Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0010162

Physical Location & Seq

Genomic Coordinates Forward (+)

56400901 .. 56405960

Gene Structure 5060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG367800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGGCTCCGCCGCTCAACACCGATTCTCCCCTCTCTCGCCGCATCGTCCGCTCCTTCCTGGATTTCCTCAGCTCCGTTGAACCGGGTCCTGGTGTTAATGTTGAGGGTATTGAGATTGCAAGGGAATGTCTGGAGGAGGCTTTCAGGCTTAATACCTCTCCTGCTGATGATCCGATTAAACCCGAGTCGTTAGTCGAAATGTTTAGCTCACTAGGAAGCAACAAGCTTCCGGAGAATGTATCATCCTGTCATGGTCAGGGATCAGTCCCAGCTCCTAGTTCATCAGCTGGTCAGGATGCCGCGGCTGCCAATCTTTCAGACGCATCAAAATCTCTGGGTCAGGATTCGACAAGTAAAAACCATGAACTAGGGGAGTCAAAAGATGCTCTGTTTGGGCAATTCTTTTCTGCACTTGAGAGAACTAGTTACTTTATGCCCTTGCCTGATGGTAGTGATGATCCAGTGAGATTAGAGAAAGCAACTCAATTTTTCCATGACGCTTTAAATGAGATGGAAACATCTGGATGTGAGGAATTCAGTCCTAAATACTTGGCTGAGACGTTGAAATCACAAGGTAATAGGGCCATGCAATCGAAGCTGTATACCAAGGCAATTGAGTTGTATGACTGTGCTATTGCACTTTGTGAAAATAATGCTGTTTACCGCTGTAACAGGGCGGCTGCTTACACTCAGATACACAAATATGCTGAAGCAGTCAGAGATTGCCTTAAATCTATAGAGATCGACCCGAACTATAGCAAGGCATACAGTCGTCTGGGATTAGCTTATTATGCAGTAGGGAACTACCGTGAGGCTATTGATAAGGGATTTAAGAAAGCCTTGCAACTGGATCCAAATAATGAAGCTATCAAAGAAAATATTCGGGTGGCTGAGCTGAAATTGATAGAGCAGCAACAACGATCAGGATCTCATCAGAACACAAGTTCATTTTCGTTTAGTAGTAGCAACGGTTCGGCTTCAGAACACCACAACCAATCTACAGGTGGGTCAAGCCAGGGTGCACCACCTCTGTTTGGTTCTATGCCATTCAATGCAGGTTCTGGTCCTGCTGATTTTGCAAATATGTTTATGAACATGGCTGCAAATGCATACCAAGGACAGCATTCTCAAGATAGCCAAGGTGATGACCGTAGCAGCAATGTTAATGGAGTCGATGAACCGGAAATAAGCGTTGACGGCAACATAAATGTTAATTTTGGAGAAATGCCTGCGGAGCTATCTGGAGCTTTGAGATCTGTGATGCAGATGTTTTCTGGGGCAACATCACAGGGAAATTCGCAGGATACTCCAAATGAAGGACCAAGACCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006996 GO:0007029 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010605 GO:0016043 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032434 GO:0032435 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0036503 GO:0042176 GO:0042177 GO:0042221 GO:0043161 GO:0043170 GO:0043621 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045048 GO:0045184 GO:0045861 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051179 GO:0051205 GO:0051234 GO:0051246 GO:0051248 GO:0051603 GO:0051641 GO:0051716 GO:0060255 GO:0061024 GO:0061136 GO:0065007 GO:0070727 GO:0071704 GO:0071816 GO:0071840 GO:0072657 GO:0080090 GO:0080134 GO:0080135 GO:0090150 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1903050 GO:1903051 GO:1903069 GO:1903070 GO:1903362 GO:1903363 GO:1903573 GO:1904292 GO:1904293 GO:1905897 GO:2000058 GO:2000059

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SGTA_dimer TPR_1 TPR_11 TPR_17 TPR_2

Protein Analysis

444

Amino Acids

47.9

Weight (kDa)

4.81

Isoelectric Point (pI)

51.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	222 - 252	1.4e-06	Tetratricopeptide repeat
TPR_17	PF13431	242 - 273	7.9e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08320 AT4G08320
fragaria_vesca	FvH4_2g26830 FvH4_2g26840
malus_domestica	MD15G1349900.v1.1
prunus_persica	Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1
pyrus_communis	pycom15g31300
rosa_chinensis	RchiOBHm_Chr6g0295691
rosa_laevigata	RLG00000011775
rosa_multiflora	Rmu_sc0007372.1_g000005 Rmu_sc0012497.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172210
rosa_rugosa	Rorug06G0253300 Rorug06G0253400
rosa_samantha	Rh6AG366800 Rh6BG374700 Rh6CG381000 Rh6DG367800
rosa_wichuraiana	Rw6G032020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1046
AccBSI	CCGCTC	2 cut(s)	13, 51
AccI	GTMKAC	1 cut(s)	602
AccII	CGCG	1 cut(s)	302
AccIII	TCCGGA	1 cut(s)	229
AciI	CCGC	9 cut(s)	8, 11, 40, 49, 300, 302, 664, 677, 1232
AclWI	GGATC	6 cut(s)	164, 268, 452, 845, 858, 934
AcsI	RAATTY	2 cut(s)	533, 1294
AcuI	CTGAAG	2 cut(s)	729, 963
AdeI	CACNNNGTG	1 cut(s)	644
AfiI	CCNNNNNNNGG	3 cut(s)	89, 1034, 1316
AgsI	TTSAA	3 cut(s)	80, 565, 1051
AhlI	ACTAGT	1 cut(s)	422
AjnI	CCWGG	3 cut(s)	57, 88, 1014
Alw21I	GWGCWC	1 cut(s)	1024
Alw26I	GTCTC	1 cut(s)	551
Alw44I	GTGCAC	1 cut(s)	1020
AlwI	GGATC	6 cut(s)	164, 268, 452, 845, 858, 934
AlwNI	CAGNNNCTG	1 cut(s)	1061
Ama87I	CYCGRG	1 cut(s)	182
Aor13HI	TCCGGA	1 cut(s)	229
AoxI	GGCC	1 cut(s)	582
ApaLI	GTGCAC	1 cut(s)	1020
ApeKI	GCWGC	5 cut(s)	305, 680, 910, 1100, 1155
ApoI	RAATTY	2 cut(s)	533, 1294
Asp700I	GAANNNNTTC	1 cut(s)	879
AspS9I	GGNCC	4 cut(s)	86, 582, 1064, 1319
AsuC2I	CCSGG	1 cut(s)	84
AsuHPI	GGTGA	1 cut(s)	1154
AvaI	CYCGRG	1 cut(s)	182
AvaII	GGWCC	3 cut(s)	86, 1064, 1319
BaeGI	GKGCMC	1 cut(s)	1024
BamHI	GGATCC	1 cut(s)	850
Bbv12I	GWGCWC	1 cut(s)	1024
BbvCI	CCTCAGC	1 cut(s)	68
BbvI	GCAGC	5 cut(s)	292, 667, 922, 1087, 1167
BccI	CCATC	2 cut(s)	440, 505
BceAI	ACGGC	1 cut(s)	1213
BciT130I	CCWGG	3 cut(s)	59, 90, 1016
BciVI	GTATCC	1 cut(s)	1297
BcnI	CCSGG	1 cut(s)	84
BcoDI	GTCTC	1 cut(s)	551
BcuI	ACTAGT	1 cut(s)	422
BfaI	CTAG	4 cut(s)	212, 276, 368, 423
BfmI	CTRYAG	3 cut(s)	735, 754, 999
BfuAI	ACCTGC	1 cut(s)	1046
BfuI	GTATCC	1 cut(s)	1297
BglII	AGATCT	1 cut(s)	1253
BlpI	GCTNAGC	1 cut(s)	891
Bme1390I	CCNGG	4 cut(s)	59, 84, 90, 1016
Bme18I	GGWCC	3 cut(s)	86, 1064, 1319
BmeT110I	CYCGRG	1 cut(s)	182
BmgT120I	GGNCC	4 cut(s)	86, 582, 1064, 1319
BmiI	GGNNCC	3 cut(s)	6, 87, 852
BmrFI	CCNGG	4 cut(s)	59, 84, 90, 1016
BmsI	GCATC	5 cut(s)	51, 286, 332, 373, 1251
BpmI	CTGGAG	2 cut(s)	152, 1263
Bpu10I	CCTNAGC	1 cut(s)	68
Bpu1102I	GCTNAGC	1 cut(s)	891
BpuEI	CTTGAG	2 cut(s)	434, 1113
BpuMI	CCSGG	1 cut(s)	84
BsaBI	GATNNNNATC	1 cut(s)	925
BsaJI	CCNNGG	5 cut(s)	300, 606, 1015, 1114, 1138
BsaWI	WCCGGW	2 cut(s)	229, 1180
BsaXI	ACNNNNNCTCC	2 cut(s)	10, 40
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 1034, 1316
Bse1I	ACTGG	2 cut(s)	461, 852
Bse3DI	GCAATG	1 cut(s)	1165
Bse8I	GATNNNNATC	1 cut(s)	925
BseAI	TCCGGA	1 cut(s)	229
BseBI	CCWGG	3 cut(s)	59, 90, 1016
BseDI	CCNNGG	5 cut(s)	300, 606, 1015, 1114, 1138
BseGI	GGATG	3 cut(s)	242, 301, 530
BseJI	GATNNNNATC	1 cut(s)	925
BseLI	CCNNNNNNNGG	3 cut(s)	89, 1034, 1316
BseMI	GCAATG	1 cut(s)	1165
BseMII	CTCAG	4 cut(s)	82, 546, 704, 882
BseNI	ACTGG	2 cut(s)	461, 852
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	1024
BseXI	GCAGC	5 cut(s)	292, 667, 922, 1087, 1167
BseYI	CCCAGC	1 cut(s)	268
BsgI	GTGCAG	1 cut(s)	393
Bsh1236I	CGCG	1 cut(s)	302
BshFI	GGCC	1 cut(s)	584
BsiHKAI	GWGCWC	1 cut(s)	1024
BsiHKCI	CYCGRG	1 cut(s)	182
BsiSI	CCGG	3 cut(s)	83, 230, 1181
BslFI	GGGAC	1 cut(s)	251
BslI	CCNNNNNNNGG	3 cut(s)	89, 1034, 1316
BsmAI	GTCTC	1 cut(s)	551
BsmBI	CGTCTC	1 cut(s)	551
BsmFI	GGGAC	1 cut(s)	251
BsmI	GAATGC	1 cut(s)	1123
BsnI	GGCC	1 cut(s)	584
BsoBI	CYCGRG	1 cut(s)	182
Bsp1286I	GDGCHC	1 cut(s)	1024
Bsp13I	TCCGGA	1 cut(s)	229
Bsp143I	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
Bsp1720I	GCTNAGC	1 cut(s)	891
BspACI	CCGC	9 cut(s)	8, 11, 40, 49, 300, 302, 664, 677, 1232
BspANI	GGCC	1 cut(s)	584
BspCNI	CTCAG	4 cut(s)	81, 547, 703, 883
BspEI	TCCGGA	1 cut(s)	229
BspFNI	CGCG	1 cut(s)	302
BspLI	GGNNCC	3 cut(s)	6, 87, 852
BspMI	ACCTGC	1 cut(s)	1046
BspPI	GGATC	6 cut(s)	164, 268, 452, 845, 858, 934
BsrBI	CCGCTC	2 cut(s)	13, 51
BsrDI	GCAATG	1 cut(s)	1165
BsrI	ACTGG	2 cut(s)	461, 852
BssECI	CCNNGG	5 cut(s)	300, 606, 1015, 1114, 1138
BssMI	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
BssNAI	GTATAC	1 cut(s)	603
BssT1I	CCWWGG	3 cut(s)	606, 1114, 1138
Bst1107I	GTATAC	1 cut(s)	603
Bst2UI	CCWGG	3 cut(s)	59, 90, 1016
Bst4CI	ACNGT	5 cut(s)	629, 770, 809, 971, 1151
BstC8I	GCNNGC	1 cut(s)	1230
BstDEI	CTNAG	4 cut(s)	68, 555, 690, 891
BstDSI	CCRYGG	1 cut(s)	300
BstF5I	GGATG	3 cut(s)	242, 301, 530
BstFNI	CGCG	1 cut(s)	302
BstKTI	GATC	8 cut(s)	172, 263, 460, 744, 853, 923, 929, 1256
BstMAI	GTCTC	1 cut(s)	551
BstMBI	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
BstMWI	GCNNNNNNNGC	8 cut(s)	48, 305, 595, 791, 1076, 1106, 1197, 1234
BstNI	CCWGG	3 cut(s)	59, 90, 1016
BstSCI	CCNGG	4 cut(s)	57, 82, 88, 1014
BstSFI	CTRYAG	3 cut(s)	735, 754, 999
BstSLI	GKGCMC	1 cut(s)	1024
BstUI	CGCG	1 cut(s)	302
BstV1I	GCAGC	5 cut(s)	292, 667, 922, 1087, 1167
BstX2I	RGATCY	3 cut(s)	850, 926, 1253
BstYI	RGATCY	3 cut(s)	850, 926, 1253
BstZ17I	GTATAC	1 cut(s)	603
BsuI	GTATCC	1 cut(s)	1297
BsuRI	GGCC	1 cut(s)	584
BtgI	CCRYGG	1 cut(s)	300
BtsCI	GGATG	3 cut(s)	242, 301, 530
BtsIMutI	CAGTG	1 cut(s)	468
BveI	ACCTGC	1 cut(s)	1046
Cac8I	GCNNGC	1 cut(s)	1230
CaiI	CAGNNNCTG	1 cut(s)	1061
Cfr13I	GGNCC	4 cut(s)	86, 582, 1064, 1319
Cfr42I	CCGCGG	1 cut(s)	303
CseI	GACGC	2 cut(s)	329, 506
CviAII	CATG	5 cut(s)	251, 362, 494, 586, 1096
DdeI	CTNAG	4 cut(s)	68, 555, 690, 891
DpnI	GATC	8 cut(s)	171, 262, 459, 743, 852, 922, 928, 1255
DpnII	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
DraI	TTTAAA	1 cut(s)	504
DraIII	CACNNNGTG	1 cut(s)	644
Eco130I	CCWWGG	3 cut(s)	606, 1114, 1138
Eco47I	GGWCC	3 cut(s)	86, 1064, 1319
Eco57I	CTGAAG	2 cut(s)	729, 963
Eco88I	CYCGRG	1 cut(s)	182
EcoO109I	RGGNCCY	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	533
EcoRII	CCWGG	3 cut(s)	57, 88, 1014
EcoT14I	CCWWGG	3 cut(s)	606, 1114, 1138
EcoT22I	ATGCAT	1 cut(s)	1111
ErhI	CCWWGG	3 cut(s)	606, 1114, 1138
Esp3I	CGTCTC	1 cut(s)	551
FaeI	CATG	5 cut(s)	254, 365, 497, 589, 1099
FalI	AAGNNNNNCTT	2 cut(s)	824, 856
FaqI	GGGAC	1 cut(s)	251
FatI	CATG	5 cut(s)	250, 361, 493, 585, 1095
FblI	GTMKAC	1 cut(s)	602
FokI	GGATG	3 cut(s)	229, 308, 537
FspBI	CTAG	4 cut(s)	212, 276, 368, 423
GsaI	CCCAGC	1 cut(s)	272
GsuI	CTGGAG	2 cut(s)	152, 1263
HaeIII	GGCC	1 cut(s)	584
HapII	CCGG	3 cut(s)	83, 230, 1181
HgaI	GACGC	2 cut(s)	329, 506
Hin1II	CATG	5 cut(s)	254, 365, 497, 589, 1099
HincII	GTYRAC	1 cut(s)	1195
HindII	GTYRAC	1 cut(s)	1195
HindIII	AAGCTT	1 cut(s)	224
HinfI	GANTC	5 cut(s)	23, 185, 344, 374, 1170
HpaII	CCGG	3 cut(s)	83, 230, 1181
HphI	GGTGA	1 cut(s)	1154
Hpy166II	GTNNAC	4 cut(s)	603, 661, 1022, 1195
Hpy188I	TCNGA	6 cut(s)	174, 319, 693, 719, 936, 982
Hpy188III	TCNNGA	8 cut(s)	131, 230, 293, 341, 522, 924, 1130, 1242
Hpy8I	GTNNAC	4 cut(s)	603, 661, 1022, 1195
HpyAV	CCTTC	2 cut(s)	64, 1310
HpyCH4III	ACNGT	5 cut(s)	629, 770, 809, 971, 1151
HpyCH4IV	ACGT	1 cut(s)	560
HpyF10VI	GCNNNNNNNGC	8 cut(s)	48, 305, 595, 791, 1076, 1106, 1197, 1234
HpyF3I	CTNAG	4 cut(s)	68, 555, 690, 891
HpySE526I	ACGT	1 cut(s)	560
Hsp92II	CATG	5 cut(s)	254, 365, 497, 589, 1099
Kpn2I	TCCGGA	1 cut(s)	229
KspI	CCGCGG	1 cut(s)	303
Kzo9I	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
LmnI	GCTCC	6 cut(s)	10, 56, 77, 277, 1234, 1244
Lsp1109I	GCAGC	5 cut(s)	292, 667, 922, 1087, 1167
LweI	GCATC	5 cut(s)	51, 286, 332, 373, 1251
MaeI	CTAG	4 cut(s)	212, 276, 368, 423
MaeII	ACGT	1 cut(s)	560
MaeIII	GTNAC	2 cut(s)	425, 668
MalI	GATC	8 cut(s)	171, 262, 459, 743, 852, 922, 928, 1255
MbiI	CCGCTC	2 cut(s)	13, 51
MboI	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
MfeI	CAATTG	1 cut(s)	612
MflI	RGATCY	3 cut(s)	850, 926, 1253
MhlI	GDGCHC	1 cut(s)	1024
MluCI	AATT	7 cut(s)	398, 485, 533, 612, 899, 1213, 1294
MlyI	GAGTC	3 cut(s)	194, 383, 1179
MnlI	CCTC	9 cut(s)	41, 77, 97, 127, 130, 166, 523, 805, 1038
Mph1103I	ATGCAT	1 cut(s)	1111
MroI	TCCGGA	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	879
MseI	TTAA	8 cut(s)	96, 150, 177, 503, 729, 831, 1164, 1212
MslI	CAYNNNNRTG	2 cut(s)	523, 702
MspA1I	CMGCKG	3 cut(s)	287, 302, 666
MspI	CCGG	3 cut(s)	83, 230, 1181
MspR9I	CCNGG	4 cut(s)	59, 84, 90, 1016
MunI	CAATTG	1 cut(s)	612
Mva1269I	GAATGC	1 cut(s)	1123
MvaI	CCWGG	3 cut(s)	59, 90, 1016
MvnI	CGCG	1 cut(s)	302
MwoI	GCNNNNNNNGC	8 cut(s)	48, 305, 595, 791, 1076, 1106, 1197, 1234
NciI	CCSGG	1 cut(s)	84
NdeII	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
NlaIII	CATG	5 cut(s)	254, 365, 497, 589, 1099
NlaIV	GGNNCC	3 cut(s)	6, 87, 852
NsiI	ATGCAT	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	1123
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	2 cut(s)	23, 344
PfoI	TCCNGGA	1 cut(s)	57
PleI	GAGTC	3 cut(s)	193, 382, 1178
PpsI	GAGTC	3 cut(s)	193, 382, 1178
PpuMI	RGGWCCY	1 cut(s)	86
Psp5II	RGGWCCY	1 cut(s)	86
Psp6I	CCWGG	3 cut(s)	57, 88, 1014
PspFI	CCCAGC	1 cut(s)	268
PspGI	CCWGG	3 cut(s)	57, 88, 1014
PspN4I	GGNNCC	3 cut(s)	6, 87, 852
PspPI	GGNCC	4 cut(s)	86, 582, 1064, 1319
PspPPI	RGGWCCY	1 cut(s)	86
PsrI	GAACNNNNNNTAC	2 cut(s)	955, 987
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	3 cut(s)	850, 926, 1253
PvuII	CAGCTG	1 cut(s)	287
RseI	CAYNNNNRTG	2 cut(s)	523, 702
SacII	CCGCGG	1 cut(s)	303
SaqAI	TTAA	8 cut(s)	96, 150, 177, 503, 729, 831, 1164, 1212
Sau3AI	GATC	8 cut(s)	169, 260, 457, 741, 850, 920, 926, 1253
Sau96I	GGNCC	4 cut(s)	86, 582, 1064, 1319
SchI	GAGTC	3 cut(s)	194, 383, 1179
ScrFI	CCNGG	4 cut(s)	59, 84, 90, 1016
SduI	GDGCHC	1 cut(s)	1024
SfaNI	GCATC	5 cut(s)	51, 286, 332, 373, 1251
SfcI	CTRYAG	3 cut(s)	735, 754, 999
Sfr303I	CCGCGG	1 cut(s)	303
SgrBI	CCGCGG	1 cut(s)	303
SinI	GGWCC	3 cut(s)	86, 1064, 1319
SmiMI	CAYNNNNRTG	2 cut(s)	523, 702
SmlI	CTYRAG	2 cut(s)	413, 1128
SmoI	CTYRAG	2 cut(s)	413, 1128
SpeI	ACTAGT	1 cut(s)	422
Sse9I	AATT	7 cut(s)	398, 485, 533, 612, 899, 1213, 1294
SsiI	CCGC	9 cut(s)	8, 11, 40, 49, 300, 302, 664, 677, 1232
SspI	AATATT	1 cut(s)	880
SspMI	CTAG	4 cut(s)	212, 276, 368, 423
StyD4I	CCNGG	4 cut(s)	57, 82, 88, 1014
StyI	CCWWGG	3 cut(s)	606, 1114, 1138
TaaI	ACNGT	5 cut(s)	629, 770, 809, 971, 1151
TaiI	ACGT	1 cut(s)	563
TaqI	TCGA	5 cut(s)	195, 347, 593, 744, 1173
TasI	AATT	7 cut(s)	398, 485, 533, 612, 899, 1213, 1294
TauI	GCSGC	5 cut(s)	13, 42, 302, 305, 680
TfiI	GAWTC	2 cut(s)	23, 344
Tru1I	TTAA	8 cut(s)	96, 150, 177, 503, 729, 831, 1164, 1212
Tru9I	TTAA	8 cut(s)	96, 150, 177, 503, 729, 831, 1164, 1212
TscAI	CASTG	1 cut(s)	468
TseI	GCWGC	5 cut(s)	305, 680, 910, 1100, 1155
TspDTI	ATGAA	7 cut(s)	270, 378, 876, 936, 1106, 1191, 1329
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	1 cut(s)	468
VneI	GTGCAC	1 cut(s)	1020
VpaK11BI	GGWCC	3 cut(s)	86, 1064, 1319
XapI	RAATTY	2 cut(s)	533, 1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1001
XmiI	GTMKAC	1 cut(s)	602
XmnI	GAANNNNTTC	1 cut(s)	879
XspI	CTAG	4 cut(s)	212, 276, 368, 423
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.