WSTF, HB1, Itc1p, MBD9 motif 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12750 |
| fragaria_vesca | FvH4_6g36260 FvH4_6g36260 FvH4_6g36260 |
| malus_domestica | MD09G1170800.v1.1 MD17G1156400.v1.1 |
| prunus_persica | Prupe.3G029400_v2.0.a1 Prupe.3G029400_v2.0.a1 Prupe.3G029400_v2.0.a1 Prupe.3G029400_v2.0.a1 Prupe.3G029400_v2.0.a1 Prupe.3G029400_v2.0.a1 |
| pyrus_communis | pycom09g08850 pycom17g14940 |
| rosa_chinensis | RchiOBHm_Chr2g0148261 |
| rosa_laevigata | RLG00000020330 |
| rosa_multiflora | Rmu_sc0003937.1_g000002 Rmu_sc0015553.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00098960 |
| rosa_rugosa | Rorug02G0405100 |
| rosa_samantha | Rh2AG463700 Rh2BG476800 Rh2CG450500 Rh2DG485500 |
| rosa_wichuraiana | Rw2G037800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3456 |
| Acc36I | ACCTGC | 2 cut(s) | 37, 133 |
| AccB1I | GGYRCC | 1 cut(s) | 3404 |
| AccBSI | CCGCTC | 1 cut(s) | 243 |
| AccI | GTMKAC | 1 cut(s) | 2874 |
| AccII | CGCG | 2 cut(s) | 40, 886 |
| AciI | CCGC | 7 cut(s) | 241, 386, 1463, 1619, 1818, 2420, 3392 |
| AcoI | YGGCCR | 3 cut(s) | 238, 837, 1218 |
| AcuI | CTGAAG | 9 cut(s) | 1457, 1977, 2415, 2613, 2682, 2889, 3312, 3486, 3495 |
| AcyI | GRCGYC | 1 cut(s) | 3405 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 389, 2049, 2244, 2611, 2915 |
| AflIII | ACRYGT | 1 cut(s) | 3175 |
| AjnI | CCWGG | 6 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760 |
| AleI | CACNNNNGTG | 1 cut(s) | 1159 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2910, 2942 |
| Alw21I | GWGCWC | 5 cut(s) | 547, 613, 679, 745, 1166 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1955, 2867 |
| Ama87I | CYCGRG | 1 cut(s) | 59 |
| AoxI | GGCC | 8 cut(s) | 238, 837, 1218, 1428, 1678, 2578, 2602, 2715 |
| ApaI | GGGCCC | 1 cut(s) | 2582 |
| ApeKI | GCWGC | 6 cut(s) | 116, 119, 1252, 2004, 2289, 3260 |
| AseI | ATTAAT | 2 cut(s) | 519, 1914 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 365, 1069, 1304 |
| AspLEI | GCGC | 2 cut(s) | 3407, 3423 |
| AspS9I | GGNCC | 8 cut(s) | 380, 1429, 1678, 2365, 2578, 2579, 2716, 3229 |
| AsuC2I | CCSGG | 1 cut(s) | 2831 |
| AsuHPI | GGTGA | 9 cut(s) | 227, 857, 1699, 2000, 2408, 2801, 2850, 3352, 3541 |
| AsuII | TTCGAA | 1 cut(s) | 3617 |
| AvaI | CYCGRG | 1 cut(s) | 59 |
| AvaII | GGWCC | 3 cut(s) | 380, 2365, 3229 |
| BaeGI | GKGCMC | 2 cut(s) | 424, 2582 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 864, 897 |
| BalI | TGGCCA | 2 cut(s) | 839, 1220 |
| BamHI | GGATCC | 4 cut(s) | 1478, 2234, 2254, 2976 |
| BanI | GGYRCC | 1 cut(s) | 3404 |
| BanII | GRGCYC | 2 cut(s) | 2582, 3571 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1903, 1935 |
| BbsI | GAAGAC | 3 cut(s) | 29, 1965, 2853 |
| Bbv12I | GWGCWC | 5 cut(s) | 547, 613, 679, 745, 1166 |
| BbvI | GCAGC | 6 cut(s) | 103, 106, 1239, 2016, 2301, 3247 |
| BccI | CCATC | 6 cut(s) | 10, 371, 994, 2149, 2630, 3416 |
| BceAI | ACGGC | 3 cut(s) | 253, 1322, 3362 |
| BciT130I | CCWGG | 6 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762 |
| BciVI | GTATCC | 2 cut(s) | 96, 3608 |
| BclI | TGATCA | 1 cut(s) | 2818 |
| BcnI | CCSGG | 1 cut(s) | 2831 |
| BfaI | CTAG | 5 cut(s) | 810, 1742, 1832, 2423, 3017 |
| BfmI | CTRYAG | 1 cut(s) | 3115 |
| BfoI | RGCGCY | 2 cut(s) | 3408, 3424 |
| BfuAI | ACCTGC | 2 cut(s) | 37, 133 |
| BfuI | GTATCC | 2 cut(s) | 96, 3608 |
| BglII | AGATCT | 1 cut(s) | 1568 |
| BisI | GCNGC | 8 cut(s) | 117, 120, 241, 1253, 1620, 2005, 2290, 3261 |
| BlpI | GCTNAGC | 2 cut(s) | 2806, 3372 |
| BlsI | GCNGC | 8 cut(s) | 118, 121, 242, 1254, 1621, 2006, 2291, 3262 |
| BmcAI | AGTACT | 1 cut(s) | 1611 |
| Bme1390I | CCNGG | 7 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762, 2831 |
| Bme18I | GGWCC | 3 cut(s) | 380, 2365, 3229 |
| BmeT110I | CYCGRG | 1 cut(s) | 59 |
| BmgT120I | GGNCC | 8 cut(s) | 380, 1429, 1678, 2365, 2578, 2579, 2716, 3229 |
| BmiI | GGNNCC | 9 cut(s) | 1072, 1480, 2236, 2256, 2366, 2580, 2978, 3230, 3406 |
| BmrFI | CCNGG | 7 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762, 2831 |
| BmrI | ACTGGG | 1 cut(s) | 2653 |
| BmsI | GCATC | 3 cut(s) | 3286, 3488, 3529 |
| BmuI | ACTGGG | 1 cut(s) | 2653 |
| BpiI | GAAGAC | 3 cut(s) | 29, 1965, 2853 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2450, 2482 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3219 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2806, 3372 |
| Bpu14I | TTCGAA | 1 cut(s) | 3617 |
| BpuEI | CTTGAG | 2 cut(s) | 341, 1365 |
| BpuMI | CCSGG | 1 cut(s) | 2831 |
| BsaAI | YACGTR | 1 cut(s) | 3491 |
| BsaHI | GRCGYC | 1 cut(s) | 3405 |
| BsaJI | CCNNGG | 6 cut(s) | 75, 1271, 2351, 2361, 2599, 3601 |
| BsaWI | WCCGGW | 1 cut(s) | 679 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2910, 2940, 3410, 3440 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 389, 2049, 2244, 2611, 2915 |
| Bse3DI | GCAATG | 7 cut(s) | 108, 1042, 1104, 1653, 2772, 3270, 3474 |
| BseBI | CCWGG | 6 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762 |
| BseDI | CCNNGG | 6 cut(s) | 75, 1271, 2351, 2361, 2599, 3601 |
| BseGI | GGATG | 6 cut(s) | 382, 1114, 1892, 2125, 2701, 3544 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 389, 2049, 2244, 2611, 2915 |
| BseMI | GCAATG | 7 cut(s) | 108, 1042, 1104, 1653, 2772, 3270, 3474 |
| BseMII | CTCAG | 3 cut(s) | 1764, 3363, 3567 |
| BseRI | GAGGAG | 3 cut(s) | 184, 187, 3431 |
| BseSI | GKGCMC | 2 cut(s) | 424, 2582 |
| BseX3I | CGGCCG | 1 cut(s) | 238 |
| BseXI | GCAGC | 6 cut(s) | 103, 106, 1239, 2016, 2301, 3247 |
| BsgI | GTGCAG | 1 cut(s) | 2522 |
| Bsh1236I | CGCG | 2 cut(s) | 40, 886 |
| Bsh1285I | CGRYCG | 1 cut(s) | 241 |
| BshFI | GGCC | 8 cut(s) | 240, 839, 1220, 1430, 1680, 2580, 2604, 2717 |
| BshNI | GGYRCC | 1 cut(s) | 3404 |
| BsiEI | CGRYCG | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 5 cut(s) | 547, 613, 679, 745, 1166 |
| BsiHKCI | CYCGRG | 1 cut(s) | 59 |
| BsiSI | CCGG | 2 cut(s) | 680, 2831 |
| BslFI | GGGAC | 1 cut(s) | 1670 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 389, 2049, 2244, 2611, 2915 |
| BsmFI | GGGAC | 1 cut(s) | 1670 |
| BsmI | GAATGC | 3 cut(s) | 113, 2203, 2282 |
| BsnI | GGCC | 8 cut(s) | 240, 839, 1220, 1430, 1680, 2580, 2604, 2717 |
| BsoBI | CYCGRG | 1 cut(s) | 59 |
| Bsp119I | TTCGAA | 1 cut(s) | 3617 |
| Bsp120I | GGGCCC | 1 cut(s) | 2578 |
| Bsp1286I | GDGCHC | 8 cut(s) | 424, 547, 613, 679, 745, 1166, 2582, 3571 |
| Bsp1407I | TGTACA | 1 cut(s) | 949 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2806, 3372 |
| Bsp68I | TCGCGA | 1 cut(s) | 886 |
| BspACI | CCGC | 7 cut(s) | 241, 386, 1463, 1619, 1818, 2420, 3392 |
| BspANI | GGCC | 8 cut(s) | 240, 839, 1220, 1430, 1680, 2580, 2604, 2717 |
| BspCNI | CTCAG | 3 cut(s) | 1765, 3364, 3568 |
| BspFNI | CGCG | 2 cut(s) | 40, 886 |
| BspHI | TCATGA | 2 cut(s) | 1390, 3085 |
| BspLI | GGNNCC | 9 cut(s) | 1072, 1480, 2236, 2256, 2366, 2580, 2978, 3230, 3406 |
| BspMAI | CTGCAG | 1 cut(s) | 3119 |
| BspMI | ACCTGC | 2 cut(s) | 37, 133 |
| BspQI | GCTCTTC | 1 cut(s) | 1110 |
| BspT104I | TTCGAA | 1 cut(s) | 3617 |
| BspT107I | GGYRCC | 1 cut(s) | 3404 |
| BsrBI | CCGCTC | 1 cut(s) | 243 |
| BsrDI | GCAATG | 7 cut(s) | 108, 1042, 1104, 1653, 2772, 3270, 3474 |
| BsrGI | TGTACA | 1 cut(s) | 949 |
| BssECI | CCNNGG | 6 cut(s) | 75, 1271, 2351, 2361, 2599, 3601 |
| BssNI | GRCGYC | 1 cut(s) | 3405 |
| BssT1I | CCWWGG | 2 cut(s) | 1271, 2351 |
| Bst2UI | CCWGG | 6 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762 |
| Bst4CI | ACNGT | 6 cut(s) | 784, 1305, 1994, 2101, 2814, 2893 |
| Bst6I | CTCTTC | 6 cut(s) | 161, 414, 988, 1110, 1559, 2658 |
| BstACI | GRCGYC | 1 cut(s) | 3405 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1503, 3123, 3269, 3485 |
| BstAUI | TGTACA | 1 cut(s) | 949 |
| BstBAI | YACGTR | 1 cut(s) | 3491 |
| BstBI | TTCGAA | 1 cut(s) | 3617 |
| BstC8I | GCNNGC | 6 cut(s) | 510, 792, 1218, 1377, 3270, 3612 |
| BstDEI | CTNAG | 8 cut(s) | 1664, 1773, 2285, 2806, 3219, 3350, 3372, 3576 |
| BstEII | GGTNACC | 1 cut(s) | 499 |
| BstF5I | GGATG | 6 cut(s) | 382, 1114, 1892, 2125, 2701, 3544 |
| BstFNI | CGCG | 2 cut(s) | 40, 886 |
| BstH2I | RGCGCY | 2 cut(s) | 3408, 3424 |
| BstHHI | GCGC | 2 cut(s) | 3407, 3423 |
| BstMCI | CGRYCG | 1 cut(s) | 241 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1503, 2207, 2286, 2675, 3123, 3269, 3485 |
| BstNI | CCWGG | 6 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762 |
| BstNSI | RCATGY | 4 cut(s) | 1197, 2004, 3179, 3272 |
| BstPI | GGTNACC | 1 cut(s) | 499 |
| BstSCI | CCNGG | 7 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760, 2829 |
| BstSFI | CTRYAG | 1 cut(s) | 3115 |
| BstSLI | GKGCMC | 2 cut(s) | 424, 2582 |
| BstUI | CGCG | 2 cut(s) | 40, 886 |
| BstV1I | GCAGC | 6 cut(s) | 103, 106, 1239, 2016, 2301, 3247 |
| BstV2I | GAAGAC | 3 cut(s) | 29, 1965, 2853 |
| BstX2I | RGATCY | 5 cut(s) | 1478, 1568, 2234, 2254, 2976 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 205 |
| BstYI | RGATCY | 5 cut(s) | 1478, 1568, 2234, 2254, 2976 |
| BstZI | CGGCCG | 1 cut(s) | 238 |
| BsuI | GTATCC | 2 cut(s) | 96, 3608 |
| BsuRI | GGCC | 8 cut(s) | 240, 839, 1220, 1430, 1680, 2580, 2604, 2717 |
| BtsCI | GGATG | 6 cut(s) | 382, 1114, 1892, 2125, 2701, 3544 |
| BtsI | GCAGTG | 2 cut(s) | 2014, 3112 |
| BtsIMutI | CAGTG | 8 cut(s) | 205, 555, 1154, 1999, 2014, 2106, 2641, 3112 |
| BtuMI | TCGCGA | 1 cut(s) | 886 |
| BveI | ACCTGC | 2 cut(s) | 37, 133 |
| Cac8I | GCNNGC | 6 cut(s) | 510, 792, 1218, 1377, 3270, 3612 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1955, 2867 |
| CciI | TCATGA | 2 cut(s) | 1390, 3085 |
| CfoI | GCGC | 2 cut(s) | 3407, 3423 |
| Cfr13I | GGNCC | 8 cut(s) | 380, 1429, 1678, 2365, 2578, 2579, 2716, 3229 |
| CseI | GACGC | 2 cut(s) | 1592, 1667 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1086, 1121 |
| DdeI | CTNAG | 8 cut(s) | 1664, 1773, 2285, 2806, 3219, 3350, 3372, 3576 |
| DinI | GGCGCC | 1 cut(s) | 3406 |
| EaeI | YGGCCR | 3 cut(s) | 238, 837, 1218 |
| EagI | CGGCCG | 1 cut(s) | 238 |
| Eam1104I | CTCTTC | 6 cut(s) | 161, 414, 988, 1110, 1559, 2658 |
| EarI | CTCTTC | 6 cut(s) | 161, 414, 988, 1110, 1559, 2658 |
| EclXI | CGGCCG | 1 cut(s) | 238 |
| Eco130I | CCWWGG | 2 cut(s) | 1271, 2351 |
| Eco24I | GRGCYC | 2 cut(s) | 2582, 3571 |
| Eco47I | GGWCC | 3 cut(s) | 380, 2365, 3229 |
| Eco52I | CGGCCG | 1 cut(s) | 238 |
| Eco57I | CTGAAG | 9 cut(s) | 1457, 1977, 2415, 2613, 2682, 2889, 3312, 3486, 3495 |
| Eco88I | CYCGRG | 1 cut(s) | 59 |
| Eco91I | GGTNACC | 1 cut(s) | 499 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2579, 2716, 3229 |
| EcoO65I | GGTNACC | 1 cut(s) | 499 |
| EcoRI | GAATTC | 3 cut(s) | 1556, 1752, 2029 |
| EcoRII | CCWGG | 6 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760 |
| EcoT14I | CCWWGG | 2 cut(s) | 1271, 2351 |
| EcoT22I | ATGCAT | 3 cut(s) | 1195, 2593, 3270 |
| EcoT38I | GRGCYC | 2 cut(s) | 2582, 3571 |
| EgeI | GGCGCC | 1 cut(s) | 3406 |
| EheI | GGCGCC | 1 cut(s) | 3406 |
| ErhI | CCWWGG | 2 cut(s) | 1271, 2351 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1452, 1484, 3196, 3228 |
| FaqI | GGGAC | 1 cut(s) | 1670 |
| FauI | CCCGC | 1 cut(s) | 2427 |
| FauNDI | CATATG | 2 cut(s) | 2379, 2593 |
| FbaI | TGATCA | 1 cut(s) | 2818 |
| FblI | GTMKAC | 1 cut(s) | 2874 |
| Fnu4HI | GCNGC | 8 cut(s) | 117, 120, 241, 1253, 1620, 2005, 2290, 3261 |
| FokI | GGATG | 6 cut(s) | 389, 1121, 1879, 2112, 2708, 3551 |
| FriOI | GRGCYC | 2 cut(s) | 2582, 3571 |
| Fsp4HI | GCNGC | 8 cut(s) | 117, 120, 241, 1253, 1620, 2005, 2290, 3261 |
| FspBI | CTAG | 5 cut(s) | 810, 1742, 1832, 2423, 3017 |
| GlaI | GCGC | 2 cut(s) | 3406, 3422 |
| GluI | GCNGC | 8 cut(s) | 117, 120, 241, 1253, 1620, 2005, 2290, 3261 |
| HaeII | RGCGCY | 2 cut(s) | 3408, 3424 |
| HaeIII | GGCC | 8 cut(s) | 240, 839, 1220, 1430, 1680, 2580, 2604, 2717 |
| HapII | CCGG | 2 cut(s) | 680, 2831 |
| HgaI | GACGC | 2 cut(s) | 1592, 1667 |
| HhaI | GCGC | 2 cut(s) | 3407, 3423 |
| Hin1I | GRCGYC | 1 cut(s) | 3405 |
| Hin6I | GCGC | 2 cut(s) | 3405, 3421 |
| HinP1I | GCGC | 2 cut(s) | 3405, 3421 |
| HincII | GTYRAC | 2 cut(s) | 339, 2358 |
| HindII | GTYRAC | 2 cut(s) | 339, 2358 |
| HindIII | AAGCTT | 3 cut(s) | 255, 1439, 3612 |
| HpaI | GTTAAC | 1 cut(s) | 339 |
| HpaII | CCGG | 2 cut(s) | 680, 2831 |
| HphI | GGTGA | 9 cut(s) | 227, 857, 1699, 2000, 2408, 2801, 2850, 3352, 3541 |
| Hpy99I | CGWCG | 1 cut(s) | 271 |
| HpyCH4III | ACNGT | 6 cut(s) | 784, 1305, 1994, 2101, 2814, 2893 |
| HpyCH4IV | ACGT | 5 cut(s) | 1702, 2091, 2511, 3355, 3490 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1503, 2207, 2286, 2675, 3123, 3269, 3485 |
| HpyF3I | CTNAG | 8 cut(s) | 1664, 1773, 2285, 2806, 3219, 3350, 3372, 3576 |
| HpySE526I | ACGT | 5 cut(s) | 1702, 2091, 2511, 3355, 3490 |
| Hsp92I | GRCGYC | 1 cut(s) | 3405 |
| HspAI | GCGC | 2 cut(s) | 3405, 3421 |
| KasI | GGCGCC | 1 cut(s) | 3404 |
| Ksp22I | TGATCA | 1 cut(s) | 2818 |
| KspAI | GTTAAC | 1 cut(s) | 339 |
| LguI | GCTCTTC | 1 cut(s) | 1110 |
| Lsp1109I | GCAGC | 6 cut(s) | 103, 106, 1239, 2016, 2301, 3247 |
| LweI | GCATC | 3 cut(s) | 3286, 3488, 3529 |
| MaeI | CTAG | 5 cut(s) | 810, 1742, 1832, 2423, 3017 |
| MaeII | ACGT | 5 cut(s) | 1702, 2091, 2511, 3355, 3490 |
| MaeIII | GTNAC | 8 cut(s) | 90, 499, 895, 960, 1988, 2639, 2782, 2935 |
| MbiI | CCGCTC | 1 cut(s) | 243 |
| MfeI | CAATTG | 1 cut(s) | 3273 |
| MflI | RGATCY | 5 cut(s) | 1478, 1568, 2234, 2254, 2976 |
| MhlI | GDGCHC | 8 cut(s) | 424, 547, 613, 679, 745, 1166, 2582, 3571 |
| MlsI | TGGCCA | 2 cut(s) | 839, 1220 |
| MluNI | TGGCCA | 2 cut(s) | 839, 1220 |
| Mly113I | GGCGCC | 1 cut(s) | 3405 |
| MlyI | GAGTC | 4 cut(s) | 1844, 1955, 2131, 3287 |
| Mox20I | TGGCCA | 2 cut(s) | 839, 1220 |
| Mph1103I | ATGCAT | 3 cut(s) | 1195, 2593, 3270 |
| MroXI | GAANNNNTTC | 3 cut(s) | 365, 1069, 1304 |
| MscI | TGGCCA | 2 cut(s) | 839, 1220 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1159, 2382, 2998, 3072 |
| Msp20I | TGGCCA | 2 cut(s) | 839, 1220 |
| MspA1I | CMGCKG | 1 cut(s) | 1818 |
| MspI | CCGG | 2 cut(s) | 680, 2831 |
| MspR9I | CCNGG | 7 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762, 2831 |
| MunI | CAATTG | 1 cut(s) | 3273 |
| Mva1269I | GAATGC | 3 cut(s) | 113, 2203, 2282 |
| MvaI | CCWGG | 6 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762 |
| MvnI | CGCG | 2 cut(s) | 40, 886 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1503, 2207, 2286, 2675, 3123, 3269, 3485 |
| NarI | GGCGCC | 1 cut(s) | 3405 |
| NciI | CCSGG | 1 cut(s) | 2831 |
| NdeI | CATATG | 2 cut(s) | 2379, 2593 |
| NlaIV | GGNNCC | 9 cut(s) | 1072, 1480, 2236, 2256, 2366, 2580, 2978, 3230, 3406 |
| NmuCI | GTSAC | 3 cut(s) | 90, 1988, 2639 |
| NruI | TCGCGA | 1 cut(s) | 886 |
| NsiI | ATGCAT | 3 cut(s) | 1195, 2593, 3270 |
| NspI | RCATGY | 4 cut(s) | 1197, 2004, 3179, 3272 |
| NspV | TTCGAA | 1 cut(s) | 3617 |
| OliI | CACNNNNGTG | 1 cut(s) | 1159 |
| PaeI | GCATGC | 1 cut(s) | 3272 |
| PaeR7I | CTCGAG | 1 cut(s) | 59 |
| PagI | TCATGA | 2 cut(s) | 1390, 3085 |
| PciI | ACATGT | 1 cut(s) | 3175 |
| PciSI | GCTCTTC | 1 cut(s) | 1110 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3352 |
| PctI | GAATGC | 3 cut(s) | 113, 2203, 2282 |
| PdmI | GAANNNNTTC | 3 cut(s) | 365, 1069, 1304 |
| PkrI | GCNGC | 8 cut(s) | 118, 121, 242, 1254, 1621, 2006, 2291, 3262 |
| PleI | GAGTC | 4 cut(s) | 1843, 1955, 2130, 3286 |
| PluTI | GGCGCC | 1 cut(s) | 3408 |
| PpsI | GAGTC | 4 cut(s) | 1843, 1955, 2130, 3286 |
| Ppu21I | YACGTR | 1 cut(s) | 3491 |
| PpuMI | RGGWCCY | 1 cut(s) | 3229 |
| PscI | ACATGT | 1 cut(s) | 3175 |
| PshBI | ATTAAT | 2 cut(s) | 519, 1914 |
| PsiI | TTATAA | 1 cut(s) | 3456 |
| Psp5II | RGGWCCY | 1 cut(s) | 3229 |
| Psp6I | CCWGG | 6 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760 |
| PspEI | GGTNACC | 1 cut(s) | 499 |
| PspGI | CCWGG | 6 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760 |
| PspN4I | GGNNCC | 9 cut(s) | 1072, 1480, 2236, 2256, 2366, 2580, 2978, 3230, 3406 |
| PspOMI | GGGCCC | 1 cut(s) | 2578 |
| PspPI | GGNCC | 8 cut(s) | 380, 1429, 1678, 2365, 2578, 2579, 2716, 3229 |
| PspPPI | RGGWCCY | 1 cut(s) | 3229 |
| PstI | CTGCAG | 1 cut(s) | 3119 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1955, 2867 |
| PsuI | RGATCY | 5 cut(s) | 1478, 1568, 2234, 2254, 2976 |
| RruI | TCGCGA | 1 cut(s) | 886 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1159, 2382, 2998, 3072 |
| SapI | GCTCTTC | 1 cut(s) | 1110 |
| SatI | GCNGC | 8 cut(s) | 117, 120, 241, 1253, 1620, 2005, 2290, 3261 |
| Sau96I | GGNCC | 8 cut(s) | 380, 1429, 1678, 2365, 2578, 2579, 2716, 3229 |
| ScaI | AGTACT | 1 cut(s) | 1611 |
| SchI | GAGTC | 4 cut(s) | 1844, 1955, 2131, 3287 |
| ScrFI | CCNGG | 7 cut(s) | 1032, 1707, 2130, 2362, 2601, 2762, 2831 |
| SduI | GDGCHC | 8 cut(s) | 424, 547, 613, 679, 745, 1166, 2582, 3571 |
| SfaNI | GCATC | 3 cut(s) | 3286, 3488, 3529 |
| SfcI | CTRYAG | 1 cut(s) | 3115 |
| SfoI | GGCGCC | 1 cut(s) | 3406 |
| Sfr274I | CTCGAG | 1 cut(s) | 59 |
| SfuI | TTCGAA | 1 cut(s) | 3617 |
| SinI | GGWCC | 3 cut(s) | 380, 2365, 3229 |
| SlaI | CTCGAG | 1 cut(s) | 59 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1159, 2382, 2998, 3072 |
| SmlI | CTYRAG | 3 cut(s) | 59, 356, 1380 |
| SmoI | CTYRAG | 3 cut(s) | 59, 356, 1380 |
| SphI | GCATGC | 1 cut(s) | 3272 |
| SsiI | CCGC | 7 cut(s) | 241, 386, 1463, 1619, 1818, 2420, 3392 |
| SspDI | GGCGCC | 1 cut(s) | 3404 |
| SspI | AATATT | 2 cut(s) | 2168, 3439 |
| SspMI | CTAG | 5 cut(s) | 810, 1742, 1832, 2423, 3017 |
| StyD4I | CCNGG | 7 cut(s) | 1030, 1705, 2128, 2360, 2599, 2760, 2829 |
| StyI | CCWWGG | 2 cut(s) | 1271, 2351 |
| TaaI | ACNGT | 6 cut(s) | 784, 1305, 1994, 2101, 2814, 2893 |
| TaiI | ACGT | 5 cut(s) | 1705, 2094, 2514, 3358, 3493 |
| TaqI | TCGA | 6 cut(s) | 60, 148, 162, 269, 2727, 3617 |
| TatI | WGTACW | 7 cut(s) | 616, 748, 949, 1609, 2101, 2402, 3093 |
| TauI | GCSGC | 2 cut(s) | 243, 1622 |
| TscAI | CASTG | 8 cut(s) | 205, 555, 1161, 1999, 2014, 2113, 2648, 3119 |
| TseFI | GTSAC | 3 cut(s) | 90, 1988, 2639 |
| TseI | GCWGC | 6 cut(s) | 116, 119, 1252, 2004, 2289, 3260 |
| Tsp45I | GTSAC | 3 cut(s) | 90, 1988, 2639 |
| TspGWI | ACGGA | 7 cut(s) | 78, 359, 1898, 2758, 2977, 2989, 3543 |
| TspRI | CASTG | 8 cut(s) | 205, 555, 1161, 1999, 2014, 2113, 2648, 3119 |
| VpaK11BI | GGWCC | 3 cut(s) | 380, 2365, 3229 |
| VspI | ATTAAT | 2 cut(s) | 519, 1914 |
| XceI | RCATGY | 4 cut(s) | 1197, 2004, 3179, 3272 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2136, 2358 |
| XhoI | CTCGAG | 1 cut(s) | 59 |
| XmiI | GTMKAC | 1 cut(s) | 2874 |
| XmnI | GAANNNNTTC | 3 cut(s) | 365, 1069, 1304 |
| XspI | CTAG | 5 cut(s) | 810, 1742, 1832, 2423, 3017 |
| ZrmI | AGTACT | 1 cut(s) | 1611 |
| Zsp2I | ATGCAT | 3 cut(s) | 1195, 2593, 3270 |