AT4G04900

CRIB domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
2485994 .. 2488611
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G04900.1

Sequence Viewer

Length: 471 bp
ATGTCAATGAAAATGAAGGGCATCTATAAAGGCTTCAAATGTATCTCTCAAATATTTGCCGTTGAGAAAGAGAGAGATGAAATAGAAATTGGGTTTCCAACAGATGTAAAACATGTGGCTCATATTGGCTGGGAGGGTTCATCTGGTAGTGCTCCTGGTTGGATGAGTGAGTTTAAGGTCGGGGCTGAGCTTTTATCTCCAAGACCATCATCTTTCAGTAATGCAAGACCTTCTACTTCTTTCTTCACTTCTTCTTCTTCCACTGATTTTGATCAAGGATCGAGTCAACGAGGAATATCAGATACACTACGAGATATACCTCCAGTTACTCCGATAAATTTACCGAAAAATAACAAGAAGAAAAGCAGTAGAAGAAAGAAATCTTCTTCATCATCATCATCTCCAAAATCTTCAAGATCATCTGTATTATCCAAATCTTCGTATAAATCAACTGTATCACGATTAATCTAG

Protein Analysis

156

Amino Acids

17.02

Weight (kDa)

10.09

Isoelectric Point (pI)

73.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010970)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 286
AcsI RAATTY 1 cut(s) 337
AflIII ACRYGT 1 cut(s) 112
AgsI TTSAA 2 cut(s) 37, 414
AjnI CCWGG 1 cut(s) 154
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
AluBI AGCT 1 cut(s) 190
AluI AGCT 1 cut(s) 190
Alw21I GWGCWC 1 cut(s) 154
AlwI GGATC 1 cut(s) 286
ApoI RAATTY 1 cut(s) 337
AseI ATTAAT 1 cut(s) 464
Bbv12I GWGCWC 1 cut(s) 154
BccI CCATC 1 cut(s) 214
BceAI ACGGC 1 cut(s) 44
BciT130I CCWGG 1 cut(s) 156
BclI TGATCA 1 cut(s) 271
BfaI CTAG 1 cut(s) 469
BlpI GCTNAGC 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 156
BmrFI CCNGG 1 cut(s) 156
BmsI GCATC 1 cut(s) 30
BpmI CTGGAG 1 cut(s) 306
Bpu1102I GCTNAGC 1 cut(s) 186
BsaBI GATNNNNATC 1 cut(s) 270
Bse1I ACTGG 1 cut(s) 323
Bse8I GATNNNNATC 1 cut(s) 270
BseBI CCWGG 1 cut(s) 156
BseGI GGATG 1 cut(s) 168
BseJI GATNNNNATC 1 cut(s) 270
BseMII CTCAG 1 cut(s) 177
BseNI ACTGG 1 cut(s) 323
BseYI CCCAGC 1 cut(s) 129
BsiHKAI GWGCWC 1 cut(s) 154
Bsp1286I GDGCHC 1 cut(s) 154
Bsp143I GATC 3 cut(s) 271, 278, 416
Bsp1720I GCTNAGC 1 cut(s) 186
BspCNI CTCAG 1 cut(s) 178
BspPI GGATC 1 cut(s) 286
BsrI ACTGG 1 cut(s) 323
BssMI GATC 3 cut(s) 271, 278, 416
Bst2UI CCWGG 1 cut(s) 156
Bst4CI ACNGT 1 cut(s) 454
BstDEI CTNAG 1 cut(s) 186
BstF5I GGATG 1 cut(s) 168
BstKTI GATC 3 cut(s) 274, 281, 419
BstMBI GATC 3 cut(s) 271, 278, 416
BstNI CCWGG 1 cut(s) 156
BstNSI RCATGY 1 cut(s) 116
BstSCI CCNGG 1 cut(s) 154
BtsCI GGATG 1 cut(s) 168
BtsIMutI CAGTG 1 cut(s) 261
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviAII CATG 1 cut(s) 113
CviJI RGCY 5 cut(s) 33, 119, 129, 185, 190
CviKI_1 RGCY 5 cut(s) 33, 119, 129, 185, 190
DdeI CTNAG 1 cut(s) 186
DpnI GATC 3 cut(s) 273, 280, 418
DpnII GATC 3 cut(s) 271, 278, 416
EcoRII CCWGG 1 cut(s) 154
FaeI CATG 1 cut(s) 116
FaiI YATR 5 cut(s) 27, 114, 123, 317, 444
FatI CATG 1 cut(s) 112
FbaI TGATCA 1 cut(s) 271
FokI GGATG 1 cut(s) 175
FspBI CTAG 1 cut(s) 469
GsaI CCCAGC 1 cut(s) 133
GsuI CTGGAG 1 cut(s) 306
Hin1II CATG 1 cut(s) 116
HincII GTYRAC 1 cut(s) 287
HindII GTYRAC 1 cut(s) 287
HinfI GANTC 1 cut(s) 283
Hpy166II GTNNAC 1 cut(s) 287
Hpy188I TCNGA 2 cut(s) 301, 333
Hpy188III TCNNGA 2 cut(s) 414, 459
Hpy8I GTNNAC 1 cut(s) 287
HpyAV CCTTC 2 cut(s) 10, 240
HpyCH4III ACNGT 1 cut(s) 454
HpyCH4V TGCA 1 cut(s) 224
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 1 cut(s) 116
Ksp22I TGATCA 1 cut(s) 271
Kzo9I GATC 3 cut(s) 271, 278, 416
LmnI GCTCC 1 cut(s) 157
LpnPI CCDG 5 cut(s) 115, 129, 141, 168, 336
LweI GCATC 1 cut(s) 30
MaeI CTAG 1 cut(s) 469
MaeIII GTNAC 1 cut(s) 325
MalI GATC 3 cut(s) 273, 280, 418
MboI GATC 3 cut(s) 271, 278, 416
MhlI GDGCHC 1 cut(s) 154
MluCI AATT 2 cut(s) 87, 337
MlyI GAGTC 1 cut(s) 292
MmeI TCCRAC 2 cut(s) 122, 140
MnlI CCTC 3 cut(s) 127, 284, 330
MseI TTAA 2 cut(s) 174, 464
MspR9I CCNGG 1 cut(s) 156
MvaI CCWGG 1 cut(s) 156
NdeII GATC 3 cut(s) 271, 278, 416
NlaIII CATG 1 cut(s) 116
NspI RCATGY 1 cut(s) 116
PciI ACATGT 1 cut(s) 112
PleI GAGTC 1 cut(s) 291
PpsI GAGTC 1 cut(s) 291
PscI ACATGT 1 cut(s) 112
PshBI ATTAAT 1 cut(s) 464
Psp6I CCWGG 1 cut(s) 154
PspFI CCCAGC 1 cut(s) 129
PspGI CCWGG 1 cut(s) 154
SaqAI TTAA 2 cut(s) 174, 464
Sau3AI GATC 3 cut(s) 271, 278, 416
SchI GAGTC 1 cut(s) 292
ScrFI CCNGG 1 cut(s) 156
SduI GDGCHC 1 cut(s) 154
SetI ASST 4 cut(s) 180, 192, 232, 322
SfaNI GCATC 1 cut(s) 30
Sse9I AATT 2 cut(s) 87, 337
SspI AATATT 1 cut(s) 54
SspMI CTAG 1 cut(s) 469
StyD4I CCNGG 1 cut(s) 154
TaaI ACNGT 1 cut(s) 454
TaqI TCGA 1 cut(s) 281
TasI AATT 2 cut(s) 87, 337
Tru1I TTAA 2 cut(s) 174, 464
Tru9I TTAA 2 cut(s) 174, 464
TscAI CASTG 1 cut(s) 268
TspDTI ATGAA 5 cut(s) 23, 29, 93, 129, 378
TspRI CASTG 1 cut(s) 268
VspI ATTAAT 1 cut(s) 464
XapI RAATTY 1 cut(s) 337
XceI RCATGY 1 cut(s) 116
XspI CTAG 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.