagI	TCATGA	1 cut(s)	2125
PceI	AGGCCT	1 cut(s)	639
PciI	ACATGT	1 cut(s)	444
PcsI	WCGNNNNNNNCGW	1 cut(s)	1584
PctI	GAATGC	4 cut(s)	708, 962, 1105, 1717
PdmI	GAANNNNTTC	2 cut(s)	1152, 2265
PfeI	GAWTC	7 cut(s)	67, 413, 859, 890, 1612, 1992, 2315
PflMI	CCANNNNNTGG	2 cut(s)	830, 1136
PfoI	TCCNGGA	1 cut(s)	408
PleI	GAGTC	3 cut(s)	1111, 1938, 1979
PpsI	GAGTC	3 cut(s)	1111, 1938, 1979
Ppu21I	YACGTR	1 cut(s)	593
PscI	ACATGT	1 cut(s)	444
PshBI	ATTAAT	1 cut(s)	513
PsiI	TTATAA	1 cut(s)	230
Psp124BI	GAGCTC	2 cut(s)	908, 1975
Psp6I	CCWGG	2 cut(s)	154, 1135
PspGI	CCWGG	2 cut(s)	154, 1135
PspN4I	GGNNCC	5 cut(s)	685, 1188, 1505, 1905, 2075
PspOMI	GGGCCC	1 cut(s)	1503
PspPI	GGNCC	6 cut(s)	683, 881, 1503, 1504, 1903, 2074
PstNI	CAGNNNCTG	1 cut(s)	1925
PsuI	RGATCY	2 cut(s)	14, 2272
RsaI	GTAC	3 cut(s)	1125, 1699, 1799
RsaNI	GTAC	3 cut(s)	1124, 1698, 1798
RseI	CAYNNNNRTG	1 cut(s)	1340
SacI	GAGCTC	2 cut(s)	908, 1975
SacII	CCGCGG	1 cut(s)	2325
SaqAI	TTAA	7 cut(s)	117, 513, 575, 656, 1371, 1400, 2166
Sau96I	GGNCC	6 cut(s)	683, 881, 1503, 1504, 1903, 2074
ScaI	AGTACT	1 cut(s)	1799
SchI	GAGTC	3 cut(s)	1111, 1939, 1979
ScrFI	CCNGG	5 cut(s)	156, 410, 1137, 1507, 2218
SduI	GDGCHC	6 cut(s)	145, 908, 1507, 1659, 1792, 1975
SexAI	ACCWGGT	1 cut(s)	1135
SfaNI	GCATC	4 cut(s)	414, 1075, 1266, 2125
Sfr303I	CCGCGG	1 cut(s)	2325
SgrBI	CCGCGG	1 cut(s)	2325
SinI	GGWCC	3 cut(s)	683, 881, 2074
SmiMI	CAYNNNNRTG	1 cut(s)	1340
SmlI	CTYRAG	2 cut(s)	1208, 1793
SmoI	CTYRAG	2 cut(s)	1208, 1793
SpeI	ACTAGT	1 cut(s)	1591
SphI	GCATGC	1 cut(s)	1486
SseBI	AGGCCT	1 cut(s)	639
SsiI	CCGC	6 cut(s)	543, 1064, 1219, 1956, 2322, 2324
SspI	AATATT	1 cut(s)	1685
SspMI	CTAG	6 cut(s)	419, 1592, 1785, 1952, 2279, 2329
SstI	GAGCTC	2 cut(s)	908, 1975
StuI	AGGCCT	1 cut(s)	639
StyD4I	CCNGG	5 cut(s)	154, 408, 1135, 1505, 2216
TaaI	ACNGT	5 cut(s)	26, 241, 1339, 1649, 1697
TaiI	ACGT	5 cut(s)	489, 595, 630, 1036, 1703
TaqI	TCGA	9 cut(s)	74, 767, 862, 902, 1141, 1587, 1863, 1983, 2133
TatI	WGTACW	1 cut(s)	1797
TauI	GCSGC	2 cut(s)	546, 1958
TfiI	GAWTC	7 cut(s)	67, 413, 859, 890, 1612, 1992, 2315
Tru1I	TTAA	7 cut(s)	117, 513, 575, 656, 1371, 1400, 2166
Tru9I	TTAA	7 cut(s)	117, 513, 575, 656, 1371, 1400, 2166
TscAI	CASTG	1 cut(s)	2256
TseFI	GTSAC	3 cut(s)	272, 1333, 2193
TseI	GCWGC	8 cut(s)	5, 86, 110, 131, 248, 367, 1216, 1781
Tsp45I	GTSAC	3 cut(s)	272, 1333, 2193
TspDTI	ATGAA	4 cut(s)	741, 973, 1743, 2114
TspGWI	ACGGA	4 cut(s)	135, 777, 1460, 1977
TspRI	CASTG	1 cut(s)	2256
Van91I	CCANNNNNTGG	2 cut(s)	830, 1136
VpaK11BI	GGWCC	3 cut(s)	683, 881, 2074
VspI	ATTAAT	1 cut(s)	513
XagI	CCTNNNNNAGG	1 cut(s)	2068
XapI	RAATTY	7 cut(s)	253, 568, 716, 913, 1580, 1730, 2240
XceI	RCATGY	3 cut(s)	448, 1046, 1486
XmiI	GTMKAC	1 cut(s)	1677
XmnI	GAANNNNTTC	2 cut(s)	1152, 2265
XspI	CTAG	6 cut(s)	419, 1592, 1785, 1952, 2279, 2329
ZrmI	AGTACT	1 cut(s)	1799
Zsp2I	ATGCAT	1 cut(s)	2140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.