AT4G12750

Williams-Beuren syndrome DDT (WSD), D-TOX E motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0007270
Physical Location & Seq
Reverse (-)
7497698 .. 7504716
7019 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G12750.1

Sequence Viewer

Length: 3354 bp
ATGAAGAGGAAATCGCCACTACAAGTTCAAGCTCTTGAGGGTTTTTATTTGGAGCAAATGTATCCGACTCCTAAGGAAATGGAGGACTTGGGGAAGTCTTTAGGGTTAACATTGAAGGAAGTACGTGGATGGTTCAAGAGAAGAAGGAGTAGAGGGAAAGGTGTAAAATCCATGGCGAATGATGGGTTGGGAGCAAAGAATCCTCAGTTATACGATAGATCCCTCATGAGGAGTTCCACATCTTCCAGATGCGTTGGAGTAGCTGTTGAGGAAAGATGTATTGTGGGAACAAGGAAGGCCAGTTGTCAAAACTTGTTGCCTTCATCACACATTTTGGCTAAAGTTTTTCGAAAGGATGGTCCATCGCTTGGTTCTGAATTTGATCATCTCCCGTCTGGAGCTCGCAAAGCTTCTTGGCTGGGCACTTCTTCTGTCGGTCAACAGAAACAGAAAGTGGCAAGAAAAAGAAAGATTTCTGAGCTGATGGATCATACCAGTCAGGATTGCATTCAAGAGAATGCTACTGTGATGAAACATGGTATTGGAAAGGGTTTGATGACTGTATGGCGTGTAATGAATCCAAACAGGAGGGATGTATCTCCTTGCGTTGATTTATTGGATGAAAGAGCTACATTACCTCAAAGCTCAGCACGTAATCCCCCACATCAAAAGAAAAAGCAAAGACAATTAGCATCAATACTGAAGCAGAAACTGTTGCAGAAGAGGTCGACAGAAAAGAAGAGGCGTTCTATACATAGAGAGGCGGAATTAAACAAAGATGAAACTCAGAGAGAATTTAAAGAAAACTGTGAGCTTGCCGCGGACGGGGAGGTATTTAAAGAAACCTGCCAGACAATTTCGACACTAGTGGATGACGAGGAATTAGAGATGCGTGAGCGACATGAGCGAGGAAATCCGTTGACATGTTCATGCCATCATCCTAGTAGTGGATCTCATGGTTGTTTTCTTTGCAAAGATTTATTGCCCAAGTTTCCCCCAAACTCTGTTCAGATGAGGATGCCTTTTGGTTTGCATCCATGGAATTCTTCTCCAGAGTCTGTTAAGAAACTGTTTAAGGTTGTCCATTTCCTATATACTTATTCAGTAACTCTTGACATAGGTCCTTTTACACTAGACGAGTTCACGCGGGCATTTCACGATAAGGATTCCTTGCTCCTTGGTAAAATTCATCTTTCCCTGCTGAAGCTGCTTTTGCTTGATGTTGAAACCGAGCTGGAAAGGGGATCTTTTTCAAACTTGAGTATATCATGCAAGTTTCTAGCCCTGCTTCAGTCGGTTGAGAGCCAAATTCTTATTCTTGATATGTGGAGAAATTCATTAAATTCTCTTACATGGACGGAACTATTGCGGCAGATATTGGTTGCCGCTGGTTATGGTTCATTGAAGTGTGCTGTTCAATCAGAAGAACTAAGTAAGGAAAGGAAACTCATGAAAAAGTATGGCCTTCGTCTTGGAACGTTAAAGGGTGAATTATTTAGAATGCTTAATGGGCAAGGCAATAATGGCTTGAAAATATCCGAGTTAGCCGATGCTCCAGAGGTTGCTGTGCTAAATCTTGCAACTGTACCAGAAGAACGAGAGAATTCAATATGTTCAACTCTAGCAAGTGATATTACATTATTCGAAAAGATATCAGAATCAACGTATCGTGTACGTGTTAATTGTTTCTCTGAGGACCCTGACAAGAGCCAGTCTGATTCGGACGACTCCGGGAGTGTTGATGATGAATCTGATGATTGCTCAATTAGTTCTGGTGATGAAATTGAACATGTTTCAGAAAATCCTGCACTTCGAAAAGTTAAGTGTAGGAAAAGGCGGAAGCATAAAAGTAAAATGCGGGAAGTATGTAGTGAGATTGATGAAAGCCATCCCGGAGAACCATGGCTGTTGGGGCTAATGGAAGGCGAATATTCAGACCTAAGCGTTGAAGAGAAGTTAGATGTTTTTGTGGCTTTGATTGATCTTCTTAGTTCTGGTTCCACTATCAGAATGGAGGATCTACCGAGAGCTGTGGCTGACTGTGCCCCTAGTATCTATAGTCATGGTTCTGGTGGAAAAATTAAGCGATCCTCCTCTAATCAGTACAGCTATCCACGTGGATCATGGGTCCATGGAGGAGAGCTTTATGGAATAAAAGCACTATCTAAATCGTCTGATTCTCATCCAGTTGATTCTTCATCAATTGTGGGGGCATTTGCAAAGCTGGCTGGAAATAGAGCGAATAATGTTCACCCTATGCAATCTGTGTACCTTGGTTCTGATCGAAGGTTCAACAGGTACTGGCTTTTCTTAGGCACATGCAATGCAAATGACCCTGGTCATAGGTGTGTGTTCTTTGAATCTTCTGAAGATGGTCATTGGGAAGTTATCAACAACAAGGAGGCTTTGCGGGCGCTGTTGTCAGTTTTGGACGATAGGGGCAGACGGGAAGCTCGTCTTATTGAGTCGTTGGAGAAACGAGAAAGTTTTCTTTGTCAAGCCATGCTGAGTAGACAGGTGACCCAGTCGGAGACAGCCCATTTCACAGATATAGTTAGAGAGGACAGTTCTTCACCTGTTTCTGATATAGACAACAACCTATGTCTGAATGAAATTGCCAATGATCAATTCTCCTCGCAACATGCGGCTATAGTATTTGAGATTGGAAGTAAGCGGGAGAAAAGCTTATTGTGGAGCCTTATTCAGGAATTTGATGATTGGATATGGGCAAATTTTAATTTTAATCTCAATTCTGTTAAACACCGCCGAAGATCCTACCTTGATTCACTTACTAGGTGTAAGAGTTGCCATGATTTGTATTGGAGAGATGAGAAGCACTGTAAGATTTGCCATGCCACGTTTGAGGTTGATATAGATCTTGAAGAAAGATATGCGATTCATGCGGCCACATGTATGAGGAAAGAAGAGTGTGATACATTTCCGGATCATAAAGTTCTATCTTCCCAGTTGCAATCACTAAAAGCTGCAGTATATGCCATTGAGTCTGCTATGCCTGAAGATGCCTTGATTGGTGCATGGAGAAAGTCAGCTCATAGGTTATGGGCGAAAAGACTTCGGCGAAGCTCATCTGTGTCTGAAATTACGCAGGTGATTGGCGACTTTGTTGGGGCAATCAATGAAGAATGGCTATGGCACTGTAGTGATCAAGGGCAGACTTTAATGGGAGAAATCATAAATTGCTTCCCTTCGATGCCTCAAACAACTTCTGCGATTGCTCTCTGGTTGGTAAAATTGGATACCTTGATTGCTCCCTATGTCGAAAAAGCTCCACCTGAAAGGGATCAACCGTTGTGCAGGACCAGAAATACAAGTAGACGAGCGTCTAAGCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT Homeobox WHIM1 WSD

Protein Analysis

1117

Amino Acids

126.34

Weight (kDa)

8.15

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 5 - 53 6.8e-10 Homeodomain
DDT PF02791 352 - 405 3.2e-12 DDT domain
HARE-HTH PF05066 492 - 559 1.2e-09 HB1, ASXL, restriction endonuclease HTH domain
WHIM1 PF15612 630 - 671 6.9e-10 WSTF, HB1, Itc1p, MBD9 motif 1
WSD PF15613 754 - 827 4.6e-21 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3097
Acc36I ACCTGC 2 cut(s) 854, 3097
AccB7I CCANNNNNTGG 1 cut(s) 368
AccI GTMKAC 3 cut(s) 728, 2512, 3334
AccII CGCG 2 cut(s) 821, 1147
AccIII TCCGGA 1 cut(s) 2941
AclI AACGTT 1 cut(s) 1478
AcoI YGGCCR 1 cut(s) 2904
AcuI CTGAAG 5 cut(s) 722, 1223, 1274, 2388, 3036
AcvI CACGTG 1 cut(s) 2117
AfaI GTAC 6 cut(s) 123, 1587, 1674, 2105, 2270, 2300
AfiI CCNNNNNNNGG 5 cut(s) 228, 368, 825, 947, 2704
AflIII ACRYGT 4 cut(s) 923, 1675, 1789, 2909
AhlI ACTAGT 1 cut(s) 865
AjnI CCWGG 1 cut(s) 2335
AjuI GAANNNNNNNTTGG 6 cut(s) 170, 202, 1299, 1331, 2612, 2644
AleI CACNNNNGTG 1 cut(s) 3159
Alw21I GWGCWC 1 cut(s) 403
Alw26I GTCTC 1 cut(s) 2525
AlwNI CAGNNNCTG 3 cut(s) 712, 1058, 2301
Aor13HI TCCGGA 1 cut(s) 2941
AoxI GGCC 3 cut(s) 297, 1462, 2904
ApeKI GCWGC 2 cut(s) 1207, 2984
ArsI GACNNNNNNTTYG 2 cut(s) 343, 375
Asp700I GAANNNNTTC 2 cut(s) 472, 2487
AspLEI GCGC 1 cut(s) 2416
AspS9I GGNCC 5 cut(s) 359, 1121, 1696, 2128, 3318
AsuC2I CCSGG 2 cut(s) 1732, 1893
AsuHPI GGTGA 6 cut(s) 1499, 1787, 2243, 2530, 2565, 3121
AsuII TTCGAA 3 cut(s) 349, 1644, 1813
AvaII GGWCC 5 cut(s) 359, 1121, 1696, 2128, 3318
AxyI CCTNAGG 1 cut(s) 72
BaeGI GKGCMC 2 cut(s) 425, 2047
BanII GRGCYC 1 cut(s) 403
BbrPI CACGTG 1 cut(s) 2117
Bbv12I GWGCWC 1 cut(s) 403
BbvI GCAGC 2 cut(s) 1194, 2971
BccI CCATC 8 cut(s) 123, 176, 350, 370, 478, 942, 1896, 2366
BciT130I CCWGG 1 cut(s) 2337
BciVI GTATCC 2 cut(s) 72, 3250
BclI TGATCA 3 cut(s) 382, 2623, 3163
BcnI CCSGG 2 cut(s) 1732, 1893
BcoDI GTCTC 1 cut(s) 2525
BcuI ACTAGT 1 cut(s) 865
BfaI CTAG 7 cut(s) 866, 942, 1133, 1280, 1622, 2049, 2793
BfmI CTRYAG 4 cut(s) 2056, 2649, 2985, 3157
BfoI RGCGCY 1 cut(s) 2417
BfuAI ACCTGC 2 cut(s) 854, 3097
BfuI GTATCC 2 cut(s) 72, 3250
BglII AGATCT 1 cut(s) 2875
BisI GCNGC 7 cut(s) 819, 1208, 1370, 1386, 2646, 2904, 2985
BlpI GCTNAGC 1 cut(s) 646
BlsI GCNGC 7 cut(s) 820, 1209, 1371, 1387, 2647, 2905, 2986
Bme1390I CCNGG 3 cut(s) 1732, 1893, 2337
Bme18I GGWCC 5 cut(s) 359, 1121, 1696, 2128, 3318
BmgT120I GGNCC 5 cut(s) 359, 1121, 1696, 2128, 3318
BmiI GGNNCC 4 cut(s) 1698, 1999, 2129, 2696
BmrFI CCNGG 3 cut(s) 1732, 1893, 2337
BmrI ACTGGG 2 cut(s) 2518, 2959
BmsI GCATC 8 cut(s) 239, 701, 879, 1008, 1042, 1540, 3010, 3201
BmuI ACTGGG 2 cut(s) 2518, 2959
BoxI GACNNNNGTC 3 cut(s) 1119, 2337, 3340
BpmI CTGGAG 3 cut(s) 417, 1035, 1539
Bpu10I CCTNAGC 1 cut(s) 1940
Bpu1102I GCTNAGC 1 cut(s) 646
Bpu14I TTCGAA 3 cut(s) 349, 1644, 1813
BpuEI CTTGAG 2 cut(s) 56, 1279
BpuMI CCSGG 2 cut(s) 1732, 1893
BsaAI YACGTR 4 cut(s) 125, 653, 1676, 2117
BsaBI GATNNNNATC 2 cut(s) 2181, 2874
BsaJI CCNNGG 8 cut(s) 171, 819, 1037, 1177, 1901, 2131, 2272, 2335
BsaWI WCCGGW 1 cut(s) 2941
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 249, 279
Bsc4I CCNNNNNNNGG 5 cut(s) 228, 368, 825, 947, 2704
Bse1I ACTGG 7 cut(s) 300, 495, 1711, 2186, 2306, 2524, 2965
Bse21I CCTNAGG 1 cut(s) 72
Bse3DI GCAATG 1 cut(s) 2329
Bse8I GATNNNNATC 2 cut(s) 2181, 2874
BseAI TCCGGA 1 cut(s) 2941
BseBI CCWGG 1 cut(s) 2337
BseDI CCNNGG 8 cut(s) 171, 819, 1037, 1177, 1901, 2131, 2272, 2335
BseJI GATNNNNATC 2 cut(s) 2181, 2874
BseLI CCNNNNNNNGG 5 cut(s) 228, 368, 825, 947, 2704
BseMI GCAATG 1 cut(s) 2329
BseMII CTCAG 6 cut(s) 218, 468, 660, 800, 1683, 2498
BseNI ACTGG 7 cut(s) 300, 495, 1711, 2186, 2306, 2524, 2965
BseRI GAGGAG 4 cut(s) 244, 2083, 2151, 2623
BseSI GKGCMC 2 cut(s) 425, 2047
BseXI GCAGC 2 cut(s) 1194, 2971
BseYI CCCAGC 1 cut(s) 418
BsgI GTGCAG 2 cut(s) 1791, 3334
Bsh1236I CGCG 2 cut(s) 821, 1147
BshFI GGCC 3 cut(s) 299, 1464, 2906
BsiHKAI GWGCWC 1 cut(s) 403
BsiSI CCGG 3 cut(s) 1731, 1893, 2942
BslI CCNNNNNNNGG 5 cut(s) 228, 368, 825, 947, 2704
BsmAI GTCTC 1 cut(s) 2525
BsmI GAATGC 3 cut(s) 507, 523, 1506
BsnI GGCC 3 cut(s) 299, 1464, 2906
Bsp119I TTCGAA 3 cut(s) 349, 1644, 1813
Bsp1286I GDGCHC 3 cut(s) 403, 425, 2047
Bsp13I TCCGGA 1 cut(s) 2941
Bsp1720I GCTNAGC 1 cut(s) 646
Bsp19I CCATGG 4 cut(s) 171, 1037, 1901, 2131
BspANI GGCC 3 cut(s) 299, 1464, 2906
BspCNI CTCAG 6 cut(s) 217, 469, 659, 799, 1684, 2499
BspEI TCCGGA 1 cut(s) 2941
BspFNI CGCG 2 cut(s) 821, 1147
BspHI TCATGA 2 cut(s) 225, 1449
BspLI GGNNCC 4 cut(s) 1698, 1999, 2129, 2696
BspMAI CTGCAG 1 cut(s) 2989
BspMI ACCTGC 2 cut(s) 854, 3097
BspT104I TTCGAA 3 cut(s) 349, 1644, 1813
BsrDI GCAATG 1 cut(s) 2329
BsrI ACTGG 7 cut(s) 300, 495, 1711, 2186, 2306, 2524, 2965
BssECI CCNNGG 8 cut(s) 171, 819, 1037, 1177, 1901, 2131, 2272, 2335
BssT1I CCWWGG 6 cut(s) 171, 1037, 1177, 1901, 2131, 2272
Bst2UI CCWGG 1 cut(s) 2337
Bst6I CTCTTC 4 cut(s) 716, 734, 1944, 2919
BstAPI GCANNNNNTGC 1 cut(s) 2993
BstBAI YACGTR 4 cut(s) 125, 653, 1676, 2117
BstBI TTCGAA 3 cut(s) 349, 1644, 1813
BstC8I GCNNGC 5 cut(s) 403, 816, 1149, 2226, 2412
BstDSI CCRYGG 5 cut(s) 171, 819, 1037, 1901, 2131
BstEII GGTNACC 1 cut(s) 2518
BstENI CCTNNNNNAGG 1 cut(s) 2702
BstFNI CGCG 2 cut(s) 821, 1147
BstH2I RGCGCY 1 cut(s) 2417
BstHHI GCGC 1 cut(s) 2416
BstMAI GTCTC 1 cut(s) 2525
BstNI CCWGG 1 cut(s) 2337
BstNSI RCATGY 5 cut(s) 927, 1793, 2322, 2645, 2913
BstPAI GACNNNNGTC 3 cut(s) 1119, 2337, 3340
BstPI GGTNACC 1 cut(s) 2518
BstSCI CCNGG 3 cut(s) 1730, 1891, 2335
BstSFI CTRYAG 4 cut(s) 2056, 2649, 2985, 3157
BstSLI GKGCMC 2 cut(s) 425, 2047
BstUI CGCG 2 cut(s) 821, 1147
BstV1I GCAGC 2 cut(s) 1194, 2971
BstX2I RGATCY 6 cut(s) 218, 950, 1244, 2017, 2771, 2875
BstYI RGATCY 6 cut(s) 218, 950, 1244, 2017, 2771, 2875
Bsu36I CCTNAGG 1 cut(s) 72
BsuI GTATCC 2 cut(s) 72, 3250
BsuRI GGCC 3 cut(s) 299, 1464, 2906
BtgI CCRYGG 5 cut(s) 171, 819, 1037, 1901, 2131
BtgZI GCGATG 1 cut(s) 348
BtsIMutI CAGTG 2 cut(s) 2836, 3154
BveI ACCTGC 2 cut(s) 854, 3097
Cac8I GCNNGC 5 cut(s) 403, 816, 1149, 2226, 2412
CaiI CAGNNNCTG 3 cut(s) 712, 1058, 2301
CciI TCATGA 2 cut(s) 225, 1449
CfoI GCGC 1 cut(s) 2416
Cfr13I GGNCC 5 cut(s) 359, 1121, 1696, 2128, 3318
Cfr42I CCGCGG 1 cut(s) 822
CseI GACGC 1 cut(s) 3330
Csp6I GTAC 6 cut(s) 122, 1586, 1673, 2104, 2269, 2299
CviQI GTAC 6 cut(s) 122, 1586, 1673, 2104, 2269, 2299
DraI TTTAAA 2 cut(s) 799, 838
EaeI YGGCCR 1 cut(s) 2904
Eam1104I CTCTTC 4 cut(s) 716, 734, 1944, 2919
EarI CTCTTC 4 cut(s) 716, 734, 1944, 2919
EciI GGCGGA 2 cut(s) 779, 1852
Ecl136II GAGCTC 1 cut(s) 401
Eco130I CCWWGG 6 cut(s) 171, 1037, 1177, 1901, 2131, 2272
Eco24I GRGCYC 1 cut(s) 403
Eco32I GATATC 1 cut(s) 1653
Eco47I GGWCC 5 cut(s) 359, 1121, 1696, 2128, 3318
Eco53kI GAGCTC 1 cut(s) 401
Eco57I CTGAAG 5 cut(s) 722, 1223, 1274, 2388, 3036
Eco72I CACGTG 1 cut(s) 2117
Eco81I CCTNAGG 1 cut(s) 72
Eco91I GGTNACC 1 cut(s) 2518
EcoICRI GAGCTC 1 cut(s) 401
EcoNI CCTNNNNNAGG 1 cut(s) 2702
EcoO109I RGGNCCY 2 cut(s) 1121, 1696
EcoO65I GGTNACC 1 cut(s) 2518
EcoRI GAATTC 2 cut(s) 1042, 1603
EcoRII CCWGG 1 cut(s) 2335
EcoRV GATATC 1 cut(s) 1653
EcoT14I CCWWGG 6 cut(s) 171, 1037, 1177, 1901, 2131, 2272
EcoT38I GRGCYC 1 cut(s) 403
ErhI CCWWGG 6 cut(s) 171, 1037, 1177, 1901, 2131, 2272
FalI AAGNNNNNCTT 6 cut(s) 1154, 1186, 1231, 1263, 2442, 2474
FauI CCCGC 4 cut(s) 1140, 1851, 2403, 2667
FbaI TGATCA 3 cut(s) 382, 2623, 3163
FblI GTMKAC 3 cut(s) 728, 2512, 3334
Fnu4HI GCNGC 7 cut(s) 819, 1208, 1370, 1386, 2646, 2904, 2985
FriOI GRGCYC 1 cut(s) 403
Fsp4HI GCNGC 7 cut(s) 819, 1208, 1370, 1386, 2646, 2904, 2985
FspBI CTAG 7 cut(s) 866, 942, 1133, 1280, 1622, 2049, 2793
GlaI GCGC 1 cut(s) 2415
GluI GCNGC 7 cut(s) 819, 1208, 1370, 1386, 2646, 2904, 2985
GsaI CCCAGC 1 cut(s) 422
GsuI CTGGAG 3 cut(s) 417, 1035, 1539
HaeII RGCGCY 1 cut(s) 2417
HaeIII GGCC 3 cut(s) 299, 1464, 2906
HapII CCGG 3 cut(s) 1731, 1893, 2942
HgaI GACGC 1 cut(s) 3330
HhaI GCGC 1 cut(s) 2416
Hin6I GCGC 1 cut(s) 2414
HinP1I GCGC 1 cut(s) 2414
HincII GTYRAC 4 cut(s) 108, 440, 729, 921
HindII GTYRAC 4 cut(s) 108, 440, 729, 921
HindIII AAGCTT 2 cut(s) 408, 2683
HpaI GTTAAC 1 cut(s) 108
HpaII CCGG 3 cut(s) 1731, 1893, 2942
HphI GGTGA 6 cut(s) 1499, 1787, 2243, 2530, 2565, 3121
HpyAV CCTTC 8 cut(s) 109, 138, 289, 330, 1475, 1916, 2280, 3216
HpyCH4IV ACGT 7 cut(s) 124, 652, 1478, 1664, 1675, 2116, 2858
HpySE526I ACGT 7 cut(s) 124, 652, 1478, 1664, 1675, 2116, 2858
HspAI GCGC 1 cut(s) 2414
Kpn2I TCCGGA 1 cut(s) 2941
Ksp22I TGATCA 3 cut(s) 382, 2623, 3163
KspAI GTTAAC 1 cut(s) 108
KspI CCGCGG 1 cut(s) 822
LmnI GCTCC 8 cut(s) 52, 191, 398, 1179, 1558, 2694, 3274, 3292
Lsp1109I GCAGC 2 cut(s) 1194, 2971
LweI GCATC 8 cut(s) 239, 701, 879, 1008, 1042, 1540, 3010, 3201
MaeI CTAG 7 cut(s) 866, 942, 1133, 1280, 1622, 2049, 2793
MaeII ACGT 7 cut(s) 124, 652, 1478, 1664, 1675, 2116, 2858
MaeIII GTNAC 2 cut(s) 1105, 2518
MfeI CAATTG 1 cut(s) 2202
MflI RGATCY 6 cut(s) 218, 950, 1244, 2017, 2771, 2875
MhlI GDGCHC 3 cut(s) 403, 425, 2047
MlyI GAGTC 5 cut(s) 61, 1064, 1721, 2474, 3011
MmeI TCCRAC 4 cut(s) 89, 235, 2451, 2508
MroI TCCGGA 1 cut(s) 2941
MroXI GAANNNNTTC 2 cut(s) 472, 2487
MslI CAYNNNNRTG 5 cut(s) 928, 1405, 2346, 2912, 3159
MspA1I CMGCKG 2 cut(s) 821, 1388
MspI CCGG 3 cut(s) 1731, 1893, 2942
MspR9I CCNGG 3 cut(s) 1732, 1893, 2337
MunI CAATTG 1 cut(s) 2202
Mva1269I GAATGC 3 cut(s) 507, 523, 1506
MvaI CCWGG 1 cut(s) 2337
MvnI CGCG 2 cut(s) 821, 1147
NciI CCSGG 2 cut(s) 1732, 1893
NcoI CCATGG 4 cut(s) 171, 1037, 1901, 2131
NlaIV GGNNCC 4 cut(s) 1698, 1999, 2129, 2696
NmuCI GTSAC 1 cut(s) 2518
NspI RCATGY 5 cut(s) 927, 1793, 2322, 2645, 2913
NspV TTCGAA 3 cut(s) 349, 1644, 1813
OliI CACNNNNGTG 1 cut(s) 3159
PagI TCATGA 2 cut(s) 225, 1449
PaqCI CACCTGC 1 cut(s) 3097
PciI ACATGT 3 cut(s) 923, 1789, 2909
PcsI WCGNNNNNNNCGW 1 cut(s) 2452
PctI GAATGC 3 cut(s) 507, 523, 1506
PdmI GAANNNNTTC 2 cut(s) 472, 2487
PflFI GACNNNGTC 1 cut(s) 2524
PflMI CCANNNNNTGG 1 cut(s) 368
PfoI TCCNGGA 2 cut(s) 1730, 1891
PkrI GCNGC 7 cut(s) 820, 1209, 1371, 1387, 2647, 2905, 2986
PleI GAGTC 5 cut(s) 61, 1063, 1721, 2473, 3010
PmaCI CACGTG 1 cut(s) 2117
PmlI CACGTG 1 cut(s) 2117
PpsI GAGTC 5 cut(s) 61, 1063, 1721, 2473, 3010
Ppu21I YACGTR 4 cut(s) 125, 653, 1676, 2117
PpuMI RGGWCCY 2 cut(s) 1121, 1696
PscI ACATGT 3 cut(s) 923, 1789, 2909
PshAI GACNNNNGTC 3 cut(s) 1119, 2337, 3340
Psp124BI GAGCTC 1 cut(s) 403
Psp1406I AACGTT 1 cut(s) 1478
Psp5II RGGWCCY 2 cut(s) 1121, 1696
Psp6I CCWGG 1 cut(s) 2335
PspCI CACGTG 1 cut(s) 2117
PspEI GGTNACC 1 cut(s) 2518
PspFI CCCAGC 1 cut(s) 418
PspGI CCWGG 1 cut(s) 2335
PspN4I GGNNCC 4 cut(s) 1698, 1999, 2129, 2696
PspPI GGNCC 5 cut(s) 359, 1121, 1696, 2128, 3318
PspPPI RGGWCCY 2 cut(s) 1121, 1696
PstI CTGCAG 1 cut(s) 2989
PstNI CAGNNNCTG 3 cut(s) 712, 1058, 2301
PsuI RGATCY 6 cut(s) 218, 950, 1244, 2017, 2771, 2875
PsyI GACNNNGTC 1 cut(s) 2524
RsaI GTAC 6 cut(s) 123, 1587, 1674, 2105, 2270, 2300
RsaNI GTAC 6 cut(s) 122, 1586, 1673, 2104, 2269, 2299
RseI CAYNNNNRTG 5 cut(s) 928, 1405, 2346, 2912, 3159
SacI GAGCTC 1 cut(s) 403
SacII CCGCGG 1 cut(s) 822
SalI GTCGAC 1 cut(s) 727
SatI GCNGC 7 cut(s) 819, 1208, 1370, 1386, 2646, 2904, 2985
Sau96I GGNCC 5 cut(s) 359, 1121, 1696, 2128, 3318
SchI GAGTC 5 cut(s) 61, 1064, 1721, 2474, 3011
ScrFI CCNGG 3 cut(s) 1732, 1893, 2337
SduI GDGCHC 3 cut(s) 403, 425, 2047
SfaNI GCATC 8 cut(s) 239, 701, 879, 1008, 1042, 1540, 3010, 3201
SfcI CTRYAG 4 cut(s) 2056, 2649, 2985, 3157
Sfr303I CCGCGG 1 cut(s) 822
SfuI TTCGAA 3 cut(s) 349, 1644, 1813
SgrBI CCGCGG 1 cut(s) 822
SinI GGWCC 5 cut(s) 359, 1121, 1696, 2128, 3318
SmiMI CAYNNNNRTG 5 cut(s) 928, 1405, 2346, 2912, 3159
SmlI CTYRAG 2 cut(s) 35, 1258
SmoI CTYRAG 2 cut(s) 35, 1258
SpeI ACTAGT 1 cut(s) 865
SspI AATATT 1 cut(s) 1931
SspMI CTAG 7 cut(s) 866, 942, 1133, 1280, 1622, 2049, 2793
SstI GAGCTC 1 cut(s) 403
StyD4I CCNGG 3 cut(s) 1730, 1891, 2335
StyI CCWWGG 6 cut(s) 171, 1037, 1177, 1901, 2131, 2272
TaiI ACGT 7 cut(s) 127, 655, 1481, 1667, 1678, 2119, 2861
TaqI TCGA 8 cut(s) 349, 728, 860, 1644, 1813, 2284, 3209, 3279
TaqII GACCGA 1 cut(s) 425
TatI WGTACW 1 cut(s) 2103
TauI GCSGC 5 cut(s) 821, 1372, 1388, 2648, 2906
TscAI CASTG 2 cut(s) 2843, 3161
TseFI GTSAC 1 cut(s) 2518
TseI GCWGC 2 cut(s) 1207, 2984
Tsp45I GTSAC 1 cut(s) 2518
TspGWI ACGGA 2 cut(s) 906, 1373
TspRI CASTG 2 cut(s) 2843, 3161
Tth111I GACNNNGTC 1 cut(s) 2524
Van91I CCANNNNNTGG 1 cut(s) 368
VpaK11BI GGWCC 5 cut(s) 359, 1121, 1696, 2128, 3318
XagI CCTNNNNNAGG 1 cut(s) 2702
XceI RCATGY 5 cut(s) 927, 1793, 2322, 2645, 2913
XcmI CCANNNNNNNNNTGG 2 cut(s) 2008, 2121
XmiI GTMKAC 3 cut(s) 728, 2512, 3334
XmnI GAANNNNTTC 2 cut(s) 472, 2487
XspI CTAG 7 cut(s) 866, 942, 1133, 1280, 1622, 2049, 2793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.