Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Reverse (-)

73729830 .. 73734810

Gene Structure 4981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G046500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGGGACGAGAAGATCTGAATTGGAGTACAAGGAGCTGAAGATCTGCGAACAGGTTTTGATTGCGTTTGTATTGATTTGCTTGGTGCAAGTTTCGCTTGCAGCTACTAATATGCAAGATGTTGCGGCGATTAACAGCTTACATGCTGCACTCGGCACGCCCGTTCTTCCTGGGTGGACTTCTGCTGGGGGAGACCCTTGTGGGGAAGCATGGCAAGGGGTTCAGTGCAATGACAGCACAATTATATCAATAACTCTTAATGCTGCCAATTTGGGAGGAGAATTGGGTGAGCACTTAGGATCGTTCACTTCAATGAGAACAATAGATCTGAGCAACAATCATATTGGTGGAAGTATACCTTCCATTTTACCTGTAACCATGCGAACCTTTTTTCTTTCAGCTAATCAATTGACCGGAAGTGTCCCCATTTCTTTGGCTTCATTGGTTGAGCTCACAGATATGTCTCTTAACAATAATCTCTTAACTGGTGAAATACCAGATGTGTTTGAAAGCCTTACAGCATTGATCAATTTAGATTTGTCTGGTAACAATTTGAGTGGGCACCTGCCACCGTCTCTAGAAAACGCTAAAGCTTTGACCAGTCTACATTTGCAGAACAATCAGCTATCTGGAACACTTGACGTGTTACAGGATCTTCCCTTGACCGATCTGAATATAGAGAATAACCTATTTGCTGGAACCATTCCTCCAAAGTTGCTGAACATCCCAAATTTTAGAAGTGATGGAAATCCATTAAATTCGTCTATTGCTCCAGTCCCTCCACCCACATCTCCGTTGGCTCCGTCAGCTCCTTCAACTACACCACCATCTCCTTATGCCTTTTGGGGACCACCTTCTGGAAAAACACCACCTGGTAAAACACCACCTGGAACACCACCCGCATCTGCACAAGAGAAATCAAATTCTGGAAAAGCAAATAGCTTTTTTACTACTAAAAGGGTAGTTGGGATATCAATTGGAGGGGTGTTTGTACTTATTATTTTGGTACTAGTAGTTTTGTTTCTTATGCCAAGAGCTACTAGACGAAGAGGAGAGACTGACGACAGAATTTCCAAGCCGCATCAAATAGGAGCTTATCGCGACAGGGAGAATCCACCCATGGACATTGGGTCCTTGGTTCAACCAAACAATCAATTACAGAAAGTTCCGAAAGAGGAAGTTATGAGGCCCAAAGAGGATAATGAAACAGAACCCCGAAGACCATGGGCAATGCCAAAGTCAAATGATGAGCAAGATAGAATTGTCCAAAGAATGAGTGCAGTACCCAAACAACGAGATGGTCATACGGTCATTGTAAAGCCAATTGTACCAACTGAAGTAAAGACAGTGAAGCCTTCCACGAGAAGTCTAAACCCCACAATTTCTGCCAAGTCTTTCTCCATTGCTTCACTTCAGCAATATACAAACAGCTTTTCTCAGGATAATCTTATAGGAGCGGGCATGCTGGGAAGTGTCTATAGGGCACAGCTTCCTGATGGAAAGCTCCTTGCAGTCAAGAAATTGGACAAGAGAGCTTCCAATCAGCAGAAGGATGAGGAGTTTCTTGAACTGGTAAACAACATTGATAGAATCCGGCATGCTAATGTTGTAGAGCTCATAGGTTACTGTGCAGAGCATGGTCAAAGGCTTCTTATCTACGAGTATTGCAGTAATGGTTCACTGCATGATTGTCTGCACTCGGAGGATGAATTTATGAAGAAACTATCGTGGAATACTCGCATAAGAATGGCACTTGGAGCTGCAAGAGCTTTGGAGTATTTACATGAGGTTTGTCAGCCACGTATTGTACACAGGAATTTCAAGTCTAACAACCTTCTCCTTGATGATGACCTTTCTATCCATGTTTCTGAGTGTGGCTTGGCTTCCTTAATATCATCTGGCTCCGTAAGTCAGTTGTCAGGGCATCTGCTATCAGCTTATGGTTACGGAGCTCCAGAATTTGATTCAGGAATTTATACTCATCAGAGTGATGTTTACAGCTTTGGTGTAGTGATGTTAGAACTATTAACAGGCCGAAAATCCCATGACAGGACACGGACTCGAGCGGAACAATTCCTGGTTAGATGGGCCATTCCCCAGCTTCATGACATTGATGCATTATCAAGGATGGTCGATCCCTCTCTAAACAGAGAATATCCTACAAAATCCTTATCACACTTTGCTGACATTATATCTCGATGCGTTCAGTCGGAGCCAGAGTTCAGGCCGCCAATGTCTGAAGTTGTTCAGGACCTATTAGACATGATCCGAAGAGAGCCTCGCGGCAGCGGATCAAGTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

768

Amino Acids

84.11

Weight (kDa)

6.05

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	151 - 209	4.8e-06	Leucine rich repeat
Pkinase	PF00069	479 - 751	1.7e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	481 - 752	3.4e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	573
Acc36I	ACCTGC	1 cut(s)	573
AccB1I	GGYRCC	1 cut(s)	561
AccB7I	CCANNNNNTGG	1 cut(s)	857
AccBSI	CCGCTC	2 cut(s)	1457, 2066
AccI	GTMKAC	2 cut(s)	355, 604
AccII	CGCG	2 cut(s)	1101, 2283
AciI	CCGC	8 cut(s)	125, 900, 1079, 1457, 2066, 2228, 2283, 2289
AclWI	GGATC	5 cut(s)	307, 660, 2129, 2260, 2299
AcsI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1709, 1816, 1958, 1971
AcuI	CTGAAG	4 cut(s)	59, 1356, 1397, 2259
AfaI	GTAC	6 cut(s)	29, 993, 1008, 1284, 1329, 1809
AfiI	CCNNNNNNNGG	3 cut(s)	202, 857, 2049
AflIII	ACRYGT	1 cut(s)	642
AgsI	TTSAA	6 cut(s)	312, 509, 816, 1142, 1568, 1822
AhdI	GACNNNNNGTC	1 cut(s)	1129
AhlI	ACTAGT	1 cut(s)	1009
AjiI	CACGTC	1 cut(s)	643
AjnI	CCWGG	4 cut(s)	169, 871, 886, 2076
AloI	GAACNNNNNNTCC	4 cut(s)	691, 723, 2204, 2236
Alw21I	GWGCWC	4 cut(s)	294, 453, 1617, 1954
Alw26I	GTCTC	4 cut(s)	186, 468, 579, 1049
AlwI	GGATC	5 cut(s)	307, 660, 2129, 2260, 2299
Ama87I	CYCGRG	1 cut(s)	2061
AoxI	GGCC	4 cut(s)	1187, 2032, 2088, 2225
ApeKI	GCWGC	5 cut(s)	101, 146, 263, 1760, 2286
ApoI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1709, 1816, 1958, 1971
Asp700I	GAANNNNTTC	1 cut(s)	2244
AspS9I	GGNCC	5 cut(s)	848, 1131, 1188, 2088, 2251
AsuHPI	GGTGA	2 cut(s)	299, 500
AvaI	CYCGRG	1 cut(s)	2061
AvaII	GGWCC	3 cut(s)	848, 1131, 2251
BaeGI	GKGCMC	2 cut(s)	564, 1486
BanI	GGYRCC	1 cut(s)	561
BanII	GRGCYC	3 cut(s)	453, 1617, 1954
BauI	CACGAG	1 cut(s)	1360
BbsI	GAAGAC	1 cut(s)	1225
Bbv12I	GWGCWC	4 cut(s)	294, 453, 1617, 1954
BbvI	GCAGC	5 cut(s)	113, 133, 250, 1747, 2298
BccI	CCATC	6 cut(s)	737, 835, 1292, 1490, 2079, 2122
BciT130I	CCWGG	4 cut(s)	171, 873, 888, 2078
BclI	TGATCA	1 cut(s)	525
BcoDI	GTCTC	4 cut(s)	186, 468, 579, 1049
BcuI	ACTAGT	1 cut(s)	1009
BfaI	CTAG	3 cut(s)	578, 1010, 1041
BfmI	CTRYAG	1 cut(s)	1477
BfuAI	ACCTGC	1 cut(s)	573
BglII	AGATCT	3 cut(s)	14, 42, 325
BisI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1761, 2228, 2284, 2287
BlsI	GCNGC	9 cut(s)	103, 127, 148, 265, 1080, 1762, 2229, 2285, 2288
Bme1390I	CCNGG	4 cut(s)	171, 873, 888, 2078
Bme18I	GGWCC	3 cut(s)	848, 1131, 2251
BmeRI	GACNNNNNGTC	1 cut(s)	1129
BmeT110I	CYCGRG	1 cut(s)	2061
BmgBI	CACGTC	1 cut(s)	643
BmgT120I	GGNCC	5 cut(s)	848, 1131, 1188, 2088, 2251
BmiI	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1903, 2214
BmrFI	CCNGG	4 cut(s)	171, 873, 888, 2078
BmsI	GCATC	5 cut(s)	911, 1090, 1933, 2104, 2189
BpiI	GAAGAC	1 cut(s)	1225
BpmI	CTGGAG	2 cut(s)	756, 1938
BsaAI	YACGTR	1 cut(s)	1802
BsaBI	GATNNNNATC	1 cut(s)	747
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BsaWI	WCCGGW	1 cut(s)	413
BsaXI	ACNNNNNCTCC	4 cut(s)	691, 721, 2204, 2234
Bsc4I	CCNNNNNNNGG	3 cut(s)	202, 857, 2049
Bse1I	ACTGG	4 cut(s)	490, 600, 773, 1575
Bse3DI	GCAATG	3 cut(s)	235, 1236, 1401
Bse8I	GATNNNNATC	1 cut(s)	747
BseBI	CCWGG	4 cut(s)	171, 873, 888, 2078
BseDI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BseGI	GGATG	4 cut(s)	723, 1558, 1711, 2133
BseJI	GATNNNNATC	1 cut(s)	747
BseLI	CCNNNNNNNGG	3 cut(s)	202, 857, 2049
BseMI	GCAATG	3 cut(s)	235, 1236, 1401
BseMII	CTCAG	3 cut(s)	320, 1451, 1860
BseNI	ACTGG	4 cut(s)	490, 600, 773, 1575
BseRI	GAGGAG	3 cut(s)	291, 1065, 1571
BseSI	GKGCMC	2 cut(s)	564, 1486
BseXI	GCAGC	5 cut(s)	113, 133, 250, 1747, 2298
BseYI	CCCAGC	3 cut(s)	185, 1465, 2097
BsgI	GTGCAG	5 cut(s)	132, 891, 1299, 1650, 1679
Bsh1236I	CGCG	2 cut(s)	1101, 2283
BshFI	GGCC	4 cut(s)	1189, 2034, 2090, 2227
BshNI	GGYRCC	1 cut(s)	561
BsiHKAI	GWGCWC	4 cut(s)	294, 453, 1617, 1954
BsiHKCI	CYCGRG	1 cut(s)	2061
BsiSI	CCGG	2 cut(s)	414, 1594
BslFI	GGGAC	4 cut(s)	19, 407, 761, 861
BslI	CCNNNNNNNGG	3 cut(s)	202, 857, 2049
BsmAI	GTCTC	4 cut(s)	186, 468, 579, 1049
BsmBI	CGTCTC	1 cut(s)	579
BsmFI	GGGAC	4 cut(s)	19, 407, 761, 861
BsnI	GGCC	4 cut(s)	1189, 2034, 2090, 2227
Bso31I	GGTCTC	1 cut(s)	186
BsoBI	CYCGRG	1 cut(s)	2061
Bsp1286I	GDGCHC	6 cut(s)	294, 453, 564, 1486, 1617, 1954
Bsp1407I	TGTACA	1 cut(s)	1807
Bsp19I	CCATGG	2 cut(s)	1119, 1223
Bsp68I	TCGCGA	1 cut(s)	1101
BspACI	CCGC	8 cut(s)	125, 900, 1079, 1457, 2066, 2228, 2283, 2289
BspANI	GGCC	4 cut(s)	1189, 2034, 2090, 2227
BspCNI	CTCAG	3 cut(s)	321, 1450, 1861
BspFNI	CGCG	2 cut(s)	1101, 2283
BspHI	TCATGA	1 cut(s)	2104
BspLI	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1903, 2214
BspMI	ACCTGC	1 cut(s)	573
BspPI	GGATC	5 cut(s)	307, 660, 2129, 2260, 2299
BspT107I	GGYRCC	1 cut(s)	561
BspTNI	GGTCTC	1 cut(s)	186
BsrBI	CCGCTC	2 cut(s)	1457, 2066
BsrDI	GCAATG	3 cut(s)	235, 1236, 1401
BsrGI	TGTACA	1 cut(s)	1807
BsrI	ACTGG	4 cut(s)	490, 600, 773, 1575
BssECI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BssNAI	GTATAC	1 cut(s)	356
BssSI	CACGAG	1 cut(s)	1360
BssT1I	CCWWGG	3 cut(s)	1119, 1134, 1223
Bst1107I	GTATAC	1 cut(s)	356
Bst2BI	CACGAG	1 cut(s)	1360
Bst2UI	CCWGG	4 cut(s)	171, 873, 888, 2078
Bst4CI	ACNGT	4 cut(s)	573, 1309, 1348, 1628
Bst6I	CTCTTC	2 cut(s)	1042, 2266
BstAUI	TGTACA	1 cut(s)	1807
BstBAI	YACGTR	1 cut(s)	1802
BstC8I	GCNNGC	5 cut(s)	99, 158, 1459, 1463, 1599
BstDEI	CTNAG	4 cut(s)	295, 329, 1437, 1869
BstDSI	CCRYGG	2 cut(s)	1119, 1223
BstF5I	GGATG	4 cut(s)	723, 1558, 1711, 2133
BstFNI	CGCG	2 cut(s)	1101, 2283
BstMAI	GTCTC	4 cut(s)	186, 468, 579, 1049
BstMWI	GCNNNNNNNGC	5 cut(s)	94, 234, 806, 1757, 1766
BstNI	CCWGG	4 cut(s)	171, 873, 888, 2078
BstNSI	RCATGY	3 cut(s)	146, 1465, 1601
BstSCI	CCNGG	4 cut(s)	169, 871, 886, 2076
BstSFI	CTRYAG	1 cut(s)	1477
BstSLI	GKGCMC	2 cut(s)	564, 1486
BstUI	CGCG	2 cut(s)	1101, 2283
BstV1I	GCAGC	5 cut(s)	113, 133, 250, 1747, 2298
BstV2I	GAAGAC	1 cut(s)	1225
BstX2I	RGATCY	4 cut(s)	14, 42, 325, 652
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	4 cut(s)	14, 42, 325, 652
BstZ17I	GTATAC	1 cut(s)	356
BsuRI	GGCC	4 cut(s)	1189, 2034, 2090, 2227
BtgI	CCRYGG	2 cut(s)	1119, 1223
BtrI	CACGTC	1 cut(s)	643
BtsCI	GGATG	4 cut(s)	723, 1558, 1711, 2133
BtsI	GCAGTG	1 cut(s)	1679
BtsIMutI	CAGTG	3 cut(s)	230, 1353, 1679
BtuMI	TCGCGA	1 cut(s)	1101
BveI	ACCTGC	1 cut(s)	573
Cac8I	GCNNGC	5 cut(s)	99, 158, 1459, 1463, 1599
CciI	TCATGA	1 cut(s)	2104
Cfr13I	GGNCC	5 cut(s)	848, 1131, 1188, 2088, 2251
CsiI	ACCWGGT	1 cut(s)	871
Csp6I	GTAC	6 cut(s)	28, 992, 1007, 1283, 1328, 1808
CspCI	CAANNNNNGTGG	2 cut(s)	538, 573
CviQI	GTAC	6 cut(s)	28, 992, 1007, 1283, 1328, 1808
DdeI	CTNAG	4 cut(s)	295, 329, 1437, 1869
DriI	GACNNNNNGTC	1 cut(s)	1129
Eam1104I	CTCTTC	2 cut(s)	1042, 2266
Eam1105I	GACNNNNNGTC	1 cut(s)	1129
EarI	CTCTTC	2 cut(s)	1042, 2266
Ecl136II	GAGCTC	3 cut(s)	451, 1615, 1952
Eco130I	CCWWGG	3 cut(s)	1119, 1134, 1223
Eco24I	GRGCYC	3 cut(s)	453, 1617, 1954
Eco31I	GGTCTC	1 cut(s)	186
Eco32I	GATATC	1 cut(s)	972
Eco47I	GGWCC	3 cut(s)	848, 1131, 2251
Eco53kI	GAGCTC	3 cut(s)	451, 1615, 1952
Eco57I	CTGAAG	4 cut(s)	59, 1356, 1397, 2259
Eco88I	CYCGRG	1 cut(s)	2061
EcoICRI	GAGCTC	3 cut(s)	451, 1615, 1952
EcoO109I	RGGNCCY	2 cut(s)	1131, 2251
EcoRII	CCWGG	4 cut(s)	169, 871, 886, 2076
EcoRV	GATATC	1 cut(s)	972
EcoT14I	CCWWGG	3 cut(s)	1119, 1134, 1223
EcoT22I	ATGCAT	1 cut(s)	2119
EcoT38I	GRGCYC	3 cut(s)	453, 1617, 1954
ErhI	CCWWGG	3 cut(s)	1119, 1134, 1223
Esp3I	CGTCTC	1 cut(s)	579
FalI	AAGNNNNNCTT	4 cut(s)	81, 113, 343, 375
FaqI	GGGAC	4 cut(s)	19, 407, 761, 861
FauI	CCCGC	2 cut(s)	907, 1450
FbaI	TGATCA	1 cut(s)	525
FblI	GTMKAC	2 cut(s)	355, 604
Fnu4HI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1761, 2228, 2284, 2287
FokI	GGATG	4 cut(s)	710, 1565, 1718, 2140
FriOI	GRGCYC	3 cut(s)	453, 1617, 1954
Fsp4HI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1761, 2228, 2284, 2287
FspBI	CTAG	3 cut(s)	578, 1010, 1041
GluI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1761, 2228, 2284, 2287
GsaI	CCCAGC	3 cut(s)	189, 1469, 2101
GsuI	CTGGAG	2 cut(s)	756, 1938
HaeIII	GGCC	4 cut(s)	1189, 2034, 2090, 2227
HapII	CCGG	2 cut(s)	414, 1594
HindIII	AAGCTT	1 cut(s)	591
HinfI	GANTC	4 cut(s)	1111, 1590, 1964, 2059
HpaII	CCGG	2 cut(s)	414, 1594
HphI	GGTGA	2 cut(s)	299, 500
Hpy166II	GTNNAC	8 cut(s)	177, 306, 356, 605, 1576, 1679, 1810, 1996
Hpy8I	GTNNAC	8 cut(s)	177, 306, 356, 605, 1576, 1679, 1810, 1996
HpyAV	CCTTC	6 cut(s)	369, 822, 864, 1365, 1543, 1844
HpyCH4III	ACNGT	4 cut(s)	573, 1309, 1348, 1628
HpyCH4IV	ACGT	2 cut(s)	642, 1801
HpyF10VI	GCNNNNNNNGC	5 cut(s)	94, 234, 806, 1757, 1766
HpyF3I	CTNAG	4 cut(s)	295, 329, 1437, 1869
HpySE526I	ACGT	2 cut(s)	642, 1801
Ksp22I	TGATCA	1 cut(s)	525
Lsp1109I	GCAGC	5 cut(s)	113, 133, 250, 1747, 2298
LweI	GCATC	5 cut(s)	911, 1090, 1933, 2104, 2189
MabI	ACCWGGT	1 cut(s)	871
MaeI	CTAG	3 cut(s)	578, 1010, 1041
MaeII	ACGT	2 cut(s)	642, 1801
MaeIII	GTNAC	5 cut(s)	373, 545, 645, 1622, 1943
MbiI	CCGCTC	2 cut(s)	1457, 2066
MboII	GAAGA	8 cut(s)	24, 52, 158, 647, 1059, 1230, 1729, 2283
MfeI	CAATTG	3 cut(s)	407, 975, 1323
MflI	RGATCY	4 cut(s)	14, 42, 325, 652
MhlI	GDGCHC	6 cut(s)	294, 453, 564, 1486, 1617, 1954
MlyI	GAGTC	1 cut(s)	2053
MmeI	TCCRAC	1 cut(s)	2190
Mph1103I	ATGCAT	1 cut(s)	2119
MroXI	GAANNNNTTC	1 cut(s)	2244
MseI	TTAA	7 cut(s)	132, 258, 468, 482, 755, 1889, 2027
MslI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1602, 1745, 1986
MspA1I	CMGCKG	1 cut(s)	2289
MspI	CCGG	2 cut(s)	414, 1594
MspR9I	CCNGG	4 cut(s)	171, 873, 888, 2078
MunI	CAATTG	3 cut(s)	407, 975, 1323
MvaI	CCWGG	4 cut(s)	171, 873, 888, 2078
MvnI	CGCG	2 cut(s)	1101, 2283
MwoI	GCNNNNNNNGC	5 cut(s)	94, 234, 806, 1757, 1766
NcoI	CCATGG	2 cut(s)	1119, 1223
NlaIV	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1903, 2214
NmeAIII	GCCGAG	1 cut(s)	132
NruI	TCGCGA	1 cut(s)	1101
NsiI	ATGCAT	1 cut(s)	2119
NspI	RCATGY	3 cut(s)	146, 1465, 1601
PaeI	GCATGC	2 cut(s)	1465, 1601
PaeR7I	CTCGAG	1 cut(s)	2061
PagI	TCATGA	1 cut(s)	2104
PaqCI	CACCTGC	1 cut(s)	573
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PdmI	GAANNNNTTC	1 cut(s)	2244
PfeI	GAWTC	3 cut(s)	1111, 1590, 1964
PflMI	CCANNNNNTGG	1 cut(s)	857
PkrI	GCNGC	9 cut(s)	103, 127, 148, 265, 1080, 1762, 2229, 2285, 2288
PleI	GAGTC	1 cut(s)	2053
PpsI	GAGTC	1 cut(s)	2053
Ppu21I	YACGTR	1 cut(s)	1802
PpuMI	RGGWCCY	2 cut(s)	1131, 2251
Psp124BI	GAGCTC	3 cut(s)	453, 1617, 1954
Psp5II	RGGWCCY	2 cut(s)	1131, 2251
Psp6I	CCWGG	4 cut(s)	169, 871, 886, 2076
PspFI	CCCAGC	3 cut(s)	185, 1465, 2097
PspGI	CCWGG	4 cut(s)	169, 871, 886, 2076
PspN4I	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1903, 2214
PspPI	GGNCC	5 cut(s)	848, 1131, 1188, 2088, 2251
PspPPI	RGGWCCY	2 cut(s)	1131, 2251
PspXI	VCTCGAGB	1 cut(s)	2061
PsuI	RGATCY	4 cut(s)	14, 42, 325, 652
RruI	TCGCGA	1 cut(s)	1101
RsaI	GTAC	6 cut(s)	29, 993, 1008, 1284, 1329, 1809
RsaNI	GTAC	6 cut(s)	28, 992, 1007, 1283, 1328, 1808
RseI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1602, 1745, 1986
SacI	GAGCTC	3 cut(s)	453, 1617, 1954
SaqAI	TTAA	7 cut(s)	132, 258, 468, 482, 755, 1889, 2027
SatI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1761, 2228, 2284, 2287
Sau96I	GGNCC	5 cut(s)	848, 1131, 1188, 2088, 2251
SchI	GAGTC	1 cut(s)	2053
ScrFI	CCNGG	4 cut(s)	171, 873, 888, 2078
SduI	GDGCHC	6 cut(s)	294, 453, 564, 1486, 1617, 1954
SexAI	ACCWGGT	1 cut(s)	871
SfaNI	GCATC	5 cut(s)	911, 1090, 1933, 2104, 2189
SfcI	CTRYAG	1 cut(s)	1477
Sfr274I	CTCGAG	1 cut(s)	2061
SinI	GGWCC	3 cut(s)	848, 1131, 2251
SlaI	CTCGAG	1 cut(s)	2061
SmiMI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1602, 1745, 1986
SmlI	CTYRAG	1 cut(s)	2061
SmoI	CTYRAG	1 cut(s)	2061
SpeI	ACTAGT	1 cut(s)	1009
SphI	GCATGC	2 cut(s)	1465, 1601
SsiI	CCGC	8 cut(s)	125, 900, 1079, 1457, 2066, 2228, 2283, 2289
SspMI	CTAG	3 cut(s)	578, 1010, 1041
SstI	GAGCTC	3 cut(s)	453, 1617, 1954
StyD4I	CCNGG	4 cut(s)	169, 871, 886, 2076
StyI	CCWWGG	3 cut(s)	1119, 1134, 1223
TaaI	ACNGT	4 cut(s)	573, 1309, 1348, 1628
TaiI	ACGT	2 cut(s)	645, 1804
TaqI	TCGA	3 cut(s)	2062, 2133, 2197
TaqII	GACCGA	1 cut(s)	680
TatI	WGTACW	3 cut(s)	27, 991, 1807
TauI	GCSGC	4 cut(s)	128, 1081, 2230, 2286
TfiI	GAWTC	3 cut(s)	1111, 1590, 1964
Tru1I	TTAA	7 cut(s)	132, 258, 468, 482, 755, 1889, 2027
Tru9I	TTAA	7 cut(s)	132, 258, 468, 482, 755, 1889, 2027
TscAI	CASTG	3 cut(s)	230, 1353, 1686
TseI	GCWGC	5 cut(s)	101, 146, 263, 1760, 2286
TspDTI	ATGAA	5 cut(s)	429, 1218, 1722, 1730, 2093
TspGWI	ACGGA	5 cut(s)	783, 792, 1894, 1962, 2071
TspRI	CASTG	3 cut(s)	230, 1353, 1686
Van91I	CCANNNNNTGG	1 cut(s)	857
VpaK11BI	GGWCC	3 cut(s)	848, 1131, 2251
XapI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1709, 1816, 1958, 1971
XbaI	TCTAGA	1 cut(s)	577
XceI	RCATGY	3 cut(s)	146, 1465, 1601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	793
XhoI	CTCGAG	1 cut(s)	2061
XmiI	GTMKAC	2 cut(s)	355, 604
XmnI	GAANNNNTTC	1 cut(s)	2244
XspI	CTAG	3 cut(s)	578, 1010, 1041
Zsp2I	ATGCAT	1 cut(s)	2119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.