Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0010162

Physical Location & Seq

Genomic Coordinates Forward (+)

56719972 .. 56725472

Gene Structure 5501 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG381000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGCTCCGCCGCTCAACACCGATTCTCCCATCTCTCGCCGCATCGTCCGCTCGTTCCTGGATTTCCTCAGCTCCGTTGAACCAGGTCCTGGTGTTAATGTTGAGGGTATTGAGATTGCAAGGGAATGTCTGGAGGAGGCTTTCAAGCTCAATACCTCTCCCGCTGATGATCCGATTAAACCCGAGTCGTTAGTTGAAATGTTTAGCTCACTAGGAAGCAACAAGCTTCCGGAGAATGTATCCTGTCATGGTCAGGGATCAGTTCCAGCTCCTAGTTCATCAGCTGGTCAGGATACCGCGGCTGCCAATCTTTCAGAGGCATCAAAATCTCTGGGTCAGGATTTGACGAGTAAAAACCATGAACTAGGGGAGTCAAAAGATGCTCTGTTTGGGCAATTCTTTTCTGCACTTGAGAGAACTAGTTACTTTATGCCCTTGCCTGATGGTAGTGATGATCCAGTGAGATTAGAGAAAGCAACTCAATTTTTCCATGACGCTTTAAATGAGATGGAAAGATCTGGATGTGAGGAATTCAGTCCTAAATACTTGGCTGAGACGTTGAAATCACAAGGTAATAGGGCCATGCAATCGAAGCTGTATACCAAGGCAATTGAGTTGTATGACTGTGCTATTGCACTTTGTGAAAATAATGCTGTTTACCGCTGTAACAGGGCGGCTGCTTACACTCAGATACACAAATATGCTGAAGCAGTCAGAGATTGCCTTCAATCTATAGAGATCGACCCAAACTATAGCAAGGCATACAGTCGTCTGGGATTAGCTTATTATGCAGTAGGGAACTACCGTGAGGCTATTGATAAGGGATTTAAGAAAGCCCTGCAACTGGATCCAAATAATGAAGCTATCAAAGAAAATATTCGGGTGGCTGAGCTGAAATTGATAGAGCAGCAACAACGATCAGGATCTCATCAGAACACAAGTTCATTTTCGTTTAGTAGTAGCAACGGTTCGGCTTCAGAACACCACAACCAATCTACAGGTGGGTCAAGTCAGGGTGCACCACCTCTGTTTGGTTCTATGCCATTCAATGCAGGTTCTGGTCCTGCTGATTTTGCAAATATGTTTATGAACATGGCTGCAAATGCATACCAAGGACAGCATTCTCAAGATAGCCAAGGTGATGACCATAGCAGCAATGTTAATGGTGTTGATGAACCGGAAATAATGGTTGACGGCAACATAAATGTTAATTTTGGAGAAATGCCTGCGGAGCTATCAGGAGCTTTGAGATCTGTGATGCAGATGTTTTCTGGGGCAACATCACAGGGAAATTCGCAGGATACTCCAAATGAAGGACCAAGACCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006996 GO:0007029 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010605 GO:0016043 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032434 GO:0032435 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0036503 GO:0042176 GO:0042177 GO:0042221 GO:0043161 GO:0043170 GO:0043621 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045048 GO:0045184 GO:0045861 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051179 GO:0051205 GO:0051234 GO:0051246 GO:0051248 GO:0051603 GO:0051641 GO:0051716 GO:0060255 GO:0061024 GO:0061136 GO:0065007 GO:0070727 GO:0071704 GO:0071816 GO:0071840 GO:0072657 GO:0080090 GO:0080134 GO:0080135 GO:0090150 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1903050 GO:1903051 GO:1903069 GO:1903070 GO:1903362 GO:1903363 GO:1903573 GO:1904292 GO:1904293 GO:1905897 GO:2000058 GO:2000059

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SGTA_dimer TPR_1 TPR_11 TPR_17 TPR_2

Protein Analysis

443

Amino Acids

47.94

Weight (kDa)

4.82

Isoelectric Point (pI)

52.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	221 - 251	3.2e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08320 AT4G08320
fragaria_vesca	FvH4_2g26830 FvH4_2g26840
malus_domestica	MD15G1349900.v1.1
prunus_persica	Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1 Prupe.1G499100_v2.0.a1
pyrus_communis	pycom15g31300
rosa_chinensis	RchiOBHm_Chr6g0295691
rosa_laevigata	RLG00000011775
rosa_multiflora	Rmu_sc0007372.1_g000005 Rmu_sc0012497.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172210
rosa_rugosa	Rorug06G0253300 Rorug06G0253400
rosa_samantha	Rh6AG366800 Rh6BG374700 Rh6CG381000 Rh6DG367800
rosa_wichuraiana	Rw6G032020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1043
AccB7I	CCANNNNNTGG	1 cut(s)	89
AccBSI	CCGCTC	2 cut(s)	13, 51
AccI	GTMKAC	1 cut(s)	599
AccII	CGCG	1 cut(s)	299
AccIII	TCCGGA	1 cut(s)	229
AclWI	GGATC	6 cut(s)	164, 265, 449, 842, 855, 931
AcsI	RAATTY	2 cut(s)	530, 1291
AcuI	CTGAAG	2 cut(s)	726, 960
AdeI	CACNNNGTG	1 cut(s)	641
AfiI	CCNNNNNNNGG	4 cut(s)	89, 844, 1031, 1313
AgsI	TTSAA	6 cut(s)	80, 145, 197, 562, 728, 1048
AhlI	ACTAGT	1 cut(s)	419
AjnI	CCWGG	3 cut(s)	57, 82, 88
Alw21I	GWGCWC	1 cut(s)	1021
Alw26I	GTCTC	1 cut(s)	548
Alw44I	GTGCAC	1 cut(s)	1017
AlwI	GGATC	6 cut(s)	164, 265, 449, 842, 855, 931
AlwNI	CAGNNNCTG	2 cut(s)	89, 1058
Ama87I	CYCGRG	1 cut(s)	182
Aor13HI	TCCGGA	1 cut(s)	229
AoxI	GGCC	1 cut(s)	579
ApaLI	GTGCAC	1 cut(s)	1017
ApeKI	GCWGC	5 cut(s)	302, 677, 907, 1097, 1152
ApoI	RAATTY	2 cut(s)	530, 1291
Asp700I	GAANNNNTTC	1 cut(s)	876
AspS9I	GGNCC	4 cut(s)	86, 579, 1061, 1316
AsuHPI	GGTGA	1 cut(s)	1151
AvaI	CYCGRG	1 cut(s)	182
AvaII	GGWCC	3 cut(s)	86, 1061, 1316
BaeGI	GKGCMC	1 cut(s)	1021
BamHI	GGATCC	1 cut(s)	847
Bbv12I	GWGCWC	1 cut(s)	1021
BbvCI	CCTCAGC	1 cut(s)	68
BbvI	GCAGC	5 cut(s)	289, 664, 919, 1084, 1164
BccI	CCATC	3 cut(s)	38, 437, 502
BceAI	ACGGC	1 cut(s)	1210
BciT130I	CCWGG	3 cut(s)	59, 84, 90
BciVI	GTATCC	3 cut(s)	250, 286, 1294
BcoDI	GTCTC	1 cut(s)	548
BcuI	ACTAGT	1 cut(s)	419
BfaI	CTAG	4 cut(s)	212, 273, 365, 420
BfmI	CTRYAG	3 cut(s)	732, 751, 996
BfuAI	ACCTGC	1 cut(s)	1043
BfuI	GTATCC	3 cut(s)	250, 286, 1294
BglII	AGATCT	2 cut(s)	515, 1250
BisI	GCNGC	9 cut(s)	11, 40, 300, 303, 675, 678, 908, 1098, 1153
BlpI	GCTNAGC	1 cut(s)	888
BlsI	GCNGC	9 cut(s)	12, 41, 301, 304, 676, 679, 909, 1099, 1154
Bme1390I	CCNGG	3 cut(s)	59, 84, 90
Bme18I	GGWCC	3 cut(s)	86, 1061, 1316
BmeT110I	CYCGRG	1 cut(s)	182
BmgT120I	GGNCC	4 cut(s)	86, 579, 1061, 1316
BmiI	GGNNCC	2 cut(s)	6, 849
BmrFI	CCNGG	3 cut(s)	59, 84, 90
BmsI	GCATC	4 cut(s)	51, 329, 370, 1248
BpmI	CTGGAG	1 cut(s)	152
Bpu10I	CCTNAGC	1 cut(s)	68
Bpu1102I	GCTNAGC	1 cut(s)	888
BpuEI	CTTGAG	2 cut(s)	431, 1110
BsaBI	GATNNNNATC	1 cut(s)	922
BsaJI	CCNNGG	4 cut(s)	297, 603, 1111, 1135
BsaWI	WCCGGW	2 cut(s)	229, 1177
BsaXI	ACNNNNNCTCC	2 cut(s)	10, 40
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 844, 1031, 1313
Bse1I	ACTGG	2 cut(s)	458, 849
Bse3DI	GCAATG	1 cut(s)	1162
Bse8I	GATNNNNATC	1 cut(s)	922
BseAI	TCCGGA	1 cut(s)	229
BseBI	CCWGG	3 cut(s)	59, 84, 90
BseDI	CCNNGG	4 cut(s)	297, 603, 1111, 1135
BseGI	GGATG	1 cut(s)	527
BseJI	GATNNNNATC	1 cut(s)	922
BseLI	CCNNNNNNNGG	4 cut(s)	89, 844, 1031, 1313
BseMI	GCAATG	1 cut(s)	1162
BseMII	CTCAG	4 cut(s)	82, 543, 701, 879
BseNI	ACTGG	2 cut(s)	458, 849
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	1021
BseXI	GCAGC	5 cut(s)	289, 664, 919, 1084, 1164
BsgI	GTGCAG	1 cut(s)	390
Bsh1236I	CGCG	1 cut(s)	299
BshFI	GGCC	1 cut(s)	581
BsiHKAI	GWGCWC	1 cut(s)	1021
BsiHKCI	CYCGRG	1 cut(s)	182
BsiSI	CCGG	2 cut(s)	230, 1178
BslI	CCNNNNNNNGG	4 cut(s)	89, 844, 1031, 1313
BsmAI	GTCTC	1 cut(s)	548
BsmBI	CGTCTC	1 cut(s)	548
BsmI	GAATGC	1 cut(s)	1120
BsnI	GGCC	1 cut(s)	581
BsoBI	CYCGRG	1 cut(s)	182
Bsp1286I	GDGCHC	1 cut(s)	1021
Bsp13I	TCCGGA	1 cut(s)	229
Bsp143I	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
Bsp1720I	GCTNAGC	1 cut(s)	888
BspANI	GGCC	1 cut(s)	581
BspCNI	CTCAG	4 cut(s)	81, 544, 700, 880
BspEI	TCCGGA	1 cut(s)	229
BspFNI	CGCG	1 cut(s)	299
BspLI	GGNNCC	2 cut(s)	6, 849
BspMI	ACCTGC	1 cut(s)	1043
BspPI	GGATC	6 cut(s)	164, 265, 449, 842, 855, 931
BsrBI	CCGCTC	2 cut(s)	13, 51
BsrDI	GCAATG	1 cut(s)	1162
BsrI	ACTGG	2 cut(s)	458, 849
BssECI	CCNNGG	4 cut(s)	297, 603, 1111, 1135
BssMI	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
BssNAI	GTATAC	1 cut(s)	600
BssT1I	CCWWGG	3 cut(s)	603, 1111, 1135
Bst1107I	GTATAC	1 cut(s)	600
Bst2UI	CCWGG	3 cut(s)	59, 84, 90
Bst4CI	ACNGT	4 cut(s)	626, 767, 806, 968
BstC8I	GCNNGC	1 cut(s)	1227
BstDEI	CTNAG	4 cut(s)	68, 552, 687, 888
BstDSI	CCRYGG	1 cut(s)	297
BstF5I	GGATG	1 cut(s)	527
BstFNI	CGCG	1 cut(s)	299
BstKTI	GATC	9 cut(s)	172, 260, 457, 518, 741, 850, 920, 926, 1253
BstMAI	GTCTC	1 cut(s)	548
BstMBI	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
BstMWI	GCNNNNNNNGC	6 cut(s)	48, 592, 788, 1073, 1103, 1231
BstNI	CCWGG	3 cut(s)	59, 84, 90
BstSCI	CCNGG	3 cut(s)	57, 82, 88
BstSFI	CTRYAG	3 cut(s)	732, 751, 996
BstSLI	GKGCMC	1 cut(s)	1021
BstUI	CGCG	1 cut(s)	299
BstV1I	GCAGC	5 cut(s)	289, 664, 919, 1084, 1164
BstX2I	RGATCY	4 cut(s)	515, 847, 923, 1250
BstYI	RGATCY	4 cut(s)	515, 847, 923, 1250
BstZ17I	GTATAC	1 cut(s)	600
BsuI	GTATCC	3 cut(s)	250, 286, 1294
BsuRI	GGCC	1 cut(s)	581
BtgI	CCRYGG	1 cut(s)	297
BtsCI	GGATG	1 cut(s)	527
BtsIMutI	CAGTG	1 cut(s)	465
BveI	ACCTGC	1 cut(s)	1043
Cac8I	GCNNGC	1 cut(s)	1227
CaiI	CAGNNNCTG	2 cut(s)	89, 1058
Cfr13I	GGNCC	4 cut(s)	86, 579, 1061, 1316
Cfr42I	CCGCGG	1 cut(s)	300
CseI	GACGC	1 cut(s)	503
CsiI	ACCWGGT	1 cut(s)	82
CviAII	CATG	5 cut(s)	248, 359, 491, 583, 1093
DdeI	CTNAG	4 cut(s)	68, 552, 687, 888
DpnI	GATC	9 cut(s)	171, 259, 456, 517, 740, 849, 919, 925, 1252
DpnII	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
DraI	TTTAAA	1 cut(s)	501
DraIII	CACNNNGTG	1 cut(s)	641
Eco130I	CCWWGG	3 cut(s)	603, 1111, 1135
Eco47I	GGWCC	3 cut(s)	86, 1061, 1316
Eco57I	CTGAAG	2 cut(s)	726, 960
Eco88I	CYCGRG	1 cut(s)	182
EcoO109I	RGGNCCY	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	530
EcoRII	CCWGG	3 cut(s)	57, 82, 88
EcoT14I	CCWWGG	3 cut(s)	603, 1111, 1135
EcoT22I	ATGCAT	1 cut(s)	1108
ErhI	CCWWGG	3 cut(s)	603, 1111, 1135
Esp3I	CGTCTC	1 cut(s)	548
FaeI	CATG	5 cut(s)	251, 362, 494, 586, 1096
FatI	CATG	5 cut(s)	247, 358, 490, 582, 1092
FauI	CCCGC	1 cut(s)	169
FblI	GTMKAC	1 cut(s)	599
Fnu4HI	GCNGC	9 cut(s)	11, 40, 300, 303, 675, 678, 908, 1098, 1153
FokI	GGATG	1 cut(s)	534
Fsp4HI	GCNGC	9 cut(s)	11, 40, 300, 303, 675, 678, 908, 1098, 1153
FspBI	CTAG	4 cut(s)	212, 273, 365, 420
GluI	GCNGC	9 cut(s)	11, 40, 300, 303, 675, 678, 908, 1098, 1153
GsuI	CTGGAG	1 cut(s)	152
HaeIII	GGCC	1 cut(s)	581
HapII	CCGG	2 cut(s)	230, 1178
HgaI	GACGC	1 cut(s)	503
Hin1II	CATG	5 cut(s)	251, 362, 494, 586, 1096
HincII	GTYRAC	1 cut(s)	1192
HindII	GTYRAC	1 cut(s)	1192
HindIII	AAGCTT	1 cut(s)	224
HinfI	GANTC	3 cut(s)	23, 185, 371
HpaII	CCGG	2 cut(s)	230, 1178
HphI	GGTGA	1 cut(s)	1151
Hpy166II	GTNNAC	4 cut(s)	600, 658, 1019, 1192
Hpy188I	TCNGA	6 cut(s)	174, 316, 690, 716, 933, 979
Hpy188III	TCNNGA	8 cut(s)	131, 230, 290, 338, 519, 921, 1127, 1239
Hpy8I	GTNNAC	4 cut(s)	600, 658, 1019, 1192
HpyAV	CCTTC	2 cut(s)	734, 1307
HpyCH4III	ACNGT	4 cut(s)	626, 767, 806, 968
HpyCH4IV	ACGT	1 cut(s)	557
HpyF10VI	GCNNNNNNNGC	6 cut(s)	48, 592, 788, 1073, 1103, 1231
HpyF3I	CTNAG	4 cut(s)	68, 552, 687, 888
HpySE526I	ACGT	1 cut(s)	557
Hsp92II	CATG	5 cut(s)	251, 362, 494, 586, 1096
Kpn2I	TCCGGA	1 cut(s)	229
KspI	CCGCGG	1 cut(s)	300
Kzo9I	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
LmnI	GCTCC	5 cut(s)	10, 77, 274, 1231, 1241
Lsp1109I	GCAGC	5 cut(s)	289, 664, 919, 1084, 1164
LweI	GCATC	4 cut(s)	51, 329, 370, 1248
MabI	ACCWGGT	1 cut(s)	82
MaeI	CTAG	4 cut(s)	212, 273, 365, 420
MaeII	ACGT	1 cut(s)	557
MaeIII	GTNAC	2 cut(s)	422, 665
MalI	GATC	9 cut(s)	171, 259, 456, 517, 740, 849, 919, 925, 1252
MbiI	CCGCTC	2 cut(s)	13, 51
MboI	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
MfeI	CAATTG	1 cut(s)	609
MflI	RGATCY	4 cut(s)	515, 847, 923, 1250
MhlI	GDGCHC	1 cut(s)	1021
MluCI	AATT	7 cut(s)	395, 482, 530, 609, 896, 1210, 1291
MlyI	GAGTC	2 cut(s)	194, 380
MnlI	CCTC	9 cut(s)	77, 97, 127, 130, 166, 310, 520, 802, 1035
Mph1103I	ATGCAT	1 cut(s)	1108
MroI	TCCGGA	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	876
MseI	TTAA	6 cut(s)	96, 177, 500, 828, 1161, 1209
MslI	CAYNNNNRTG	1 cut(s)	699
MspA1I	CMGCKG	4 cut(s)	164, 284, 299, 663
MspI	CCGG	2 cut(s)	230, 1178
MspR9I	CCNGG	3 cut(s)	59, 84, 90
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	1 cut(s)	1120
MvaI	CCWGG	3 cut(s)	59, 84, 90
MvnI	CGCG	1 cut(s)	299
MwoI	GCNNNNNNNGC	6 cut(s)	48, 592, 788, 1073, 1103, 1231
NdeII	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
NlaIII	CATG	5 cut(s)	251, 362, 494, 586, 1096
NlaIV	GGNNCC	2 cut(s)	6, 849
NsiI	ATGCAT	1 cut(s)	1108
PctI	GAATGC	1 cut(s)	1120
PdmI	GAANNNNTTC	1 cut(s)	876
PfeI	GAWTC	1 cut(s)	23
PflMI	CCANNNNNTGG	1 cut(s)	89
PfoI	TCCNGGA	1 cut(s)	57
PkrI	GCNGC	9 cut(s)	12, 41, 301, 304, 676, 679, 909, 1099, 1154
PleI	GAGTC	2 cut(s)	193, 379
PpsI	GAGTC	2 cut(s)	193, 379
PpuMI	RGGWCCY	1 cut(s)	86
Psp5II	RGGWCCY	1 cut(s)	86
Psp6I	CCWGG	3 cut(s)	57, 82, 88
PspGI	CCWGG	3 cut(s)	57, 82, 88
PspN4I	GGNNCC	2 cut(s)	6, 849
PspPI	GGNCC	4 cut(s)	86, 579, 1061, 1316
PspPPI	RGGWCCY	1 cut(s)	86
PsrI	GAACNNNNNNTAC	2 cut(s)	952, 984
PstNI	CAGNNNCTG	2 cut(s)	89, 1058
PsuI	RGATCY	4 cut(s)	515, 847, 923, 1250
PvuII	CAGCTG	1 cut(s)	284
RseI	CAYNNNNRTG	1 cut(s)	699
SacII	CCGCGG	1 cut(s)	300
SaqAI	TTAA	6 cut(s)	96, 177, 500, 828, 1161, 1209
SatI	GCNGC	9 cut(s)	11, 40, 300, 303, 675, 678, 908, 1098, 1153
Sau3AI	GATC	9 cut(s)	169, 257, 454, 515, 738, 847, 917, 923, 1250
Sau96I	GGNCC	4 cut(s)	86, 579, 1061, 1316
SchI	GAGTC	2 cut(s)	194, 380
ScrFI	CCNGG	3 cut(s)	59, 84, 90
SduI	GDGCHC	1 cut(s)	1021
SexAI	ACCWGGT	1 cut(s)	82
SfaNI	GCATC	4 cut(s)	51, 329, 370, 1248
SfcI	CTRYAG	3 cut(s)	732, 751, 996
Sfr303I	CCGCGG	1 cut(s)	300
SgrBI	CCGCGG	1 cut(s)	300
SinI	GGWCC	3 cut(s)	86, 1061, 1316
SmiMI	CAYNNNNRTG	1 cut(s)	699
SmlI	CTYRAG	2 cut(s)	410, 1125
SmoI	CTYRAG	2 cut(s)	410, 1125
SpeI	ACTAGT	1 cut(s)	419
Sse9I	AATT	7 cut(s)	395, 482, 530, 609, 896, 1210, 1291
SspI	AATATT	1 cut(s)	877
SspMI	CTAG	4 cut(s)	212, 273, 365, 420
StyD4I	CCNGG	3 cut(s)	57, 82, 88
StyI	CCWWGG	3 cut(s)	603, 1111, 1135
TaaI	ACNGT	4 cut(s)	626, 767, 806, 968
TaiI	ACGT	1 cut(s)	560
TaqI	TCGA	2 cut(s)	590, 741
TasI	AATT	7 cut(s)	395, 482, 530, 609, 896, 1210, 1291
TauI	GCSGC	4 cut(s)	13, 42, 302, 677
TfiI	GAWTC	1 cut(s)	23
Tru1I	TTAA	6 cut(s)	96, 177, 500, 828, 1161, 1209
Tru9I	TTAA	6 cut(s)	96, 177, 500, 828, 1161, 1209
TscAI	CASTG	1 cut(s)	465
TseI	GCWGC	5 cut(s)	302, 677, 907, 1097, 1152
TspDTI	ATGAA	7 cut(s)	267, 375, 873, 933, 1103, 1188, 1326
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	1 cut(s)	465
Van91I	CCANNNNNTGG	1 cut(s)	89
VneI	GTGCAC	1 cut(s)	1017
VpaK11BI	GGWCC	3 cut(s)	86, 1061, 1316
XapI	RAATTY	2 cut(s)	530, 1291
XcmI	CCANNNNNNNNNTGG	1 cut(s)	998
XmiI	GTMKAC	1 cut(s)	599
XmnI	GAANNNNTTC	1 cut(s)	876
XspI	CTAG	4 cut(s)	212, 273, 365, 420
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.