Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Reverse (-)

79046182 .. 79052288

Gene Structure 6107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG574600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGAGAGCAATGGGGACGAGAAGATCTGAATTGGAGTACAAGGAGCTGAAGATCTGCGAACAGGTTTTGATTGCGTTTGTATTGATTTGCTTGGTGCAAGTTTCGCTTGCAGCTACTAATATGCAAGATGTTGCGGCGATTAACAGCTTACATGCTGCACTCGGCACGCCCGTTCTTCCTGGTTGGACTTCTGCTGGGGGAGACCCTTGTGGGGAAGCATGGCAAGGGGTTCAGTGCAATGACAGCACAATTATATCAATAACTCTTAATGCTGCCAATTTGGGAGGAGAATTGGGTGAGCACTTAGGATCGTTCACTTCAATGAGAACAATAGATCTGAGCAACAATCATATTGGTGGAAGTATACCTTCCATTTTACCTGTAACCATGCGAACCTTTTTTCTTTCAGCTAATCAATTGACCGGAAGTGTCCCCATTTCTTTGGCTTCATTGGTTGAGCTCACAGATATGTCTCTTAACAATAATCTCTTAACTGGTGAAGTACCAGATGTGTTTGAAAGCCTTACAGCGTTGATCAATTTAGATTTGTCTGGTAACAATTTGAGTGGGCACCTGCCACCGTCTCTAGAAAACGCTAAAGCTTTGACCAGTCTACATTTGCAGAACAATCAGCTATCTGGAACACTTGACGTGTTGCAGGATCTTCCCTTGACCGATCTGAATATAGAGAATAACCTATTTGCTGGACCCATTCCTTCAAAGTTGCTGAGCATCCCAAATTTTAGAAGTGATGGAAATCCATTAAATTCGTCTATTGCTCCAGTCCCTCCACCCACATCTCCGTTGGCTCTGTCACCTCCTTCGACTACACCACCATCTCCTTATGCCTTTTGGGGACCACCTTCTGGAAAAACACCACCTGGTAAAACACCACCTGGAACACCACCCGCATCTGCACAAGAGAAATCAAATTCTGGAAAAGCAAATAGCTTTTTTACTACTAAAAGGGTAGTTGGGATATCAATTGGAGGGGTGTTTGTACTTATTATTTTGGTACTAGTAGTTTTGTTTCTTATGCCAAGAGCTACCAGACGAAGAGGAGAGACTGACGACAGAATTTCCAAGCCGCATCAAATAGGAGCTTATCGCGACAGGGAGAATCCACCCATGGATAATGGGTCCTTGGTTCAACCAAACAATCAATTACAGAAAGTTCCGAAAGAGGAAGTTATGAGGCCCAAAGAGGATAATGAAACAGAACCCCGAAGACCGTGGGCAATGCCAAAGTCAAATGATGAGCAAGATAGAATTGTCCAAAGAATGAGTGCAGTACCCAAACAACGAGATGGTCATGTGGTTGATATGAGTCGACTTAATTCGTTTTTGATGCCTCCCCCCCCTCCTCCTCCACCACCCCCTCCTCCACCACCATTTCCTGATGAGACGGTCATTGTAAAGCCAATTGTACCAACTGAAGTAAAGACATTGAAGCCTTCCACCAGAAGTCTAAACCTCACAATTTCTGCCAAGTCTTTCAGCATTGCTTCACTTCAGCAATATACAAACAGCTTTTCTCAGGATAATCTTATAGGAGCGGGCATGCTGGGAAGTGTCTATAGGGCACAGCTTCCTGATGGAAAGCTCCTTGCAGTCAAGAAATTGGACAAGAGAGCTTCCAATCAGCAGAAGGATGAGGAGTTTCTTGAACTGGTAAACACCATTGATAGCATCCGGCATGCTAATGTTGTAGAGCTCATAGGTTACTGTGCAGAGCATGGTCAAAGGCTTCTTATCTACGAGTATTGCAGTAATGGTTCACTGCATGATTGTCTGCACTCGGAGGATGAATTTAGGAAGAAACTATCGTGGAATACTCGCATAAGAATGGCACTAGGAGCTGCAAGAGCTTTGGAGTATTTACATGAGGTCTGTCAGCCACGTATTGTACACAGGAATTTCAAGTCTAACAACCTTCTCCTTGATGATGACCTTTCTATCCATGTTTCTGAGTGTGGCTTGGCTTCCTTAATATCATCTGGCTCCGTAAGTCAGTTGTCAGGGCATCTGCTATCAGCTTATGGTTACGGAGCTCCAGAATTTGATTCAGGAATTTATACTCATCAGAGTGATGTTTACAGCTTTGGTGTAGTGATGTTAGAACTATTAACAGGCCGAAAATCCCATGACAGGACACGGACTCGAGCAGAGCAATTCCTGGTTAGATGGGCCATTCCCCAGCTTCATGACATTGATGCATTATCAAGGATGGTCGATCCCTCTCTAAACAGAGAATATCCTACAAAATCCTTATCACACTTTGCTGACATTATATCTCGATGCGTTCAGTCGGAGCCAGAGTTCAGGCCGCCAATGTCTGAAGTTGTTCAGGACCTATTAGACATGATACGAAGAGAGCCTCGCGGCAGCGGATCAAGTGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

801

Amino Acids

87.67

Weight (kDa)

5.99

Isoelectric Point (pI)

42.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	154 - 212	7.2e-06	Leucine rich repeat
Pkinase	PF00069	512 - 784	6.7e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	514 - 785	9.6e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	582
Acc36I	ACCTGC	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	570
AccB7I	CCANNNNNTGG	1 cut(s)	866
AccBSI	CCGCTC	1 cut(s)	1556
AccI	GTMKAC	3 cut(s)	364, 613, 1330
AccII	CGCG	2 cut(s)	1110, 2382
AciI	CCGC	7 cut(s)	134, 909, 1088, 1556, 2327, 2382, 2388
AclWI	GGATC	4 cut(s)	316, 669, 2228, 2398
AcsI	RAATTY	8 cut(s)	739, 766, 931, 1077, 1808, 1915, 2057, 2070
AcuI	CTGAAG	4 cut(s)	68, 1455, 1496, 2358
AfaI	GTAC	7 cut(s)	38, 504, 1002, 1017, 1293, 1428, 1908
AfiI	CCNNNNNNNGG	3 cut(s)	211, 866, 2148
AflIII	ACRYGT	1 cut(s)	651
AgsI	TTSAA	7 cut(s)	321, 518, 720, 1151, 1450, 1667, 1921
AhlI	ACTAGT	1 cut(s)	1018
AjiI	CACGTC	1 cut(s)	652
AjnI	CCWGG	4 cut(s)	178, 880, 895, 2175
AloI	GAACNNNNNNTCC	2 cut(s)	2303, 2335
Alw21I	GWGCWC	4 cut(s)	303, 462, 1716, 2053
Alw26I	GTCTC	5 cut(s)	195, 477, 588, 1058, 1397
AlwI	GGATC	4 cut(s)	316, 669, 2228, 2398
Ama87I	CYCGRG	1 cut(s)	2160
AoxI	GGCC	4 cut(s)	1196, 2131, 2187, 2324
ApeKI	GCWGC	5 cut(s)	110, 155, 272, 1859, 2385
ApoI	RAATTY	8 cut(s)	739, 766, 931, 1077, 1808, 1915, 2057, 2070
Asp700I	GAANNNNTTC	1 cut(s)	2343
AspS9I	GGNCC	6 cut(s)	707, 857, 1140, 1197, 2187, 2350
AsuHPI	GGTGA	3 cut(s)	308, 509, 807
AvaI	CYCGRG	1 cut(s)	2160
AvaII	GGWCC	4 cut(s)	707, 857, 1140, 2350
BaeGI	GKGCMC	2 cut(s)	573, 1585
BanI	GGYRCC	1 cut(s)	570
BanII	GRGCYC	3 cut(s)	462, 1716, 2053
BbsI	GAAGAC	1 cut(s)	1234
Bbv12I	GWGCWC	4 cut(s)	303, 462, 1716, 2053
BbvI	GCAGC	5 cut(s)	122, 142, 259, 1846, 2397
BccI	CCATC	6 cut(s)	746, 844, 1301, 1589, 2178, 2221
BciT130I	CCWGG	4 cut(s)	180, 882, 897, 2177
BclI	TGATCA	1 cut(s)	534
BcoDI	GTCTC	5 cut(s)	195, 477, 588, 1058, 1397
BcuI	ACTAGT	1 cut(s)	1018
BfaI	CTAG	3 cut(s)	587, 1019, 1853
BfmI	CTRYAG	1 cut(s)	1576
BfuAI	ACCTGC	1 cut(s)	582
BglII	AGATCT	3 cut(s)	23, 51, 334
BisI	GCNGC	9 cut(s)	111, 135, 156, 273, 1088, 1860, 2327, 2383, 2386
BlpI	GCTNAGC	1 cut(s)	728
BlsI	GCNGC	9 cut(s)	112, 136, 157, 274, 1089, 1861, 2328, 2384, 2387
Bme1390I	CCNGG	4 cut(s)	180, 882, 897, 2177
Bme18I	GGWCC	4 cut(s)	707, 857, 1140, 2350
BmeT110I	CYCGRG	1 cut(s)	2160
BmgBI	CACGTC	1 cut(s)	652
BmgT120I	GGNCC	6 cut(s)	707, 857, 1140, 1197, 2187, 2350
BmiI	GGNNCC	6 cut(s)	572, 709, 858, 1141, 2002, 2313
BmrFI	CCNGG	4 cut(s)	180, 882, 897, 2177
BmsI	GCATC	8 cut(s)	741, 920, 1099, 1338, 1698, 2032, 2203, 2288
BpiI	GAAGAC	1 cut(s)	1234
BpmI	CTGGAG	2 cut(s)	765, 2037
Bpu1102I	GCTNAGC	1 cut(s)	728
BsaAI	YACGTR	1 cut(s)	1901
BsaBI	GATNNNNATC	1 cut(s)	756
BsaI	GGTCTC	1 cut(s)	195
BsaJI	CCNNGG	3 cut(s)	1128, 1143, 1232
BsaWI	WCCGGW	1 cut(s)	422
BsaXI	ACNNNNNCTCC	2 cut(s)	2303, 2333
Bsc4I	CCNNNNNNNGG	3 cut(s)	211, 866, 2148
Bse1I	ACTGG	4 cut(s)	499, 609, 782, 1674
Bse3DI	GCAATG	4 cut(s)	15, 244, 1245, 1500
Bse8I	GATNNNNATC	1 cut(s)	756
BseBI	CCWGG	4 cut(s)	180, 882, 897, 2177
BseDI	CCNNGG	3 cut(s)	1128, 1143, 1232
BseGI	GGATG	5 cut(s)	732, 1657, 1689, 1810, 2232
BseJI	GATNNNNATC	1 cut(s)	756
BseLI	CCNNNNNNNGG	3 cut(s)	211, 866, 2148
BseMI	GCAATG	4 cut(s)	15, 244, 1245, 1500
BseMII	CTCAG	4 cut(s)	329, 719, 1550, 1959
BseNI	ACTGG	4 cut(s)	499, 609, 782, 1674
BseRI	GAGGAG	6 cut(s)	300, 1074, 1353, 1356, 1371, 1670
BseSI	GKGCMC	2 cut(s)	573, 1585
BseXI	GCAGC	5 cut(s)	122, 142, 259, 1846, 2397
BseYI	CCCAGC	3 cut(s)	194, 1564, 2196
BsgI	GTGCAG	5 cut(s)	141, 900, 1308, 1749, 1778
Bsh1236I	CGCG	2 cut(s)	1110, 2382
BshFI	GGCC	4 cut(s)	1198, 2133, 2189, 2326
BshNI	GGYRCC	1 cut(s)	570
BsiHKAI	GWGCWC	4 cut(s)	303, 462, 1716, 2053
BsiHKCI	CYCGRG	1 cut(s)	2160
BsiSI	CCGG	2 cut(s)	423, 1693
BslFI	GGGAC	4 cut(s)	28, 416, 770, 870
BslI	CCNNNNNNNGG	3 cut(s)	211, 866, 2148
BsmAI	GTCTC	5 cut(s)	195, 477, 588, 1058, 1397
BsmBI	CGTCTC	2 cut(s)	588, 1397
BsmFI	GGGAC	4 cut(s)	28, 416, 770, 870
BsnI	GGCC	4 cut(s)	1198, 2133, 2189, 2326
Bso31I	GGTCTC	1 cut(s)	195
BsoBI	CYCGRG	1 cut(s)	2160
Bsp1286I	GDGCHC	6 cut(s)	303, 462, 573, 1585, 1716, 2053
Bsp1407I	TGTACA	1 cut(s)	1906
Bsp143I	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
Bsp1720I	GCTNAGC	1 cut(s)	728
Bsp19I	CCATGG	1 cut(s)	1128
Bsp68I	TCGCGA	1 cut(s)	1110
BspACI	CCGC	7 cut(s)	134, 909, 1088, 1556, 2327, 2382, 2388
BspANI	GGCC	4 cut(s)	1198, 2133, 2189, 2326
BspCNI	CTCAG	4 cut(s)	330, 720, 1549, 1960
BspFNI	CGCG	2 cut(s)	1110, 2382
BspHI	TCATGA	1 cut(s)	2203
BspLI	GGNNCC	6 cut(s)	572, 709, 858, 1141, 2002, 2313
BspMI	ACCTGC	1 cut(s)	582
BspPI	GGATC	4 cut(s)	316, 669, 2228, 2398
BspT107I	GGYRCC	1 cut(s)	570
BspTNI	GGTCTC	1 cut(s)	195
BsrBI	CCGCTC	1 cut(s)	1556
BsrDI	GCAATG	4 cut(s)	15, 244, 1245, 1500
BsrGI	TGTACA	1 cut(s)	1906
BsrI	ACTGG	4 cut(s)	499, 609, 782, 1674
BssECI	CCNNGG	3 cut(s)	1128, 1143, 1232
BssMI	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
BssNAI	GTATAC	1 cut(s)	365
BssT1I	CCWWGG	2 cut(s)	1128, 1143
Bst1107I	GTATAC	1 cut(s)	365
Bst2UI	CCWGG	4 cut(s)	180, 882, 897, 2177
Bst4CI	ACNGT	4 cut(s)	582, 1233, 1408, 1727
Bst6I	CTCTTC	2 cut(s)	1051, 2365
BstAUI	TGTACA	1 cut(s)	1906
BstBAI	YACGTR	1 cut(s)	1901
BstC8I	GCNNGC	5 cut(s)	108, 167, 1558, 1562, 1698
BstDEI	CTNAG	5 cut(s)	304, 338, 728, 1536, 1968
BstDSI	CCRYGG	2 cut(s)	1128, 1232
BstF5I	GGATG	5 cut(s)	732, 1657, 1689, 1810, 2232
BstFNI	CGCG	2 cut(s)	1110, 2382
BstKTI	GATC	9 cut(s)	26, 54, 311, 337, 537, 664, 679, 2236, 2393
BstMAI	GTCTC	5 cut(s)	195, 477, 588, 1058, 1397
BstMBI	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
BstMWI	GCNNNNNNNGC	4 cut(s)	103, 243, 1856, 1865
BstNI	CCWGG	4 cut(s)	180, 882, 897, 2177
BstNSI	RCATGY	3 cut(s)	155, 1564, 1700
BstSCI	CCNGG	4 cut(s)	178, 880, 895, 2175
BstSFI	CTRYAG	1 cut(s)	1576
BstSLI	GKGCMC	2 cut(s)	573, 1585
BstUI	CGCG	2 cut(s)	1110, 2382
BstV1I	GCAGC	5 cut(s)	122, 142, 259, 1846, 2397
BstV2I	GAAGAC	1 cut(s)	1234
BstX2I	RGATCY	4 cut(s)	23, 51, 334, 661
BstXI	CCANNNNNNTGG	1 cut(s)	442
BstYI	RGATCY	4 cut(s)	23, 51, 334, 661
BstZ17I	GTATAC	1 cut(s)	365
BsuRI	GGCC	4 cut(s)	1198, 2133, 2189, 2326
BtgI	CCRYGG	2 cut(s)	1128, 1232
BtrI	CACGTC	1 cut(s)	652
BtsCI	GGATG	5 cut(s)	732, 1657, 1689, 1810, 2232
BtsI	GCAGTG	1 cut(s)	1778
BtsIMutI	CAGTG	2 cut(s)	239, 1778
BtuMI	TCGCGA	1 cut(s)	1110
BveI	ACCTGC	1 cut(s)	582
Cac8I	GCNNGC	5 cut(s)	108, 167, 1558, 1562, 1698
CciI	TCATGA	1 cut(s)	2203
Cfr13I	GGNCC	6 cut(s)	707, 857, 1140, 1197, 2187, 2350
CsiI	ACCWGGT	1 cut(s)	880
Csp6I	GTAC	7 cut(s)	37, 503, 1001, 1016, 1292, 1427, 1907
CspCI	CAANNNNNGTGG	2 cut(s)	547, 582
CviQI	GTAC	7 cut(s)	37, 503, 1001, 1016, 1292, 1427, 1907
DdeI	CTNAG	5 cut(s)	304, 338, 728, 1536, 1968
DpnI	GATC	9 cut(s)	25, 53, 310, 336, 536, 663, 678, 2235, 2392
DpnII	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
Eam1104I	CTCTTC	2 cut(s)	1051, 2365
EarI	CTCTTC	2 cut(s)	1051, 2365
Ecl136II	GAGCTC	3 cut(s)	460, 1714, 2051
Eco130I	CCWWGG	2 cut(s)	1128, 1143
Eco24I	GRGCYC	3 cut(s)	462, 1716, 2053
Eco31I	GGTCTC	1 cut(s)	195
Eco32I	GATATC	1 cut(s)	981
Eco47I	GGWCC	4 cut(s)	707, 857, 1140, 2350
Eco53kI	GAGCTC	3 cut(s)	460, 1714, 2051
Eco57I	CTGAAG	4 cut(s)	68, 1455, 1496, 2358
Eco88I	CYCGRG	1 cut(s)	2160
EcoICRI	GAGCTC	3 cut(s)	460, 1714, 2051
EcoO109I	RGGNCCY	2 cut(s)	1140, 2350
EcoRII	CCWGG	4 cut(s)	178, 880, 895, 2175
EcoRV	GATATC	1 cut(s)	981
EcoT14I	CCWWGG	2 cut(s)	1128, 1143
EcoT22I	ATGCAT	1 cut(s)	2218
EcoT38I	GRGCYC	3 cut(s)	462, 1716, 2053
ErhI	CCWWGG	2 cut(s)	1128, 1143
Esp3I	CGTCTC	2 cut(s)	588, 1397
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 352, 384
FaqI	GGGAC	4 cut(s)	28, 416, 770, 870
FauI	CCCGC	2 cut(s)	916, 1549
FbaI	TGATCA	1 cut(s)	534
FblI	GTMKAC	3 cut(s)	364, 613, 1330
Fnu4HI	GCNGC	9 cut(s)	111, 135, 156, 273, 1088, 1860, 2327, 2383, 2386
FokI	GGATG	5 cut(s)	719, 1664, 1676, 1817, 2239
FriOI	GRGCYC	3 cut(s)	462, 1716, 2053
Fsp4HI	GCNGC	9 cut(s)	111, 135, 156, 273, 1088, 1860, 2327, 2383, 2386
FspBI	CTAG	3 cut(s)	587, 1019, 1853
GluI	GCNGC	9 cut(s)	111, 135, 156, 273, 1088, 1860, 2327, 2383, 2386
GsaI	CCCAGC	3 cut(s)	198, 1568, 2200
GsuI	CTGGAG	2 cut(s)	765, 2037
HaeIII	GGCC	4 cut(s)	1198, 2133, 2189, 2326
HapII	CCGG	2 cut(s)	423, 1693
HincII	GTYRAC	1 cut(s)	1331
HindII	GTYRAC	1 cut(s)	1331
HindIII	AAGCTT	1 cut(s)	600
HinfI	GANTC	4 cut(s)	1120, 1327, 2063, 2158
HpaII	CCGG	2 cut(s)	423, 1693
HphI	GGTGA	3 cut(s)	308, 509, 807
Hpy166II	GTNNAC	8 cut(s)	315, 365, 614, 1331, 1675, 1778, 1909, 2095
Hpy188I	TCNGA	9 cut(s)	28, 339, 681, 1179, 1801, 1969, 2085, 2311, 2338
Hpy8I	GTNNAC	8 cut(s)	315, 365, 614, 1331, 1675, 1778, 1909, 2095
HpyAV	CCTTC	7 cut(s)	378, 726, 831, 873, 1464, 1642, 1943
HpyCH4III	ACNGT	4 cut(s)	582, 1233, 1408, 1727
HpyCH4IV	ACGT	2 cut(s)	651, 1900
HpyF10VI	GCNNNNNNNGC	4 cut(s)	103, 243, 1856, 1865
HpyF3I	CTNAG	5 cut(s)	304, 338, 728, 1536, 1968
HpySE526I	ACGT	2 cut(s)	651, 1900
Ksp22I	TGATCA	1 cut(s)	534
Kzo9I	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
Lsp1109I	GCAGC	5 cut(s)	122, 142, 259, 1846, 2397
LweI	GCATC	8 cut(s)	741, 920, 1099, 1338, 1698, 2032, 2203, 2288
MabI	ACCWGGT	1 cut(s)	880
MaeI	CTAG	3 cut(s)	587, 1019, 1853
MaeII	ACGT	2 cut(s)	651, 1900
MaeIII	GTNAC	5 cut(s)	382, 554, 813, 1721, 2042
MalI	GATC	9 cut(s)	25, 53, 310, 336, 536, 663, 678, 2235, 2392
MbiI	CCGCTC	1 cut(s)	1556
MboI	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
MboII	GAAGA	8 cut(s)	33, 61, 167, 656, 1068, 1239, 1828, 2382
MfeI	CAATTG	3 cut(s)	416, 984, 1422
MflI	RGATCY	4 cut(s)	23, 51, 334, 661
MhlI	GDGCHC	6 cut(s)	303, 462, 573, 1585, 1716, 2053
MlyI	GAGTC	2 cut(s)	1336, 2152
MmeI	TCCRAC	2 cut(s)	164, 2289
Mph1103I	ATGCAT	1 cut(s)	2218
MroXI	GAANNNNTTC	1 cut(s)	2343
MseI	TTAA	8 cut(s)	141, 267, 477, 491, 764, 1335, 1988, 2126
MslI	CAYNNNNRTG	6 cut(s)	320, 354, 467, 1701, 1844, 2085
MspA1I	CMGCKG	1 cut(s)	2388
MspI	CCGG	2 cut(s)	423, 1693
MspR9I	CCNGG	4 cut(s)	180, 882, 897, 2177
MunI	CAATTG	3 cut(s)	416, 984, 1422
MvaI	CCWGG	4 cut(s)	180, 882, 897, 2177
MvnI	CGCG	2 cut(s)	1110, 2382
MwoI	GCNNNNNNNGC	4 cut(s)	103, 243, 1856, 1865
NcoI	CCATGG	1 cut(s)	1128
NdeII	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
NlaIV	GGNNCC	6 cut(s)	572, 709, 858, 1141, 2002, 2313
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	1 cut(s)	813
NruI	TCGCGA	1 cut(s)	1110
NsiI	ATGCAT	1 cut(s)	2218
NspI	RCATGY	3 cut(s)	155, 1564, 1700
PaeI	GCATGC	2 cut(s)	1564, 1700
PaeR7I	CTCGAG	1 cut(s)	2160
PagI	TCATGA	1 cut(s)	2203
PaqCI	CACCTGC	1 cut(s)	582
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PdmI	GAANNNNTTC	1 cut(s)	2343
PfeI	GAWTC	2 cut(s)	1120, 2063
PflMI	CCANNNNNTGG	1 cut(s)	866
PkrI	GCNGC	9 cut(s)	112, 136, 157, 274, 1089, 1861, 2328, 2384, 2387
PleI	GAGTC	2 cut(s)	1335, 2152
PpsI	GAGTC	2 cut(s)	1335, 2152
Ppu21I	YACGTR	1 cut(s)	1901
PpuMI	RGGWCCY	2 cut(s)	1140, 2350
Psp124BI	GAGCTC	3 cut(s)	462, 1716, 2053
Psp5II	RGGWCCY	2 cut(s)	1140, 2350
Psp6I	CCWGG	4 cut(s)	178, 880, 895, 2175
PspFI	CCCAGC	3 cut(s)	194, 1564, 2196
PspGI	CCWGG	4 cut(s)	178, 880, 895, 2175
PspN4I	GGNNCC	6 cut(s)	572, 709, 858, 1141, 2002, 2313
PspPI	GGNCC	6 cut(s)	707, 857, 1140, 1197, 2187, 2350
PspPPI	RGGWCCY	2 cut(s)	1140, 2350
PspXI	VCTCGAGB	1 cut(s)	2160
PsuI	RGATCY	4 cut(s)	23, 51, 334, 661
RruI	TCGCGA	1 cut(s)	1110
RsaI	GTAC	7 cut(s)	38, 504, 1002, 1017, 1293, 1428, 1908
RsaNI	GTAC	7 cut(s)	37, 503, 1001, 1016, 1292, 1427, 1907
RseI	CAYNNNNRTG	6 cut(s)	320, 354, 467, 1701, 1844, 2085
SacI	GAGCTC	3 cut(s)	462, 1716, 2053
SalI	GTCGAC	1 cut(s)	1329
SaqAI	TTAA	8 cut(s)	141, 267, 477, 491, 764, 1335, 1988, 2126
SatI	GCNGC	9 cut(s)	111, 135, 156, 273, 1088, 1860, 2327, 2383, 2386
Sau3AI	GATC	9 cut(s)	23, 51, 308, 334, 534, 661, 676, 2233, 2390
Sau96I	GGNCC	6 cut(s)	707, 857, 1140, 1197, 2187, 2350
SchI	GAGTC	2 cut(s)	1336, 2152
ScrFI	CCNGG	4 cut(s)	180, 882, 897, 2177
SduI	GDGCHC	6 cut(s)	303, 462, 573, 1585, 1716, 2053
SexAI	ACCWGGT	1 cut(s)	880
SfaNI	GCATC	8 cut(s)	741, 920, 1099, 1338, 1698, 2032, 2203, 2288
SfcI	CTRYAG	1 cut(s)	1576
Sfr274I	CTCGAG	1 cut(s)	2160
SinI	GGWCC	4 cut(s)	707, 857, 1140, 2350
SlaI	CTCGAG	1 cut(s)	2160
SmiMI	CAYNNNNRTG	6 cut(s)	320, 354, 467, 1701, 1844, 2085
SmlI	CTYRAG	1 cut(s)	2160
SmoI	CTYRAG	1 cut(s)	2160
SpeI	ACTAGT	1 cut(s)	1018
SphI	GCATGC	2 cut(s)	1564, 1700
SsiI	CCGC	7 cut(s)	134, 909, 1088, 1556, 2327, 2382, 2388
SspMI	CTAG	3 cut(s)	587, 1019, 1853
SstI	GAGCTC	3 cut(s)	462, 1716, 2053
StyD4I	CCNGG	4 cut(s)	178, 880, 895, 2175
StyI	CCWWGG	2 cut(s)	1128, 1143
TaaI	ACNGT	4 cut(s)	582, 1233, 1408, 1727
TaiI	ACGT	2 cut(s)	654, 1903
TaqI	TCGA	5 cut(s)	824, 1330, 2161, 2232, 2296
TaqII	GACCGA	1 cut(s)	689
TatI	WGTACW	3 cut(s)	36, 1000, 1906
TauI	GCSGC	4 cut(s)	137, 1090, 2329, 2385
TfiI	GAWTC	2 cut(s)	1120, 2063
Tru1I	TTAA	8 cut(s)	141, 267, 477, 491, 764, 1335, 1988, 2126
Tru9I	TTAA	8 cut(s)	141, 267, 477, 491, 764, 1335, 1988, 2126
TscAI	CASTG	2 cut(s)	239, 1785
TseFI	GTSAC	1 cut(s)	813
TseI	GCWGC	5 cut(s)	110, 155, 272, 1859, 2385
Tsp45I	GTSAC	1 cut(s)	813
TspDTI	ATGAA	4 cut(s)	438, 1227, 1821, 2192
TspGWI	ACGGA	4 cut(s)	792, 1993, 2061, 2170
TspRI	CASTG	2 cut(s)	239, 1785
Van91I	CCANNNNNTGG	1 cut(s)	866
VpaK11BI	GGWCC	4 cut(s)	707, 857, 1140, 2350
XapI	RAATTY	8 cut(s)	739, 766, 931, 1077, 1808, 1915, 2057, 2070
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	3 cut(s)	155, 1564, 1700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	802
XhoI	CTCGAG	1 cut(s)	2160
XmiI	GTMKAC	3 cut(s)	364, 613, 1330
XmnI	GAANNNNTTC	1 cut(s)	2343
XspI	CTAG	3 cut(s)	587, 1019, 1853
Zsp2I	ATGCAT	1 cut(s)	2218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.