Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Forward (+)

6800954 .. 6807648

Gene Structure 6695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1081400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGGAAGGAAGAGATCTGTTTTGGAGCACAAGAAGTTGAAGATCTATGCTGAGGTTTCAGTGGGGTTGCTTCTGATCTACTTTGCTCAAGTTTCTCTTGGAGCAACTAGTTCTACTGATGTTGCTGCAATTAACAACTTACATGCTTCGCTTGGCACACCTGTTCTTCCCGGGTGGACTTCTGCTGGAGGAGACCCGTGTGGTGAAGCATGGCAAGGTGTTCAATGCAACGATTCTATAATATTGGGAATTGTTCTTAATGGCGCTAATTTGGGAGGAGAACTGGGTGAACACTTGGGAATGTTTTCTTCAATACGGGCAATAGATCTAAGCAACAACCATATCGGGGGAAGTATTCCATCCAGTTTACCTGCTACCCTGCAAAGCTTTTTTCTTTCAGCTAACCAATTCACCGGAAGCATCCCAGATTCTATAGCCTCGTTAGCTGTGCTCACAGCAATGTCTCTTAATAATAATCAATTAACTGGAGAAATACCAGATTCCTTTCAGAGCATTCCAGGGTTGACCAACTTAGATATTTCCAGTAACAATTTGAGCGGCCAACTGCCACCCTCTCTAGGAAGCCTGACAACTCTGACCACTCTACATTTGCAGAACAATCAGCTGTCTGGAACCCTCGATGTTTTGCAGGATCTTCCCCTAAGCGACTTGAATATAGAGAACAACCTTTTTACTGGACCCATACCTGAAAAGTTGCTGAGCATCCCGAATTTCAAAAAAGATGGGAATCCATTCAATGCTTCTCTTGCTCCAGTCCCTCCACCAACATCACCCACATCTCCATCGAGTCCGCCAGCACCTCCGCTAGCATTTTGGGGACCACCTACTGGGAAGACACCTGGAAGAAGTCCTCCAAAAAATGGGAAATCGGCTGATGGACCATCTTCACAAGATGCATCAAATTCTGGAAAACCGAAGAAATTTCTAACTAAGAAAAGGGTGGTTGGAATATCAATTGGAGGGGCTTTGGTGTTTATTATTTTGATTCTAGCGATTCTGTTTTTCATGCCAAGACGTAGTAGACGAAGAGAAGAGGCTGACAGAATTTCCAAGCGGCATCAAATAGGTGCATATACAGGTGACAGGGAAAACCCTCCCAGGGACGATGGGTCCTTGGTGGTTCAACCAACCAATCAAATGCAGAAAGTTCCAAAAGAAGTTGTGAGGCCCAAAGAGGATAATGAGCCAGAAACCAGAAGAACATGGGCAATTCCAAAGCCAAATGATGAGCAAGACAGAAAGGTACATAGAATGGCCGCAGCACCAAAGCGAGAGGATAGTTTGAGTGCACTTGATTTGTATTCAATACCTCCTCCTCCTCCACCTCCCCCTCCTCCAACACTGCCTGTTCAGAAGGTCATTGTGAAGCCAACTGTGCCCACCAAACTGCCTACACAGAAGCCTTCCACCAAAAGTCCAAATCGTACAATTTCTGCGAAGTCGTTTACCATTGCTTCCCTTCAGCAACATACAAACAGCTTCTCTCCGGATAACCTTCTAGGATCAGGCATGCTGGGAAGTGTCTATAGGGCACAGCTACCTAGCGGAAAGCTACTTGCAGTCAAGAAATTGGACAAGAGAGCTTCTAGTCAGCAGAAAGATGACGAGTTCCTTGAACTGGTAGACAACATTGACAGAATCAGGCATGCTAATGTTGTCGAGCTTATGGGTTACTGTGCAGAGCATGGTCAAAGGCTTCTTATCTATGAGTATTGCAGTAATGGTTCACTGCATGATGCTCTGCACATGGATGACGAATTCAAGAAGAAACTCCCCTGGAATGCTCGTATTAGAATGGCACTTGAAGCTGCAAGAGCCTTAGAGTATTTACATGAAATCTGTGAGCCACCTATTGTACACAGAAATTTCAAGGCTGCCAACCTTCTCCTTGATGATGACCTTTCCGTGCATGTTTCTGACTGTGGCTTGGCTCCATTGATTTCATCAGGCTCCGTTAGTCAGTTGTCAGGACATCTGCTAGCGGCCTATGGTTATGGAGCTCCAGAATTTGAGTCTGGAATTTATACTCGTCAGAGTGATGTTTACAGCTTTGGGGTGGTAATGTTGGAACTATTAACAGGCCGAAAGTCCTATGACAGCACAAGGAGCCGAGGGGAGCAATTCCTTGTTAGATGGGCCACTACCCAGCTACATGACATTGATGCATTATCGAGGATGGTCGATCCTTCTCTAAATGGACAATATCCTACAAAGTCTTTATCGCACTTTGCAGACATTATATCTCGATGCGTTCAGTCGGAACCAGAGTTCAGGCCACCAATGTCTGAAGTTGTTCAAGACCTGTTAGACATGATACGGCGAGAGCCTAATGGCAGTGGATCAAGTGAAGACTCGCATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

795

Amino Acids

86.25

Weight (kDa)

7.04

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	126 - 185	2.1e-07	Leucine rich repeat
Pkinase	PF00069	504 - 774	2.6e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	505 - 775	1.5e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	379
AccB7I	CCANNNNNTGG	2 cut(s)	848, 881
AccBSI	CCGCTC	1 cut(s)	558
AccI	GTMKAC	2 cut(s)	1042, 1644
AccIII	TCCGGA	1 cut(s)	1507
AciI	CCGC	7 cut(s)	558, 812, 824, 1075, 1278, 1566, 2003
AclWI	GGATC	4 cut(s)	660, 1531, 2198, 2368
AcoI	YGGCCR	2 cut(s)	559, 1275
AcsI	RAATTY	8 cut(s)	730, 922, 941, 1065, 1778, 1885, 2027, 2040
AcuI	CTGAAG	2 cut(s)	1466, 2328
AfaI	GTAC	3 cut(s)	1266, 1447, 1878
AfiI	CCNNNNNNNGG	6 cut(s)	346, 578, 848, 881, 1120, 1639
AhdI	GACNNNNNGTC	1 cut(s)	1129
AhlI	ACTAGT	1 cut(s)	107
AjnI	CCWGG	4 cut(s)	517, 859, 1118, 1796
AloI	GAACNNNNNNTCC	2 cut(s)	2273, 2305
Alw21I	GWGCWC	4 cut(s)	30, 453, 1312, 2023
Alw26I	GTCTC	2 cut(s)	186, 468
Alw44I	GTGCAC	1 cut(s)	1308
AlwI	GGATC	4 cut(s)	660, 1531, 2198, 2368
Ama87I	CYCGRG	1 cut(s)	170
Aor13HI	TCCGGA	1 cut(s)	1507
AoxI	GGCC	7 cut(s)	559, 1187, 1275, 2004, 2101, 2157, 2294
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	4 cut(s)	125, 1280, 1829, 1895
ApoI	RAATTY	8 cut(s)	730, 922, 941, 1065, 1778, 1885, 2027, 2040
Asp700I	GAANNNNTTC	3 cut(s)	304, 752, 2313
AspLEI	GCGC	1 cut(s)	266
AspS9I	GGNCC	6 cut(s)	698, 839, 899, 1131, 1188, 2157
AsuC2I	CCSGG	2 cut(s)	171, 172
AsuHPI	GGTGA	5 cut(s)	215, 299, 403, 783, 1112
AsuNHI	GCTAGC	2 cut(s)	826, 1999
AvaI	CYCGRG	1 cut(s)	170
AvaII	GGWCC	4 cut(s)	698, 839, 899, 1131
BaeGI	GKGCMC	3 cut(s)	1312, 1401, 1555
BanII	GRGCYC	1 cut(s)	2023
BbsI	GAAGAC	2 cut(s)	860, 2376
Bbv12I	GWGCWC	4 cut(s)	30, 453, 1312, 2023
BbvCI	CCTCAGC	1 cut(s)	51
BbvI	GCAGC	4 cut(s)	112, 1292, 1816, 1882
BccI	CCATC	8 cut(s)	367, 737, 811, 890, 910, 1121, 2148, 2191
BceAI	ACGGC	1 cut(s)	2354
BciT130I	CCWGG	4 cut(s)	519, 861, 1120, 1798
BcnI	CCSGG	2 cut(s)	171, 172
BcoDI	GTCTC	2 cut(s)	186, 468
BcuI	ACTAGT	1 cut(s)	107
BfaI	CTAG	8 cut(s)	108, 578, 827, 1010, 1520, 1563, 1608, 2000
BfmI	CTRYAG	2 cut(s)	432, 1546
BfoI	RGCGCY	1 cut(s)	267
BfuAI	ACCTGC	1 cut(s)	379
BglII	AGATCT	3 cut(s)	14, 42, 325
BisI	GCNGC	8 cut(s)	126, 559, 1076, 1278, 1281, 1830, 1896, 2004
BlpI	GCTNAGC	1 cut(s)	719
BlsI	GCNGC	8 cut(s)	127, 560, 1077, 1279, 1282, 1831, 1897, 2005
Bme1390I	CCNGG	6 cut(s)	171, 172, 519, 861, 1120, 1798
Bme18I	GGWCC	4 cut(s)	698, 839, 899, 1131
BmeRI	GACNNNNNGTC	1 cut(s)	1129
BmeT110I	CYCGRG	1 cut(s)	170
BmgT120I	GGNCC	6 cut(s)	698, 839, 899, 1131, 1188, 2157
BmiI	GGNNCC	8 cut(s)	634, 700, 840, 1132, 1953, 1972, 2129, 2283
BmrFI	CCNGG	6 cut(s)	171, 172, 519, 861, 1120, 1798
BmrI	ACTGGG	2 cut(s)	293, 858
BmsI	GCATC	8 cut(s)	429, 732, 904, 926, 1087, 1747, 2173, 2258
BmtI	GCTAGC	2 cut(s)	830, 2003
BmuI	ACTGGG	2 cut(s)	293, 858
BpiI	GAAGAC	2 cut(s)	860, 2376
BpmI	CTGGAG	4 cut(s)	207, 507, 756, 2007
Bpu10I	CCTNAGC	2 cut(s)	51, 662
Bpu1102I	GCTNAGC	1 cut(s)	719
BpuEI	CTTGAG	1 cut(s)	72
BpuMI	CCSGG	2 cut(s)	171, 172
BsaBI	GATNNNNATC	1 cut(s)	747
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	7 cut(s)	170, 518, 1118, 1119, 1134, 1796, 2131
BsaWI	WCCGGW	2 cut(s)	413, 1507
Bsc4I	CCNNNNNNNGG	6 cut(s)	346, 578, 848, 881, 1120, 1639
Bse1I	ACTGG	8 cut(s)	288, 363, 490, 543, 700, 773, 853, 1644
Bse3DI	GCAATG	2 cut(s)	465, 1470
Bse8I	GATNNNNATC	1 cut(s)	747
BseAI	TCCGGA	1 cut(s)	1507
BseBI	CCWGG	4 cut(s)	519, 861, 1120, 1798
BseDI	CCNNGG	7 cut(s)	170, 518, 1118, 1119, 1134, 1796, 2131
BseGI	GGATG	5 cut(s)	359, 420, 723, 1777, 2202
BseJI	GATNNNNATC	1 cut(s)	747
BseLI	CCNNNNNNNGG	6 cut(s)	346, 578, 848, 881, 1120, 1639
BseMI	GCAATG	2 cut(s)	465, 1470
BseMII	CTCAG	2 cut(s)	42, 710
BseNI	ACTGG	8 cut(s)	288, 363, 490, 543, 700, 773, 853, 1644
BseRI	GAGGAG	6 cut(s)	204, 291, 1323, 1326, 1329, 1344
BseSI	GKGCMC	3 cut(s)	1312, 1401, 1555
BseXI	GCAGC	4 cut(s)	112, 1292, 1816, 1882
BseYI	CCCAGC	2 cut(s)	1534, 2166
BsgI	GTGCAG	2 cut(s)	1719, 1748
BshFI	GGCC	7 cut(s)	561, 1189, 1277, 2006, 2103, 2159, 2296
BsiHKAI	GWGCWC	4 cut(s)	30, 453, 1312, 2023
BsiHKCI	CYCGRG	1 cut(s)	170
BsiSI	CCGG	3 cut(s)	171, 414, 1508
BslFI	GGGAC	3 cut(s)	761, 852, 1136
BslI	CCNNNNNNNGG	6 cut(s)	346, 578, 848, 881, 1120, 1639
BsmAI	GTCTC	2 cut(s)	186, 468
BsmFI	GGGAC	3 cut(s)	761, 852, 1136
BsmI	GAATGC	2 cut(s)	513, 1807
BsnI	GGCC	7 cut(s)	561, 1189, 1277, 2006, 2103, 2159, 2296
Bso31I	GGTCTC	1 cut(s)	186
BsoBI	CYCGRG	1 cut(s)	170
Bsp1286I	GDGCHC	6 cut(s)	30, 453, 1312, 1401, 1555, 2023
Bsp13I	TCCGGA	1 cut(s)	1507
Bsp1407I	TGTACA	1 cut(s)	1876
Bsp143I	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
Bsp1720I	GCTNAGC	1 cut(s)	719
BspACI	CCGC	7 cut(s)	558, 812, 824, 1075, 1278, 1566, 2003
BspANI	GGCC	7 cut(s)	561, 1189, 1277, 2006, 2103, 2159, 2296
BspCNI	CTCAG	2 cut(s)	43, 711
BspEI	TCCGGA	1 cut(s)	1507
BspLI	GGNNCC	8 cut(s)	634, 700, 840, 1132, 1953, 1972, 2129, 2283
BspMI	ACCTGC	1 cut(s)	379
BspOI	GCTAGC	2 cut(s)	830, 2003
BspPI	GGATC	4 cut(s)	660, 1531, 2198, 2368
BspTNI	GGTCTC	1 cut(s)	186
BsrBI	CCGCTC	1 cut(s)	558
BsrDI	GCAATG	2 cut(s)	465, 1470
BsrGI	TGTACA	1 cut(s)	1876
BsrI	ACTGG	8 cut(s)	288, 363, 490, 543, 700, 773, 853, 1644
BssECI	CCNNGG	7 cut(s)	170, 518, 1118, 1119, 1134, 1796, 2131
BssMI	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
BssT1I	CCWWGG	1 cut(s)	1134
Bst2UI	CCWGG	4 cut(s)	519, 861, 1120, 1798
Bst4CI	ACNGT	3 cut(s)	1396, 1697, 1943
Bst6I	CTCTTC	3 cut(s)	5, 1042, 1047
BstAUI	TGTACA	1 cut(s)	1876
BstC8I	GCNNGC	5 cut(s)	816, 828, 1532, 1668, 2001
BstDEI	CTNAG	7 cut(s)	51, 329, 532, 662, 719, 951, 1840
BstF5I	GGATG	5 cut(s)	359, 420, 723, 1777, 2202
BstH2I	RGCGCY	1 cut(s)	267
BstHHI	GCGC	1 cut(s)	266
BstKTI	GATC	8 cut(s)	17, 45, 78, 328, 655, 1526, 2206, 2363
BstMAI	GTCTC	2 cut(s)	186, 468
BstMBI	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
BstMWI	GCNNNNNNNGC	6 cut(s)	443, 767, 1396, 1826, 1835, 2127
BstNI	CCWGG	4 cut(s)	519, 861, 1120, 1798
BstNSI	RCATGY	4 cut(s)	146, 1534, 1670, 1934
BstSCI	CCNGG	6 cut(s)	169, 170, 517, 859, 1118, 1796
BstSFI	CTRYAG	2 cut(s)	432, 1546
BstSLI	GKGCMC	3 cut(s)	1312, 1401, 1555
BstV1I	GCAGC	4 cut(s)	112, 1292, 1816, 1882
BstV2I	GAAGAC	2 cut(s)	860, 2376
BstX2I	RGATCY	4 cut(s)	14, 42, 325, 652
BstYI	RGATCY	4 cut(s)	14, 42, 325, 652
BsuRI	GGCC	7 cut(s)	561, 1189, 1277, 2006, 2103, 2159, 2296
BtsCI	GGATG	5 cut(s)	359, 420, 723, 1777, 2202
BtsI	GCAGTG	3 cut(s)	1361, 1748, 2362
BtsIMutI	CAGTG	4 cut(s)	66, 1361, 1748, 2362
BveI	ACCTGC	1 cut(s)	379
Cac8I	GCNNGC	5 cut(s)	816, 828, 1532, 1668, 2001
CfoI	GCGC	1 cut(s)	266
Cfr13I	GGNCC	6 cut(s)	698, 839, 899, 1131, 1188, 2157
Cfr9I	CCCGGG	1 cut(s)	170
Csp6I	GTAC	3 cut(s)	1265, 1446, 1877
CviQI	GTAC	3 cut(s)	1265, 1446, 1877
DdeI	CTNAG	7 cut(s)	51, 329, 532, 662, 719, 951, 1840
DpnI	GATC	8 cut(s)	16, 44, 77, 327, 654, 1525, 2205, 2362
DpnII	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
DriI	GACNNNNNGTC	1 cut(s)	1129
EaeI	YGGCCR	2 cut(s)	559, 1275
Eam1104I	CTCTTC	3 cut(s)	5, 1042, 1047
Eam1105I	GACNNNNNGTC	1 cut(s)	1129
EarI	CTCTTC	3 cut(s)	5, 1042, 1047
EciI	GGCGGA	1 cut(s)	801
Ecl136II	GAGCTC	1 cut(s)	2021
Eco130I	CCWWGG	1 cut(s)	1134
Eco24I	GRGCYC	1 cut(s)	2023
Eco31I	GGTCTC	1 cut(s)	186
Eco47I	GGWCC	4 cut(s)	698, 839, 899, 1131
Eco53kI	GAGCTC	1 cut(s)	2021
Eco57I	CTGAAG	2 cut(s)	1466, 2328
Eco88I	CYCGRG	1 cut(s)	170
EcoICRI	GAGCTC	1 cut(s)	2021
EcoO109I	RGGNCCY	1 cut(s)	1131
EcoRI	GAATTC	1 cut(s)	1778
EcoRII	CCWGG	4 cut(s)	517, 859, 1118, 1796
EcoT14I	CCWWGG	1 cut(s)	1134
EcoT22I	ATGCAT	2 cut(s)	919, 2188
EcoT38I	GRGCYC	1 cut(s)	2023
ErhI	CCWWGG	1 cut(s)	1134
FalI	AAGNNNNNCTT	2 cut(s)	81, 113
FaqI	GGGAC	3 cut(s)	761, 852, 1136
FblI	GTMKAC	2 cut(s)	1042, 1644
Fnu4HI	GCNGC	8 cut(s)	126, 559, 1076, 1278, 1281, 1830, 1896, 2004
FokI	GGATG	5 cut(s)	346, 407, 710, 1784, 2209
FriOI	GRGCYC	1 cut(s)	2023
Fsp4HI	GCNGC	8 cut(s)	126, 559, 1076, 1278, 1281, 1830, 1896, 2004
FspBI	CTAG	8 cut(s)	108, 578, 827, 1010, 1520, 1563, 1608, 2000
GlaI	GCGC	1 cut(s)	265
GluI	GCNGC	8 cut(s)	126, 559, 1076, 1278, 1281, 1830, 1896, 2004
GsaI	CCCAGC	2 cut(s)	1538, 2170
GsuI	CTGGAG	4 cut(s)	207, 507, 756, 2007
HaeII	RGCGCY	1 cut(s)	267
HaeIII	GGCC	7 cut(s)	561, 1189, 1277, 2006, 2103, 2159, 2296
HapII	CCGG	3 cut(s)	171, 414, 1508
HhaI	GCGC	1 cut(s)	266
Hin6I	GCGC	1 cut(s)	264
HinP1I	GCGC	1 cut(s)	264
HincII	GTYRAC	1 cut(s)	525
HindII	GTYRAC	1 cut(s)	525
HindIII	AAGCTT	1 cut(s)	385
HpaII	CCGG	3 cut(s)	171, 414, 1508
HphI	GGTGA	5 cut(s)	215, 299, 403, 783, 1112
Hpy188I	TCNGA	8 cut(s)	75, 510, 597, 1374, 1939, 2055, 2281, 2308
HpyAV	CCTTC	6 cut(s)	1369, 1434, 1490, 1526, 1913, 2217
HpyCH4III	ACNGT	3 cut(s)	1396, 1697, 1943
HpyCH4IV	ACGT	1 cut(s)	1036
HpyF10VI	GCNNNNNNNGC	6 cut(s)	443, 767, 1396, 1826, 1835, 2127
HpyF3I	CTNAG	7 cut(s)	51, 329, 532, 662, 719, 951, 1840
HpySE526I	ACGT	1 cut(s)	1036
HspAI	GCGC	1 cut(s)	264
Kpn2I	TCCGGA	1 cut(s)	1507
Kzo9I	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
LmnI	GCTCC	9 cut(s)	25, 101, 775, 1957, 1976, 2018, 2026, 2127, 2137
Lsp1109I	GCAGC	4 cut(s)	112, 1292, 1816, 1882
LweI	GCATC	8 cut(s)	429, 732, 904, 926, 1087, 1747, 2173, 2258
MaeI	CTAG	8 cut(s)	108, 578, 827, 1010, 1520, 1563, 1608, 2000
MaeII	ACGT	1 cut(s)	1036
MaeIII	GTNAC	3 cut(s)	545, 1100, 1691
MalI	GATC	8 cut(s)	16, 44, 77, 327, 654, 1525, 2205, 2362
MbiI	CCGCTC	1 cut(s)	558
MboI	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
MfeI	CAATTG	1 cut(s)	975
MflI	RGATCY	4 cut(s)	14, 42, 325, 652
MhlI	GDGCHC	6 cut(s)	30, 453, 1312, 1401, 1555, 2023
MlyI	GAGTC	3 cut(s)	817, 2042, 2366
MmeI	TCCRAC	4 cut(s)	946, 1382, 2067, 2259
Mph1103I	ATGCAT	2 cut(s)	919, 2188
MroI	TCCGGA	1 cut(s)	1507
MroXI	GAANNNNTTC	3 cut(s)	304, 752, 2313
MseI	TTAA	5 cut(s)	132, 258, 468, 482, 2096
MslI	CAYNNNNRTG	3 cut(s)	458, 1671, 1770
MspA1I	CMGCKG	1 cut(s)	625
MspI	CCGG	3 cut(s)	171, 414, 1508
MspR9I	CCNGG	6 cut(s)	171, 172, 519, 861, 1120, 1798
MunI	CAATTG	1 cut(s)	975
Mva1269I	GAATGC	2 cut(s)	513, 1807
MvaI	CCWGG	4 cut(s)	519, 861, 1120, 1798
MwoI	GCNNNNNNNGC	6 cut(s)	443, 767, 1396, 1826, 1835, 2127
NciI	CCSGG	2 cut(s)	171, 172
NdeII	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
NheI	GCTAGC	2 cut(s)	826, 1999
NlaIV	GGNNCC	8 cut(s)	634, 700, 840, 1132, 1953, 1972, 2129, 2283
NmeAIII	GCCGAG	1 cut(s)	2156
NmuCI	GTSAC	1 cut(s)	1100
NsiI	ATGCAT	2 cut(s)	919, 2188
NspI	RCATGY	4 cut(s)	146, 1534, 1670, 1934
PaeI	GCATGC	2 cut(s)	1534, 1670
PasI	CCCWGGG	1 cut(s)	1119
PcsI	WCGNNNNNNNCGW	1 cut(s)	1042
PctI	GAATGC	2 cut(s)	513, 1807
PdmI	GAANNNNTTC	3 cut(s)	304, 752, 2313
PfeI	GAWTC	7 cut(s)	233, 428, 500, 748, 1006, 1015, 1659
PflMI	CCANNNNNTGG	2 cut(s)	848, 881
PkrI	GCNGC	8 cut(s)	127, 560, 1077, 1279, 1282, 1831, 1897, 2005
PleI	GAGTC	3 cut(s)	816, 2041, 2366
PpsI	GAGTC	3 cut(s)	816, 2041, 2366
PpuMI	RGGWCCY	1 cut(s)	1131
Psp124BI	GAGCTC	1 cut(s)	2023
Psp5II	RGGWCCY	1 cut(s)	1131
Psp6I	CCWGG	4 cut(s)	517, 859, 1118, 1796
PspFI	CCCAGC	2 cut(s)	1534, 2166
PspGI	CCWGG	4 cut(s)	517, 859, 1118, 1796
PspN4I	GGNNCC	8 cut(s)	634, 700, 840, 1132, 1953, 1972, 2129, 2283
PspPI	GGNCC	6 cut(s)	698, 839, 899, 1131, 1188, 2157
PspPPI	RGGWCCY	1 cut(s)	1131
PsuI	RGATCY	4 cut(s)	14, 42, 325, 652
PvuII	CAGCTG	1 cut(s)	625
RsaI	GTAC	3 cut(s)	1266, 1447, 1878
RsaNI	GTAC	3 cut(s)	1265, 1446, 1877
RseI	CAYNNNNRTG	3 cut(s)	458, 1671, 1770
SacI	GAGCTC	1 cut(s)	2023
SaqAI	TTAA	5 cut(s)	132, 258, 468, 482, 2096
SatI	GCNGC	8 cut(s)	126, 559, 1076, 1278, 1281, 1830, 1896, 2004
Sau3AI	GATC	8 cut(s)	14, 42, 75, 325, 652, 1523, 2203, 2360
Sau96I	GGNCC	6 cut(s)	698, 839, 899, 1131, 1188, 2157
SchI	GAGTC	3 cut(s)	817, 2042, 2366
ScrFI	CCNGG	6 cut(s)	171, 172, 519, 861, 1120, 1798
SduI	GDGCHC	6 cut(s)	30, 453, 1312, 1401, 1555, 2023
SfaNI	GCATC	8 cut(s)	429, 732, 904, 926, 1087, 1747, 2173, 2258
SfcI	CTRYAG	2 cut(s)	432, 1546
SinI	GGWCC	4 cut(s)	698, 839, 899, 1131
SmaI	CCCGGG	1 cut(s)	172
SmiMI	CAYNNNNRTG	3 cut(s)	458, 1671, 1770
SmlI	CTYRAG	1 cut(s)	87
SmoI	CTYRAG	1 cut(s)	87
SpeI	ACTAGT	1 cut(s)	107
SphI	GCATGC	2 cut(s)	1534, 1670
SsiI	CCGC	7 cut(s)	558, 812, 824, 1075, 1278, 1566, 2003
SspI	AATATT	1 cut(s)	243
SspMI	CTAG	8 cut(s)	108, 578, 827, 1010, 1520, 1563, 1608, 2000
SstI	GAGCTC	1 cut(s)	2023
StyD4I	CCNGG	6 cut(s)	169, 170, 517, 859, 1118, 1796
StyI	CCWWGG	1 cut(s)	1134
TaaI	ACNGT	3 cut(s)	1396, 1697, 1943
TaiI	ACGT	1 cut(s)	1039
TaqI	TCGA	6 cut(s)	639, 806, 1680, 2192, 2202, 2266
TatI	WGTACW	1 cut(s)	1876
TauI	GCSGC	4 cut(s)	561, 1078, 1280, 2006
TfiI	GAWTC	7 cut(s)	233, 428, 500, 748, 1006, 1015, 1659
Tru1I	TTAA	5 cut(s)	132, 258, 468, 482, 2096
Tru9I	TTAA	5 cut(s)	132, 258, 468, 482, 2096
TscAI	CASTG	4 cut(s)	66, 1368, 1755, 2362
TseFI	GTSAC	1 cut(s)	1100
TseI	GCWGC	4 cut(s)	125, 1280, 1829, 1895
Tsp45I	GTSAC	1 cut(s)	1100
TspDTI	ATGAA	3 cut(s)	1015, 1869, 1953
TspGWI	ACGGA	2 cut(s)	1915, 1963
TspMI	CCCGGG	1 cut(s)	170
TspRI	CASTG	4 cut(s)	66, 1368, 1755, 2362
Van91I	CCANNNNNTGG	2 cut(s)	848, 881
VneI	GTGCAC	1 cut(s)	1308
VpaK11BI	GGWCC	4 cut(s)	698, 839, 899, 1131
XapI	RAATTY	8 cut(s)	730, 922, 941, 1065, 1778, 1885, 2027, 2040
XceI	RCATGY	4 cut(s)	146, 1534, 1670, 1934
XmaI	CCCGGG	1 cut(s)	170
XmiI	GTMKAC	2 cut(s)	1042, 1644
XmnI	GAANNNNTTC	3 cut(s)	304, 752, 2313
XspI	CTAG	8 cut(s)	108, 578, 827, 1010, 1520, 1563, 1608, 2000
Zsp2I	ATGCAT	2 cut(s)	919, 2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.