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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14650 |
| fragaria_vesca | FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 |
| malus_domestica | MD13G1201700.v1.1 MD16G1201900.v1.1 MD16G1202000.v1.1 |
| prunus_persica | Prupe.1G023500_v2.0.a1 Prupe.1G023500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0388601 |
| rosa_laevigata | RLG00000010035 |
| rosa_multiflora | Rmu_sc0004459.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00335060 |
| rosa_rugosa | Rorug03G0319200 Rorug03G0319200 |
| rosa_samantha | Rh4AG023600 Rh4BG016800 Rh4CG026300 Rh4DG017600 |
| rosa_wichuraiana | Rw0G009360 Rw4G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 635, 1531 |
| AccIII | TCCGGA | 1 cut(s) | 2278 |
| AclWI | GGATC | 7 cut(s) | 182, 350, 656, 669, 1154, 1260, 2270 |
| AcsI | RAATTY | 3 cut(s) | 1357, 2011, 2563 |
| AcuI | CTGAAG | 9 cut(s) | 156, 276, 324, 612, 732, 1241, 2091, 2311, 2379 |
| AfaI | GTAC | 2 cut(s) | 132, 1156 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 1192, 1708, 2483 |
| AgeI | ACCGGT | 1 cut(s) | 790 |
| AjnI | CCWGG | 2 cut(s) | 1045, 1731 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1063, 1095 |
| Alw21I | GWGCWC | 2 cut(s) | 246, 2267 |
| Alw26I | GTCTC | 5 cut(s) | 312, 1112, 1697, 1958, 2086 |
| AlwI | GGATC | 7 cut(s) | 182, 350, 656, 669, 1154, 1260, 2270 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1556, 2594 |
| Ama87I | CYCGRG | 1 cut(s) | 2320 |
| Aor13HI | TCCGGA | 1 cut(s) | 2278 |
| AoxI | GGCC | 1 cut(s) | 1203 |
| ApeKI | GCWGC | 5 cut(s) | 2156, 2159, 2162, 2165, 2603 |
| ApoI | RAATTY | 3 cut(s) | 1357, 2011, 2563 |
| AsiGI | ACCGGT | 1 cut(s) | 790 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1392, 1777 |
| AspLEI | GCGC | 1 cut(s) | 2637 |
| AspS9I | GGNCC | 3 cut(s) | 1067, 1720, 2250 |
| AsuC2I | CCSGG | 2 cut(s) | 360, 2645 |
| AsuHPI | GGTGA | 9 cut(s) | 197, 284, 740, 1112, 1270, 1366, 1773, 2030, 2438 |
| AvaI | CYCGRG | 1 cut(s) | 2320 |
| AvaII | GGWCC | 3 cut(s) | 1067, 1720, 2250 |
| AxyI | CCTNAGG | 1 cut(s) | 1431 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 699, 732 |
| BamHI | GGATCC | 1 cut(s) | 661 |
| BbsI | GAAGAC | 1 cut(s) | 780 |
| Bbv12I | GWGCWC | 2 cut(s) | 246, 2267 |
| BbvI | GCAGC | 5 cut(s) | 2168, 2171, 2174, 2177, 2590 |
| BccI | CCATC | 7 cut(s) | 7, 461, 888, 917, 1170, 1537, 2363 |
| BciT130I | CCWGG | 2 cut(s) | 1047, 1733 |
| BclI | TGATCA | 3 cut(s) | 643, 1638, 2685 |
| BcnI | CCSGG | 2 cut(s) | 360, 2645 |
| BcoDI | GTCTC | 5 cut(s) | 312, 1112, 1697, 1958, 2086 |
| BfmI | CTRYAG | 4 cut(s) | 57, 957, 1020, 1532 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 176 |
| BisI | GCNGC | 5 cut(s) | 2157, 2160, 2163, 2166, 2604 |
| BlpI | GCTNAGC | 1 cut(s) | 2413 |
| BlsI | GCNGC | 5 cut(s) | 2158, 2161, 2164, 2167, 2605 |
| Bme1390I | CCNGG | 4 cut(s) | 360, 1047, 1733, 2645 |
| Bme18I | GGWCC | 3 cut(s) | 1067, 1720, 2250 |
| BmeT110I | CYCGRG | 1 cut(s) | 2320 |
| BmgT120I | GGNCC | 3 cut(s) | 1067, 1720, 2250 |
| BmiI | GGNNCC | 3 cut(s) | 663, 825, 1869 |
| BmrFI | CCNGG | 4 cut(s) | 360, 1047, 1733, 2645 |
| BmsI | GCATC | 4 cut(s) | 947, 1171, 1307, 1986 |
| BpiI | GAAGAC | 1 cut(s) | 780 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1393, 1425, 2534, 2566 |
| BpmI | CTGGAG | 2 cut(s) | 1214, 1920 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2413 |
| BpuEI | CTTGAG | 3 cut(s) | 449, 537, 1772 |
| BpuMI | CCSGG | 2 cut(s) | 360, 2645 |
| BsaJI | CCNNGG | 1 cut(s) | 1046 |
| BsaWI | WCCGGW | 2 cut(s) | 790, 2278 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 579, 609 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 365, 366, 1192, 1708, 2483 |
| Bse118I | RCCGGY | 1 cut(s) | 790 |
| Bse1I | ACTGG | 6 cut(s) | 191, 1156, 1197, 1723, 1881, 2599 |
| Bse21I | CCTNAGG | 1 cut(s) | 1431 |
| Bse3DI | GCAATG | 1 cut(s) | 676 |
| BseAI | TCCGGA | 1 cut(s) | 2278 |
| BseBI | CCWGG | 2 cut(s) | 1047, 1733 |
| BseDI | CCNNGG | 1 cut(s) | 1046 |
| BseGI | GGATG | 7 cut(s) | 262, 463, 718, 919, 1186, 1548, 1675 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 1192, 1708, 2483 |
| BseMI | GCAATG | 1 cut(s) | 676 |
| BseMII | CTCAG | 7 cut(s) | 1107, 1242, 1341, 1707, 2094, 2427, 2601 |
| BseNI | ACTGG | 6 cut(s) | 191, 1156, 1197, 1723, 1881, 2599 |
| BseRI | GAGGAG | 2 cut(s) | 836, 2477 |
| BseXI | GCAGC | 5 cut(s) | 2168, 2171, 2174, 2177, 2590 |
| BshFI | GGCC | 1 cut(s) | 1205 |
| BshTI | ACCGGT | 1 cut(s) | 790 |
| BsiHKAI | GWGCWC | 2 cut(s) | 246, 2267 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2320 |
| BsiSI | CCGG | 4 cut(s) | 360, 791, 2279, 2644 |
| BslFI | GGGAC | 1 cut(s) | 484 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 1192, 1708, 2483 |
| BsmAI | GTCTC | 5 cut(s) | 312, 1112, 1697, 1958, 2086 |
| BsmBI | CGTCTC | 2 cut(s) | 1112, 1697 |
| BsmFI | GGGAC | 1 cut(s) | 484 |
| BsnI | GGCC | 1 cut(s) | 1205 |
| BsoBI | CYCGRG | 1 cut(s) | 2320 |
| Bsp1286I | GDGCHC | 2 cut(s) | 246, 2267 |
| Bsp13I | TCCGGA | 1 cut(s) | 2278 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2413 |
| BspANI | GGCC | 1 cut(s) | 1205 |
| BspCNI | CTCAG | 7 cut(s) | 1108, 1241, 1342, 1708, 2095, 2426, 2600 |
| BspEI | TCCGGA | 1 cut(s) | 2278 |
| BspHI | TCATGA | 2 cut(s) | 157, 613 |
| BspLI | GGNNCC | 3 cut(s) | 663, 825, 1869 |
| BspPI | GGATC | 7 cut(s) | 182, 350, 656, 669, 1154, 1260, 2270 |
| BspQI | GCTCTTC | 2 cut(s) | 234, 1227 |
| BsrDI | GCAATG | 1 cut(s) | 676 |
| BsrFI | RCCGGY | 1 cut(s) | 790 |
| BsrI | ACTGG | 6 cut(s) | 191, 1156, 1197, 1723, 1881, 2599 |
| BssAI | RCCGGY | 1 cut(s) | 790 |
| BssECI | CCNNGG | 1 cut(s) | 1046 |
| Bst2UI | CCWGG | 2 cut(s) | 1047, 1733 |
| Bst6I | CTCTTC | 7 cut(s) | 42, 234, 1227, 1613, 1812, 1829, 2493 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 944 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 526 |
| BstF5I | GGATG | 7 cut(s) | 262, 463, 718, 919, 1186, 1548, 1675 |
| BstHHI | GCGC | 1 cut(s) | 2637 |
| BstMAI | GTCTC | 5 cut(s) | 312, 1112, 1697, 1958, 2086 |
| BstNI | CCWGG | 2 cut(s) | 1047, 1733 |
| BstNSI | RCATGY | 1 cut(s) | 947 |
| BstSCI | CCNGG | 4 cut(s) | 358, 1045, 1731, 2643 |
| BstSFI | CTRYAG | 4 cut(s) | 57, 957, 1020, 1532 |
| BstV1I | GCAGC | 5 cut(s) | 2168, 2171, 2174, 2177, 2590 |
| BstV2I | GAAGAC | 1 cut(s) | 780 |
| BstX2I | RGATCY | 2 cut(s) | 661, 1252 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1888 |
| BstYI | RGATCY | 2 cut(s) | 661, 1252 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1431 |
| BsuRI | GGCC | 1 cut(s) | 1205 |
| BtsCI | GGATG | 7 cut(s) | 262, 463, 718, 919, 1186, 1548, 1675 |
| BtsIMutI | CAGTG | 8 cut(s) | 198, 344, 1113, 1190, 1730, 1888, 2265, 2265 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 526 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1556, 2594 |
| CciI | TCATGA | 2 cut(s) | 157, 613 |
| CfoI | GCGC | 1 cut(s) | 2637 |
| Cfr10I | RCCGGY | 1 cut(s) | 790 |
| Cfr13I | GGNCC | 3 cut(s) | 1067, 1720, 2250 |
| CseI | GACGC | 2 cut(s) | 202, 1679 |
| Csp6I | GTAC | 2 cut(s) | 131, 1155 |
| CspAI | ACCGGT | 1 cut(s) | 790 |
| CviQI | GTAC | 2 cut(s) | 131, 1155 |
| Eam1104I | CTCTTC | 7 cut(s) | 42, 234, 1227, 1613, 1812, 1829, 2493 |
| EarI | CTCTTC | 7 cut(s) | 42, 234, 1227, 1613, 1812, 1829, 2493 |
| Eco147I | AGGCCT | 1 cut(s) | 1205 |
| Eco47I | GGWCC | 3 cut(s) | 1067, 1720, 2250 |
| Eco57I | CTGAAG | 9 cut(s) | 156, 276, 324, 612, 732, 1241, 2091, 2311, 2379 |
| Eco81I | CCTNAGG | 1 cut(s) | 1431 |
| Eco88I | CYCGRG | 1 cut(s) | 2320 |
| EcoRI | GAATTC | 2 cut(s) | 2011, 2563 |
| EcoRII | CCWGG | 2 cut(s) | 1045, 1731 |
| EcoT22I | ATGCAT | 1 cut(s) | 1445 |
| Esp3I | CGTCTC | 2 cut(s) | 1112, 1697 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1063, 1095 |
| FaqI | GGGAC | 1 cut(s) | 484 |
| FauNDI | CATATG | 1 cut(s) | 1303 |
| FbaI | TGATCA | 3 cut(s) | 643, 1638, 2685 |
| FblI | GTMKAC | 2 cut(s) | 635, 1531 |
| Fnu4HI | GCNGC | 5 cut(s) | 2157, 2160, 2163, 2166, 2604 |
| FokI | GGATG | 7 cut(s) | 249, 470, 705, 926, 1193, 1555, 1682 |
| Fsp4HI | GCNGC | 5 cut(s) | 2157, 2160, 2163, 2166, 2604 |
| GlaI | GCGC | 1 cut(s) | 2636 |
| GluI | GCNGC | 5 cut(s) | 2157, 2160, 2163, 2166, 2604 |
| GsuI | CTGGAG | 2 cut(s) | 1214, 1920 |
| HaeIII | GGCC | 1 cut(s) | 1205 |
| HapII | CCGG | 4 cut(s) | 360, 791, 2279, 2644 |
| HgaI | GACGC | 2 cut(s) | 202, 1679 |
| HhaI | GCGC | 1 cut(s) | 2637 |
| Hin6I | GCGC | 1 cut(s) | 2635 |
| HinP1I | GCGC | 1 cut(s) | 2635 |
| HincII | GTYRAC | 1 cut(s) | 1791 |
| HindII | GTYRAC | 1 cut(s) | 1791 |
| HindIII | AAGCTT | 2 cut(s) | 66, 522 |
| HpaI | GTTAAC | 1 cut(s) | 1791 |
| HpaII | CCGG | 4 cut(s) | 360, 791, 2279, 2644 |
| HphI | GGTGA | 9 cut(s) | 197, 284, 740, 1112, 1270, 1366, 1773, 2030, 2438 |
| Hpy166II | GTNNAC | 4 cut(s) | 636, 731, 1532, 1791 |
| Hpy8I | GTNNAC | 4 cut(s) | 636, 731, 1532, 1791 |
| HpyAV | CCTTC | 6 cut(s) | 137, 142, 838, 2241, 2488, 2565 |
| HpyCH4IV | ACGT | 1 cut(s) | 1121 |
| HpySE526I | ACGT | 1 cut(s) | 1121 |
| HspAI | GCGC | 1 cut(s) | 2635 |
| Kpn2I | TCCGGA | 1 cut(s) | 2278 |
| Ksp22I | TGATCA | 3 cut(s) | 643, 1638, 2685 |
| KspAI | GTTAAC | 1 cut(s) | 1791 |
| LguI | GCTCTTC | 2 cut(s) | 234, 1227 |
| LmnI | GCTCC | 5 cut(s) | 587, 823, 1195, 1339, 2611 |
| Lsp1109I | GCAGC | 5 cut(s) | 2168, 2171, 2174, 2177, 2590 |
| LweI | GCATC | 4 cut(s) | 947, 1171, 1307, 1986 |
| MaeII | ACGT | 1 cut(s) | 1121 |
| MfeI | CAATTG | 1 cut(s) | 2689 |
| MflI | RGATCY | 2 cut(s) | 661, 1252 |
| MhlI | GDGCHC | 2 cut(s) | 246, 2267 |
| MlyI | GAGTC | 5 cut(s) | 986, 1979, 2465, 2474, 2579 |
| MmeI | TCCRAC | 7 cut(s) | 1009, 1370, 1464, 1546, 2066, 2633, 2685 |
| Mph1103I | ATGCAT | 1 cut(s) | 1445 |
| MroI | TCCGGA | 1 cut(s) | 2278 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1392, 1777 |
| MseI | TTAA | 4 cut(s) | 1361, 1452, 1649, 1790 |
| MslI | CAYNNNNRTG | 1 cut(s) | 102 |
| MspI | CCGG | 4 cut(s) | 360, 791, 2279, 2644 |
| MspR9I | CCNGG | 4 cut(s) | 360, 1047, 1733, 2645 |
| MunI | CAATTG | 1 cut(s) | 2689 |
| MvaI | CCWGG | 2 cut(s) | 1047, 1733 |
| NciI | CCSGG | 2 cut(s) | 360, 2645 |
| NdeI | CATATG | 1 cut(s) | 1303 |
| NlaIV | GGNNCC | 3 cut(s) | 663, 825, 1869 |
| NmuCI | GTSAC | 3 cut(s) | 1188, 1562, 2582 |
| NsiI | ATGCAT | 1 cut(s) | 1445 |
| NspI | RCATGY | 1 cut(s) | 947 |
| PagI | TCATGA | 2 cut(s) | 157, 613 |
| PceI | AGGCCT | 1 cut(s) | 1205 |
| PciSI | GCTCTTC | 2 cut(s) | 234, 1227 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1392, 1777 |
| PfoI | TCCNGGA | 1 cut(s) | 358 |
| PinAI | ACCGGT | 1 cut(s) | 790 |
| PkrI | GCNGC | 5 cut(s) | 2158, 2161, 2164, 2167, 2605 |
| PleI | GAGTC | 5 cut(s) | 985, 1979, 2464, 2473, 2579 |
| PpsI | GAGTC | 5 cut(s) | 985, 1979, 2464, 2473, 2579 |
| Psp6I | CCWGG | 2 cut(s) | 1045, 1731 |
| PspGI | CCWGG | 2 cut(s) | 1045, 1731 |
| PspN4I | GGNNCC | 3 cut(s) | 663, 825, 1869 |
| PspPI | GGNCC | 3 cut(s) | 1067, 1720, 2250 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1556, 2594 |
| PsuI | RGATCY | 2 cut(s) | 661, 1252 |
| RsaI | GTAC | 2 cut(s) | 132, 1156 |
| RsaNI | GTAC | 2 cut(s) | 131, 1155 |
| RseI | CAYNNNNRTG | 1 cut(s) | 102 |
| SapI | GCTCTTC | 2 cut(s) | 234, 1227 |
| SaqAI | TTAA | 4 cut(s) | 1361, 1452, 1649, 1790 |
| SatI | GCNGC | 5 cut(s) | 2157, 2160, 2163, 2166, 2604 |
| Sau96I | GGNCC | 3 cut(s) | 1067, 1720, 2250 |
| SchI | GAGTC | 5 cut(s) | 986, 1979, 2465, 2474, 2579 |
| ScrFI | CCNGG | 4 cut(s) | 360, 1047, 1733, 2645 |
| SduI | GDGCHC | 2 cut(s) | 246, 2267 |
| SfaNI | GCATC | 4 cut(s) | 947, 1171, 1307, 1986 |
| SfcI | CTRYAG | 4 cut(s) | 57, 957, 1020, 1532 |
| SinI | GGWCC | 3 cut(s) | 1067, 1720, 2250 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 102 |
| SmlI | CTYRAG | 3 cut(s) | 428, 552, 1751 |
| SmoI | CTYRAG | 3 cut(s) | 428, 552, 1751 |
| SseBI | AGGCCT | 1 cut(s) | 1205 |
| SspI | AATATT | 1 cut(s) | 2293 |
| StuI | AGGCCT | 1 cut(s) | 1205 |
| StyD4I | CCNGG | 4 cut(s) | 358, 1045, 1731, 2643 |
| TaiI | ACGT | 1 cut(s) | 1124 |
| TaqI | TCGA | 2 cut(s) | 755, 803 |
| Tru1I | TTAA | 4 cut(s) | 1361, 1452, 1649, 1790 |
| Tru9I | TTAA | 4 cut(s) | 1361, 1452, 1649, 1790 |
| TscAI | CASTG | 8 cut(s) | 198, 351, 1120, 1197, 1730, 1888, 2265, 2272 |
| TseFI | GTSAC | 3 cut(s) | 1188, 1562, 2582 |
| TseI | GCWGC | 5 cut(s) | 2156, 2159, 2162, 2165, 2603 |
| Tsp45I | GTSAC | 3 cut(s) | 1188, 1562, 2582 |
| TspRI | CASTG | 8 cut(s) | 198, 351, 1120, 1197, 1730, 1888, 2265, 2272 |
| VpaK11BI | GGWCC | 3 cut(s) | 1067, 1720, 2250 |
| XapI | RAATTY | 3 cut(s) | 1357, 2011, 2563 |
| XbaI | TCTAGA | 3 cut(s) | 493, 949, 1255 |
| XceI | RCATGY | 1 cut(s) | 947 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2092 |
| XmiI | GTMKAC | 2 cut(s) | 635, 1531 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1392, 1777 |
| Zsp2I | ATGCAT | 1 cut(s) | 1445 |