Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004020.1

Orthogroup ID

OG0008562

Physical Location & Seq

Genomic Coordinates Forward (+)

144083 .. 149070

Gene Structure 4988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004020.1_g000030.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

atggggacgagaagatctgaattggagtacaaggagctgaagatctgcgaacaggttttgattgcgtttgtattgatttgcttggtgcaagtttcgcttgcagctactaatatgcaagatgttgcggcgattaacagcttacatgctgcactcggcacgcccgttcttcctgggtggacttctgctgggggagacccttgtggggaagcatggcaaggggttcagtgcaatgacagcacaattatatcaataactcttaatgctgccaatttgggaggagaattgggtgagcacttaggatcgttcacttcaatgagaacaatagatctgagcaacaatcatattggtggaagtataccttccattttacctgtaaccatgcgaaccttttttctttcagctaatcaattgaccggaagtgtccccatttctttggcttcattggttgagctcacagatatgtctcttaacaataatctcttaactggtgaaataccagatgtgtttgaaagccttacagcgttgatcaatttagatttgtctggtaacaatttgagtgggcacctgccaccctctctagaaaacgctaaagctttgaccagtctacatttgcagaacaatcagctatctggaacacttgacgtgttgcaggatcttcccttgaccgatctgaatatagagaataacctatttgctggacccattccttcaaagttgctgagcatcccaaattttagaagtgatggaaatccattaaattcgtctattgctccagtccctccacccacatctccgttggctccgtcacctccttcgactacaccaccatctccttatgccttttggggaccaccttctggaaaaacaccacctggtaaaacaccacctggaacaccacccgcatctgcacaagagaaatcaaattctggaaaagcaaatagcttttttactactaaaagggtagttgggatatcaattggaggggtgtttgtacttattattttggtactagtagttttgtttcttatgccaagagctaccagacgaagaggagagactgacgacagaatttccaagccgcatcaaataggagcttatcgcgacagggagaatccacccatggataatgggtccttggttcaaccaaacaatcaattacagaaagttccgaaagaggaagttatgaggcccaaagagaataatgaaacagaaccccgaagaccatgggcaatgccaaagtcaaatgatgagcaagatagaattgtccaaagaatgagtgcagtacccaaacaacgagatggtcatgtggttgatatgagtcgaattaattcgtttttgatgcctcctccccctcctccaccaccatttcctgatgagacggtcattgtaaagccaattgtaccaactgaagtaaagacagtgaagccttccaccagaagtctaaacctcacaatttctgccaagtctttcaccattgcttcacttcagcaatatacaaacagcttttctcaggacaatcttataggagcgggcatgctgggaagtgtctatagggcacagcttcctgatggaaagctccttgcagtcaagaaattggacaagagagcttccaatcagcagaaggatgaggagtttcttgaactggtaaacaacattgatagaatccggcatgctaatgttgtagagcttataggttactgtgcagagcatggtcaaaggcttcttatctacgagtattgcagtaatggttcactgcatgatactctgcactcggaggatgaatttatgaagaaactatcgtggaatactcgcataagaatggcacttggagctgcaagagctttggagtatttacatgaggtctgtcagccacgtattgtacacaggaatttcaagtctaacaaccttctccttgatgatgacctttctatccatgtttctgactgtggcttggcttccttaatatcatctggctccgtaagccagttgtcagggcatctgctatcagcttatggttacggagctccagaatttgattcaggaatttatactcatcagagtgatgtttacagctttggtgtagtgatgttagaactattaacaggccgaaaatcccatgacaggacacggactcgaggggagcaattcctggttagatgggccattccccagcttcatgacattgatgcattatcaaggatggtcgatccctctctaaacagagaatatcctacaaaatccttatcacactttgctgacattatatctcgatgcgttcagtcggagccagagttcaggccgccaatgtctgaagttgttcaggacctattagacatgatacgaagagagcctcgcggcagcggatcaagtgaagactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007623 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048511 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

792

Amino Acids

86.75

Weight (kDa)

5.99

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008562)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03390 AT4G03390
fragaria_vesca	FvH4_6g44950 FvH4_6g44950 FvH4_6g44950
malus_domestica	MD09G1091500.v1.1 MD17G1081400.v1.1
prunus_persica	Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1 Prupe.3G233500_v2.0.a1
pyrus_communis	pycom09g01720 pycom17g07970
rosa_chinensis	RchiOBHm_Chr2g0162181
rosa_laevigata	RLG00000021326
rosa_multiflora	Rmu_sc0004020.1_g000030
rosa_roxburghii	Rroxscaffold_2G00088260
rosa_rugosa	Rorug02G0495000 Rorug02G0495100
rosa_samantha	Rh2BG574600
rosa_wichuraiana	Rw2G046500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	573
Acc36I	ACCTGC	1 cut(s)	573
AccB1I	GGYRCC	1 cut(s)	561
AccB7I	CCANNNNNTGG	1 cut(s)	857
AccBSI	CCGCTC	1 cut(s)	1529
AccI	GTMKAC	2 cut(s)	355, 604
AccII	CGCG	2 cut(s)	1101, 2355
AciI	CCGC	7 cut(s)	125, 900, 1079, 1529, 2300, 2355, 2361
AclWI	GGATC	4 cut(s)	307, 660, 2201, 2371
AcsI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1781, 1888, 2030, 2043
AcuI	CTGAAG	4 cut(s)	59, 1428, 1469, 2331
AfaI	GTAC	6 cut(s)	29, 993, 1008, 1284, 1401, 1881
AfiI	CCNNNNNNNGG	3 cut(s)	202, 857, 2121
AflIII	ACRYGT	1 cut(s)	642
AgsI	TTSAA	6 cut(s)	312, 509, 711, 1142, 1640, 1894
AhlI	ACTAGT	1 cut(s)	1009
AjiI	CACGTC	1 cut(s)	643
AjnI	CCWGG	4 cut(s)	169, 871, 886, 2148
AloI	GAACNNNNNNTCC	2 cut(s)	2276, 2308
Alw21I	GWGCWC	3 cut(s)	294, 453, 2026
Alw26I	GTCTC	4 cut(s)	186, 468, 1049, 1370
AlwI	GGATC	4 cut(s)	307, 660, 2201, 2371
Ama87I	CYCGRG	1 cut(s)	2133
AoxI	GGCC	4 cut(s)	1187, 2104, 2160, 2297
ApeKI	GCWGC	5 cut(s)	101, 146, 263, 1832, 2358
ApoI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1781, 1888, 2030, 2043
AseI	ATTAAT	1 cut(s)	1326
Asp700I	GAANNNNTTC	2 cut(s)	1327, 2316
AspS9I	GGNCC	6 cut(s)	698, 848, 1131, 1188, 2160, 2323
AsuHPI	GGTGA	4 cut(s)	299, 500, 798, 1462
AvaI	CYCGRG	1 cut(s)	2133
AvaII	GGWCC	4 cut(s)	698, 848, 1131, 2323
BaeGI	GKGCMC	2 cut(s)	564, 1558
BanI	GGYRCC	1 cut(s)	561
BanII	GRGCYC	2 cut(s)	453, 2026
BbsI	GAAGAC	1 cut(s)	1225
Bbv12I	GWGCWC	3 cut(s)	294, 453, 2026
BbvI	GCAGC	5 cut(s)	113, 133, 250, 1819, 2370
BccI	CCATC	6 cut(s)	737, 835, 1292, 1562, 2151, 2194
BciT130I	CCWGG	4 cut(s)	171, 873, 888, 2150
BclI	TGATCA	1 cut(s)	525
BcoDI	GTCTC	4 cut(s)	186, 468, 1049, 1370
BcuI	ACTAGT	1 cut(s)	1009
BfaI	CTAG	2 cut(s)	578, 1010
BfmI	CTRYAG	1 cut(s)	1549
BfuAI	ACCTGC	1 cut(s)	573
BglII	AGATCT	3 cut(s)	14, 42, 325
BisI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1833, 2300, 2356, 2359
BlpI	GCTNAGC	1 cut(s)	719
BlsI	GCNGC	9 cut(s)	103, 127, 148, 265, 1080, 1834, 2301, 2357, 2360
Bme1390I	CCNGG	4 cut(s)	171, 873, 888, 2150
Bme18I	GGWCC	4 cut(s)	698, 848, 1131, 2323
BmeT110I	CYCGRG	1 cut(s)	2133
BmgBI	CACGTC	1 cut(s)	643
BmgT120I	GGNCC	6 cut(s)	698, 848, 1131, 1188, 2160, 2323
BmiI	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1975, 2286
BmrFI	CCNGG	4 cut(s)	171, 873, 888, 2150
BmsI	GCATC	7 cut(s)	732, 911, 1090, 1329, 2005, 2176, 2261
BpiI	GAAGAC	1 cut(s)	1225
BpmI	CTGGAG	2 cut(s)	756, 2010
Bpu1102I	GCTNAGC	1 cut(s)	719
BsaAI	YACGTR	1 cut(s)	1874
BsaBI	GATNNNNATC	1 cut(s)	747
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BsaWI	WCCGGW	1 cut(s)	413
BsaXI	ACNNNNNCTCC	2 cut(s)	2276, 2306
Bsc4I	CCNNNNNNNGG	3 cut(s)	202, 857, 2121
Bse1I	ACTGG	5 cut(s)	490, 600, 773, 1647, 1984
Bse3DI	GCAATG	3 cut(s)	235, 1236, 1473
Bse8I	GATNNNNATC	1 cut(s)	747
BseBI	CCWGG	4 cut(s)	171, 873, 888, 2150
BseDI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BseGI	GGATG	4 cut(s)	723, 1630, 1783, 2205
BseJI	GATNNNNATC	1 cut(s)	747
BseLI	CCNNNNNNNGG	3 cut(s)	202, 857, 2121
BseMI	GCAATG	3 cut(s)	235, 1236, 1473
BseMII	CTCAG	3 cut(s)	320, 710, 1523
BseNI	ACTGG	5 cut(s)	490, 600, 773, 1647, 1984
BseRI	GAGGAG	5 cut(s)	291, 1065, 1335, 1344, 1643
BseSI	GKGCMC	2 cut(s)	564, 1558
BseXI	GCAGC	5 cut(s)	113, 133, 250, 1819, 2370
BseYI	CCCAGC	3 cut(s)	185, 1537, 2169
BsgI	GTGCAG	5 cut(s)	132, 891, 1299, 1722, 1751
Bsh1236I	CGCG	2 cut(s)	1101, 2355
BshFI	GGCC	4 cut(s)	1189, 2106, 2162, 2299
BshNI	GGYRCC	1 cut(s)	561
BsiHKAI	GWGCWC	3 cut(s)	294, 453, 2026
BsiHKCI	CYCGRG	1 cut(s)	2133
BsiSI	CCGG	2 cut(s)	414, 1666
BslFI	GGGAC	4 cut(s)	19, 407, 761, 861
BslI	CCNNNNNNNGG	3 cut(s)	202, 857, 2121
BsmAI	GTCTC	4 cut(s)	186, 468, 1049, 1370
BsmBI	CGTCTC	1 cut(s)	1370
BsmFI	GGGAC	4 cut(s)	19, 407, 761, 861
BsnI	GGCC	4 cut(s)	1189, 2106, 2162, 2299
Bso31I	GGTCTC	1 cut(s)	186
BsoBI	CYCGRG	1 cut(s)	2133
Bsp1286I	GDGCHC	5 cut(s)	294, 453, 564, 1558, 2026
Bsp1407I	TGTACA	1 cut(s)	1879
Bsp143I	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
Bsp1720I	GCTNAGC	1 cut(s)	719
Bsp19I	CCATGG	2 cut(s)	1119, 1223
Bsp68I	TCGCGA	1 cut(s)	1101
BspACI	CCGC	7 cut(s)	125, 900, 1079, 1529, 2300, 2355, 2361
BspANI	GGCC	4 cut(s)	1189, 2106, 2162, 2299
BspCNI	CTCAG	3 cut(s)	321, 711, 1522
BspFNI	CGCG	2 cut(s)	1101, 2355
BspHI	TCATGA	1 cut(s)	2176
BspLI	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1975, 2286
BspMI	ACCTGC	1 cut(s)	573
BspPI	GGATC	4 cut(s)	307, 660, 2201, 2371
BspT107I	GGYRCC	1 cut(s)	561
BspTNI	GGTCTC	1 cut(s)	186
BsrBI	CCGCTC	1 cut(s)	1529
BsrDI	GCAATG	3 cut(s)	235, 1236, 1473
BsrGI	TGTACA	1 cut(s)	1879
BsrI	ACTGG	5 cut(s)	490, 600, 773, 1647, 1984
BssECI	CCNNGG	4 cut(s)	170, 1119, 1134, 1223
BssMI	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
BssNAI	GTATAC	1 cut(s)	356
BssT1I	CCWWGG	3 cut(s)	1119, 1134, 1223
Bst1107I	GTATAC	1 cut(s)	356
Bst2UI	CCWGG	4 cut(s)	171, 873, 888, 2150
Bst4CI	ACNGT	4 cut(s)	1381, 1420, 1700, 1946
Bst6I	CTCTTC	2 cut(s)	1042, 2338
BstAUI	TGTACA	1 cut(s)	1879
BstBAI	YACGTR	1 cut(s)	1874
BstC8I	GCNNGC	5 cut(s)	99, 158, 1531, 1535, 1671
BstDEI	CTNAG	4 cut(s)	295, 329, 719, 1509
BstDSI	CCRYGG	2 cut(s)	1119, 1223
BstF5I	GGATG	4 cut(s)	723, 1630, 1783, 2205
BstFNI	CGCG	2 cut(s)	1101, 2355
BstKTI	GATC	9 cut(s)	17, 45, 302, 328, 528, 655, 670, 2209, 2366
BstMAI	GTCTC	4 cut(s)	186, 468, 1049, 1370
BstMBI	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
BstMWI	GCNNNNNNNGC	5 cut(s)	94, 234, 1829, 1838, 1980
BstNI	CCWGG	4 cut(s)	171, 873, 888, 2150
BstNSI	RCATGY	3 cut(s)	146, 1537, 1673
BstSCI	CCNGG	4 cut(s)	169, 871, 886, 2148
BstSFI	CTRYAG	1 cut(s)	1549
BstSLI	GKGCMC	2 cut(s)	564, 1558
BstUI	CGCG	2 cut(s)	1101, 2355
BstV1I	GCAGC	5 cut(s)	113, 133, 250, 1819, 2370
BstV2I	GAAGAC	1 cut(s)	1225
BstX2I	RGATCY	4 cut(s)	14, 42, 325, 652
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	4 cut(s)	14, 42, 325, 652
BstZ17I	GTATAC	1 cut(s)	356
BsuRI	GGCC	4 cut(s)	1189, 2106, 2162, 2299
BtgI	CCRYGG	2 cut(s)	1119, 1223
BtrI	CACGTC	1 cut(s)	643
BtsCI	GGATG	4 cut(s)	723, 1630, 1783, 2205
BtsI	GCAGTG	1 cut(s)	1751
BtsIMutI	CAGTG	3 cut(s)	230, 1425, 1751
BtuMI	TCGCGA	1 cut(s)	1101
BveI	ACCTGC	1 cut(s)	573
Cac8I	GCNNGC	5 cut(s)	99, 158, 1531, 1535, 1671
CciI	TCATGA	1 cut(s)	2176
Cfr13I	GGNCC	6 cut(s)	698, 848, 1131, 1188, 2160, 2323
CsiI	ACCWGGT	1 cut(s)	871
Csp6I	GTAC	6 cut(s)	28, 992, 1007, 1283, 1400, 1880
CspCI	CAANNNNNGTGG	2 cut(s)	538, 573
CviQI	GTAC	6 cut(s)	28, 992, 1007, 1283, 1400, 1880
DdeI	CTNAG	4 cut(s)	295, 329, 719, 1509
DpnI	GATC	9 cut(s)	16, 44, 301, 327, 527, 654, 669, 2208, 2365
DpnII	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
Eam1104I	CTCTTC	2 cut(s)	1042, 2338
EarI	CTCTTC	2 cut(s)	1042, 2338
Ecl136II	GAGCTC	2 cut(s)	451, 2024
Eco130I	CCWWGG	3 cut(s)	1119, 1134, 1223
Eco24I	GRGCYC	2 cut(s)	453, 2026
Eco31I	GGTCTC	1 cut(s)	186
Eco32I	GATATC	1 cut(s)	972
Eco47I	GGWCC	4 cut(s)	698, 848, 1131, 2323
Eco53kI	GAGCTC	2 cut(s)	451, 2024
Eco57I	CTGAAG	4 cut(s)	59, 1428, 1469, 2331
Eco88I	CYCGRG	1 cut(s)	2133
EcoICRI	GAGCTC	2 cut(s)	451, 2024
EcoO109I	RGGNCCY	2 cut(s)	1131, 2323
EcoRII	CCWGG	4 cut(s)	169, 871, 886, 2148
EcoRV	GATATC	1 cut(s)	972
EcoT14I	CCWWGG	3 cut(s)	1119, 1134, 1223
EcoT22I	ATGCAT	1 cut(s)	2191
EcoT38I	GRGCYC	2 cut(s)	453, 2026
ErhI	CCWWGG	3 cut(s)	1119, 1134, 1223
Esp3I	CGTCTC	1 cut(s)	1370
FalI	AAGNNNNNCTT	4 cut(s)	81, 113, 343, 375
FaqI	GGGAC	4 cut(s)	19, 407, 761, 861
FauI	CCCGC	2 cut(s)	907, 1522
FbaI	TGATCA	1 cut(s)	525
FblI	GTMKAC	2 cut(s)	355, 604
Fnu4HI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1833, 2300, 2356, 2359
FokI	GGATG	4 cut(s)	710, 1637, 1790, 2212
FriOI	GRGCYC	2 cut(s)	453, 2026
Fsp4HI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1833, 2300, 2356, 2359
FspBI	CTAG	2 cut(s)	578, 1010
GluI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1833, 2300, 2356, 2359
GsaI	CCCAGC	3 cut(s)	189, 1541, 2173
GsuI	CTGGAG	2 cut(s)	756, 2010
HaeIII	GGCC	4 cut(s)	1189, 2106, 2162, 2299
HapII	CCGG	2 cut(s)	414, 1666
HindIII	AAGCTT	1 cut(s)	591
HinfI	GANTC	5 cut(s)	1111, 1318, 1662, 2036, 2131
HpaII	CCGG	2 cut(s)	414, 1666
HphI	GGTGA	4 cut(s)	299, 500, 798, 1462
Hpy166II	GTNNAC	8 cut(s)	177, 306, 356, 605, 1648, 1751, 1882, 2068
Hpy188I	TCNGA	9 cut(s)	19, 330, 672, 1170, 1774, 1942, 2058, 2284, 2311
Hpy8I	GTNNAC	8 cut(s)	177, 306, 356, 605, 1648, 1751, 1882, 2068
HpyAV	CCTTC	7 cut(s)	369, 717, 822, 864, 1437, 1615, 1916
HpyCH4III	ACNGT	4 cut(s)	1381, 1420, 1700, 1946
HpyCH4IV	ACGT	2 cut(s)	642, 1873
HpyF10VI	GCNNNNNNNGC	5 cut(s)	94, 234, 1829, 1838, 1980
HpyF3I	CTNAG	4 cut(s)	295, 329, 719, 1509
HpySE526I	ACGT	2 cut(s)	642, 1873
Ksp22I	TGATCA	1 cut(s)	525
Kzo9I	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
Lsp1109I	GCAGC	5 cut(s)	113, 133, 250, 1819, 2370
LweI	GCATC	7 cut(s)	732, 911, 1090, 1329, 2005, 2176, 2261
MabI	ACCWGGT	1 cut(s)	871
MaeI	CTAG	2 cut(s)	578, 1010
MaeII	ACGT	2 cut(s)	642, 1873
MaeIII	GTNAC	5 cut(s)	373, 545, 804, 1694, 2015
MalI	GATC	9 cut(s)	16, 44, 301, 327, 527, 654, 669, 2208, 2365
MbiI	CCGCTC	1 cut(s)	1529
MboI	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
MboII	GAAGA	8 cut(s)	24, 52, 158, 647, 1059, 1230, 1801, 2355
MfeI	CAATTG	3 cut(s)	407, 975, 1395
MflI	RGATCY	4 cut(s)	14, 42, 325, 652
MhlI	GDGCHC	5 cut(s)	294, 453, 564, 1558, 2026
MlyI	GAGTC	2 cut(s)	1327, 2125
MmeI	TCCRAC	1 cut(s)	2262
Mph1103I	ATGCAT	1 cut(s)	2191
MroXI	GAANNNNTTC	2 cut(s)	1327, 2316
MseI	TTAA	8 cut(s)	132, 258, 468, 482, 755, 1326, 1961, 2099
MslI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1674, 1817, 2058
MspA1I	CMGCKG	1 cut(s)	2361
MspI	CCGG	2 cut(s)	414, 1666
MspR9I	CCNGG	4 cut(s)	171, 873, 888, 2150
MunI	CAATTG	3 cut(s)	407, 975, 1395
MvaI	CCWGG	4 cut(s)	171, 873, 888, 2150
MvnI	CGCG	2 cut(s)	1101, 2355
MwoI	GCNNNNNNNGC	5 cut(s)	94, 234, 1829, 1838, 1980
NcoI	CCATGG	2 cut(s)	1119, 1223
NdeII	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
NlaIV	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1975, 2286
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	1 cut(s)	804
NruI	TCGCGA	1 cut(s)	1101
NsiI	ATGCAT	1 cut(s)	2191
NspI	RCATGY	3 cut(s)	146, 1537, 1673
PaeI	GCATGC	2 cut(s)	1537, 1673
PaeR7I	CTCGAG	1 cut(s)	2133
PagI	TCATGA	1 cut(s)	2176
PaqCI	CACCTGC	1 cut(s)	573
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PdmI	GAANNNNTTC	2 cut(s)	1327, 2316
PfeI	GAWTC	3 cut(s)	1111, 1662, 2036
PflMI	CCANNNNNTGG	1 cut(s)	857
PkrI	GCNGC	9 cut(s)	103, 127, 148, 265, 1080, 1834, 2301, 2357, 2360
PleI	GAGTC	2 cut(s)	1326, 2125
PpsI	GAGTC	2 cut(s)	1326, 2125
Ppu21I	YACGTR	1 cut(s)	1874
PpuMI	RGGWCCY	2 cut(s)	1131, 2323
PshBI	ATTAAT	1 cut(s)	1326
Psp124BI	GAGCTC	2 cut(s)	453, 2026
Psp5II	RGGWCCY	2 cut(s)	1131, 2323
Psp6I	CCWGG	4 cut(s)	169, 871, 886, 2148
PspFI	CCCAGC	3 cut(s)	185, 1537, 2169
PspGI	CCWGG	4 cut(s)	169, 871, 886, 2148
PspN4I	GGNNCC	7 cut(s)	563, 700, 801, 849, 1132, 1975, 2286
PspPI	GGNCC	6 cut(s)	698, 848, 1131, 1188, 2160, 2323
PspPPI	RGGWCCY	2 cut(s)	1131, 2323
PspXI	VCTCGAGB	1 cut(s)	2133
PsuI	RGATCY	4 cut(s)	14, 42, 325, 652
RruI	TCGCGA	1 cut(s)	1101
RsaI	GTAC	6 cut(s)	29, 993, 1008, 1284, 1401, 1881
RsaNI	GTAC	6 cut(s)	28, 992, 1007, 1283, 1400, 1880
RseI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1674, 1817, 2058
SacI	GAGCTC	2 cut(s)	453, 2026
SaqAI	TTAA	8 cut(s)	132, 258, 468, 482, 755, 1326, 1961, 2099
SatI	GCNGC	9 cut(s)	102, 126, 147, 264, 1079, 1833, 2300, 2356, 2359
Sau3AI	GATC	9 cut(s)	14, 42, 299, 325, 525, 652, 667, 2206, 2363
Sau96I	GGNCC	6 cut(s)	698, 848, 1131, 1188, 2160, 2323
SchI	GAGTC	2 cut(s)	1327, 2125
ScrFI	CCNGG	4 cut(s)	171, 873, 888, 2150
SduI	GDGCHC	5 cut(s)	294, 453, 564, 1558, 2026
SexAI	ACCWGGT	1 cut(s)	871
SfaNI	GCATC	7 cut(s)	732, 911, 1090, 1329, 2005, 2176, 2261
SfcI	CTRYAG	1 cut(s)	1549
Sfr274I	CTCGAG	1 cut(s)	2133
SinI	GGWCC	4 cut(s)	698, 848, 1131, 2323
SlaI	CTCGAG	1 cut(s)	2133
SmiMI	CAYNNNNRTG	6 cut(s)	311, 345, 458, 1674, 1817, 2058
SmlI	CTYRAG	1 cut(s)	2133
SmoI	CTYRAG	1 cut(s)	2133
SpeI	ACTAGT	1 cut(s)	1009
SphI	GCATGC	2 cut(s)	1537, 1673
SsiI	CCGC	7 cut(s)	125, 900, 1079, 1529, 2300, 2355, 2361
SspMI	CTAG	2 cut(s)	578, 1010
SstI	GAGCTC	2 cut(s)	453, 2026
StyD4I	CCNGG	4 cut(s)	169, 871, 886, 2148
StyI	CCWWGG	3 cut(s)	1119, 1134, 1223
TaaI	ACNGT	4 cut(s)	1381, 1420, 1700, 1946
TaiI	ACGT	2 cut(s)	645, 1876
TaqI	TCGA	5 cut(s)	815, 1321, 2134, 2205, 2269
TaqII	GACCGA	1 cut(s)	680
TatI	WGTACW	3 cut(s)	27, 991, 1879
TauI	GCSGC	4 cut(s)	128, 1081, 2302, 2358
TfiI	GAWTC	3 cut(s)	1111, 1662, 2036
Tru1I	TTAA	8 cut(s)	132, 258, 468, 482, 755, 1326, 1961, 2099
Tru9I	TTAA	8 cut(s)	132, 258, 468, 482, 755, 1326, 1961, 2099
TscAI	CASTG	3 cut(s)	230, 1425, 1758
TseFI	GTSAC	1 cut(s)	804
TseI	GCWGC	5 cut(s)	101, 146, 263, 1832, 2358
Tsp45I	GTSAC	1 cut(s)	804
TspDTI	ATGAA	5 cut(s)	429, 1218, 1794, 1802, 2165
TspGWI	ACGGA	5 cut(s)	783, 792, 1966, 2034, 2143
TspRI	CASTG	3 cut(s)	230, 1425, 1758
Van91I	CCANNNNNTGG	1 cut(s)	857
VpaK11BI	GGWCC	4 cut(s)	698, 848, 1131, 2323
VspI	ATTAAT	1 cut(s)	1326
XapI	RAATTY	8 cut(s)	730, 757, 922, 1068, 1781, 1888, 2030, 2043
XbaI	TCTAGA	1 cut(s)	577
XceI	RCATGY	3 cut(s)	146, 1537, 1673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	793
XhoI	CTCGAG	1 cut(s)	2133
XmiI	GTMKAC	2 cut(s)	355, 604
XmnI	GAANNNNTTC	2 cut(s)	1327, 2316
XspI	CTAG	2 cut(s)	578, 1010
Zsp2I	ATGCAT	1 cut(s)	2191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.