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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14650 |
| fragaria_vesca | FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 |
| malus_domestica | MD13G1201700.v1.1 MD16G1201900.v1.1 MD16G1202000.v1.1 |
| prunus_persica | Prupe.1G023500_v2.0.a1 Prupe.1G023500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0388601 |
| rosa_laevigata | RLG00000010035 |
| rosa_multiflora | Rmu_sc0004459.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00335060 |
| rosa_rugosa | Rorug03G0319200 Rorug03G0319200 |
| rosa_samantha | Rh4AG023600 Rh4BG016800 Rh4CG026300 Rh4DG017600 |
| rosa_wichuraiana | Rw0G009360 Rw4G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 10 |
| AccI | GTMKAC | 1 cut(s) | 1651 |
| AccII | CGCG | 1 cut(s) | 106 |
| AccIII | TCCGGA | 1 cut(s) | 2422 |
| AciI | CCGC | 4 cut(s) | 5, 10, 104, 106 |
| AcsI | RAATTY | 4 cut(s) | 1477, 1703, 2146, 2707 |
| AfaI | GTAC | 3 cut(s) | 255, 1279, 2277 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 110, 488, 1852, 2627 |
| AgeI | ACCGGT | 1 cut(s) | 913 |
| AjnI | CCWGG | 2 cut(s) | 481, 1168 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1186, 1218 |
| Alw21I | GWGCWC | 2 cut(s) | 369, 2411 |
| Alw26I | GTCTC | 5 cut(s) | 72, 435, 1235, 2093, 2221 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1676, 2738 |
| Ama87I | CYCGRG | 2 cut(s) | 675, 2464 |
| Aor13HI | TCCGGA | 1 cut(s) | 2422 |
| AoxI | GGCC | 4 cut(s) | 101, 1190, 1323, 2790 |
| ApeKI | GCWGC | 5 cut(s) | 1315, 2303, 2306, 2309, 2747 |
| ApoI | RAATTY | 4 cut(s) | 1477, 1703, 2146, 2707 |
| AsiGI | ACCGGT | 1 cut(s) | 913 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1921 |
| AspLEI | GCGC | 1 cut(s) | 2781 |
| AspS9I | GGNCC | 3 cut(s) | 1864, 2394, 2790 |
| AsuC2I | CCSGG | 1 cut(s) | 2789 |
| AsuHPI | GGTGA | 9 cut(s) | 320, 407, 863, 1235, 1390, 1486, 1917, 2165, 2582 |
| AvaI | CYCGRG | 2 cut(s) | 675, 2464 |
| AvaII | GGWCC | 2 cut(s) | 1864, 2394 |
| AxyI | CCTNAGG | 1 cut(s) | 1551 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 822, 855 |
| BamHI | GGATCC | 1 cut(s) | 784 |
| BauI | CACGAG | 1 cut(s) | 1829 |
| BbsI | GAAGAC | 1 cut(s) | 903 |
| Bbv12I | GWGCWC | 2 cut(s) | 369, 2411 |
| BbvI | GCAGC | 5 cut(s) | 1327, 2315, 2318, 2321, 2734 |
| BccI | CCATC | 5 cut(s) | 38, 130, 584, 1040, 1657 |
| BceAI | ACGGC | 1 cut(s) | 916 |
| BciT130I | CCWGG | 2 cut(s) | 483, 1170 |
| BclI | TGATCA | 3 cut(s) | 766, 1758, 2829 |
| BcnI | CCSGG | 1 cut(s) | 2789 |
| BcoDI | GTCTC | 5 cut(s) | 72, 435, 1235, 2093, 2221 |
| BfaI | CTAG | 8 cut(s) | 24, 617, 1073, 1517, 1647, 1823, 2378, 2627 |
| BfmI | CTRYAG | 3 cut(s) | 1080, 1143, 1652 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 299 |
| BisI | GCNGC | 6 cut(s) | 104, 1316, 2304, 2307, 2310, 2748 |
| BlpI | GCTNAGC | 1 cut(s) | 2557 |
| BlsI | GCNGC | 6 cut(s) | 105, 1317, 2305, 2308, 2311, 2749 |
| Bme1390I | CCNGG | 3 cut(s) | 483, 1170, 2789 |
| Bme18I | GGWCC | 2 cut(s) | 1864, 2394 |
| BmeT110I | CYCGRG | 2 cut(s) | 675, 2464 |
| BmgT120I | GGNCC | 3 cut(s) | 1864, 2394, 2790 |
| BmiI | GGNNCC | 2 cut(s) | 786, 948 |
| BmrFI | CCNGG | 3 cut(s) | 483, 1170, 2789 |
| BmsI | GCATC | 6 cut(s) | 1294, 1427, 1843, 2121, 2232, 2306 |
| BpiI | GAAGAC | 1 cut(s) | 903 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1513, 1545, 2678, 2710 |
| BpmI | CTGGAG | 1 cut(s) | 2468 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2557 |
| BpuEI | CTTGAG | 2 cut(s) | 572, 1916 |
| BpuMI | CCSGG | 1 cut(s) | 2789 |
| BsaJI | CCNNGG | 4 cut(s) | 104, 1169, 1187, 1791 |
| BsaWI | WCCGGW | 3 cut(s) | 913, 2363, 2422 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 702, 732 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 110, 488, 1852, 2627 |
| Bse118I | RCCGGY | 1 cut(s) | 913 |
| Bse1I | ACTGG | 3 cut(s) | 1867, 2025, 2743 |
| Bse21I | CCTNAGG | 1 cut(s) | 1551 |
| Bse3DI | GCAATG | 2 cut(s) | 799, 1459 |
| BseAI | TCCGGA | 1 cut(s) | 2422 |
| BseBI | CCWGG | 2 cut(s) | 483, 1170 |
| BseDI | CCNNGG | 4 cut(s) | 104, 1169, 1187, 1791 |
| BseGI | GGATG | 7 cut(s) | 385, 586, 841, 1042, 1309, 1668, 1819 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 110, 488, 1852, 2627 |
| BseMI | GCAATG | 2 cut(s) | 799, 1459 |
| BseMII | CTCAG | 7 cut(s) | 1230, 1362, 1461, 1851, 2229, 2571, 2745 |
| BseNI | ACTGG | 3 cut(s) | 1867, 2025, 2743 |
| BseRI | GAGGAG | 3 cut(s) | 959, 1808, 2621 |
| BseXI | GCAGC | 5 cut(s) | 1327, 2315, 2318, 2321, 2734 |
| Bsh1236I | CGCG | 1 cut(s) | 106 |
| BshFI | GGCC | 4 cut(s) | 103, 1192, 1325, 2792 |
| BshTI | ACCGGT | 1 cut(s) | 913 |
| BsiHKAI | GWGCWC | 2 cut(s) | 369, 2411 |
| BsiHKCI | CYCGRG | 2 cut(s) | 675, 2464 |
| BsiSI | CCGG | 4 cut(s) | 914, 2364, 2423, 2788 |
| BslFI | GGGAC | 1 cut(s) | 607 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 110, 488, 1852, 2627 |
| BsmAI | GTCTC | 5 cut(s) | 72, 435, 1235, 2093, 2221 |
| BsmBI | CGTCTC | 1 cut(s) | 1235 |
| BsmFI | GGGAC | 1 cut(s) | 607 |
| BsnI | GGCC | 4 cut(s) | 103, 1192, 1325, 2792 |
| BsoBI | CYCGRG | 2 cut(s) | 675, 2464 |
| Bsp1286I | GDGCHC | 2 cut(s) | 369, 2411 |
| Bsp13I | TCCGGA | 1 cut(s) | 2422 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2557 |
| BspACI | CCGC | 4 cut(s) | 5, 10, 104, 106 |
| BspANI | GGCC | 4 cut(s) | 103, 1192, 1325, 2792 |
| BspCNI | CTCAG | 7 cut(s) | 1231, 1361, 1462, 1852, 2230, 2570, 2744 |
| BspEI | TCCGGA | 1 cut(s) | 2422 |
| BspFNI | CGCG | 1 cut(s) | 106 |
| BspHI | TCATGA | 2 cut(s) | 280, 736 |
| BspLI | GGNNCC | 2 cut(s) | 786, 948 |
| BspQI | GCTCTTC | 2 cut(s) | 357, 1347 |
| BsrBI | CCGCTC | 1 cut(s) | 10 |
| BsrDI | GCAATG | 2 cut(s) | 799, 1459 |
| BsrFI | RCCGGY | 1 cut(s) | 913 |
| BsrI | ACTGG | 3 cut(s) | 1867, 2025, 2743 |
| BssAI | RCCGGY | 1 cut(s) | 913 |
| BssECI | CCNNGG | 4 cut(s) | 104, 1169, 1187, 1791 |
| BssSI | CACGAG | 1 cut(s) | 1829 |
| BssT1I | CCWWGG | 1 cut(s) | 1187 |
| Bst2BI | CACGAG | 1 cut(s) | 1829 |
| Bst2UI | CCWGG | 2 cut(s) | 483, 1170 |
| Bst6I | CTCTTC | 8 cut(s) | 80, 165, 357, 1347, 1733, 1956, 1973, 2637 |
| BstC8I | GCNNGC | 2 cut(s) | 193, 649 |
| BstDSI | CCRYGG | 1 cut(s) | 104 |
| BstF5I | GGATG | 7 cut(s) | 385, 586, 841, 1042, 1309, 1668, 1819 |
| BstFNI | CGCG | 1 cut(s) | 106 |
| BstHHI | GCGC | 1 cut(s) | 2781 |
| BstMAI | GTCTC | 5 cut(s) | 72, 435, 1235, 2093, 2221 |
| BstNI | CCWGG | 2 cut(s) | 483, 1170 |
| BstNSI | RCATGY | 2 cut(s) | 1070, 2196 |
| BstSCI | CCNGG | 3 cut(s) | 481, 1168, 2787 |
| BstSFI | CTRYAG | 3 cut(s) | 1080, 1143, 1652 |
| BstUI | CGCG | 1 cut(s) | 106 |
| BstV1I | GCAGC | 5 cut(s) | 1327, 2315, 2318, 2321, 2734 |
| BstV2I | GAAGAC | 1 cut(s) | 903 |
| BstX2I | RGATCY | 2 cut(s) | 613, 784 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2032 |
| BstYI | RGATCY | 2 cut(s) | 613, 784 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1551 |
| BsuRI | GGCC | 4 cut(s) | 103, 1192, 1325, 2792 |
| BtgI | CCRYGG | 1 cut(s) | 104 |
| BtsCI | GGATG | 7 cut(s) | 385, 586, 841, 1042, 1309, 1668, 1819 |
| BtsIMutI | CAGTG | 6 cut(s) | 467, 1236, 1874, 2032, 2409, 2409 |
| Cac8I | GCNNGC | 2 cut(s) | 193, 649 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1676, 2738 |
| CciI | TCATGA | 2 cut(s) | 280, 736 |
| CfoI | GCGC | 1 cut(s) | 2781 |
| Cfr10I | RCCGGY | 1 cut(s) | 913 |
| Cfr13I | GGNCC | 3 cut(s) | 1864, 2394, 2790 |
| Cfr42I | CCGCGG | 1 cut(s) | 107 |
| CseI | GACGC | 1 cut(s) | 325 |
| Csp6I | GTAC | 3 cut(s) | 254, 1278, 2276 |
| CspAI | ACCGGT | 1 cut(s) | 913 |
| CviQI | GTAC | 3 cut(s) | 254, 1278, 2276 |
| Eam1104I | CTCTTC | 8 cut(s) | 80, 165, 357, 1347, 1733, 1956, 1973, 2637 |
| EarI | CTCTTC | 8 cut(s) | 80, 165, 357, 1347, 1733, 1956, 1973, 2637 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 1187 |
| Eco147I | AGGCCT | 1 cut(s) | 1325 |
| Eco47I | GGWCC | 2 cut(s) | 1864, 2394 |
| Eco81I | CCTNAGG | 1 cut(s) | 1551 |
| Eco88I | CYCGRG | 2 cut(s) | 675, 2464 |
| EcoRI | GAATTC | 1 cut(s) | 2707 |
| EcoRII | CCWGG | 2 cut(s) | 481, 1168 |
| EcoT14I | CCWWGG | 1 cut(s) | 1187 |
| EcoT22I | ATGCAT | 1 cut(s) | 1565 |
| ErhI | CCWWGG | 1 cut(s) | 1187 |
| Esp3I | CGTCTC | 1 cut(s) | 1235 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1186, 1218 |
| FaqI | GGGAC | 1 cut(s) | 607 |
| FauNDI | CATATG | 1 cut(s) | 1423 |
| FbaI | TGATCA | 3 cut(s) | 766, 1758, 2829 |
| FblI | GTMKAC | 1 cut(s) | 1651 |
| Fnu4HI | GCNGC | 6 cut(s) | 104, 1316, 2304, 2307, 2310, 2748 |
| FokI | GGATG | 7 cut(s) | 372, 593, 828, 1049, 1316, 1675, 1826 |
| Fsp4HI | GCNGC | 6 cut(s) | 104, 1316, 2304, 2307, 2310, 2748 |
| FspBI | CTAG | 8 cut(s) | 24, 617, 1073, 1517, 1647, 1823, 2378, 2627 |
| GlaI | GCGC | 1 cut(s) | 2780 |
| GluI | GCNGC | 6 cut(s) | 104, 1316, 2304, 2307, 2310, 2748 |
| GsuI | CTGGAG | 1 cut(s) | 2468 |
| HaeIII | GGCC | 4 cut(s) | 103, 1192, 1325, 2792 |
| HapII | CCGG | 4 cut(s) | 914, 2364, 2423, 2788 |
| HgaI | GACGC | 1 cut(s) | 325 |
| HhaI | GCGC | 1 cut(s) | 2781 |
| Hin6I | GCGC | 1 cut(s) | 2779 |
| HinP1I | GCGC | 1 cut(s) | 2779 |
| HincII | GTYRAC | 1 cut(s) | 1935 |
| HindII | GTYRAC | 1 cut(s) | 1935 |
| HindIII | AAGCTT | 2 cut(s) | 189, 645 |
| HpaI | GTTAAC | 1 cut(s) | 1935 |
| HpaII | CCGG | 4 cut(s) | 914, 2364, 2423, 2788 |
| HphI | GGTGA | 9 cut(s) | 320, 407, 863, 1235, 1390, 1486, 1917, 2165, 2582 |
| Hpy166II | GTNNAC | 3 cut(s) | 854, 1652, 1935 |
| Hpy8I | GTNNAC | 3 cut(s) | 854, 1652, 1935 |
| Hpy99I | CGWCG | 1 cut(s) | 1315 |
| HpyAV | CCTTC | 7 cut(s) | 93, 260, 265, 961, 2385, 2632, 2709 |
| HpyCH4IV | ACGT | 1 cut(s) | 1244 |
| HpySE526I | ACGT | 1 cut(s) | 1244 |
| HspAI | GCGC | 1 cut(s) | 2779 |
| Kpn2I | TCCGGA | 1 cut(s) | 2422 |
| Ksp22I | TGATCA | 3 cut(s) | 766, 1758, 2829 |
| KspAI | GTTAAC | 1 cut(s) | 1935 |
| KspI | CCGCGG | 1 cut(s) | 107 |
| LguI | GCTCTTC | 2 cut(s) | 357, 1347 |
| LmnI | GCTCC | 6 cut(s) | 7, 710, 946, 1459, 1795, 2755 |
| Lsp1109I | GCAGC | 5 cut(s) | 1327, 2315, 2318, 2321, 2734 |
| LweI | GCATC | 6 cut(s) | 1294, 1427, 1843, 2121, 2232, 2306 |
| MaeI | CTAG | 8 cut(s) | 24, 617, 1073, 1517, 1647, 1823, 2378, 2627 |
| MaeII | ACGT | 1 cut(s) | 1244 |
| MaeIII | GTNAC | 9 cut(s) | 140, 634, 865, 916, 1523, 1682, 2257, 2726, 2734 |
| MbiI | CCGCTC | 1 cut(s) | 10 |
| MfeI | CAATTG | 2 cut(s) | 74, 2833 |
| MflI | RGATCY | 2 cut(s) | 613, 784 |
| MhlI | GDGCHC | 2 cut(s) | 369, 2411 |
| MlyI | GAGTC | 5 cut(s) | 1109, 2114, 2609, 2618, 2723 |
| MmeI | TCCRAC | 7 cut(s) | 1132, 1490, 1584, 1666, 2201, 2777, 2829 |
| Mph1103I | ATGCAT | 1 cut(s) | 1565 |
| MroI | TCCGGA | 1 cut(s) | 2422 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1921 |
| MseI | TTAA | 4 cut(s) | 1481, 1572, 1769, 1934 |
| MslI | CAYNNNNRTG | 2 cut(s) | 42, 225 |
| MspA1I | CMGCKG | 1 cut(s) | 106 |
| MspI | CCGG | 4 cut(s) | 914, 2364, 2423, 2788 |
| MspR9I | CCNGG | 3 cut(s) | 483, 1170, 2789 |
| MunI | CAATTG | 2 cut(s) | 74, 2833 |
| MvaI | CCWGG | 2 cut(s) | 483, 1170 |
| MvnI | CGCG | 1 cut(s) | 106 |
| NciI | CCSGG | 1 cut(s) | 2789 |
| NdeI | CATATG | 1 cut(s) | 1423 |
| NlaIV | GGNNCC | 2 cut(s) | 786, 948 |
| NmeAIII | GCCGAG | 1 cut(s) | 1816 |
| NmuCI | GTSAC | 2 cut(s) | 1682, 2726 |
| NsiI | ATGCAT | 1 cut(s) | 1565 |
| NspI | RCATGY | 2 cut(s) | 1070, 2196 |
| PagI | TCATGA | 2 cut(s) | 280, 736 |
| PceI | AGGCCT | 1 cut(s) | 1325 |
| PciSI | GCTCTTC | 2 cut(s) | 357, 1347 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1921 |
| PfoI | TCCNGGA | 1 cut(s) | 481 |
| PinAI | ACCGGT | 1 cut(s) | 913 |
| PkrI | GCNGC | 6 cut(s) | 105, 1317, 2305, 2308, 2311, 2749 |
| PleI | GAGTC | 5 cut(s) | 1108, 2114, 2608, 2617, 2723 |
| PpsI | GAGTC | 5 cut(s) | 1108, 2114, 2608, 2617, 2723 |
| Psp6I | CCWGG | 2 cut(s) | 481, 1168 |
| PspGI | CCWGG | 2 cut(s) | 481, 1168 |
| PspN4I | GGNNCC | 2 cut(s) | 786, 948 |
| PspPI | GGNCC | 3 cut(s) | 1864, 2394, 2790 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1676, 2738 |
| PsuI | RGATCY | 2 cut(s) | 613, 784 |
| RsaI | GTAC | 3 cut(s) | 255, 1279, 2277 |
| RsaNI | GTAC | 3 cut(s) | 254, 1278, 2276 |
| RseI | CAYNNNNRTG | 2 cut(s) | 42, 225 |
| SacII | CCGCGG | 1 cut(s) | 107 |
| SapI | GCTCTTC | 2 cut(s) | 357, 1347 |
| SaqAI | TTAA | 4 cut(s) | 1481, 1572, 1769, 1934 |
| SatI | GCNGC | 6 cut(s) | 104, 1316, 2304, 2307, 2310, 2748 |
| Sau96I | GGNCC | 3 cut(s) | 1864, 2394, 2790 |
| SchI | GAGTC | 5 cut(s) | 1109, 2114, 2609, 2618, 2723 |
| ScrFI | CCNGG | 3 cut(s) | 483, 1170, 2789 |
| SduI | GDGCHC | 2 cut(s) | 369, 2411 |
| SfaNI | GCATC | 6 cut(s) | 1294, 1427, 1843, 2121, 2232, 2306 |
| SfcI | CTRYAG | 3 cut(s) | 1080, 1143, 1652 |
| Sfr303I | CCGCGG | 1 cut(s) | 107 |
| SgrBI | CCGCGG | 1 cut(s) | 107 |
| SinI | GGWCC | 2 cut(s) | 1864, 2394 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 42, 225 |
| SmlI | CTYRAG | 2 cut(s) | 551, 1895 |
| SmoI | CTYRAG | 2 cut(s) | 551, 1895 |
| SseBI | AGGCCT | 1 cut(s) | 1325 |
| SsiI | CCGC | 4 cut(s) | 5, 10, 104, 106 |
| SspI | AATATT | 1 cut(s) | 2437 |
| SspMI | CTAG | 8 cut(s) | 24, 617, 1073, 1517, 1647, 1823, 2378, 2627 |
| StuI | AGGCCT | 1 cut(s) | 1325 |
| StyD4I | CCNGG | 3 cut(s) | 481, 1168, 2787 |
| StyI | CCWWGG | 1 cut(s) | 1187 |
| TaiI | ACGT | 1 cut(s) | 1247 |
| TaqI | TCGA | 5 cut(s) | 94, 878, 926, 1212, 1375 |
| TatI | WGTACW | 1 cut(s) | 2275 |
| TauI | GCSGC | 1 cut(s) | 106 |
| Tru1I | TTAA | 4 cut(s) | 1481, 1572, 1769, 1934 |
| Tru9I | TTAA | 4 cut(s) | 1481, 1572, 1769, 1934 |
| TscAI | CASTG | 6 cut(s) | 474, 1243, 1874, 2032, 2409, 2416 |
| TseFI | GTSAC | 2 cut(s) | 1682, 2726 |
| TseI | GCWGC | 5 cut(s) | 1315, 2303, 2306, 2309, 2747 |
| Tsp45I | GTSAC | 2 cut(s) | 1682, 2726 |
| TspRI | CASTG | 6 cut(s) | 474, 1243, 1874, 2032, 2409, 2416 |
| VpaK11BI | GGWCC | 2 cut(s) | 1864, 2394 |
| XapI | RAATTY | 4 cut(s) | 1477, 1703, 2146, 2707 |
| XbaI | TCTAGA | 2 cut(s) | 616, 1072 |
| XceI | RCATGY | 2 cut(s) | 1070, 2196 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2227 |
| XmiI | GTMKAC | 1 cut(s) | 1651 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1921 |
| XspI | CTAG | 8 cut(s) | 24, 617, 1073, 1517, 1647, 1823, 2378, 2627 |
| Zsp2I | ATGCAT | 1 cut(s) | 1565 |