Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0004896

Physical Location & Seq

Genomic Coordinates Reverse (-)

16866236 .. 16868671

Gene Structure 2436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g11630.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGACAATGGATTGTAGTGGTGGATTGCCAAAGCACCATTACCTAGAATCCAAGAAGAAGAGGCTCACTTGGATCTTCGGGGTTAGTGCCTTGTGCGTAGTATGTTACATGTTAGGAGCTTTGTTAGGAGCTTGGCAAACCATTTCTGCCCCTGTCAATCAATCTGAGCTGTACCAAAGGTTCAGTTGTGATGAAACGTTATCTCAATCCGGGAACAAAACTTCCTCATCTGTGTCATCATCATCGCTTCATTTGGACTTCGAAAGCCATCATCAAGCAGACAGCAACAAAACCGAGGCTGTCCAGAAGTTCCCACTGTGTGACATGTCTTATAGCGAGTACACTCCATGCCAGGATCCAACAAGAGGGGATAAATTTGATAGGAACATGTGGAAAAACAGAGAGAGGCATTGCCCTACCAAAGAAGAACAACTTCTTTGCCTTATTCCTGCTCCACCAAAGTATAAGATCCCTTTCAAGTGGCCTCAGAGTCGTGATTTTGCTTGGTATGACAACATTCCCCATATAGAACTCAGCATTGAGAAAGCTGGCCAGAATTGGATTCAAGTCGTGGGTGACAGGTTTAGATTCCCCGGGGGAGGTACCATGTTTCGGAAGGGAGCTGATGCGTACATAGATGACATTGACGCGCTCATTCCTCTCACTAAGGGCAACATCAGAACTGCAATCGATACTGGCTGTGGTGTAGCCAGTTGGGGTGCCTACCTGTTGAAGAGGGACATCGTGACAATGTCTTTTGCGCCAAGAGATACGCATGAAGCACAGGTCCAGTTTGCATTGGAGCGCGGAGTTCCTGCTATGATTGGTGCCCTGGCTTCAAAGAGGCTTCCCTACCCTGCAAGGGCTTTCGATATGGCCCATTGTTCCCGCTGCTTGATCCCTTGGATGAACTATGATGGTATGTATCTAATTGAAGTGGACAGAGTTCTAAGGCCTGGTGGTTATTGGATTCTTTCCGGGCCGCCTATTCACTGGAAAAAAAACTGGAGGGGATGGAACAGAACTCGAGAGGATTTGAAACAAGAGCAAGATTCTATTGAGTCTGTTGCAAAGCGCCTGTGCTGGAAGAAGGTGATCGAGAAGAACAATCTTGCAATCTGGCAAAAACCTATCAACCACGTCAAATGCGTTAAGAGCAGGAAGGTCTATAAAACACCACATTTATGCAAATCAGACAATCCAGATATGGCTTGGGAAAGAGACATGGAGAGATGCATTACTCCTCTACAGGAGACCAGCAATTCCAATGACGTTGCTGGTGGGGCGTTGGAGAAATGGCCGGAGCGTGCATTTGCTGTCCCTCCTAGAATCAGCAGTGGTTCAATACCAGGAATCACTGCTGAGAAACTCCGCGAGGATAATCAACTGTGGAAAGAAAGGGTGGAACATTACAAGCGTATCATACCAATTTCCAATGGAAGGTATAGGAATGTGATGGACATGAATGCTTACCTCGGTGGATTTGCTGCAGCGTTGTCAAAATATCCGGTGTGGGTTATGAACACAGTCCCTGCCAACTCAAACCAGGACACCCTTGGAGTGATTTACGAACGGGGTTTCATTGGAACATACCAGGATTGGTGCGAGGCATTTTCAACTTATCCCAGAACATATGATCTCATCCACGCTGGGGGAGTCTTCAGCATATATCAGGACAGGTGTGACATAACACTCATTTTACTGGAGATGGATAGGATCCTGAGGCCGGAAGGAACGGTTCTGTTTAGGGATACTGTAGAGATCCTGGTGAAAATAAAGGCGGTTACCGACGGAATGAGGTGGAAGAGCCATATTAGGGATCATGAAAGTGGACCTTTTAATCCAGAGAAAATTCTTCTTGCTGAGAAAACTTACTGGACTGGTGAAGATAAAAAAGAAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

635

Amino Acids

72.69

Weight (kDa)

8.65

Isoelectric Point (pI)

43.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33170 AT4G10440
fragaria_vesca	FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160 FvH4_5g10160
malus_domestica	MD06G1125900.v1.1 MD06G1127600.v1.1 MD14G1143200.v1.1 MD14G1143400.v1.1
prunus_persica	Prupe.5G137400_v2.0.a1 Prupe.5G137400_v2.0.a1 Prupe.5G137400_v2.0.a1
pyrus_communis	pycom06g11630 pycom06g11770 pycom14g11870 pycom14g11880
rosa_chinensis	RchiOBHm_Chr7g0188141
rosa_laevigata	RLG00000004725
rosa_roxburghii	Rroxscaffold_3G00266740
rosa_rugosa	Rorug06G0488400 Rorug06G0488400 Rorug06G0488500
rosa_samantha	Rh7AG092700 Rh7BG094300 Rh7CG094000 Rh7DG094700
rosa_wichuraiana	Rw7G008000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	602
AccB1I	GGYRCC	3 cut(s)	602, 719, 827
AccII	CGCG	3 cut(s)	650, 807, 1374
AciI	CCGC	5 cut(s)	807, 889, 983, 1372, 1781
AclI	AACGTT	1 cut(s)	197
AclWI	GGATC	9 cut(s)	80, 350, 363, 463, 892, 1711, 1724, 1756, 1827
AcoI	YGGCCR	2 cut(s)	550, 1298
AcsI	RAATTY	2 cut(s)	374, 1851
AcuI	CTGAAG	1 cut(s)	1645
AdeI	CACNNNGTG	1 cut(s)	320
AfaI	GTAC	4 cut(s)	173, 341, 604, 632
AfiI	CCNNNNNNNGG	8 cut(s)	365, 599, 612, 862, 1440, 1651, 1726, 1816
AflIII	ACRYGT	3 cut(s)	108, 324, 387
AgsI	TTSAA	8 cut(s)	478, 566, 733, 840, 935, 1039, 1344, 1617
AjiI	CACGTC	1 cut(s)	1141
AjnI	CCWGG	7 cut(s)	351, 831, 955, 1348, 1545, 1593, 1764
AloI	GAACNNNNNNTCC	2 cut(s)	206, 238
AluBI	AGCT	5 cut(s)	119, 131, 169, 548, 623
AluI	AGCT	5 cut(s)	119, 131, 169, 548, 623
Alw26I	GTCTC	2 cut(s)	1215, 1247
AlwI	GGATC	9 cut(s)	80, 350, 363, 463, 892, 1711, 1724, 1756, 1827
AlwNI	CAGNNNCTG	1 cut(s)	1532
Ama87I	CYCGRG	2 cut(s)	593, 1026
AoxI	GGCC	7 cut(s)	482, 550, 876, 953, 980, 1298, 1724
ApeKI	GCWGC	3 cut(s)	891, 1487, 1490
ApoI	RAATTY	2 cut(s)	374, 1851
Asp700I	GAANNNNTTC	1 cut(s)	432
Asp718I	GGTACC	1 cut(s)	602
AspLEI	GCGC	4 cut(s)	652, 763, 807, 1077
AspS9I	GGNCC	4 cut(s)	787, 877, 980, 1832
AsuC2I	CCSGG	4 cut(s)	211, 594, 595, 979
AsuHPI	GGTGA	4 cut(s)	587, 1105, 1780, 1895
AsuII	TTCGAA	1 cut(s)	261
AvaI	CYCGRG	2 cut(s)	593, 1026
AvaII	GGWCC	2 cut(s)	787, 1832
AxyI	CCTNAGG	1 cut(s)	1721
BaeGI	GKGCMC	1 cut(s)	832
BaeI	ACNNNNGTAYC	2 cut(s)	1402, 1435
BalI	TGGCCA	1 cut(s)	552
BamHI	GGATCC	2 cut(s)	355, 1716
BanI	GGYRCC	3 cut(s)	602, 719, 827
BbsI	GAAGAC	1 cut(s)	1651
BbvI	GCAGC	3 cut(s)	878, 1474, 1502
BccI	CCATC	5 cut(s)	276, 911, 1008, 1450, 1702
BciT130I	CCWGG	7 cut(s)	353, 833, 957, 1350, 1547, 1595, 1766
BciVI	GTATCC	1 cut(s)	1744
BcnI	CCSGG	4 cut(s)	211, 594, 595, 979
BcoDI	GTCTC	2 cut(s)	1215, 1247
BfaI	CTAG	2 cut(s)	44, 1326
BfmI	CTRYAG	3 cut(s)	1247, 1488, 1755
BfoI	RGCGCY	1 cut(s)	1078
BfuI	GTATCC	1 cut(s)	1744
BisI	GCNGC	4 cut(s)	892, 983, 1488, 1491
BlsI	GCNGC	4 cut(s)	893, 984, 1489, 1492
Bme18I	GGWCC	2 cut(s)	787, 1832
BmeT110I	CYCGRG	2 cut(s)	593, 1026
BmgBI	CACGTC	1 cut(s)	1141
BmgT120I	GGNCC	4 cut(s)	787, 877, 980, 1832
BmiI	GGNNCC	5 cut(s)	357, 604, 721, 829, 1718
BmsI	GCATC	2 cut(s)	616, 1223
BpiI	GAAGAC	1 cut(s)	1651
BpmI	CTGGAG	2 cut(s)	1027, 1724
Bpu14I	TTCGAA	1 cut(s)	261
BpuMI	CCSGG	4 cut(s)	211, 594, 595, 979
Bsa29I	ATCGAT	1 cut(s)	690
BsaI	GGTCTC	1 cut(s)	1247
BsaJI	CCNNGG	8 cut(s)	294, 592, 593, 594, 831, 902, 1474, 1555
BsaWI	WCCGGW	1 cut(s)	1507
Bsc4I	CCNNNNNNNGG	8 cut(s)	365, 599, 612, 862, 1440, 1651, 1726, 1816
Bse1I	ACTGG	8 cut(s)	700, 711, 790, 998, 1010, 1707, 1880, 1885
Bse21I	CCTNAGG	1 cut(s)	1721
Bse3DI	GCAATG	1 cut(s)	409
BseBI	CCWGG	7 cut(s)	353, 833, 957, 1350, 1547, 1595, 1766
BseCI	ATCGAT	1 cut(s)	690
BseDI	CCNNGG	8 cut(s)	294, 592, 593, 594, 831, 902, 1474, 1555
BseGI	GGATG	3 cut(s)	912, 1019, 1641
BseLI	CCNNNNNNNGG	8 cut(s)	365, 599, 612, 862, 1440, 1651, 1726, 1816
BseMI	GCAATG	1 cut(s)	409
BseMII	CTCAG	6 cut(s)	156, 500, 547, 1353, 1712, 1854
BseNI	ACTGG	8 cut(s)	700, 711, 790, 998, 1010, 1707, 1880, 1885
BseRI	GAGGAG	1 cut(s)	1233
BseSI	GKGCMC	1 cut(s)	832
BseXI	GCAGC	3 cut(s)	878, 1474, 1502
BseYI	CCCAGC	1 cut(s)	1649
Bsh1236I	CGCG	3 cut(s)	650, 807, 1374
BshFI	GGCC	7 cut(s)	484, 552, 878, 955, 982, 1300, 1726
BshNI	GGYRCC	3 cut(s)	602, 719, 827
BshVI	ATCGAT	1 cut(s)	690
BsiHKCI	CYCGRG	2 cut(s)	593, 1026
BsiSI	CCGG	6 cut(s)	210, 594, 978, 1301, 1508, 1727
BslFI	GGGAC	3 cut(s)	752, 1304, 1514
BslI	CCNNNNNNNGG	8 cut(s)	365, 599, 612, 862, 1440, 1651, 1726, 1816
BsmAI	GTCTC	2 cut(s)	1215, 1247
BsmFI	GGGAC	3 cut(s)	752, 1304, 1514
BsmI	GAATGC	1 cut(s)	1471
BsnI	GGCC	7 cut(s)	484, 552, 878, 955, 982, 1300, 1726
Bso31I	GGTCTC	1 cut(s)	1247
BsoBI	CYCGRG	2 cut(s)	593, 1026
Bsp119I	TTCGAA	1 cut(s)	261
Bsp1286I	GDGCHC	1 cut(s)	832
Bsp143I	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
BspACI	CCGC	5 cut(s)	807, 889, 983, 1372, 1781
BspANI	GGCC	7 cut(s)	484, 552, 878, 955, 982, 1300, 1726
BspCNI	CTCAG	6 cut(s)	157, 499, 546, 1354, 1713, 1855
BspDI	ATCGAT	1 cut(s)	690
BspFNI	CGCG	3 cut(s)	650, 807, 1374
BspHI	TCATGA	1 cut(s)	1822
BspLI	GGNNCC	5 cut(s)	357, 604, 721, 829, 1718
BspMAI	CTGCAG	1 cut(s)	1492
BspPI	GGATC	9 cut(s)	80, 350, 363, 463, 892, 1711, 1724, 1756, 1827
BspQI	GCTCTTC	1 cut(s)	1799
BspT104I	TTCGAA	1 cut(s)	261
BspT107I	GGYRCC	3 cut(s)	602, 719, 827
BspTNI	GGTCTC	1 cut(s)	1247
BsrDI	GCAATG	1 cut(s)	409
BsrI	ACTGG	8 cut(s)	700, 711, 790, 998, 1010, 1707, 1880, 1885
BssECI	CCNNGG	8 cut(s)	294, 592, 593, 594, 831, 902, 1474, 1555
BssMI	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
BssT1I	CCWWGG	2 cut(s)	902, 1555
Bst2UI	CCWGG	7 cut(s)	353, 833, 957, 1350, 1547, 1595, 1766
Bst4CI	ACNGT	5 cut(s)	318, 1389, 1528, 1738, 1756
Bst6I	CTCTTC	3 cut(s)	53, 728, 1799
BstBI	TTCGAA	1 cut(s)	261
BstC8I	GCNNGC	2 cut(s)	550, 1308
BstDEI	CTNAG	8 cut(s)	165, 486, 533, 666, 950, 1362, 1721, 1863
BstEII	GGTNACC	1 cut(s)	1783
BstF5I	GGATG	3 cut(s)	912, 1019, 1641
BstFNI	CGCG	3 cut(s)	650, 807, 1374
BstH2I	RGCGCY	1 cut(s)	1078
BstHHI	GCGC	4 cut(s)	652, 763, 807, 1077
BstKTI	GATC	9 cut(s)	75, 358, 471, 900, 1098, 1639, 1719, 1764, 1822
BstMAI	GTCTC	2 cut(s)	1215, 1247
BstMBI	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
BstMWI	GCNNNNNNNGC	2 cut(s)	1155, 1283
BstNI	CCWGG	7 cut(s)	353, 833, 957, 1350, 1547, 1595, 1766
BstNSI	RCATGY	3 cut(s)	112, 328, 391
BstPI	GGTNACC	1 cut(s)	1783
BstSFI	CTRYAG	3 cut(s)	1247, 1488, 1755
BstSLI	GKGCMC	1 cut(s)	832
BstUI	CGCG	3 cut(s)	650, 807, 1374
BstV1I	GCAGC	3 cut(s)	878, 1474, 1502
BstV2I	GAAGAC	1 cut(s)	1651
BstX2I	RGATCY	5 cut(s)	72, 355, 468, 1716, 1761
BstYI	RGATCY	5 cut(s)	72, 355, 468, 1716, 1761
Bsu15I	ATCGAT	1 cut(s)	690
Bsu36I	CCTNAGG	1 cut(s)	1721
BsuI	GTATCC	1 cut(s)	1744
BsuRI	GGCC	7 cut(s)	484, 552, 878, 955, 982, 1300, 1726
BsuTUI	ATCGAT	1 cut(s)	690
BtgZI	GCGATG	1 cut(s)	228
BtrI	CACGTC	1 cut(s)	1141
BtsCI	GGATG	3 cut(s)	912, 1019, 1641
BtsI	GCAGTG	2 cut(s)	1342, 1356
BtsIMutI	CAGTG	4 cut(s)	314, 991, 1342, 1356
Cac8I	GCNNGC	2 cut(s)	550, 1308
CaiI	CAGNNNCTG	1 cut(s)	1532
CciI	TCATGA	1 cut(s)	1822
CfoI	GCGC	4 cut(s)	652, 763, 807, 1077
Cfr13I	GGNCC	4 cut(s)	787, 877, 980, 1832
Cfr9I	CCCGGG	1 cut(s)	593
ClaI	ATCGAT	1 cut(s)	690
CseI	GACGC	1 cut(s)	656
Csp6I	GTAC	4 cut(s)	172, 340, 603, 631
CviAII	CATG	9 cut(s)	109, 325, 348, 388, 607, 776, 1225, 1462, 1823
CviQI	GTAC	4 cut(s)	172, 340, 603, 631
DdeI	CTNAG	8 cut(s)	165, 486, 533, 666, 950, 1362, 1721, 1863
DpnI	GATC	9 cut(s)	74, 357, 470, 899, 1097, 1638, 1718, 1763, 1821
DpnII	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
DraIII	CACNNNGTG	1 cut(s)	320
EaeI	YGGCCR	2 cut(s)	550, 1298
Eam1104I	CTCTTC	3 cut(s)	53, 728, 1799
EarI	CTCTTC	3 cut(s)	53, 728, 1799
Eco130I	CCWWGG	2 cut(s)	902, 1555
Eco147I	AGGCCT	1 cut(s)	955
Eco31I	GGTCTC	1 cut(s)	1247
Eco47I	GGWCC	2 cut(s)	787, 1832
Eco57I	CTGAAG	1 cut(s)	1645
Eco81I	CCTNAGG	1 cut(s)	1721
Eco88I	CYCGRG	2 cut(s)	593, 1026
Eco91I	GGTNACC	1 cut(s)	1783
EcoO65I	GGTNACC	1 cut(s)	1783
EcoRII	CCWGG	7 cut(s)	351, 831, 955, 1348, 1545, 1593, 1764
EcoT14I	CCWWGG	2 cut(s)	902, 1555
EcoT22I	ATGCAT	1 cut(s)	1238
ErhI	CCWWGG	2 cut(s)	902, 1555
FaeI	CATG	9 cut(s)	112, 328, 351, 391, 610, 779, 1228, 1465, 1826
FalI	AAGNNNNNCTT	4 cut(s)	417, 449, 1819, 1851
FaqI	GGGAC	3 cut(s)	752, 1304, 1514
FatI	CATG	9 cut(s)	108, 324, 347, 387, 606, 775, 1224, 1461, 1822
FauI	CCCGC	1 cut(s)	896
FauNDI	CATATG	1 cut(s)	1633
Fnu4HI	GCNGC	4 cut(s)	892, 983, 1488, 1491
FokI	GGATG	3 cut(s)	919, 1026, 1628
Fsp4HI	GCNGC	4 cut(s)	892, 983, 1488, 1491
FspBI	CTAG	2 cut(s)	44, 1326
GlaI	GCGC	4 cut(s)	651, 762, 806, 1076
GluI	GCNGC	4 cut(s)	892, 983, 1488, 1491
GsaI	CCCAGC	1 cut(s)	1653
GsuI	CTGGAG	2 cut(s)	1027, 1724
HaeII	RGCGCY	1 cut(s)	1078
HaeIII	GGCC	7 cut(s)	484, 552, 878, 955, 982, 1300, 1726
HapII	CCGG	6 cut(s)	210, 594, 978, 1301, 1508, 1727
HgaI	GACGC	1 cut(s)	656
HhaI	GCGC	4 cut(s)	652, 763, 807, 1077
Hin1II	CATG	9 cut(s)	112, 328, 351, 391, 610, 779, 1228, 1465, 1826
Hin6I	GCGC	4 cut(s)	650, 761, 805, 1075
HinP1I	GCGC	4 cut(s)	650, 761, 805, 1075
HpaII	CCGG	6 cut(s)	210, 594, 978, 1301, 1508, 1727
HphI	GGTGA	4 cut(s)	587, 1105, 1780, 1895
Hpy166II	GTNNAC	3 cut(s)	342, 940, 1832
Hpy188I	TCNGA	5 cut(s)	166, 489, 615, 680, 1195
Hpy8I	GTNNAC	3 cut(s)	342, 940, 1832
Hpy99I	CGWCG	1 cut(s)	1793
HpyAV	CCTTC	5 cut(s)	610, 1084, 1156, 1434, 1724
HpyCH4III	ACNGT	5 cut(s)	318, 1389, 1528, 1738, 1756
HpyCH4IV	ACGT	3 cut(s)	197, 1140, 1272
HpyCH4V	TGCA	9 cut(s)	686, 797, 860, 1070, 1115, 1188, 1236, 1310, 1490
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1155, 1283
HpyF3I	CTNAG	8 cut(s)	165, 486, 533, 666, 950, 1362, 1721, 1863
HpySE526I	ACGT	3 cut(s)	197, 1140, 1272
Hsp92II	CATG	9 cut(s)	112, 328, 351, 391, 610, 779, 1228, 1465, 1826
HspAI	GCGC	4 cut(s)	650, 761, 805, 1075
KpnI	GGTACC	1 cut(s)	606
Kzo9I	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
LguI	GCTCTTC	1 cut(s)	1799
LmnI	GCTCC	6 cut(s)	116, 128, 457, 620, 802, 1303
Lsp1109I	GCAGC	3 cut(s)	878, 1474, 1502
LweI	GCATC	2 cut(s)	616, 1223
MaeI	CTAG	2 cut(s)	44, 1326
MaeII	ACGT	3 cut(s)	197, 1140, 1272
MaeIII	GTNAC	6 cut(s)	104, 320, 575, 745, 1682, 1783
MalI	GATC	9 cut(s)	74, 357, 470, 899, 1097, 1638, 1718, 1763, 1821
MboI	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
MflI	RGATCY	5 cut(s)	72, 355, 468, 1716, 1761
MhlI	GDGCHC	1 cut(s)	832
MlsI	TGGCCA	1 cut(s)	552
MluCI	AATT	6 cut(s)	374, 556, 930, 1261, 1428, 1851
MluNI	TGGCCA	1 cut(s)	552
MlyI	GAGTC	3 cut(s)	499, 1070, 1665
MmeI	TCCRAC	2 cut(s)	383, 1269
Mox20I	TGGCCA	1 cut(s)	552
Mph1103I	ATGCAT	1 cut(s)	1238
MroXI	GAANNNNTTC	1 cut(s)	432
MscI	TGGCCA	1 cut(s)	552
MseI	TTAA	2 cut(s)	1152, 1839
MslI	CAYNNNNRTG	2 cut(s)	1183, 1827
Msp20I	TGGCCA	1 cut(s)	552
MspA1I	CMGCKG	1 cut(s)	891
MspI	CCGG	6 cut(s)	210, 594, 978, 1301, 1508, 1727
Mva1269I	GAATGC	1 cut(s)	1471
MvaI	CCWGG	7 cut(s)	353, 833, 957, 1350, 1547, 1595, 1766
MvnI	CGCG	3 cut(s)	650, 807, 1374
MwoI	GCNNNNNNNGC	2 cut(s)	1155, 1283
NciI	CCSGG	4 cut(s)	211, 594, 595, 979
NdeI	CATATG	1 cut(s)	1633
NdeII	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
NlaIII	CATG	9 cut(s)	112, 328, 351, 391, 610, 779, 1228, 1465, 1826
NlaIV	GGNNCC	5 cut(s)	357, 604, 721, 829, 1718
NmuCI	GTSAC	4 cut(s)	320, 575, 745, 1682
NsiI	ATGCAT	1 cut(s)	1238
NspI	RCATGY	3 cut(s)	112, 328, 391
NspV	TTCGAA	1 cut(s)	261
PaeR7I	CTCGAG	1 cut(s)	1026
PagI	TCATGA	1 cut(s)	1822
PceI	AGGCCT	1 cut(s)	955
PciI	ACATGT	3 cut(s)	108, 324, 387
PciSI	GCTCTTC	1 cut(s)	1799
PcsI	WCGNNNNNNNCGW	1 cut(s)	1146
PctI	GAATGC	1 cut(s)	1471
PdmI	GAANNNNTTC	1 cut(s)	432
PfeI	GAWTC	7 cut(s)	47, 562, 588, 970, 1052, 1329, 1353
PflFI	GACNNNGTC	1 cut(s)	751
PfoI	TCCNGGA	1 cut(s)	209
PkrI	GCNGC	4 cut(s)	893, 984, 1489, 1492
PleI	GAGTC	3 cut(s)	498, 1069, 1664
PpsI	GAGTC	3 cut(s)	498, 1069, 1664
PscI	ACATGT	3 cut(s)	108, 324, 387
Psp1406I	AACGTT	1 cut(s)	197
Psp6I	CCWGG	7 cut(s)	351, 831, 955, 1348, 1545, 1593, 1764
PspEI	GGTNACC	1 cut(s)	1783
PspFI	CCCAGC	1 cut(s)	1649
PspGI	CCWGG	7 cut(s)	351, 831, 955, 1348, 1545, 1593, 1764
PspN4I	GGNNCC	5 cut(s)	357, 604, 721, 829, 1718
PspPI	GGNCC	4 cut(s)	787, 877, 980, 1832
PsrI	GAACNNNNNNTAC	2 cut(s)	164, 196
PstI	CTGCAG	1 cut(s)	1492
PstNI	CAGNNNCTG	1 cut(s)	1532
PsuI	RGATCY	5 cut(s)	72, 355, 468, 1716, 1761
PsyI	GACNNNGTC	1 cut(s)	751
RsaI	GTAC	4 cut(s)	173, 341, 604, 632
RsaNI	GTAC	4 cut(s)	172, 340, 603, 631
RseI	CAYNNNNRTG	2 cut(s)	1183, 1827
SapI	GCTCTTC	1 cut(s)	1799
SaqAI	TTAA	2 cut(s)	1152, 1839
SatI	GCNGC	4 cut(s)	892, 983, 1488, 1491
Sau3AI	GATC	9 cut(s)	72, 355, 468, 897, 1095, 1636, 1716, 1761, 1819
Sau96I	GGNCC	4 cut(s)	787, 877, 980, 1832
SchI	GAGTC	3 cut(s)	499, 1070, 1665
SduI	GDGCHC	1 cut(s)	832
SfaNI	GCATC	2 cut(s)	616, 1223
SfcI	CTRYAG	3 cut(s)	1247, 1488, 1755
Sfr274I	CTCGAG	1 cut(s)	1026
SfuI	TTCGAA	1 cut(s)	261
SinI	GGWCC	2 cut(s)	787, 1832
SlaI	CTCGAG	1 cut(s)	1026
SmaI	CCCGGG	1 cut(s)	595
SmiMI	CAYNNNNRTG	2 cut(s)	1183, 1827
SmlI	CTYRAG	1 cut(s)	1026
SmoI	CTYRAG	1 cut(s)	1026
Sse9I	AATT	6 cut(s)	374, 556, 930, 1261, 1428, 1851
SseBI	AGGCCT	1 cut(s)	955
SsiI	CCGC	5 cut(s)	807, 889, 983, 1372, 1781
SspMI	CTAG	2 cut(s)	44, 1326
StuI	AGGCCT	1 cut(s)	955
StyI	CCWWGG	2 cut(s)	902, 1555
TaaI	ACNGT	5 cut(s)	318, 1389, 1528, 1738, 1756
TaiI	ACGT	3 cut(s)	200, 1143, 1275
TaqI	TCGA	5 cut(s)	261, 690, 870, 1027, 1098
TasI	AATT	6 cut(s)	374, 556, 930, 1261, 1428, 1851
TatI	WGTACW	1 cut(s)	339
TauI	GCSGC	1 cut(s)	985
TfiI	GAWTC	7 cut(s)	47, 562, 588, 970, 1052, 1329, 1353
Tru1I	TTAA	2 cut(s)	1152, 1839
Tru9I	TTAA	2 cut(s)	1152, 1839
TscAI	CASTG	4 cut(s)	321, 998, 1342, 1363
TseFI	GTSAC	4 cut(s)	320, 575, 745, 1682
TseI	GCWGC	3 cut(s)	891, 1487, 1490
Tsp45I	GTSAC	4 cut(s)	320, 575, 745, 1682
TspDTI	ATGAA	8 cut(s)	207, 239, 792, 923, 1478, 1535, 1570, 1839
TspGWI	ACGGA	1 cut(s)	1806
TspMI	CCCGGG	1 cut(s)	593
TspRI	CASTG	4 cut(s)	321, 998, 1342, 1363
Tth111I	GACNNNGTC	1 cut(s)	751
VpaK11BI	GGWCC	2 cut(s)	787, 1832
XapI	RAATTY	2 cut(s)	374, 1851
XceI	RCATGY	3 cut(s)	112, 328, 391
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1209, 1553
XhoI	CTCGAG	1 cut(s)	1026
XmaI	CCCGGG	1 cut(s)	593
XmnI	GAANNNNTTC	1 cut(s)	432
XspI	CTAG	2 cut(s)	44, 1326
Zsp2I	ATGCAT	1 cut(s)	1238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.