Homodimerisation domain of SGTA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08320 AT4G08320 |
| fragaria_vesca | FvH4_2g26830 FvH4_2g26840 |
| malus_domestica | MD15G1349900.v1.1 |
| prunus_persica | Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1 |
| pyrus_communis | pycom15g31300 |
| rosa_chinensis | RchiOBHm_Chr6g0295691 |
| rosa_laevigata | RLG00000011775 |
| rosa_multiflora | Rmu_sc0007372.1_g000005 Rmu_sc0012497.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00172210 |
| rosa_rugosa | Rorug06G0253300 Rorug06G0253400 |
| rosa_samantha | Rh6AG366800 Rh6BG374700 Rh6CG381000 Rh6DG367800 |
| rosa_wichuraiana | Rw6G032020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1058 |
| Acc36I | ACCTGC | 1 cut(s) | 1058 |
| Acc65I | GGTACC | 1 cut(s) | 1079 |
| AccB1I | GGYRCC | 1 cut(s) | 1079 |
| AciI | CCGC | 4 cut(s) | 524, 824, 1019, 1119 |
| AclWI | GGATC | 7 cut(s) | 275, 288, 422, 710, 815, 828, 1216 |
| AcsI | RAATTY | 1 cut(s) | 58 |
| AfaI | GTAC | 2 cut(s) | 393, 1081 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 941 |
| AflIII | ACRYGT | 3 cut(s) | 317, 669, 1111 |
| AgsI | TTSAA | 2 cut(s) | 162, 802 |
| AjnI | CCWGG | 2 cut(s) | 85, 951 |
| AleI | CACNNNNGTG | 1 cut(s) | 535 |
| AluBI | AGCT | 8 cut(s) | 137, 183, 439, 449, 519, 554, 589, 809 |
| AluI | AGCT | 8 cut(s) | 137, 183, 439, 449, 519, 554, 589, 809 |
| Alw21I | GWGCWC | 3 cut(s) | 677, 917, 1258 |
| Alw26I | GTCTC | 2 cut(s) | 310, 889 |
| Alw44I | GTGCAC | 1 cut(s) | 1254 |
| AlwI | GGATC | 7 cut(s) | 275, 288, 422, 710, 815, 828, 1216 |
| Ama87I | CYCGRG | 1 cut(s) | 1033 |
| AoxI | GGCC | 1 cut(s) | 949 |
| ApaLI | GTGCAC | 1 cut(s) | 1254 |
| ApeKI | GCWGC | 3 cut(s) | 266, 647, 650 |
| ApoI | RAATTY | 1 cut(s) | 58 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 797, 1042 |
| Asp718I | GGTACC | 1 cut(s) | 1079 |
| AspLEI | GCGC | 1 cut(s) | 382 |
| AsuC2I | CCSGG | 2 cut(s) | 1034, 1035 |
| AvaI | CYCGRG | 1 cut(s) | 1033 |
| BaeGI | GKGCMC | 1 cut(s) | 1258 |
| BamHI | GGATCC | 2 cut(s) | 280, 820 |
| BanI | GGYRCC | 1 cut(s) | 1079 |
| BauI | CACGAG | 1 cut(s) | 910 |
| BbsI | GAAGAC | 1 cut(s) | 1270 |
| Bbv12I | GWGCWC | 3 cut(s) | 677, 917, 1258 |
| BbvI | GCAGC | 3 cut(s) | 253, 634, 637 |
| BccI | CCATC | 4 cut(s) | 410, 970, 1070, 1276 |
| BciT130I | CCWGG | 2 cut(s) | 87, 953 |
| BciVI | GTATCC | 1 cut(s) | 307 |
| BcnI | CCSGG | 2 cut(s) | 1034, 1035 |
| BcoDI | GTCTC | 2 cut(s) | 310, 889 |
| BfaI | CTAG | 4 cut(s) | 117, 285, 330, 348 |
| BfuAI | ACCTGC | 1 cut(s) | 1058 |
| BfuI | GTATCC | 1 cut(s) | 307 |
| BglII | AGATCT | 1 cut(s) | 1135 |
| BisI | GCNGC | 3 cut(s) | 267, 648, 651 |
| BlpI | GCTNAGC | 1 cut(s) | 435 |
| BlsI | GCNGC | 3 cut(s) | 268, 649, 652 |
| Bme1390I | CCNGG | 4 cut(s) | 87, 953, 1034, 1035 |
| BmeT110I | CYCGRG | 1 cut(s) | 1033 |
| BmiI | GGNNCC | 3 cut(s) | 282, 822, 1081 |
| BmrFI | CCNGG | 4 cut(s) | 87, 953, 1034, 1035 |
| BmrI | ACTGGG | 1 cut(s) | 348 |
| BmsI | GCATC | 1 cut(s) | 1182 |
| BmuI | ACTGGG | 1 cut(s) | 348 |
| BpiI | GAAGAC | 1 cut(s) | 1270 |
| BpmI | CTGGAG | 2 cut(s) | 69, 461 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 435 |
| BpuEI | CTTGAG | 7 cut(s) | 128, 404, 518, 596, 750, 912, 1224 |
| BpuMI | CCSGG | 2 cut(s) | 1034, 1035 |
| BsaAI | YACGTR | 1 cut(s) | 318 |
| BsaBI | GATNNNNATC | 1 cut(s) | 426 |
| BsaJI | CCNNGG | 4 cut(s) | 309, 780, 952, 1033 |
| BsaWI | WCCGGW | 1 cut(s) | 293 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 7, 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 941 |
| Bse1I | ACTGG | 2 cut(s) | 343, 1228 |
| Bse8I | GATNNNNATC | 1 cut(s) | 426 |
| BseBI | CCWGG | 2 cut(s) | 87, 953 |
| BseDI | CCNNGG | 4 cut(s) | 309, 780, 952, 1033 |
| BseGI | GGATG | 1 cut(s) | 500 |
| BseJI | GATNNNNATC | 1 cut(s) | 426 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 941 |
| BseMII | CTCAG | 5 cut(s) | 290, 449, 690, 980, 1095 |
| BseNI | ACTGG | 2 cut(s) | 343, 1228 |
| BseRI | GAGGAG | 3 cut(s) | 15, 960, 1077 |
| BseSI | GKGCMC | 1 cut(s) | 1258 |
| BseXI | GCAGC | 3 cut(s) | 253, 634, 637 |
| BsgI | GTGCAG | 1 cut(s) | 1113 |
| BshFI | GGCC | 1 cut(s) | 951 |
| BshNI | GGYRCC | 1 cut(s) | 1079 |
| BsiHKAI | GWGCWC | 3 cut(s) | 677, 917, 1258 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1033 |
| BsiSI | CCGG | 4 cut(s) | 34, 294, 1034, 1160 |
| BslFI | GGGAC | 1 cut(s) | 355 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 941 |
| BsmAI | GTCTC | 2 cut(s) | 310, 889 |
| BsmBI | CGTCTC | 1 cut(s) | 889 |
| BsmFI | GGGAC | 1 cut(s) | 355 |
| BsnI | GGCC | 1 cut(s) | 951 |
| BsoBI | CYCGRG | 1 cut(s) | 1033 |
| Bsp1286I | GDGCHC | 3 cut(s) | 677, 917, 1258 |
| Bsp143I | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 435 |
| BspACI | CCGC | 4 cut(s) | 524, 824, 1019, 1119 |
| BspANI | GGCC | 1 cut(s) | 951 |
| BspCNI | CTCAG | 5 cut(s) | 289, 448, 689, 979, 1096 |
| BspHI | TCATGA | 2 cut(s) | 463, 1008 |
| BspLI | GGNNCC | 3 cut(s) | 282, 822, 1081 |
| BspMI | ACCTGC | 1 cut(s) | 1058 |
| BspPI | GGATC | 7 cut(s) | 275, 288, 422, 710, 815, 828, 1216 |
| BspT107I | GGYRCC | 1 cut(s) | 1079 |
| BsrI | ACTGG | 2 cut(s) | 343, 1228 |
| BssECI | CCNNGG | 4 cut(s) | 309, 780, 952, 1033 |
| BssMI | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| BssSI | CACGAG | 1 cut(s) | 910 |
| Bst2BI | CACGAG | 1 cut(s) | 910 |
| Bst2UI | CCWGG | 2 cut(s) | 87, 953 |
| Bst4CI | ACNGT | 3 cut(s) | 360, 396, 695 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 761 |
| BstBAI | YACGTR | 1 cut(s) | 318 |
| BstDEI | CTNAG | 5 cut(s) | 276, 435, 676, 966, 1104 |
| BstDSI | CCRYGG | 1 cut(s) | 309 |
| BstF5I | GGATG | 1 cut(s) | 500 |
| BstHHI | GCGC | 1 cut(s) | 382 |
| BstKTI | GATC | 8 cut(s) | 283, 430, 666, 718, 823, 1138, 1187, 1211 |
| BstMAI | GTCTC | 2 cut(s) | 310, 889 |
| BstMBI | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 761 |
| BstNI | CCWGG | 2 cut(s) | 87, 953 |
| BstNSI | RCATGY | 3 cut(s) | 673, 1006, 1115 |
| BstSCI | CCNGG | 4 cut(s) | 85, 951, 1032, 1033 |
| BstSLI | GKGCMC | 1 cut(s) | 1258 |
| BstV1I | GCAGC | 3 cut(s) | 253, 634, 637 |
| BstV2I | GAAGAC | 1 cut(s) | 1270 |
| BstX2I | RGATCY | 3 cut(s) | 280, 820, 1135 |
| BstYI | RGATCY | 3 cut(s) | 280, 820, 1135 |
| BsuI | GTATCC | 1 cut(s) | 307 |
| BsuRI | GGCC | 1 cut(s) | 951 |
| BtgI | CCRYGG | 1 cut(s) | 309 |
| BtsCI | GGATG | 1 cut(s) | 500 |
| BtsIMutI | CAGTG | 2 cut(s) | 608, 1221 |
| BveI | ACCTGC | 1 cut(s) | 1058 |
| CciI | TCATGA | 2 cut(s) | 463, 1008 |
| CfoI | GCGC | 1 cut(s) | 382 |
| Cfr9I | CCCGGG | 1 cut(s) | 1033 |
| Csp6I | GTAC | 2 cut(s) | 392, 1080 |
| CviAII | CATG | 7 cut(s) | 302, 464, 670, 1003, 1009, 1015, 1112 |
| CviQI | GTAC | 2 cut(s) | 392, 1080 |
| DdeI | CTNAG | 5 cut(s) | 276, 435, 676, 966, 1104 |
| DpnI | GATC | 8 cut(s) | 282, 429, 665, 717, 822, 1137, 1186, 1210 |
| DpnII | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| DraI | TTTAAA | 2 cut(s) | 142, 187 |
| EciI | GGCGGA | 2 cut(s) | 539, 1134 |
| Eco88I | CYCGRG | 1 cut(s) | 1033 |
| EcoRII | CCWGG | 2 cut(s) | 85, 951 |
| Esp3I | CGTCTC | 1 cut(s) | 889 |
| FaeI | CATG | 7 cut(s) | 305, 467, 673, 1006, 1012, 1018, 1115 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 90, 122, 121, 153 |
| FaqI | GGGAC | 1 cut(s) | 355 |
| FatI | CATG | 7 cut(s) | 301, 463, 669, 1002, 1008, 1014, 1111 |
| FauI | CCCGC | 1 cut(s) | 1012 |
| Fnu4HI | GCNGC | 3 cut(s) | 267, 648, 651 |
| FokI | GGATG | 1 cut(s) | 507 |
| Fsp4HI | GCNGC | 3 cut(s) | 267, 648, 651 |
| FspBI | CTAG | 4 cut(s) | 117, 285, 330, 348 |
| GlaI | GCGC | 1 cut(s) | 381 |
| GluI | GCNGC | 3 cut(s) | 267, 648, 651 |
| GsuI | CTGGAG | 2 cut(s) | 69, 461 |
| HaeIII | GGCC | 1 cut(s) | 951 |
| HapII | CCGG | 4 cut(s) | 34, 294, 1034, 1160 |
| HhaI | GCGC | 1 cut(s) | 382 |
| Hin1II | CATG | 7 cut(s) | 305, 467, 673, 1006, 1012, 1018, 1115 |
| Hin6I | GCGC | 1 cut(s) | 380 |
| HinP1I | GCGC | 1 cut(s) | 380 |
| HincII | GTYRAC | 2 cut(s) | 94, 368 |
| HindII | GTYRAC | 2 cut(s) | 94, 368 |
| HindIII | AAGCTT | 2 cut(s) | 135, 807 |
| HinfI | GANTC | 5 cut(s) | 20, 68, 155, 833, 1244 |
| HpaII | CCGG | 4 cut(s) | 34, 294, 1034, 1160 |
| Hpy166II | GTNNAC | 5 cut(s) | 94, 213, 368, 985, 1256 |
| Hpy188I | TCNGA | 4 cut(s) | 154, 501, 679, 1142 |
| Hpy8I | GTNNAC | 5 cut(s) | 94, 213, 368, 985, 1256 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4III | ACNGT | 3 cut(s) | 360, 396, 695 |
| HpyCH4IV | ACGT | 4 cut(s) | 317, 503, 898, 917 |
| HpyCH4V | TGCA | 9 cut(s) | 559, 602, 608, 639, 653, 1094, 1178, 1195, 1256 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 761 |
| HpyF3I | CTNAG | 5 cut(s) | 276, 435, 676, 966, 1104 |
| HpySE526I | ACGT | 4 cut(s) | 317, 503, 898, 917 |
| Hsp92II | CATG | 7 cut(s) | 305, 467, 673, 1006, 1012, 1018, 1115 |
| HspAI | GCGC | 1 cut(s) | 380 |
| KpnI | GGTACC | 1 cut(s) | 1083 |
| Kzo9I | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| LmnI | GCTCC | 2 cut(s) | 88, 1064 |
| Lsp1109I | GCAGC | 3 cut(s) | 253, 634, 637 |
| LweI | GCATC | 1 cut(s) | 1182 |
| MaeI | CTAG | 4 cut(s) | 117, 285, 330, 348 |
| MaeII | ACGT | 4 cut(s) | 317, 503, 898, 917 |
| MaeIII | GTNAC | 2 cut(s) | 545, 1226 |
| MalI | GATC | 8 cut(s) | 282, 429, 665, 717, 822, 1137, 1186, 1210 |
| MboI | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| MboII | GAAGA | 5 cut(s) | 110, 150, 890, 1175, 1275 |
| MfeI | CAATTG | 1 cut(s) | 603 |
| MflI | RGATCY | 3 cut(s) | 280, 820, 1135 |
| MhlI | GDGCHC | 3 cut(s) | 677, 917, 1258 |
| MluCI | AATT | 7 cut(s) | 58, 148, 205, 603, 721, 870, 1276 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 798 |
| MroXI | GAANNNNTTC | 2 cut(s) | 797, 1042 |
| MseI | TTAA | 8 cut(s) | 56, 128, 141, 147, 186, 204, 699, 1279 |
| MslI | CAYNNNNRTG | 4 cut(s) | 468, 535, 1007, 1013 |
| MspA1I | CMGCKG | 1 cut(s) | 439 |
| MspI | CCGG | 4 cut(s) | 34, 294, 1034, 1160 |
| MspR9I | CCNGG | 4 cut(s) | 87, 953, 1034, 1035 |
| MunI | CAATTG | 1 cut(s) | 603 |
| MvaI | CCWGG | 2 cut(s) | 87, 953 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 761 |
| NciI | CCSGG | 2 cut(s) | 1034, 1035 |
| NdeII | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| NlaIII | CATG | 7 cut(s) | 305, 467, 673, 1006, 1012, 1018, 1115 |
| NlaIV | GGNNCC | 3 cut(s) | 282, 822, 1081 |
| NmeAIII | GCCGAG | 1 cut(s) | 805 |
| NspI | RCATGY | 3 cut(s) | 673, 1006, 1115 |
| OliI | CACNNNNGTG | 1 cut(s) | 535 |
| PagI | TCATGA | 2 cut(s) | 463, 1008 |
| PaqCI | CACCTGC | 1 cut(s) | 1058 |
| PciI | ACATGT | 2 cut(s) | 669, 1111 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 895 |
| PdmI | GAANNNNTTC | 2 cut(s) | 797, 1042 |
| PfeI | GAWTC | 4 cut(s) | 68, 155, 833, 1244 |
| PkrI | GCNGC | 3 cut(s) | 268, 649, 652 |
| PleI | GAGTC | 1 cut(s) | 14 |
| PpsI | GAGTC | 1 cut(s) | 14 |
| Ppu21I | YACGTR | 1 cut(s) | 318 |
| PscI | ACATGT | 2 cut(s) | 669, 1111 |
| Psp6I | CCWGG | 2 cut(s) | 85, 951 |
| PspGI | CCWGG | 2 cut(s) | 85, 951 |
| PspN4I | GGNNCC | 3 cut(s) | 282, 822, 1081 |
| PsuI | RGATCY | 3 cut(s) | 280, 820, 1135 |
| PvuII | CAGCTG | 1 cut(s) | 439 |
| RsaI | GTAC | 2 cut(s) | 393, 1081 |
| RsaNI | GTAC | 2 cut(s) | 392, 1080 |
| RseI | CAYNNNNRTG | 4 cut(s) | 468, 535, 1007, 1013 |
| SaqAI | TTAA | 8 cut(s) | 56, 128, 141, 147, 186, 204, 699, 1279 |
| SatI | GCNGC | 3 cut(s) | 267, 648, 651 |
| Sau3AI | GATC | 8 cut(s) | 280, 427, 663, 715, 820, 1135, 1184, 1208 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 4 cut(s) | 87, 953, 1034, 1035 |
| SduI | GDGCHC | 3 cut(s) | 677, 917, 1258 |
| SfaNI | GCATC | 1 cut(s) | 1182 |
| SmaI | CCCGGG | 1 cut(s) | 1035 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 468, 535, 1007, 1013 |
| SmlI | CTYRAG | 7 cut(s) | 107, 383, 533, 575, 765, 927, 1239 |
| SmoI | CTYRAG | 7 cut(s) | 107, 383, 533, 575, 765, 927, 1239 |
| Sse9I | AATT | 7 cut(s) | 58, 148, 205, 603, 721, 870, 1276 |
| SsiI | CCGC | 4 cut(s) | 524, 824, 1019, 1119 |
| SspMI | CTAG | 4 cut(s) | 117, 285, 330, 348 |
| StyD4I | CCNGG | 4 cut(s) | 85, 951, 1032, 1033 |
| TaaI | ACNGT | 3 cut(s) | 360, 396, 695 |
| TaiI | ACGT | 4 cut(s) | 320, 506, 901, 920 |
| TaqI | TCGA | 2 cut(s) | 585, 789 |
| TasI | AATT | 7 cut(s) | 58, 148, 205, 603, 721, 870, 1276 |
| TfiI | GAWTC | 4 cut(s) | 68, 155, 833, 1244 |
| Tru1I | TTAA | 8 cut(s) | 56, 128, 141, 147, 186, 204, 699, 1279 |
| Tru9I | TTAA | 8 cut(s) | 56, 128, 141, 147, 186, 204, 699, 1279 |
| TscAI | CASTG | 2 cut(s) | 615, 1228 |
| TseI | GCWGC | 3 cut(s) | 266, 647, 650 |
| TspDTI | ATGAA | 7 cut(s) | 207, 246, 369, 452, 492, 997, 1025 |
| TspGWI | ACGGA | 4 cut(s) | 35, 61, 298, 629 |
| TspMI | CCCGGG | 1 cut(s) | 1033 |
| TspRI | CASTG | 2 cut(s) | 615, 1228 |
| VneI | GTGCAC | 1 cut(s) | 1254 |
| XapI | RAATTY | 1 cut(s) | 58 |
| XbaI | TCTAGA | 1 cut(s) | 347 |
| XceI | RCATGY | 3 cut(s) | 673, 1006, 1115 |
| XmaI | CCCGGG | 1 cut(s) | 1033 |
| XmnI | GAANNNNTTC | 2 cut(s) | 797, 1042 |
| XspI | CTAG | 4 cut(s) | 117, 285, 330, 348 |