Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004896

Physical Location & Seq

Genomic Coordinates Reverse (-)

6459539 .. 6462092

Gene Structure 2554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G10440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGCGAAAGAGAACAGTGGTCATCATCACCAAACAGAAGCAAGAAGAAAGAAACTAACTTTGATTCTTGGTGTAAGTGGACTCTGCATTTTGTTCTATGTTTTAGGTGCATGGCAAGCCAATACCGTCCCATCTTCTATCTCGAAGCTCGGATGCGAGACGCAATCAAACCCTTCTTCGTCCTCTTCCTCTTCCTCATCTTCAGAGTCAGCTGAACTAGATTTCAAAAGCCATAATCAGATTGAGTTAAAGGAAACAAACCAAACCATTAAGTACTTTGAACCATGTGAATTATCTCTCAGTGAGTACACTCCTTGTGAAGACCGACAAAGAGGAAGAAGATTCGATAGGAACATGATGAAATATAGAGAAAGACATTGTCCTGTAAAAGATGAGCTTCTTTATTGTTTGATTCCTCCTCCACCAAACTACAAGATTCCATTTAAATGGCCACAAAGTAGAGACTATGCTTGGTATGACAATATCCCTCACAAGGAACTTAGTGTTGAGAAAGCAGTTCAAAACTGGATTCAAGTTGAAGGTGACCGCTTTAGATTCCCTGGTGGTGGTACTATGTTTCCTCGTGGAGCTGATGCTTATATCGATGATATTGCTAGGCTTATTCCTCTTACTGATGGTGGAATCAGAACAGCTATTGACACTGGATGTGGTGTTGCAAGTTTTGGTGCTTACCTCTTGAAGAGAGACATTATGGCTGTGTCTTTTGCTCCAAGAGACACTCATGAAGCTCAGGTACAGTTTGCTTTAGAACGCGGAGTTCCTGCGATAATCGGGATTATGGGATCAAGAAGACTTCCTTATCCAGCTAGAGCTTTTGATCTTGCTCATTGTTCTCGTTGTTTGATCCCTTGGTTTAAAAATGATGGTTTGTACCTTATGGAGGTCGACCGGGTTTTAAGACCGGGCGGTTACTGGATCCTCTCGGGACCACCGATTAACTGGAAACAGTACTGGAGAGGGTGGGAGAGAACAGAGGAGGATTTGAAGAAAGAGCAAGATTCAATAGAAGATGTAGCAAAGAGTCTTTGCTGGAAGAAAGTAACTGAAAAAGGTGACTTATCAATTTGGCAAAAGCCTCTCAATCACATTGAGTGTAAAAAGCTCAAACAAAACAATAAGTCACCTCCGATATGCAGCTCAGATAACGCGGATTCCGCTTGGTACAAAGACTTGGAAACTTGTATAACACCATTACCAGAAACAAACAATCCAGATGATTCAGCAGGCGGTGCACTCGAGGATTGGCCAGACCGAGCATTCGCGGTACCTCCAAGAATCATCAGAGGAACTATACCAGAAATGAACGCGGAGAAATTTAGAGAAGACAACGAGGTTTGGAAAGAGAGAATAGCACATTACAAGAAGATAGTCCCTGAGCTTTCACATGGAAGATTCAGGAACATTATGGACATGAACGCTTTTCTCGGCGGATTCGCTGCTTCCATGCTGAAATATCCCTCATGGGTCATGAACGTTGTCCCGGTCGATGCAGAGAAACAAACGTTAGGTGTGATCTACGAACGTGGATTGATAGGGACGTATCAAGATTGGTGTGAAGGATTCTCAACGTATCCAAGAACTTATGATATGATTCATGCAGGAGGATTGTTCAGCTTATACGAACATAGGTGTGATTTGACGTTGATATTGTTGGAGATGGATCGAATTTTGAGACCAGAAGGAACAGTTGTGTTGAGAGATAATGTGGAGACGTTGAATAAGGTAGAGAAGATAGTGAAGGGAATGAAGTGGAAGAGTCAAATTGTTGATCATGAGAAAGGTCCTTTTAATCCTGAGAAGATTCTTGTTGCTGTTAAAACTTATTGGACTGGTCAACCTTCTGACAAGAACAACAACAACAACAACAACAACAACAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

633

Amino Acids

72.39

Weight (kDa)

6.92

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	102 - 613	4.1e-228	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	220 - 313	5.3e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33170 AT4G10440
fragaria_vesca	FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160
malus_domestica	MD06G1125900.v1.1 MD06G1127600.v1.1 MD14G1143200.v1.1 MD14G1143400.v1.1
prunus_persica	Prupe.5G137400_v2.0.a1 Prupe.5G137400_v2.0.a1 Prupe.5G137400_v2.0.a1
pyrus_communis	pycom06g11630 pycom06g11770 pycom14g11870 pycom14g11880
rosa_chinensis	RchiOBHm_Chr7g0188141
rosa_laevigata	RLG00000004725
rosa_roxburghii	Rroxscaffold_3G00266740
rosa_rugosa	Rorug06G0488400 Rorug06G0488400 Rorug06G0488500
rosa_samantha	Rh7AG092700 Rh7BG094300 Rh7CG094000 Rh7DG094700
rosa_wichuraiana	Rw7G008000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1285
AccB1I	GGYRCC	1 cut(s)	1285
AccI	GTMKAC	1 cut(s)	906
AccII	CGCG	4 cut(s)	774, 1169, 1283, 1328
AciI	CCGC	9 cut(s)	547, 774, 927, 1169, 1176, 1248, 1283, 1328, 1449
AclI	AACGTT	2 cut(s)	1494, 1523
AclWI	GGATC	5 cut(s)	811, 859, 931, 944, 1689
AcoI	YGGCCR	2 cut(s)	449, 1265
AcsI	RAATTY	2 cut(s)	1334, 1686
AcuI	CTGAAG	1 cut(s)	186
AfaI	GTAC	8 cut(s)	275, 308, 571, 756, 893, 971, 1184, 1287
AfiI	CCNNNNNNNGG	3 cut(s)	493, 566, 901
AgsI	TTSAA	9 cut(s)	226, 281, 521, 533, 539, 700, 1006, 1023, 1738
AjnI	CCWGG	1 cut(s)	559
Alw21I	GWGCWC	1 cut(s)	1255
Alw26I	GTCTC	6 cut(s)	152, 456, 699, 729, 1687, 1724
Alw44I	GTGCAC	1 cut(s)	1251
AlwI	GGATC	5 cut(s)	811, 859, 931, 944, 1689
Ama87I	CYCGRG	2 cut(s)	943, 1256
AoxI	GGCC	2 cut(s)	449, 1265
ApaLI	GTGCAC	1 cut(s)	1251
ApeKI	GCWGC	2 cut(s)	1155, 1457
ApoI	RAATTY	2 cut(s)	1334, 1686
ArsI	GACNNNNNNTTYG	2 cut(s)	1262, 1294
Asp718I	GGTACC	1 cut(s)	1285
AspS9I	GGNCC	2 cut(s)	947, 1802
AsuC2I	CCSGG	3 cut(s)	911, 924, 1502
AsuHPI	GGTGA	4 cut(s)	20, 554, 1085, 1134
AvaI	CYCGRG	2 cut(s)	943, 1256
AvaII	GGWCC	2 cut(s)	947, 1802
BaeGI	GKGCMC	1 cut(s)	1255
BalI	TGGCCA	2 cut(s)	451, 1267
BamHI	GGATCC	1 cut(s)	936
BanI	GGYRCC	1 cut(s)	1285
BarI	GAAGNNNNNNTAC	2 cut(s)	738, 770
BauI	CACGAG	1 cut(s)	582
BbsI	GAAGAC	3 cut(s)	327, 817, 1350
Bbv12I	GWGCWC	1 cut(s)	1255
BbvI	GCAGC	2 cut(s)	1167, 1444
BccI	CCATC	4 cut(s)	139, 629, 878, 1672
BcgI	CGANNNNNNTGC	2 cut(s)	593, 627
BciT130I	CCWGG	1 cut(s)	561
BciVI	GTATCC	1 cut(s)	1602
BclI	TGATCA	1 cut(s)	1789
BcnI	CCSGG	3 cut(s)	911, 924, 1502
BcoDI	GTCTC	6 cut(s)	152, 456, 699, 729, 1687, 1724
BfaI	CTAG	4 cut(s)	218, 615, 828, 1900
BfuI	GTATCC	1 cut(s)	1602
BisI	GCNGC	2 cut(s)	1156, 1458
BlsI	GCNGC	2 cut(s)	1157, 1459
BmcAI	AGTACT	2 cut(s)	275, 971
Bme1390I	CCNGG	4 cut(s)	561, 911, 924, 1502
Bme18I	GGWCC	2 cut(s)	947, 1802
BmeT110I	CYCGRG	2 cut(s)	943, 1256
BmgT120I	GGNCC	2 cut(s)	947, 1802
BmiI	GGNNCC	3 cut(s)	938, 948, 1287
BmrFI	CCNGG	4 cut(s)	561, 911, 924, 1502
BmsI	GCATC	3 cut(s)	143, 583, 1498
BpiI	GAAGAC	3 cut(s)	327, 817, 1350
BpmI	CTGGAG	1 cut(s)	994
Bpu10I	CCTNAGC	2 cut(s)	750, 1395
BpuMI	CCSGG	3 cut(s)	911, 924, 1502
Bsa29I	ATCGAT	1 cut(s)	603
BsaI	GGTCTC	1 cut(s)	1687
BsaJI	CCNNGG	2 cut(s)	559, 869
Bsc4I	CCNNNNNNNGG	3 cut(s)	493, 566, 901
Bse1I	ACTGG	6 cut(s)	530, 667, 938, 965, 977, 1855
BseBI	CCWGG	1 cut(s)	561
BseCI	ATCGAT	1 cut(s)	603
BseDI	CCNNGG	2 cut(s)	559, 869
BseGI	GGATG	2 cut(s)	158, 671
BseLI	CCNNNNNNNGG	3 cut(s)	493, 566, 901
BseMII	CTCAG	5 cut(s)	313, 764, 1173, 1386, 1806
BseNI	ACTGG	6 cut(s)	530, 667, 938, 965, 977, 1855
BseRI	GAGGAG	2 cut(s)	408, 1010
BseSI	GKGCMC	1 cut(s)	1255
BseXI	GCAGC	2 cut(s)	1167, 1444
Bsh1236I	CGCG	4 cut(s)	774, 1169, 1283, 1328
Bsh1285I	CGRYCG	2 cut(s)	910, 1506
BshFI	GGCC	2 cut(s)	451, 1267
BshNI	GGYRCC	1 cut(s)	1285
BshVI	ATCGAT	1 cut(s)	603
BsiEI	CGRYCG	2 cut(s)	910, 1506
BsiHKAI	GWGCWC	1 cut(s)	1255
BsiHKCI	CYCGRG	2 cut(s)	943, 1256
BsiSI	CCGG	3 cut(s)	910, 923, 1502
BslFI	GGGAC	5 cut(s)	113, 960, 1376, 1484, 1570
BslI	CCNNNNNNNGG	3 cut(s)	493, 566, 901
BsmAI	GTCTC	6 cut(s)	152, 456, 699, 729, 1687, 1724
BsmBI	CGTCTC	2 cut(s)	152, 1724
BsmFI	GGGAC	5 cut(s)	113, 960, 1376, 1484, 1570
BsmI	GAATGC	1 cut(s)	1277
BsnI	GGCC	2 cut(s)	451, 1267
Bso31I	GGTCTC	1 cut(s)	1687
BsoBI	CYCGRG	2 cut(s)	943, 1256
Bsp1286I	GDGCHC	1 cut(s)	1255
Bsp143I	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
BspACI	CCGC	9 cut(s)	547, 774, 927, 1169, 1176, 1248, 1283, 1328, 1449
BspANI	GGCC	2 cut(s)	451, 1267
BspCNI	CTCAG	5 cut(s)	312, 763, 1172, 1387, 1807
BspDI	ATCGAT	1 cut(s)	603
BspFNI	CGCG	4 cut(s)	774, 1169, 1283, 1328
BspHI	TCATGA	3 cut(s)	742, 1488, 1792
BspLI	GGNNCC	3 cut(s)	938, 948, 1287
BspPI	GGATC	5 cut(s)	811, 859, 931, 944, 1689
BspT107I	GGYRCC	1 cut(s)	1285
BspTNI	GGTCTC	1 cut(s)	1687
BsrI	ACTGG	6 cut(s)	530, 667, 938, 965, 977, 1855
BssECI	CCNNGG	2 cut(s)	559, 869
BssMI	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
BssSI	CACGAG	1 cut(s)	582
BssT1I	CCWWGG	1 cut(s)	869
Bst2BI	CACGAG	1 cut(s)	582
Bst2UI	CCWGG	1 cut(s)	561
Bst4CI	ACNGT	5 cut(s)	17, 127, 759, 969, 1708
Bst6I	CTCTTC	4 cut(s)	190, 196, 695, 1769
BstAPI	GCANNNNNTGC	1 cut(s)	1250
BstC8I	GCNNGC	2 cut(s)	117, 1246
BstDEI	CTNAG	6 cut(s)	299, 500, 750, 1159, 1395, 1815
BstEII	GGTNACC	1 cut(s)	542
BstENI	CCTNNNNNAGG	1 cut(s)	899
BstF5I	GGATG	2 cut(s)	158, 671
BstFNI	CGCG	4 cut(s)	774, 1169, 1283, 1328
BstKTI	GATC	7 cut(s)	806, 841, 867, 939, 1536, 1684, 1792
BstMAI	GTCTC	6 cut(s)	152, 456, 699, 729, 1687, 1724
BstMBI	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
BstMCI	CGRYCG	2 cut(s)	910, 1506
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 1175, 1250
BstNI	CCWGG	1 cut(s)	561
BstPI	GGTNACC	1 cut(s)	542
BstSCI	CCNGG	4 cut(s)	559, 909, 922, 1500
BstSLI	GKGCMC	1 cut(s)	1255
BstUI	CGCG	4 cut(s)	774, 1169, 1283, 1328
BstV1I	GCAGC	2 cut(s)	1167, 1444
BstV2I	GAAGAC	3 cut(s)	327, 817, 1350
BstX2I	RGATCY	1 cut(s)	936
BstXI	CCANNNNNNTGG	1 cut(s)	447
BstYI	RGATCY	1 cut(s)	936
Bsu15I	ATCGAT	1 cut(s)	603
BsuI	GTATCC	1 cut(s)	1602
BsuRI	GGCC	2 cut(s)	451, 1267
BsuTUI	ATCGAT	1 cut(s)	603
BtsCI	GGATG	2 cut(s)	158, 671
BtsIMutI	CAGTG	3 cut(s)	22, 307, 660
Cac8I	GCNNGC	2 cut(s)	117, 1246
CciI	TCATGA	3 cut(s)	742, 1488, 1792
Cfr13I	GGNCC	2 cut(s)	947, 1802
ClaI	ATCGAT	1 cut(s)	603
CseI	GACGC	1 cut(s)	169
Csp6I	GTAC	8 cut(s)	274, 307, 570, 755, 892, 970, 1183, 1286
CviQI	GTAC	8 cut(s)	274, 307, 570, 755, 892, 970, 1183, 1286
DdeI	CTNAG	6 cut(s)	299, 500, 750, 1159, 1395, 1815
DpnI	GATC	7 cut(s)	805, 840, 866, 938, 1535, 1683, 1791
DpnII	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
DraI	TTTAAA	2 cut(s)	445, 877
EaeI	YGGCCR	2 cut(s)	449, 1265
Eam1104I	CTCTTC	4 cut(s)	190, 196, 695, 1769
EarI	CTCTTC	4 cut(s)	190, 196, 695, 1769
EciI	GGCGGA	1 cut(s)	1464
Eco130I	CCWWGG	1 cut(s)	869
Eco31I	GGTCTC	1 cut(s)	1687
Eco47I	GGWCC	2 cut(s)	947, 1802
Eco57I	CTGAAG	1 cut(s)	186
Eco88I	CYCGRG	2 cut(s)	943, 1256
Eco91I	GGTNACC	1 cut(s)	542
EcoNI	CCTNNNNNAGG	1 cut(s)	899
EcoO109I	RGGNCCY	1 cut(s)	1802
EcoO65I	GGTNACC	1 cut(s)	542
EcoRII	CCWGG	1 cut(s)	559
EcoT14I	CCWWGG	1 cut(s)	869
ErhI	CCWWGG	1 cut(s)	869
Esp3I	CGTCTC	2 cut(s)	152, 1724
FalI	AAGNNNNNCTT	4 cut(s)	381, 413, 802, 834
FaqI	GGGAC	5 cut(s)	113, 960, 1376, 1484, 1570
FbaI	TGATCA	1 cut(s)	1789
FblI	GTMKAC	1 cut(s)	906
Fnu4HI	GCNGC	2 cut(s)	1156, 1458
FokI	GGATG	2 cut(s)	165, 678
Fsp4HI	GCNGC	2 cut(s)	1156, 1458
FspBI	CTAG	4 cut(s)	218, 615, 828, 1900
GluI	GCNGC	2 cut(s)	1156, 1458
GsuI	CTGGAG	1 cut(s)	994
HaeIII	GGCC	2 cut(s)	451, 1267
HapII	CCGG	3 cut(s)	910, 923, 1502
HgaI	GACGC	1 cut(s)	169
HincII	GTYRAC	2 cut(s)	907, 1856
HindII	GTYRAC	2 cut(s)	907, 1856
HpaII	CCGG	3 cut(s)	910, 923, 1502
HphI	GGTGA	4 cut(s)	20, 554, 1085, 1134
Hpy166II	GTNNAC	5 cut(s)	80, 309, 907, 1253, 1856
Hpy188I	TCNGA	8 cut(s)	152, 205, 240, 647, 1149, 1162, 1304, 1864
Hpy8I	GTNNAC	5 cut(s)	80, 309, 907, 1253, 1856
HpyAV	CCTTC	6 cut(s)	183, 533, 1571, 1694, 1753, 1869
HpyCH4III	ACNGT	5 cut(s)	17, 127, 759, 969, 1708
HpyCH4IV	ACGT	7 cut(s)	1494, 1523, 1543, 1559, 1589, 1661, 1733
HpyCH4V	TGCA	7 cut(s)	87, 110, 677, 1155, 1253, 1511, 1619
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 1175, 1250
HpyF3I	CTNAG	6 cut(s)	299, 500, 750, 1159, 1395, 1815
HpySE526I	ACGT	7 cut(s)	1494, 1523, 1543, 1559, 1589, 1661, 1733
KpnI	GGTACC	1 cut(s)	1289
Ksp22I	TGATCA	1 cut(s)	1789
Kzo9I	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
LmnI	GCTCC	2 cut(s)	587, 733
Lsp1109I	GCAGC	2 cut(s)	1167, 1444
LweI	GCATC	3 cut(s)	143, 583, 1498
MaeI	CTAG	4 cut(s)	218, 615, 828, 1900
MaeII	ACGT	7 cut(s)	1494, 1523, 1543, 1559, 1589, 1661, 1733
MaeIII	GTNAC	5 cut(s)	542, 929, 1060, 1073, 1140
MalI	GATC	7 cut(s)	805, 840, 866, 938, 1535, 1683, 1791
MboI	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
MflI	RGATCY	1 cut(s)	936
MhlI	GDGCHC	1 cut(s)	1255
MlsI	TGGCCA	2 cut(s)	451, 1267
MluCI	AATT	5 cut(s)	290, 1083, 1334, 1686, 1782
MluNI	TGGCCA	2 cut(s)	451, 1267
MlyI	GAGTC	4 cut(s)	75, 215, 1051, 1786
MmeI	TCCRAC	1 cut(s)	1653
Mox20I	TGGCCA	2 cut(s)	451, 1267
MscI	TGGCCA	2 cut(s)	451, 1267
MseI	TTAA	8 cut(s)	248, 270, 444, 876, 917, 957, 1809, 1836
MslI	CAYNNNNRTG	2 cut(s)	445, 1650
Msp20I	TGGCCA	2 cut(s)	451, 1267
MspA1I	CMGCKG	1 cut(s)	212
MspI	CCGG	3 cut(s)	910, 923, 1502
MspR9I	CCNGG	4 cut(s)	561, 911, 924, 1502
Mva1269I	GAATGC	1 cut(s)	1277
MvaI	CCWGG	1 cut(s)	561
MvnI	CGCG	4 cut(s)	774, 1169, 1283, 1328
MwoI	GCNNNNNNNGC	3 cut(s)	116, 1175, 1250
NciI	CCSGG	3 cut(s)	911, 924, 1502
NdeII	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
NlaIV	GGNNCC	3 cut(s)	938, 948, 1287
NmeAIII	GCCGAG	1 cut(s)	1425
NmuCI	GTSAC	3 cut(s)	542, 1073, 1140
PaeR7I	CTCGAG	1 cut(s)	1256
PagI	TCATGA	3 cut(s)	742, 1488, 1792
PcsI	WCGNNNNNNNCGW	1 cut(s)	950
PctI	GAATGC	1 cut(s)	1277
PflFI	GACNNNGTC	1 cut(s)	378
PkrI	GCNGC	2 cut(s)	1157, 1459
PleI	GAGTC	4 cut(s)	75, 214, 1050, 1785
PpsI	GAGTC	4 cut(s)	75, 214, 1050, 1785
PpuMI	RGGWCCY	1 cut(s)	1802
Psp1406I	AACGTT	2 cut(s)	1494, 1523
Psp5II	RGGWCCY	1 cut(s)	1802
Psp6I	CCWGG	1 cut(s)	559
PspEI	GGTNACC	1 cut(s)	542
PspGI	CCWGG	1 cut(s)	559
PspN4I	GGNNCC	3 cut(s)	938, 948, 1287
PspPI	GGNCC	2 cut(s)	947, 1802
PspPPI	RGGWCCY	1 cut(s)	1802
PspXI	VCTCGAGB	1 cut(s)	1256
PsuI	RGATCY	1 cut(s)	936
PsyI	GACNNNGTC	1 cut(s)	378
PvuII	CAGCTG	1 cut(s)	212
RsaI	GTAC	8 cut(s)	275, 308, 571, 756, 893, 971, 1184, 1287
RsaNI	GTAC	8 cut(s)	274, 307, 570, 755, 892, 970, 1183, 1286
RseI	CAYNNNNRTG	2 cut(s)	445, 1650
SalI	GTCGAC	1 cut(s)	905
SaqAI	TTAA	8 cut(s)	248, 270, 444, 876, 917, 957, 1809, 1836
SatI	GCNGC	2 cut(s)	1156, 1458
Sau3AI	GATC	7 cut(s)	803, 838, 864, 936, 1533, 1681, 1789
Sau96I	GGNCC	2 cut(s)	947, 1802
ScaI	AGTACT	2 cut(s)	275, 971
SchI	GAGTC	4 cut(s)	75, 215, 1051, 1786
ScrFI	CCNGG	4 cut(s)	561, 911, 924, 1502
SduI	GDGCHC	1 cut(s)	1255
SfaNI	GCATC	3 cut(s)	143, 583, 1498
Sfr274I	CTCGAG	1 cut(s)	1256
SinI	GGWCC	2 cut(s)	947, 1802
SlaI	CTCGAG	1 cut(s)	1256
SmiI	ATTTAAAT	1 cut(s)	445
SmiMI	CAYNNNNRTG	2 cut(s)	445, 1650
SmlI	CTYRAG	1 cut(s)	1256
SmoI	CTYRAG	1 cut(s)	1256
Sse9I	AATT	5 cut(s)	290, 1083, 1334, 1686, 1782
SsiI	CCGC	9 cut(s)	547, 774, 927, 1169, 1176, 1248, 1283, 1328, 1449
SspMI	CTAG	4 cut(s)	218, 615, 828, 1900
StyD4I	CCNGG	4 cut(s)	559, 909, 922, 1500
StyI	CCWWGG	1 cut(s)	869
SwaI	ATTTAAAT	1 cut(s)	445
TaaI	ACNGT	5 cut(s)	17, 127, 759, 969, 1708
TaiI	ACGT	7 cut(s)	1497, 1526, 1546, 1562, 1592, 1664, 1736
TaqI	TCGA	7 cut(s)	143, 345, 603, 906, 1257, 1506, 1684
TaqII	GACCGA	2 cut(s)	339, 1287
TasI	AATT	5 cut(s)	290, 1083, 1334, 1686, 1782
TatI	WGTACW	3 cut(s)	273, 306, 969
Tru1I	TTAA	8 cut(s)	248, 270, 444, 876, 917, 957, 1809, 1836
Tru9I	TTAA	8 cut(s)	248, 270, 444, 876, 917, 957, 1809, 1836
TscAI	CASTG	3 cut(s)	22, 307, 667
TseFI	GTSAC	3 cut(s)	542, 1073, 1140
TseI	GCWGC	2 cut(s)	1155, 1457
Tsp45I	GTSAC	3 cut(s)	542, 1073, 1140
TspDTI	ATGAA	7 cut(s)	374, 759, 1337, 1448, 1505, 1604, 1781
TspRI	CASTG	3 cut(s)	22, 307, 667
Tth111I	GACNNNGTC	1 cut(s)	378
VneI	GTGCAC	1 cut(s)	1251
VpaK11BI	GGWCC	2 cut(s)	947, 1802
XagI	CCTNNNNNAGG	1 cut(s)	899
XapI	RAATTY	2 cut(s)	1334, 1686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	957
XhoI	CTCGAG	1 cut(s)	1256
XmiI	GTMKAC	1 cut(s)	906
XspI	CTAG	4 cut(s)	218, 615, 828, 1900
ZrmI	AGTACT	2 cut(s)	275, 971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.