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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14650 |
| fragaria_vesca | FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 |
| malus_domestica | MD13G1201700.v1.1 MD16G1201900.v1.1 MD16G1202000.v1.1 |
| prunus_persica | Prupe.1G023500_v2.0.a1 Prupe.1G023500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0388601 |
| rosa_laevigata | RLG00000010035 |
| rosa_multiflora | Rmu_sc0004459.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00335060 |
| rosa_rugosa | Rorug03G0319200 Rorug03G0319200 |
| rosa_samantha | Rh4AG023600 Rh4BG016800 Rh4CG026300 Rh4DG017600 |
| rosa_wichuraiana | Rw0G009360 Rw4G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1681 |
| AccIII | TCCGGA | 1 cut(s) | 2437 |
| AciI | CCGC | 3 cut(s) | 11, 14, 1185 |
| AclWI | GGATC | 8 cut(s) | 341, 509, 815, 828, 1195, 1304, 1410, 2429 |
| AcsI | RAATTY | 3 cut(s) | 1507, 2176, 2725 |
| AfaI | GTAC | 2 cut(s) | 291, 1306 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 524, 1342, 1882, 2642 |
| AgeI | ACCGGT | 1 cut(s) | 940 |
| AjnI | CCWGG | 4 cut(s) | 116, 517, 1195, 1905 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1213, 1245 |
| Alw21I | GWGCWC | 2 cut(s) | 405, 2426 |
| Alw26I | GTCTC | 4 cut(s) | 471, 1871, 2123, 2251 |
| AlwI | GGATC | 8 cut(s) | 341, 509, 815, 828, 1195, 1304, 1410, 2429 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1706, 2756 |
| Ama87I | CYCGRG | 2 cut(s) | 711, 2479 |
| Aor13HI | TCCGGA | 1 cut(s) | 2437 |
| AoxI | GGCC | 3 cut(s) | 79, 1353, 1884 |
| ApeKI | GCWGC | 4 cut(s) | 31, 95, 127, 2765 |
| ApoI | RAATTY | 3 cut(s) | 1507, 2176, 2725 |
| AsiGI | ACCGGT | 1 cut(s) | 940 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1542, 1951 |
| AspLEI | GCGC | 1 cut(s) | 2799 |
| AspS9I | GGNCC | 6 cut(s) | 16, 50, 79, 1217, 1894, 2409 |
| AsuC2I | CCSGG | 1 cut(s) | 2807 |
| AsuHPI | GGTGA | 8 cut(s) | 356, 890, 1262, 1420, 1516, 1947, 2195, 2597 |
| AsuNHI | GCTAGC | 1 cut(s) | 91 |
| AvaI | CYCGRG | 2 cut(s) | 711, 2479 |
| AvaII | GGWCC | 5 cut(s) | 16, 50, 1217, 1894, 2409 |
| AxyI | CCTNAGG | 1 cut(s) | 1581 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 849, 882 |
| BamHI | GGATCC | 1 cut(s) | 820 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 2 cut(s) | 405, 2426 |
| BbvI | GCAGC | 4 cut(s) | 18, 82, 114, 2752 |
| BccI | CCATC | 5 cut(s) | 166, 620, 920, 1067, 1687 |
| BciT130I | CCWGG | 4 cut(s) | 118, 519, 1197, 1907 |
| BclI | TGATCA | 3 cut(s) | 802, 1788, 2847 |
| BcnI | CCSGG | 1 cut(s) | 2807 |
| BcoDI | GTCTC | 4 cut(s) | 471, 1871, 2123, 2251 |
| BfmI | CTRYAG | 4 cut(s) | 216, 1107, 1170, 1682 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 335 |
| BisI | GCNGC | 5 cut(s) | 12, 32, 96, 128, 2766 |
| BlpI | GCTNAGC | 1 cut(s) | 2572 |
| BlsI | GCNGC | 5 cut(s) | 13, 33, 97, 129, 2767 |
| Bme1390I | CCNGG | 5 cut(s) | 118, 519, 1197, 1907, 2807 |
| Bme18I | GGWCC | 5 cut(s) | 16, 50, 1217, 1894, 2409 |
| BmeT110I | CYCGRG | 2 cut(s) | 711, 2479 |
| BmgT120I | GGNCC | 6 cut(s) | 16, 50, 79, 1217, 1894, 2409 |
| BmiI | GGNNCC | 6 cut(s) | 115, 822, 975, 1018, 1827, 1948 |
| BmrFI | CCNGG | 5 cut(s) | 118, 519, 1197, 1907, 2807 |
| BmsI | GCATC | 4 cut(s) | 1321, 1457, 2151, 2262 |
| BmtI | GCTAGC | 1 cut(s) | 95 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1543, 1575, 2696, 2728 |
| BpmI | CTGGAG | 1 cut(s) | 1364 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1398 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2572 |
| BpuEI | CTTGAG | 2 cut(s) | 608, 1946 |
| BpuMI | CCSGG | 1 cut(s) | 2807 |
| BsaJI | CCNNGG | 5 cut(s) | 109, 117, 139, 1196, 1821 |
| BsaWI | WCCGGW | 3 cut(s) | 940, 2378, 2437 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 738, 768 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 524, 1342, 1882, 2642 |
| Bse118I | RCCGGY | 1 cut(s) | 940 |
| Bse1I | ACTGG | 4 cut(s) | 1347, 1897, 2055, 2761 |
| Bse21I | CCTNAGG | 1 cut(s) | 1581 |
| Bse3DI | GCAATG | 2 cut(s) | 835, 1489 |
| BseAI | TCCGGA | 1 cut(s) | 2437 |
| BseBI | CCWGG | 4 cut(s) | 118, 519, 1197, 1907 |
| BseDI | CCNNGG | 5 cut(s) | 109, 117, 139, 1196, 1821 |
| BseGI | GGATG | 7 cut(s) | 421, 622, 868, 1069, 1336, 1698, 1849 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 524, 1342, 1882, 2642 |
| BseMI | GCAATG | 2 cut(s) | 835, 1489 |
| BseMII | CTCAG | 7 cut(s) | 1257, 1392, 1491, 1881, 2259, 2586, 2763 |
| BseNI | ACTGG | 4 cut(s) | 1347, 1897, 2055, 2761 |
| BseRI | GAGGAG | 3 cut(s) | 986, 1838, 2636 |
| BseXI | GCAGC | 4 cut(s) | 18, 82, 114, 2752 |
| BshFI | GGCC | 3 cut(s) | 81, 1355, 1886 |
| BshTI | ACCGGT | 1 cut(s) | 940 |
| BsiHKAI | GWGCWC | 2 cut(s) | 405, 2426 |
| BsiHKCI | CYCGRG | 2 cut(s) | 711, 2479 |
| BsiSI | CCGG | 4 cut(s) | 941, 2379, 2438, 2806 |
| BslFI | GGGAC | 1 cut(s) | 643 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 524, 1342, 1882, 2642 |
| BsmAI | GTCTC | 4 cut(s) | 471, 1871, 2123, 2251 |
| BsmBI | CGTCTC | 1 cut(s) | 1871 |
| BsmFI | GGGAC | 1 cut(s) | 643 |
| BsnI | GGCC | 3 cut(s) | 81, 1355, 1886 |
| BsoBI | CYCGRG | 2 cut(s) | 711, 2479 |
| Bsp1286I | GDGCHC | 2 cut(s) | 405, 2426 |
| Bsp13I | TCCGGA | 1 cut(s) | 2437 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2572 |
| Bsp19I | CCATGG | 1 cut(s) | 139 |
| BspACI | CCGC | 3 cut(s) | 11, 14, 1185 |
| BspANI | GGCC | 3 cut(s) | 81, 1355, 1886 |
| BspCNI | CTCAG | 7 cut(s) | 1258, 1391, 1492, 1882, 2260, 2585, 2762 |
| BspEI | TCCGGA | 1 cut(s) | 2437 |
| BspHI | TCATGA | 2 cut(s) | 316, 772 |
| BspLI | GGNNCC | 6 cut(s) | 115, 822, 975, 1018, 1827, 1948 |
| BspOI | GCTAGC | 1 cut(s) | 95 |
| BspPI | GGATC | 8 cut(s) | 341, 509, 815, 828, 1195, 1304, 1410, 2429 |
| BspQI | GCTCTTC | 2 cut(s) | 393, 1377 |
| BsrDI | GCAATG | 2 cut(s) | 835, 1489 |
| BsrFI | RCCGGY | 1 cut(s) | 940 |
| BsrI | ACTGG | 4 cut(s) | 1347, 1897, 2055, 2761 |
| BssAI | RCCGGY | 1 cut(s) | 940 |
| BssECI | CCNNGG | 5 cut(s) | 109, 117, 139, 1196, 1821 |
| BssT1I | CCWWGG | 2 cut(s) | 109, 139 |
| Bst2UI | CCWGG | 4 cut(s) | 118, 519, 1197, 1907 |
| Bst6I | CTCTTC | 7 cut(s) | 201, 393, 1377, 1763, 1986, 2003, 2652 |
| BstC8I | GCNNGC | 4 cut(s) | 43, 93, 229, 685 |
| BstDSI | CCRYGG | 1 cut(s) | 139 |
| BstF5I | GGATG | 7 cut(s) | 421, 622, 868, 1069, 1336, 1698, 1849 |
| BstHHI | GCGC | 1 cut(s) | 2799 |
| BstMAI | GTCTC | 4 cut(s) | 471, 1871, 2123, 2251 |
| BstNI | CCWGG | 4 cut(s) | 118, 519, 1197, 1907 |
| BstNSI | RCATGY | 1 cut(s) | 1097 |
| BstSCI | CCNGG | 5 cut(s) | 116, 517, 1195, 1905, 2805 |
| BstSFI | CTRYAG | 4 cut(s) | 216, 1107, 1170, 1682 |
| BstV1I | GCAGC | 4 cut(s) | 18, 82, 114, 2752 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BstX2I | RGATCY | 1 cut(s) | 820 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 146, 2062 |
| BstYI | RGATCY | 1 cut(s) | 820 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1581 |
| BsuRI | GGCC | 3 cut(s) | 81, 1355, 1886 |
| BtgI | CCRYGG | 1 cut(s) | 139 |
| BtsCI | GGATG | 7 cut(s) | 421, 622, 868, 1069, 1336, 1698, 1849 |
| BtsI | GCAGTG | 2 cut(s) | 52, 72 |
| BtsIMutI | CAGTG | 9 cut(s) | 52, 72, 503, 1263, 1340, 1904, 2062, 2424, 2424 |
| Cac8I | GCNNGC | 4 cut(s) | 43, 93, 229, 685 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1706, 2756 |
| CciI | TCATGA | 2 cut(s) | 316, 772 |
| CfoI | GCGC | 1 cut(s) | 2799 |
| Cfr10I | RCCGGY | 1 cut(s) | 940 |
| Cfr13I | GGNCC | 6 cut(s) | 16, 50, 79, 1217, 1894, 2409 |
| CpoI | CGGWCCG | 1 cut(s) | 16 |
| CseI | GACGC | 2 cut(s) | 361, 1853 |
| Csp6I | GTAC | 2 cut(s) | 290, 1305 |
| CspAI | ACCGGT | 1 cut(s) | 940 |
| CspI | CGGWCCG | 1 cut(s) | 16 |
| CviQI | GTAC | 2 cut(s) | 290, 1305 |
| Eam1104I | CTCTTC | 7 cut(s) | 201, 393, 1377, 1763, 1986, 2003, 2652 |
| EarI | CTCTTC | 7 cut(s) | 201, 393, 1377, 1763, 1986, 2003, 2652 |
| Eco130I | CCWWGG | 2 cut(s) | 109, 139 |
| Eco147I | AGGCCT | 2 cut(s) | 1355, 1886 |
| Eco47I | GGWCC | 5 cut(s) | 16, 50, 1217, 1894, 2409 |
| Eco81I | CCTNAGG | 1 cut(s) | 1581 |
| Eco88I | CYCGRG | 2 cut(s) | 711, 2479 |
| EcoRI | GAATTC | 2 cut(s) | 2176, 2725 |
| EcoRII | CCWGG | 4 cut(s) | 116, 517, 1195, 1905 |
| EcoT14I | CCWWGG | 2 cut(s) | 109, 139 |
| EcoT22I | ATGCAT | 1 cut(s) | 1595 |
| ErhI | CCWWGG | 2 cut(s) | 109, 139 |
| Esp3I | CGTCTC | 1 cut(s) | 1871 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1213, 1245 |
| FaqI | GGGAC | 1 cut(s) | 643 |
| FauNDI | CATATG | 1 cut(s) | 1453 |
| FbaI | TGATCA | 3 cut(s) | 802, 1788, 2847 |
| FblI | GTMKAC | 1 cut(s) | 1681 |
| Fnu4HI | GCNGC | 5 cut(s) | 12, 32, 96, 128, 2766 |
| FokI | GGATG | 7 cut(s) | 408, 629, 855, 1076, 1343, 1705, 1856 |
| Fsp4HI | GCNGC | 5 cut(s) | 12, 32, 96, 128, 2766 |
| GlaI | GCGC | 1 cut(s) | 2798 |
| GluI | GCNGC | 5 cut(s) | 12, 32, 96, 128, 2766 |
| GsuI | CTGGAG | 1 cut(s) | 1364 |
| HaeIII | GGCC | 3 cut(s) | 81, 1355, 1886 |
| HapII | CCGG | 4 cut(s) | 941, 2379, 2438, 2806 |
| HgaI | GACGC | 2 cut(s) | 361, 1853 |
| HhaI | GCGC | 1 cut(s) | 2799 |
| Hin6I | GCGC | 1 cut(s) | 2797 |
| HinP1I | GCGC | 1 cut(s) | 2797 |
| HincII | GTYRAC | 1 cut(s) | 1965 |
| HindII | GTYRAC | 1 cut(s) | 1965 |
| HindIII | AAGCTT | 2 cut(s) | 225, 681 |
| HpaI | GTTAAC | 1 cut(s) | 1965 |
| HpaII | CCGG | 4 cut(s) | 941, 2379, 2438, 2806 |
| HphI | GGTGA | 8 cut(s) | 356, 890, 1262, 1420, 1516, 1947, 2195, 2597 |
| Hpy166II | GTNNAC | 3 cut(s) | 881, 1682, 1965 |
| Hpy8I | GTNNAC | 3 cut(s) | 881, 1682, 1965 |
| Hpy99I | CGWCG | 2 cut(s) | 24, 58 |
| HpyAV | CCTTC | 6 cut(s) | 296, 301, 988, 2400, 2647, 2727 |
| HspAI | GCGC | 1 cut(s) | 2797 |
| Kpn2I | TCCGGA | 1 cut(s) | 2437 |
| Ksp22I | TGATCA | 3 cut(s) | 802, 1788, 2847 |
| KspAI | GTTAAC | 1 cut(s) | 1965 |
| LguI | GCTCTTC | 2 cut(s) | 393, 1377 |
| LmnI | GCTCC | 6 cut(s) | 746, 973, 1345, 1489, 1825, 2773 |
| Lsp1109I | GCAGC | 4 cut(s) | 18, 82, 114, 2752 |
| LweI | GCATC | 4 cut(s) | 1321, 1457, 2151, 2262 |
| MfeI | CAATTG | 1 cut(s) | 2851 |
| MflI | RGATCY | 1 cut(s) | 820 |
| MhlI | GDGCHC | 2 cut(s) | 405, 2426 |
| MlyI | GAGTC | 5 cut(s) | 1136, 2144, 2624, 2633, 2741 |
| MmeI | TCCRAC | 7 cut(s) | 43, 1159, 1520, 1614, 2231, 2795, 2847 |
| Mph1103I | ATGCAT | 1 cut(s) | 1595 |
| MroI | TCCGGA | 1 cut(s) | 2437 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1542, 1951 |
| MseI | TTAA | 4 cut(s) | 1511, 1602, 1799, 1964 |
| MslI | CAYNNNNRTG | 1 cut(s) | 261 |
| MspI | CCGG | 4 cut(s) | 941, 2379, 2438, 2806 |
| MspR9I | CCNGG | 5 cut(s) | 118, 519, 1197, 1907, 2807 |
| MunI | CAATTG | 1 cut(s) | 2851 |
| MvaI | CCWGG | 4 cut(s) | 118, 519, 1197, 1907 |
| NciI | CCSGG | 1 cut(s) | 2807 |
| NcoI | CCATGG | 1 cut(s) | 139 |
| NdeI | CATATG | 1 cut(s) | 1453 |
| NheI | GCTAGC | 1 cut(s) | 91 |
| NlaIV | GGNNCC | 6 cut(s) | 115, 822, 975, 1018, 1827, 1948 |
| NmeAIII | GCCGAG | 1 cut(s) | 1846 |
| NmuCI | GTSAC | 3 cut(s) | 1338, 1712, 2744 |
| NsiI | ATGCAT | 1 cut(s) | 1595 |
| NspI | RCATGY | 1 cut(s) | 1097 |
| PagI | TCATGA | 2 cut(s) | 316, 772 |
| PceI | AGGCCT | 2 cut(s) | 1355, 1886 |
| PciSI | GCTCTTC | 2 cut(s) | 393, 1377 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1542, 1951 |
| PfoI | TCCNGGA | 1 cut(s) | 517 |
| PinAI | ACCGGT | 1 cut(s) | 940 |
| PkrI | GCNGC | 5 cut(s) | 13, 33, 97, 129, 2767 |
| PleI | GAGTC | 5 cut(s) | 1135, 2144, 2623, 2632, 2741 |
| PpsI | GAGTC | 5 cut(s) | 1135, 2144, 2623, 2632, 2741 |
| Psp6I | CCWGG | 4 cut(s) | 116, 517, 1195, 1905 |
| PspGI | CCWGG | 4 cut(s) | 116, 517, 1195, 1905 |
| PspN4I | GGNNCC | 6 cut(s) | 115, 822, 975, 1018, 1827, 1948 |
| PspPI | GGNCC | 6 cut(s) | 16, 50, 79, 1217, 1894, 2409 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1706, 2756 |
| PsuI | RGATCY | 1 cut(s) | 820 |
| RsaI | GTAC | 2 cut(s) | 291, 1306 |
| RsaNI | GTAC | 2 cut(s) | 290, 1305 |
| RseI | CAYNNNNRTG | 1 cut(s) | 261 |
| Rsr2I | CGGWCCG | 1 cut(s) | 16 |
| RsrII | CGGWCCG | 1 cut(s) | 16 |
| SapI | GCTCTTC | 2 cut(s) | 393, 1377 |
| SaqAI | TTAA | 4 cut(s) | 1511, 1602, 1799, 1964 |
| SatI | GCNGC | 5 cut(s) | 12, 32, 96, 128, 2766 |
| Sau96I | GGNCC | 6 cut(s) | 16, 50, 79, 1217, 1894, 2409 |
| SchI | GAGTC | 5 cut(s) | 1136, 2144, 2624, 2633, 2741 |
| ScrFI | CCNGG | 5 cut(s) | 118, 519, 1197, 1907, 2807 |
| SduI | GDGCHC | 2 cut(s) | 405, 2426 |
| SfaNI | GCATC | 4 cut(s) | 1321, 1457, 2151, 2262 |
| SfcI | CTRYAG | 4 cut(s) | 216, 1107, 1170, 1682 |
| SinI | GGWCC | 5 cut(s) | 16, 50, 1217, 1894, 2409 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 261 |
| SmlI | CTYRAG | 2 cut(s) | 587, 1925 |
| SmoI | CTYRAG | 2 cut(s) | 587, 1925 |
| SseBI | AGGCCT | 2 cut(s) | 1355, 1886 |
| SsiI | CCGC | 3 cut(s) | 11, 14, 1185 |
| SspI | AATATT | 1 cut(s) | 2452 |
| StuI | AGGCCT | 2 cut(s) | 1355, 1886 |
| StyD4I | CCNGG | 5 cut(s) | 116, 517, 1195, 1905, 2805 |
| StyI | CCWWGG | 2 cut(s) | 109, 139 |
| TaqI | TCGA | 3 cut(s) | 905, 1239, 1523 |
| TauI | GCSGC | 1 cut(s) | 14 |
| Tru1I | TTAA | 4 cut(s) | 1511, 1602, 1799, 1964 |
| Tru9I | TTAA | 4 cut(s) | 1511, 1602, 1799, 1964 |
| TscAI | CASTG | 9 cut(s) | 52, 72, 510, 1270, 1347, 1904, 2062, 2424, 2431 |
| TseFI | GTSAC | 3 cut(s) | 1338, 1712, 2744 |
| TseI | GCWGC | 4 cut(s) | 31, 95, 127, 2765 |
| Tsp45I | GTSAC | 3 cut(s) | 1338, 1712, 2744 |
| TspGWI | ACGGA | 1 cut(s) | 42 |
| TspRI | CASTG | 9 cut(s) | 52, 72, 510, 1270, 1347, 1904, 2062, 2424, 2431 |
| VpaK11BI | GGWCC | 5 cut(s) | 16, 50, 1217, 1894, 2409 |
| XapI | RAATTY | 3 cut(s) | 1507, 2176, 2725 |
| XbaI | TCTAGA | 1 cut(s) | 1099 |
| XceI | RCATGY | 1 cut(s) | 1097 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2257 |
| XmiI | GTMKAC | 1 cut(s) | 1681 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1542, 1951 |
| Zsp2I | ATGCAT | 1 cut(s) | 1595 |