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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14650 |
| fragaria_vesca | FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 |
| malus_domestica | MD13G1201700.v1.1 MD16G1201900.v1.1 MD16G1202000.v1.1 |
| prunus_persica | Prupe.1G023500_v2.0.a1 Prupe.1G023500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0388601 |
| rosa_laevigata | RLG00000010035 |
| rosa_multiflora | Rmu_sc0004459.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00335060 |
| rosa_rugosa | Rorug03G0319200 Rorug03G0319200 |
| rosa_samantha | Rh4AG023600 Rh4BG016800 Rh4CG026300 Rh4DG017600 |
| rosa_wichuraiana | Rw0G009360 Rw4G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1287 |
| AarI | CACCTGC | 1 cut(s) | 569 |
| Acc36I | ACCTGC | 1 cut(s) | 569 |
| AccII | CGCG | 2 cut(s) | 215, 1596 |
| AciI | CCGC | 3 cut(s) | 213, 464, 1887 |
| AcsI | RAATTY | 3 cut(s) | 781, 850, 934 |
| AcuI | CTGAAG | 1 cut(s) | 1709 |
| AfaI | GTAC | 1 cut(s) | 1623 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| AflIII | ACRYGT | 1 cut(s) | 1452 |
| AjiI | CACGTC | 1 cut(s) | 1455 |
| AjnI | CCWGG | 1 cut(s) | 440 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 551, 583 |
| Alw21I | GWGCWC | 4 cut(s) | 50, 161, 275, 503 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 863, 947 |
| Ama87I | CYCGRG | 1 cut(s) | 1047 |
| AoxI | GGCC | 1 cut(s) | 1573 |
| ApeKI | GCWGC | 2 cut(s) | 1460, 1719 |
| ApoI | RAATTY | 3 cut(s) | 781, 850, 934 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1059, 1128 |
| AspLEI | GCGC | 1 cut(s) | 217 |
| AspS9I | GGNCC | 1 cut(s) | 700 |
| AsuHPI | GGTGA | 6 cut(s) | 251, 365, 479, 593, 1048, 1803 |
| AsuII | TTCGAA | 1 cut(s) | 687 |
| AvaI | CYCGRG | 1 cut(s) | 1047 |
| AvaII | GGWCC | 1 cut(s) | 700 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1313, 1346 |
| BanII | GRGCYC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| Bbv12I | GWGCWC | 4 cut(s) | 50, 161, 275, 503 |
| BbvI | GCAGC | 2 cut(s) | 1472, 1731 |
| BccI | CCATC | 7 cut(s) | 131, 245, 359, 587, 617, 691, 1426 |
| BciT130I | CCWGG | 1 cut(s) | 442 |
| BclI | TGATCA | 2 cut(s) | 1087, 1567 |
| BfaI | CTAG | 8 cut(s) | 167, 281, 395, 488, 509, 1539, 1560, 1733 |
| BfmI | CTRYAG | 1 cut(s) | 1458 |
| BfuAI | ACCTGC | 1 cut(s) | 569 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1217 |
| BglII | AGATCT | 2 cut(s) | 106, 484 |
| BisI | GCNGC | 2 cut(s) | 1461, 1720 |
| BlsI | GCNGC | 2 cut(s) | 1462, 1721 |
| Bme1390I | CCNGG | 1 cut(s) | 442 |
| Bme18I | GGWCC | 1 cut(s) | 700 |
| BmeT110I | CYCGRG | 1 cut(s) | 1047 |
| BmgBI | CACGTC | 1 cut(s) | 1455 |
| BmgT120I | GGNCC | 1 cut(s) | 700 |
| BmrFI | CCNGG | 1 cut(s) | 442 |
| BmrI | ACTGGG | 1 cut(s) | 1343 |
| BmsI | GCATC | 2 cut(s) | 1539, 1674 |
| BmuI | ACTGGG | 1 cut(s) | 1343 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1272 |
| Bpu14I | TTCGAA | 1 cut(s) | 687 |
| BpuEI | CTTGAG | 1 cut(s) | 368 |
| Bsa29I | ATCGAT | 2 cut(s) | 1333, 1662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 369, 1339 |
| BsaI | GGTCTC | 3 cut(s) | 203, 431, 545 |
| BsaJI | CCNNGG | 2 cut(s) | 555, 1773 |
| BsaWI | WCCGGW | 1 cut(s) | 1618 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1481 |
| Bse1I | ACTGG | 3 cut(s) | 1102, 1276, 1349 |
| Bse3DI | GCAATG | 1 cut(s) | 1896 |
| Bse8I | GATNNNNATC | 2 cut(s) | 369, 1339 |
| BseBI | CCWGG | 1 cut(s) | 442 |
| BseCI | ATCGAT | 2 cut(s) | 1333, 1662 |
| BseDI | CCNNGG | 2 cut(s) | 555, 1773 |
| BseJI | GATNNNNATC | 2 cut(s) | 369, 1339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| BseMI | GCAATG | 1 cut(s) | 1896 |
| BseMII | CTCAG | 3 cut(s) | 729, 1632, 1794 |
| BseNI | ACTGG | 3 cut(s) | 1102, 1276, 1349 |
| BseXI | GCAGC | 2 cut(s) | 1472, 1731 |
| Bsh1236I | CGCG | 2 cut(s) | 215, 1596 |
| BshFI | GGCC | 1 cut(s) | 1575 |
| BshVI | ATCGAT | 2 cut(s) | 1333, 1662 |
| BsiHKAI | GWGCWC | 4 cut(s) | 50, 161, 275, 503 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1047 |
| BsiSI | CCGG | 1 cut(s) | 1619 |
| BslFI | GGGAC | 1 cut(s) | 1064 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| BsmFI | GGGAC | 1 cut(s) | 1064 |
| BsnI | GGCC | 1 cut(s) | 1575 |
| Bso31I | GGTCTC | 3 cut(s) | 203, 431, 545 |
| BsoBI | CYCGRG | 1 cut(s) | 1047 |
| Bsp119I | TTCGAA | 1 cut(s) | 687 |
| Bsp1286I | GDGCHC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| BspACI | CCGC | 3 cut(s) | 213, 464, 1887 |
| BspANI | GGCC | 1 cut(s) | 1575 |
| BspCNI | CTCAG | 3 cut(s) | 730, 1633, 1793 |
| BspDI | ATCGAT | 2 cut(s) | 1333, 1662 |
| BspFNI | CGCG | 2 cut(s) | 215, 1596 |
| BspHI | TCATGA | 1 cut(s) | 1180 |
| BspMAI | CTGCAG | 1 cut(s) | 1462 |
| BspMI | ACCTGC | 1 cut(s) | 569 |
| BspT104I | TTCGAA | 1 cut(s) | 687 |
| BspTNI | GGTCTC | 3 cut(s) | 203, 431, 545 |
| BsrDI | GCAATG | 1 cut(s) | 1896 |
| BsrI | ACTGG | 3 cut(s) | 1102, 1276, 1349 |
| BssECI | CCNNGG | 2 cut(s) | 555, 1773 |
| BssT1I | CCWWGG | 1 cut(s) | 1773 |
| Bst2UI | CCWGG | 1 cut(s) | 442 |
| Bst4CI | ACNGT | 6 cut(s) | 835, 859, 919, 943, 1015, 1681 |
| BstBI | TTCGAA | 1 cut(s) | 687 |
| BstC8I | GCNNGC | 1 cut(s) | 1554 |
| BstDEI | CTNAG | 5 cut(s) | 738, 1319, 1577, 1641, 1780 |
| BstDSI | CCRYGG | 1 cut(s) | 555 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1479 |
| BstFNI | CGCG | 2 cut(s) | 215, 1596 |
| BstHHI | GCGC | 1 cut(s) | 217 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 717, 1217, 1485, 1878 |
| BstNI | CCWGG | 1 cut(s) | 442 |
| BstNSI | RCATGY | 2 cut(s) | 1330, 1872 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1272 |
| BstSCI | CCNGG | 1 cut(s) | 440 |
| BstSFI | CTRYAG | 1 cut(s) | 1458 |
| BstUI | CGCG | 2 cut(s) | 215, 1596 |
| BstV1I | GCAGC | 2 cut(s) | 1472, 1731 |
| BstX2I | RGATCY | 2 cut(s) | 106, 484 |
| BstYI | RGATCY | 2 cut(s) | 106, 484 |
| Bsu15I | ATCGAT | 2 cut(s) | 1333, 1662 |
| BsuRI | GGCC | 1 cut(s) | 1575 |
| BsuTUI | ATCGAT | 2 cut(s) | 1333, 1662 |
| BtgI | CCRYGG | 1 cut(s) | 555 |
| BtgZI | GCGATG | 1 cut(s) | 1611 |
| BtrI | CACGTC | 1 cut(s) | 1455 |
| BtsIMutI | CAGTG | 4 cut(s) | 864, 948, 1269, 1356 |
| BveI | ACCTGC | 1 cut(s) | 569 |
| Cac8I | GCNNGC | 1 cut(s) | 1554 |
| CaiI | CAGNNNCTG | 2 cut(s) | 863, 947 |
| CciI | TCATGA | 1 cut(s) | 1180 |
| CfoI | GCGC | 1 cut(s) | 217 |
| Cfr13I | GGNCC | 1 cut(s) | 700 |
| ClaI | ATCGAT | 2 cut(s) | 1333, 1662 |
| CseI | GACGC | 3 cut(s) | 514, 1332, 1602 |
| Csp6I | GTAC | 1 cut(s) | 1622 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 783, 818, 1647, 1682 |
| CviAII | CATG | 5 cut(s) | 1033, 1181, 1327, 1571, 1869 |
| CviQI | GTAC | 1 cut(s) | 1622 |
| DdeI | CTNAG | 5 cut(s) | 738, 1319, 1577, 1641, 1780 |
| DraI | TTTAAA | 1 cut(s) | 390 |
| Ecl136II | GAGCTC | 4 cut(s) | 48, 159, 273, 501 |
| Eco130I | CCWWGG | 1 cut(s) | 1773 |
| Eco24I | GRGCYC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| Eco31I | GGTCTC | 3 cut(s) | 203, 431, 545 |
| Eco47I | GGWCC | 1 cut(s) | 700 |
| Eco53kI | GAGCTC | 4 cut(s) | 48, 159, 273, 501 |
| Eco57I | CTGAAG | 1 cut(s) | 1709 |
| Eco88I | CYCGRG | 1 cut(s) | 1047 |
| EcoICRI | GAGCTC | 4 cut(s) | 48, 159, 273, 501 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1479 |
| EcoRI | GAATTC | 2 cut(s) | 850, 934 |
| EcoRII | CCWGG | 1 cut(s) | 440 |
| EcoT14I | CCWWGG | 1 cut(s) | 1773 |
| EcoT38I | GRGCYC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| ErhI | CCWWGG | 1 cut(s) | 1773 |
| FaeI | CATG | 5 cut(s) | 1036, 1184, 1330, 1574, 1872 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 216, 248, 330, 362 |
| FaqI | GGGAC | 1 cut(s) | 1064 |
| FatI | CATG | 5 cut(s) | 1032, 1180, 1326, 1570, 1868 |
| FauI | CCCGC | 1 cut(s) | 457 |
| FbaI | TGATCA | 2 cut(s) | 1087, 1567 |
| Fnu4HI | GCNGC | 2 cut(s) | 1461, 1720 |
| FriOI | GRGCYC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| Fsp4HI | GCNGC | 2 cut(s) | 1461, 1720 |
| FspBI | CTAG | 8 cut(s) | 167, 281, 395, 488, 509, 1539, 1560, 1733 |
| GlaI | GCGC | 1 cut(s) | 216 |
| GluI | GCNGC | 2 cut(s) | 1461, 1720 |
| HaeIII | GGCC | 1 cut(s) | 1575 |
| HapII | CCGG | 1 cut(s) | 1619 |
| HgaI | GACGC | 3 cut(s) | 514, 1332, 1602 |
| HhaI | GCGC | 1 cut(s) | 217 |
| Hin1II | CATG | 5 cut(s) | 1036, 1184, 1330, 1574, 1872 |
| Hin6I | GCGC | 1 cut(s) | 215 |
| HinP1I | GCGC | 1 cut(s) | 215 |
| HindIII | AAGCTT | 4 cut(s) | 53, 743, 1082, 1806 |
| HpaII | CCGG | 1 cut(s) | 1619 |
| HphI | GGTGA | 6 cut(s) | 251, 365, 479, 593, 1048, 1803 |
| Hpy166II | GTNNAC | 1 cut(s) | 1798 |
| Hpy188I | TCNGA | 7 cut(s) | 34, 739, 1069, 1158, 1405, 1783, 1838 |
| Hpy8I | GTNNAC | 1 cut(s) | 1798 |
| Hpy99I | CGWCG | 1 cut(s) | 508 |
| HpyAV | CCTTC | 7 cut(s) | 230, 373, 473, 578, 1113, 1291, 1428 |
| HpyCH4III | ACNGT | 6 cut(s) | 835, 859, 919, 943, 1015, 1681 |
| HpyCH4IV | ACGT | 1 cut(s) | 1454 |
| HpyCH4V | TGCA | 5 cut(s) | 578, 1010, 1259, 1460, 1881 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 717, 1217, 1485, 1878 |
| HpyF3I | CTNAG | 5 cut(s) | 738, 1319, 1577, 1641, 1780 |
| HpySE526I | ACGT | 1 cut(s) | 1454 |
| Hsp92II | CATG | 5 cut(s) | 1036, 1184, 1330, 1574, 1872 |
| HspAI | GCGC | 1 cut(s) | 215 |
| Ksp22I | TGATCA | 2 cut(s) | 1087, 1567 |
| LmnI | GCTCC | 1 cut(s) | 1561 |
| Lsp1109I | GCAGC | 2 cut(s) | 1472, 1731 |
| LweI | GCATC | 2 cut(s) | 1539, 1674 |
| MaeI | CTAG | 8 cut(s) | 167, 281, 395, 488, 509, 1539, 1560, 1733 |
| MaeII | ACGT | 1 cut(s) | 1454 |
| MaeIII | GTNAC | 1 cut(s) | 1192 |
| MflI | RGATCY | 2 cut(s) | 106, 484 |
| MhlI | GDGCHC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| MluCI | AATT | 9 cut(s) | 781, 845, 850, 929, 934, 1056, 1101, 1518, 1894 |
| MlyI | GAGTC | 8 cut(s) | 188, 317, 416, 530, 1052, 1259, 1324, 1709 |
| MmeI | TCCRAC | 1 cut(s) | 1251 |
| MnlI | CCTC | 8 cut(s) | 84, 343, 1063, 1109, 1399, 1624, 1645, 1709 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1059, 1128 |
| MseI | TTAA | 2 cut(s) | 57, 389 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1889 |
| MspI | CCGG | 1 cut(s) | 1619 |
| MspR9I | CCNGG | 1 cut(s) | 442 |
| MvaI | CCWGG | 1 cut(s) | 442 |
| MvnI | CGCG | 2 cut(s) | 215, 1596 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 717, 1217, 1485, 1878 |
| NlaIII | CATG | 5 cut(s) | 1036, 1184, 1330, 1574, 1872 |
| NspI | RCATGY | 2 cut(s) | 1330, 1872 |
| NspV | TTCGAA | 1 cut(s) | 687 |
| PagI | TCATGA | 1 cut(s) | 1180 |
| PaqCI | CACCTGC | 1 cut(s) | 569 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1330 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1059, 1128 |
| PfeI | GAWTC | 7 cut(s) | 992, 1153, 1159, 1379, 1581, 1601, 1817 |
| PflFI | GACNNNGTC | 2 cut(s) | 859, 943 |
| PkrI | GCNGC | 2 cut(s) | 1462, 1721 |
| PleI | GAGTC | 8 cut(s) | 188, 316, 416, 530, 1051, 1258, 1323, 1708 |
| PpsI | GAGTC | 8 cut(s) | 188, 316, 416, 530, 1051, 1258, 1323, 1708 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1272 |
| PsiI | TTATAA | 1 cut(s) | 1287 |
| Psp124BI | GAGCTC | 4 cut(s) | 50, 161, 275, 503 |
| Psp6I | CCWGG | 1 cut(s) | 440 |
| PspGI | CCWGG | 1 cut(s) | 440 |
| PspPI | GGNCC | 1 cut(s) | 700 |
| PstI | CTGCAG | 1 cut(s) | 1462 |
| PstNI | CAGNNNCTG | 2 cut(s) | 863, 947 |
| PsuI | RGATCY | 2 cut(s) | 106, 484 |
| PsyI | GACNNNGTC | 2 cut(s) | 859, 943 |
| RsaI | GTAC | 1 cut(s) | 1623 |
| RsaNI | GTAC | 1 cut(s) | 1622 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1889 |
| SacI | GAGCTC | 4 cut(s) | 50, 161, 275, 503 |
| SaqAI | TTAA | 2 cut(s) | 57, 389 |
| SatI | GCNGC | 2 cut(s) | 1461, 1720 |
| Sau96I | GGNCC | 1 cut(s) | 700 |
| SchI | GAGTC | 8 cut(s) | 188, 317, 416, 530, 1052, 1259, 1324, 1709 |
| ScrFI | CCNGG | 1 cut(s) | 442 |
| SduI | GDGCHC | 5 cut(s) | 50, 161, 275, 503, 1781 |
| SfaNI | GCATC | 2 cut(s) | 1539, 1674 |
| SfcI | CTRYAG | 1 cut(s) | 1458 |
| SfuI | TTCGAA | 1 cut(s) | 687 |
| SinI | GGWCC | 1 cut(s) | 700 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1889 |
| SmlI | CTYRAG | 1 cut(s) | 347 |
| SmoI | CTYRAG | 1 cut(s) | 347 |
| Sse9I | AATT | 9 cut(s) | 781, 845, 850, 929, 934, 1056, 1101, 1518, 1894 |
| SsiI | CCGC | 3 cut(s) | 213, 464, 1887 |
| SspI | AATATT | 1 cut(s) | 429 |
| SspMI | CTAG | 8 cut(s) | 167, 281, 395, 488, 509, 1539, 1560, 1733 |
| SstI | GAGCTC | 4 cut(s) | 50, 161, 275, 503 |
| StyD4I | CCNGG | 1 cut(s) | 440 |
| StyI | CCWWGG | 1 cut(s) | 1773 |
| TaaI | ACNGT | 6 cut(s) | 835, 859, 919, 943, 1015, 1681 |
| TaiI | ACGT | 1 cut(s) | 1457 |
| TaqI | TCGA | 8 cut(s) | 503, 687, 854, 938, 1140, 1333, 1584, 1662 |
| TasI | AATT | 9 cut(s) | 781, 845, 850, 929, 934, 1056, 1101, 1518, 1894 |
| TfiI | GAWTC | 7 cut(s) | 992, 1153, 1159, 1379, 1581, 1601, 1817 |
| Tru1I | TTAA | 2 cut(s) | 57, 389 |
| Tru9I | TTAA | 2 cut(s) | 57, 389 |
| TscAI | CASTG | 4 cut(s) | 864, 948, 1276, 1356 |
| TseI | GCWGC | 2 cut(s) | 1460, 1719 |
| TspGWI | ACGGA | 4 cut(s) | 79, 519, 572, 1858 |
| TspRI | CASTG | 4 cut(s) | 864, 948, 1276, 1356 |
| Tth111I | GACNNNGTC | 2 cut(s) | 859, 943 |
| VpaK11BI | GGWCC | 1 cut(s) | 700 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1479 |
| XapI | RAATTY | 3 cut(s) | 781, 850, 934 |
| XbaI | TCTAGA | 1 cut(s) | 487 |
| XceI | RCATGY | 2 cut(s) | 1330, 1872 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 106 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1059, 1128 |
| XspI | CTAG | 8 cut(s) | 167, 281, 395, 488, 509, 1539, 1560, 1733 |