Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Reverse (-)

34545576 .. 34551663

Gene Structure 6088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g44950.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGAGATCAATGGGGAGGAGAAGATCTGAATTGGACTACAAGGAGCTGAAGATCTGTGAACATGTTCTGATTGGGTTTATATTGATTTGCTTGGCGCAAGTTTCGCTTGGAGCTACTAATCTGCAAGATGTTGCTGCAATCAACAGCTTACATGCTGCGCTCGGCACGCCTGTTCTTCCTGGGTGGACTTCTGCTGGAGGAGACCCTTGTGGGGAAGCATGGCAAGGGGTTCAGTGCAATGATAGCGCAATTGTATCAATAATTCTTAATGCTGCCAATCTGGGAGGTGAATTGGGTGAGAACTTGGGATCGTTCACTTCAATAAAAACAATAGATTTAAGCAACAATCATATTGGTGGAACTATACCTTCCGTTTTACCTGTTACCATGGTAACCTTTTTTCTTTCAGCTAATCAGTTCACTGGAAGTATCCCAGTTTCTTTGTCTTCATTGGATCAGCTCACAGATATGTCTCTTAACAATAATCTCTTAACCGGTGAAATACCAGATGCCTTTGAGAGACTTACTGCATTGATCAATTTAGATTTGTCCGTTAACAATATGAGCGGGGAACTGCCACCCTCTCTGAAAGACGCTAAAGCTTTGACCAGTCTACATTTGCAGCACAATCAGCTGTCTGGAACACTTGACGTGTTACAGGATCTTCCCTTGAGCGATCTGAATATAGAGTACAACCAATTTGCTGGACCCATTCCTCCAAAGTTGCTGAGCATCCCAAATTTTAGAAGTGACGGAAATCCATTAAATTCTTCTATTGCTCCAGTCCCTCCACCCACATCTCCATTGGCTCCATCACCTCCTTCAACTTCACCACCATCTCCTTATGCCTTTTGGGGACCACCTTCTGGGAGAACACCACCTAGTAAAGCACCACCTGGAACACCACCCACAACTGAACAAGAAAAATCAAATTCTGGAAAAGCAAAGAGCTTTTTTACCACTAAAAGGGTAGTTGGGATATCAGTTGGAGGGGTGTTTGTACTTATTATTTTGGTACTGGTAGTTTTGTTTCTTATGCCAAGAGGTACCAAACGAAGAGGAGCGTCTGACAGAATATCCAAGCCGCATCAAATAGGAGCTTATCGTGACAGGGAGAATCCACCCATGGATAATGAGTCCCGGGTTCAACCAAACAATCAATTACAGAAAGTTCCAGAAAAGGTAGATGTGAGGCCCAAAGAAGATACTGAAACAGAACCCAGAAGAACATGGGCAATGCCAAAGTCAAATGATGAGCAAGATAGAAATGTCCAAAGAATGAGTGCAGTACCCAAAAGACGAGATAGTCATGTGGTTGATATGAATCCACTTAATCCTTTTTTGATGCCTCCTCCCCCTCCTCCTCCACCACCCCCTCCTCCACCACCATTTCCTGTTGAGAGGGTCATTGTAAAGCCAATCGTGCCAACTGAAGTAAACACAGTGAAGCCTTCCACAAGAAACCTCACTATTTCTGCCAAGTCTTTCACCATTGCTTTACTTCAGCAATATACAAACAGCTTTTCTCAGGATAATCTTATTGGAGCAGGCATGCTGGGAAGTGTCTACAGGGCACAGCTTCCTGATGGAAAGCTACTTGCAGTCAAGAAATTGGACAAGAGAGCTTCTAATCACCAGAAGGATGAGGAGTTTCTTGAACTCGTAAACAACATTGATAGAATCCGGCATGCTAATGTTGTAGAGCTCATAGGATACTGTGCAGAGCATGGTCAAAGGCTTCTTATCTACGAGTACTGCAGTAATGGTTCACTGCATGATACTCTGCACTCGGACGATGAATTTAAAAAGAAACTCTCGTGGAATACTCGCATAAGAATGGCACTTGAGGCTGCAAGAGCTTTGGAGTATTTACATGAGGTCTGTCAGCCACCTATCGTACACAGGAATTTCAAGTCTAACAACCTTCTCCTTGATGATGACCTTTCTATCCGCGTCTCTGACTGTGGCTTGGCTTCCTTAATATCATCTGGCTCCGTAAGTCAGTTGTCAGGGCATTTGCTATCGGCCTATGGTTACGGAGCTCCAGAATTTGAGTCAGGGATTTATACTCATCAGAGTGATGTTTACAGCTTTGGTGTGGTGATGTTAGAACTATTAACAGGCCGAAAATCCCATGACAGGACACGGAATCGAGGAGAGCAATTCTTGGTTAGATGGGCCATTCCCCAGCTTCATGACATTGATGCATTGTCAAGGATGGTCGATCCCTCCCTAGACAGAGAGTATCCTACAAAATCCTTATCACACTTTGCTGACATCATATCTCGATGTGTTCAGTCGGAGCCAGAGTTCAGGCCACCAATGTCTGAAGTTGTTCAGGACCTATTAGACATGATACGAAGAGAGCCTCGCGGCAGCGGATCAAGTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

799

Amino Acids

87.67

Weight (kDa)

6.2

Isoelectric Point (pI)

44.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	509 - 781	4.5e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	511 - 782	5e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1305
Acc65I	GGTACC	1 cut(s)	1046
AccB1I	GGYRCC	1 cut(s)	1046
AccB7I	CCANNNNNTGG	1 cut(s)	866
AccBSI	CCGCTC	1 cut(s)	567
AccI	GTMKAC	2 cut(s)	613, 1566
AccII	CGCG	2 cut(s)	1953, 2373
AciI	CCGC	5 cut(s)	567, 1085, 1951, 2373, 2379
AclWI	GGATC	5 cut(s)	316, 462, 669, 2219, 2389
AcsI	RAATTY	6 cut(s)	739, 766, 931, 1799, 1906, 2048
AcuI	CTGAAG	4 cut(s)	68, 1452, 1487, 2349
AfaI	GTAC	7 cut(s)	692, 1002, 1017, 1048, 1290, 1754, 1899
AfiI	CCNNNNNNNGG	4 cut(s)	211, 866, 966, 2139
AflIII	ACRYGT	2 cut(s)	61, 651
AgeI	ACCGGT	1 cut(s)	494
AgsI	TTSAA	5 cut(s)	321, 825, 1148, 1658, 1912
AjiI	CACGTC	1 cut(s)	652
AjnI	CCWGG	2 cut(s)	178, 895
AloI	GAACNNNNNNTCC	2 cut(s)	2294, 2326
Alw21I	GWGCWC	2 cut(s)	1707, 2044
Alw26I	GTCTC	4 cut(s)	195, 477, 514, 1960
AlwI	GGATC	5 cut(s)	316, 462, 669, 2219, 2389
Ama87I	CYCGRG	1 cut(s)	1140
AoxI	GGCC	5 cut(s)	1193, 2025, 2122, 2178, 2315
ApeKI	GCWGC	6 cut(s)	134, 155, 272, 622, 1850, 2376
ApoI	RAATTY	6 cut(s)	739, 766, 931, 1799, 1906, 2048
AsiGI	ACCGGT	1 cut(s)	494
Asp700I	GAANNNNTTC	2 cut(s)	63, 2334
Asp718I	GGTACC	1 cut(s)	1046
AspLEI	GCGC	3 cut(s)	97, 160, 248
AspS9I	GGNCC	5 cut(s)	707, 857, 1194, 2178, 2341
AsuC2I	CCSGG	2 cut(s)	1141, 1142
AsuHPI	GGTGA	8 cut(s)	299, 308, 509, 807, 822, 1480, 1625, 2113
AvaI	CYCGRG	1 cut(s)	1140
AvaII	GGWCC	3 cut(s)	707, 857, 2341
BaeGI	GKGCMC	1 cut(s)	1576
BanI	GGYRCC	1 cut(s)	1046
BanII	GRGCYC	2 cut(s)	1707, 2044
BauI	CACGAG	1 cut(s)	1816
BbsI	GAAGAC	1 cut(s)	438
Bbv12I	GWGCWC	2 cut(s)	1707, 2044
BbvI	GCAGC	6 cut(s)	121, 142, 259, 634, 1837, 2388
BccI	CCATC	5 cut(s)	820, 844, 1580, 2169, 2212
BciT130I	CCWGG	2 cut(s)	180, 897
BciVI	GTATCC	3 cut(s)	440, 1706, 2256
BclI	TGATCA	1 cut(s)	534
BcnI	CCSGG	2 cut(s)	1141, 1142
BcoDI	GTCTC	4 cut(s)	195, 477, 514, 1960
BfaI	CTAG	2 cut(s)	882, 2234
BfmI	CTRYAG	2 cut(s)	1567, 1756
BfuI	GTATCC	3 cut(s)	440, 1706, 2256
BglII	AGATCT	2 cut(s)	23, 51
BisI	GCNGC	8 cut(s)	135, 156, 273, 623, 1085, 1851, 2374, 2377
BlpI	GCTNAGC	1 cut(s)	728
BlsI	GCNGC	8 cut(s)	136, 157, 274, 624, 1086, 1852, 2375, 2378
BmcAI	AGTACT	1 cut(s)	1754
Bme1390I	CCNGG	4 cut(s)	180, 897, 1141, 1142
Bme18I	GGWCC	3 cut(s)	707, 857, 2341
BmeT110I	CYCGRG	1 cut(s)	1140
BmgBI	CACGTC	1 cut(s)	652
BmgT120I	GGNCC	5 cut(s)	707, 857, 1194, 2178, 2341
BmiI	GGNNCC	6 cut(s)	709, 810, 858, 1048, 1993, 2304
BmrFI	CCNGG	4 cut(s)	180, 897, 1141, 1142
BmrI	ACTGGG	1 cut(s)	428
BmsI	GCATC	5 cut(s)	499, 741, 1096, 1335, 2194
BmuI	ACTGGG	1 cut(s)	428
BpiI	GAAGAC	1 cut(s)	438
BpmI	CTGGAG	3 cut(s)	216, 765, 2028
Bpu1102I	GCTNAGC	1 cut(s)	728
BpuEI	CTTGAG	2 cut(s)	691, 1865
BpuMI	CCSGG	2 cut(s)	1141, 1142
BsaBI	GATNNNNATC	1 cut(s)	1323
BsaI	GGTCTC	1 cut(s)	195
BsaJI	CCNNGG	4 cut(s)	179, 387, 1125, 1140
BsaWI	WCCGGW	1 cut(s)	494
BsaXI	ACNNNNNCTCC	2 cut(s)	2294, 2324
Bsc4I	CCNNNNNNNGG	4 cut(s)	211, 866, 966, 2139
Bse118I	RCCGGY	1 cut(s)	494
Bse1I	ACTGG	5 cut(s)	427, 434, 609, 782, 1023
Bse3DI	GCAATG	3 cut(s)	244, 1242, 1491
Bse8I	GATNNNNATC	1 cut(s)	1323
BseBI	CCWGG	2 cut(s)	180, 897
BseDI	CCNNGG	4 cut(s)	179, 387, 1125, 1140
BseGI	GGATG	3 cut(s)	732, 1648, 2223
BseJI	GATNNNNATC	1 cut(s)	1323
BseLI	CCNNNNNNNGG	4 cut(s)	211, 866, 966, 2139
BseMI	GCAATG	3 cut(s)	244, 1242, 1491
BseMII	CTCAG	2 cut(s)	719, 1541
BseNI	ACTGG	5 cut(s)	427, 434, 609, 782, 1023
BseRI	GAGGAG	9 cut(s)	31, 213, 1074, 1341, 1350, 1353, 1368, 1661, 2169
BseSI	GKGCMC	1 cut(s)	1576
BseXI	GCAGC	6 cut(s)	121, 142, 259, 634, 1837, 2388
BseYI	CCCAGC	2 cut(s)	1555, 2187
BsgI	GTGCAG	3 cut(s)	1305, 1740, 1769
Bsh1236I	CGCG	2 cut(s)	1953, 2373
BshFI	GGCC	5 cut(s)	1195, 2027, 2124, 2180, 2317
BshNI	GGYRCC	1 cut(s)	1046
BshTI	ACCGGT	1 cut(s)	494
BsiHKAI	GWGCWC	2 cut(s)	1707, 2044
BsiHKCI	CYCGRG	1 cut(s)	1140
BsiSI	CCGG	3 cut(s)	495, 1141, 1684
BslFI	GGGAC	3 cut(s)	770, 870, 1123
BslI	CCNNNNNNNGG	4 cut(s)	211, 866, 966, 2139
BsmAI	GTCTC	4 cut(s)	195, 477, 514, 1960
BsmBI	CGTCTC	1 cut(s)	1960
BsmFI	GGGAC	3 cut(s)	770, 870, 1123
BsnI	GGCC	5 cut(s)	1195, 2027, 2124, 2180, 2317
Bso31I	GGTCTC	1 cut(s)	195
BsoBI	CYCGRG	1 cut(s)	1140
Bsp1286I	GDGCHC	3 cut(s)	1576, 1707, 2044
Bsp1720I	GCTNAGC	1 cut(s)	728
Bsp19I	CCATGG	2 cut(s)	387, 1125
BspACI	CCGC	5 cut(s)	567, 1085, 1951, 2373, 2379
BspANI	GGCC	5 cut(s)	1195, 2027, 2124, 2180, 2317
BspCNI	CTCAG	2 cut(s)	720, 1540
BspFNI	CGCG	2 cut(s)	1953, 2373
BspHI	TCATGA	1 cut(s)	2194
BspLI	GGNNCC	6 cut(s)	709, 810, 858, 1048, 1993, 2304
BspMAI	CTGCAG	1 cut(s)	1760
BspPI	GGATC	5 cut(s)	316, 462, 669, 2219, 2389
BspT107I	GGYRCC	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	195
BsrBI	CCGCTC	1 cut(s)	567
BsrDI	GCAATG	3 cut(s)	244, 1242, 1491
BsrFI	RCCGGY	1 cut(s)	494
BsrI	ACTGG	5 cut(s)	427, 434, 609, 782, 1023
BssAI	RCCGGY	1 cut(s)	494
BssECI	CCNNGG	4 cut(s)	179, 387, 1125, 1140
BssSI	CACGAG	1 cut(s)	1816
BssT1I	CCWWGG	2 cut(s)	387, 1125
Bst2BI	CACGAG	1 cut(s)	1816
Bst2UI	CCWGG	2 cut(s)	180, 897
Bst4CI	ACNGT	3 cut(s)	1444, 1718, 1964
Bst6I	CTCTTC	2 cut(s)	1051, 2356
BstC8I	GCNNGC	4 cut(s)	167, 1549, 1553, 1689
BstDEI	CTNAG	2 cut(s)	728, 1527
BstDSI	CCRYGG	2 cut(s)	387, 1125
BstEII	GGTNACC	1 cut(s)	391
BstF5I	GGATG	3 cut(s)	732, 1648, 2223
BstFNI	CGCG	2 cut(s)	1953, 2373
BstHHI	GCGC	3 cut(s)	97, 160, 248
BstMAI	GTCTC	4 cut(s)	195, 477, 514, 1960
BstMWI	GCNNNNNNNGC	7 cut(s)	103, 166, 243, 631, 1423, 1847, 1856
BstNI	CCWGG	2 cut(s)	180, 897
BstNSI	RCATGY	4 cut(s)	65, 155, 1555, 1691
BstPI	GGTNACC	1 cut(s)	391
BstSCI	CCNGG	4 cut(s)	178, 895, 1139, 1140
BstSFI	CTRYAG	2 cut(s)	1567, 1756
BstSLI	GKGCMC	1 cut(s)	1576
BstUI	CGCG	2 cut(s)	1953, 2373
BstV1I	GCAGC	6 cut(s)	121, 142, 259, 634, 1837, 2388
BstV2I	GAAGAC	1 cut(s)	438
BstX2I	RGATCY	3 cut(s)	23, 51, 661
BstXI	CCANNNNNNTGG	1 cut(s)	704
BstYI	RGATCY	3 cut(s)	23, 51, 661
BsuI	GTATCC	3 cut(s)	440, 1706, 2256
BsuRI	GGCC	5 cut(s)	1195, 2027, 2124, 2180, 2317
BtgI	CCRYGG	2 cut(s)	387, 1125
BtrI	CACGTC	1 cut(s)	652
BtsCI	GGATG	3 cut(s)	732, 1648, 2223
BtsI	GCAGTG	1 cut(s)	1769
BtsIMutI	CAGTG	4 cut(s)	239, 420, 1449, 1769
Cac8I	GCNNGC	4 cut(s)	167, 1549, 1553, 1689
CciI	TCATGA	1 cut(s)	2194
CfoI	GCGC	3 cut(s)	97, 160, 248
Cfr10I	RCCGGY	1 cut(s)	494
Cfr13I	GGNCC	5 cut(s)	707, 857, 1194, 2178, 2341
Cfr9I	CCCGGG	1 cut(s)	1140
CseI	GACGC	3 cut(s)	602, 1053, 1942
Csp6I	GTAC	7 cut(s)	691, 1001, 1016, 1047, 1289, 1753, 1898
CspAI	ACCGGT	1 cut(s)	494
CviQI	GTAC	7 cut(s)	691, 1001, 1016, 1047, 1289, 1753, 1898
DdeI	CTNAG	2 cut(s)	728, 1527
DraI	TTTAAA	1 cut(s)	1804
DrdI	GACNNNNNNGTC	1 cut(s)	1305
DseDI	GACNNNNNNGTC	1 cut(s)	1305
Eam1104I	CTCTTC	2 cut(s)	1051, 2356
EarI	CTCTTC	2 cut(s)	1051, 2356
Ecl136II	GAGCTC	2 cut(s)	1705, 2042
Eco130I	CCWWGG	2 cut(s)	387, 1125
Eco24I	GRGCYC	2 cut(s)	1707, 2044
Eco31I	GGTCTC	1 cut(s)	195
Eco32I	GATATC	1 cut(s)	981
Eco47I	GGWCC	3 cut(s)	707, 857, 2341
Eco53kI	GAGCTC	2 cut(s)	1705, 2042
Eco57I	CTGAAG	4 cut(s)	68, 1452, 1487, 2349
Eco88I	CYCGRG	1 cut(s)	1140
Eco91I	GGTNACC	1 cut(s)	391
EcoICRI	GAGCTC	2 cut(s)	1705, 2042
EcoO109I	RGGNCCY	1 cut(s)	2341
EcoO65I	GGTNACC	1 cut(s)	391
EcoRII	CCWGG	2 cut(s)	178, 895
EcoRV	GATATC	1 cut(s)	981
EcoT14I	CCWWGG	2 cut(s)	387, 1125
EcoT22I	ATGCAT	1 cut(s)	2209
EcoT38I	GRGCYC	2 cut(s)	1707, 2044
ErhI	CCWWGG	2 cut(s)	387, 1125
Esp3I	CGTCTC	1 cut(s)	1960
FalI	AAGNNNNNCTT	2 cut(s)	90, 122
FaqI	GGGAC	3 cut(s)	770, 870, 1123
FauI	CCCGC	1 cut(s)	560
FbaI	TGATCA	1 cut(s)	534
FblI	GTMKAC	2 cut(s)	613, 1566
Fnu4HI	GCNGC	8 cut(s)	135, 156, 273, 623, 1085, 1851, 2374, 2377
FokI	GGATG	3 cut(s)	719, 1655, 2230
FriOI	GRGCYC	2 cut(s)	1707, 2044
Fsp4HI	GCNGC	8 cut(s)	135, 156, 273, 623, 1085, 1851, 2374, 2377
FspBI	CTAG	2 cut(s)	882, 2234
GlaI	GCGC	3 cut(s)	96, 159, 247
GluI	GCNGC	8 cut(s)	135, 156, 273, 623, 1085, 1851, 2374, 2377
GsaI	CCCAGC	2 cut(s)	1559, 2191
GsuI	CTGGAG	3 cut(s)	216, 765, 2028
HaeIII	GGCC	5 cut(s)	1195, 2027, 2124, 2180, 2317
HapII	CCGG	3 cut(s)	495, 1141, 1684
HgaI	GACGC	3 cut(s)	602, 1053, 1942
HhaI	GCGC	3 cut(s)	97, 160, 248
Hin6I	GCGC	3 cut(s)	95, 158, 246
HinP1I	GCGC	3 cut(s)	95, 158, 246
HincII	GTYRAC	1 cut(s)	556
HindII	GTYRAC	1 cut(s)	556
HindIII	AAGCTT	1 cut(s)	600
HinfI	GANTC	6 cut(s)	1117, 1136, 1324, 1680, 2054, 2149
HpaI	GTTAAC	1 cut(s)	556
HpaII	CCGG	3 cut(s)	495, 1141, 1684
HphI	GGTGA	8 cut(s)	299, 308, 509, 807, 822, 1480, 1625, 2113
HpyAV	CCTTC	6 cut(s)	378, 831, 873, 1461, 1633, 1934
HpyCH4III	ACNGT	3 cut(s)	1444, 1718, 1964
HpyCH4IV	ACGT	1 cut(s)	651
HpyF10VI	GCNNNNNNNGC	7 cut(s)	103, 166, 243, 631, 1423, 1847, 1856
HpyF3I	CTNAG	2 cut(s)	728, 1527
HpySE526I	ACGT	1 cut(s)	651
HspAI	GCGC	3 cut(s)	95, 158, 246
KpnI	GGTACC	1 cut(s)	1050
Ksp22I	TGATCA	1 cut(s)	534
KspAI	GTTAAC	1 cut(s)	556
Lsp1109I	GCAGC	6 cut(s)	121, 142, 259, 634, 1837, 2388
LweI	GCATC	5 cut(s)	499, 741, 1096, 1335, 2194
MaeI	CTAG	2 cut(s)	882, 2234
MaeII	ACGT	1 cut(s)	651
MaeIII	GTNAC	6 cut(s)	382, 391, 654, 749, 1106, 2033
MbiI	CCGCTC	1 cut(s)	567
MfeI	CAATTG	1 cut(s)	249
MflI	RGATCY	3 cut(s)	23, 51, 661
MhlI	GDGCHC	3 cut(s)	1576, 1707, 2044
MlyI	GAGTC	2 cut(s)	1145, 2063
MmeI	TCCRAC	2 cut(s)	967, 2280
Mph1103I	ATGCAT	1 cut(s)	2209
MroXI	GAANNNNTTC	2 cut(s)	63, 2334
MslI	CAYNNNNRTG	5 cut(s)	354, 467, 1692, 1835, 2076
MspA1I	CMGCKG	2 cut(s)	634, 2379
MspI	CCGG	3 cut(s)	495, 1141, 1684
MspR9I	CCNGG	4 cut(s)	180, 897, 1141, 1142
MunI	CAATTG	1 cut(s)	249
MvaI	CCWGG	2 cut(s)	180, 897
MvnI	CGCG	2 cut(s)	1953, 2373
MwoI	GCNNNNNNNGC	7 cut(s)	103, 166, 243, 631, 1423, 1847, 1856
NciI	CCSGG	2 cut(s)	1141, 1142
NcoI	CCATGG	2 cut(s)	387, 1125
NlaIV	GGNNCC	6 cut(s)	709, 810, 858, 1048, 1993, 2304
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	2 cut(s)	749, 1106
NsiI	ATGCAT	1 cut(s)	2209
NspI	RCATGY	4 cut(s)	65, 155, 1555, 1691
PaeI	GCATGC	2 cut(s)	1555, 1691
PagI	TCATGA	1 cut(s)	2194
PciI	ACATGT	1 cut(s)	61
PdmI	GAANNNNTTC	2 cut(s)	63, 2334
PfeI	GAWTC	4 cut(s)	1117, 1324, 1680, 2149
PflMI	CCANNNNNTGG	1 cut(s)	866
PinAI	ACCGGT	1 cut(s)	494
PkrI	GCNGC	8 cut(s)	136, 157, 274, 624, 1086, 1852, 2375, 2378
PleI	GAGTC	2 cut(s)	1144, 2062
PpsI	GAGTC	2 cut(s)	1144, 2062
PpuMI	RGGWCCY	1 cut(s)	2341
PscI	ACATGT	1 cut(s)	61
Psp124BI	GAGCTC	2 cut(s)	1707, 2044
Psp5II	RGGWCCY	1 cut(s)	2341
Psp6I	CCWGG	2 cut(s)	178, 895
PspEI	GGTNACC	1 cut(s)	391
PspFI	CCCAGC	2 cut(s)	1555, 2187
PspGI	CCWGG	2 cut(s)	178, 895
PspN4I	GGNNCC	6 cut(s)	709, 810, 858, 1048, 1993, 2304
PspPI	GGNCC	5 cut(s)	707, 857, 1194, 2178, 2341
PspPPI	RGGWCCY	1 cut(s)	2341
PstI	CTGCAG	1 cut(s)	1760
PsuI	RGATCY	3 cut(s)	23, 51, 661
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	7 cut(s)	692, 1002, 1017, 1048, 1290, 1754, 1899
RsaNI	GTAC	7 cut(s)	691, 1001, 1016, 1047, 1289, 1753, 1898
RseI	CAYNNNNRTG	5 cut(s)	354, 467, 1692, 1835, 2076
SacI	GAGCTC	2 cut(s)	1707, 2044
SatI	GCNGC	8 cut(s)	135, 156, 273, 623, 1085, 1851, 2374, 2377
Sau96I	GGNCC	5 cut(s)	707, 857, 1194, 2178, 2341
ScaI	AGTACT	1 cut(s)	1754
SchI	GAGTC	2 cut(s)	1145, 2063
ScrFI	CCNGG	4 cut(s)	180, 897, 1141, 1142
SduI	GDGCHC	3 cut(s)	1576, 1707, 2044
SfaNI	GCATC	5 cut(s)	499, 741, 1096, 1335, 2194
SfcI	CTRYAG	2 cut(s)	1567, 1756
SinI	GGWCC	3 cut(s)	707, 857, 2341
SmaI	CCCGGG	1 cut(s)	1142
SmiMI	CAYNNNNRTG	5 cut(s)	354, 467, 1692, 1835, 2076
SmlI	CTYRAG	2 cut(s)	670, 1844
SmoI	CTYRAG	2 cut(s)	670, 1844
SphI	GCATGC	2 cut(s)	1555, 1691
SsiI	CCGC	5 cut(s)	567, 1085, 1951, 2373, 2379
SspMI	CTAG	2 cut(s)	882, 2234
SstI	GAGCTC	2 cut(s)	1707, 2044
StyD4I	CCNGG	4 cut(s)	178, 895, 1139, 1140
StyI	CCWWGG	2 cut(s)	387, 1125
TaaI	ACNGT	3 cut(s)	1444, 1718, 1964
TaiI	ACGT	1 cut(s)	654
TaqI	TCGA	3 cut(s)	2152, 2223, 2287
TatI	WGTACW	3 cut(s)	690, 1000, 1752
TauI	GCSGC	2 cut(s)	1087, 2376
TfiI	GAWTC	4 cut(s)	1117, 1324, 1680, 2149
TscAI	CASTG	4 cut(s)	239, 427, 1449, 1776
TseFI	GTSAC	2 cut(s)	749, 1106
TseI	GCWGC	6 cut(s)	134, 155, 272, 622, 1850, 2376
Tsp45I	GTSAC	2 cut(s)	749, 1106
TspDTI	ATGAA	4 cut(s)	438, 1337, 1812, 2183
TspGWI	ACGGA	6 cut(s)	361, 541, 768, 1984, 2052, 2161
TspMI	CCCGGG	1 cut(s)	1140
TspRI	CASTG	4 cut(s)	239, 427, 1449, 1776
Van91I	CCANNNNNTGG	1 cut(s)	866
VpaK11BI	GGWCC	3 cut(s)	707, 857, 2341
XapI	RAATTY	6 cut(s)	739, 766, 931, 1799, 1906, 2048
XceI	RCATGY	4 cut(s)	65, 155, 1555, 1691
XcmI	CCANNNNNNNNNTGG	1 cut(s)	802
XmaI	CCCGGG	1 cut(s)	1140
XmiI	GTMKAC	2 cut(s)	613, 1566
XmnI	GAANNNNTTC	2 cut(s)	63, 2334
XspI	CTAG	2 cut(s)	882, 2234
ZrmI	AGTACT	1 cut(s)	1754
Zsp2I	ATGCAT	1 cut(s)	2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.