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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14650 |
| fragaria_vesca | FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 FvH4_4g01740 |
| malus_domestica | MD13G1201700.v1.1 MD16G1201900.v1.1 MD16G1202000.v1.1 |
| prunus_persica | Prupe.1G023500_v2.0.a1 Prupe.1G023500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0388601 |
| rosa_laevigata | RLG00000010035 |
| rosa_multiflora | Rmu_sc0004459.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00335060 |
| rosa_rugosa | Rorug03G0319200 Rorug03G0319200 |
| rosa_samantha | Rh4AG023600 Rh4BG016800 Rh4CG026300 Rh4DG017600 |
| rosa_wichuraiana | Rw0G009360 Rw4G001680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1075 |
| AccIII | TCCGGA | 1 cut(s) | 1813 |
| AclWI | GGATC | 5 cut(s) | 182, 350, 698, 804, 1805 |
| AcsI | RAATTY | 3 cut(s) | 901, 1546, 2098 |
| AcuI | CTGAAG | 7 cut(s) | 156, 276, 324, 785, 1626, 1846, 1914 |
| AfaI | GTAC | 2 cut(s) | 132, 700 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 736, 1252, 2018 |
| AjnI | CCWGG | 2 cut(s) | 589, 1275 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 607, 639 |
| Alw21I | GWGCWC | 2 cut(s) | 246, 1802 |
| Alw26I | GTCTC | 5 cut(s) | 312, 656, 1241, 1493, 1621 |
| AlwI | GGATC | 5 cut(s) | 182, 350, 698, 804, 1805 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1100, 2129 |
| Ama87I | CYCGRG | 1 cut(s) | 1855 |
| Aor13HI | TCCGGA | 1 cut(s) | 1813 |
| AoxI | GGCC | 1 cut(s) | 747 |
| ApeKI | GCWGC | 5 cut(s) | 1691, 1694, 1697, 1700, 2138 |
| ApoI | RAATTY | 3 cut(s) | 901, 1546, 2098 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 936, 1321 |
| AspLEI | GCGC | 1 cut(s) | 2172 |
| AspS9I | GGNCC | 3 cut(s) | 611, 1264, 1785 |
| AsuC2I | CCSGG | 2 cut(s) | 360, 2180 |
| AsuHPI | GGTGA | 7 cut(s) | 197, 656, 814, 910, 1317, 1565, 1973 |
| AvaI | CYCGRG | 1 cut(s) | 1855 |
| AvaII | GGWCC | 3 cut(s) | 611, 1264, 1785 |
| AxyI | CCTNAGG | 1 cut(s) | 975 |
| BanII | GRGCYC | 1 cut(s) | 1125 |
| Bbv12I | GWGCWC | 2 cut(s) | 246, 1802 |
| BbvI | GCAGC | 5 cut(s) | 1703, 1706, 1709, 1712, 2125 |
| BccI | CCATC | 4 cut(s) | 7, 461, 714, 1081 |
| BciT130I | CCWGG | 2 cut(s) | 591, 1277 |
| BclI | TGATCA | 2 cut(s) | 1182, 2220 |
| BcnI | CCSGG | 2 cut(s) | 360, 2180 |
| BcoDI | GTCTC | 5 cut(s) | 312, 656, 1241, 1493, 1621 |
| BfaI | CTAG | 8 cut(s) | 494, 608, 800, 941, 1071, 1223, 1769, 2018 |
| BfmI | CTRYAG | 4 cut(s) | 57, 501, 564, 1076 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 176 |
| BisI | GCNGC | 5 cut(s) | 1692, 1695, 1698, 1701, 2139 |
| BlsI | GCNGC | 5 cut(s) | 1693, 1696, 1699, 1702, 2140 |
| Bme1390I | CCNGG | 4 cut(s) | 360, 591, 1277, 2180 |
| Bme18I | GGWCC | 3 cut(s) | 611, 1264, 1785 |
| BmeT110I | CYCGRG | 1 cut(s) | 1855 |
| BmgT120I | GGNCC | 3 cut(s) | 611, 1264, 1785 |
| BmrFI | CCNGG | 4 cut(s) | 360, 591, 1277, 2180 |
| BmsI | GCATC | 5 cut(s) | 491, 715, 851, 1521, 1632 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 937, 969, 2069, 2101 |
| BpmI | CTGGAG | 2 cut(s) | 758, 1455 |
| BpuEI | CTTGAG | 2 cut(s) | 449, 1316 |
| BpuMI | CCSGG | 2 cut(s) | 360, 2180 |
| BsaJI | CCNNGG | 1 cut(s) | 590 |
| BsaWI | WCCGGW | 1 cut(s) | 1813 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 365, 366, 736, 1252, 2018 |
| Bse1I | ACTGG | 6 cut(s) | 191, 700, 741, 1267, 1425, 2134 |
| Bse21I | CCTNAGG | 1 cut(s) | 975 |
| BseAI | TCCGGA | 1 cut(s) | 1813 |
| BseBI | CCWGG | 2 cut(s) | 591, 1277 |
| BseDI | CCNNGG | 1 cut(s) | 590 |
| BseGI | GGATG | 5 cut(s) | 262, 463, 730, 1092, 1219 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 736, 1252, 2018 |
| BseMII | CTCAG | 6 cut(s) | 651, 786, 989, 1251, 1629, 2136 |
| BseNI | ACTGG | 6 cut(s) | 191, 700, 741, 1267, 1425, 2134 |
| BseRI | GAGGAG | 1 cut(s) | 2012 |
| BseXI | GCAGC | 5 cut(s) | 1703, 1706, 1709, 1712, 2125 |
| BshFI | GGCC | 1 cut(s) | 749 |
| BsiHKAI | GWGCWC | 2 cut(s) | 246, 1802 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1855 |
| BsiSI | CCGG | 3 cut(s) | 360, 1814, 2179 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 365, 366, 736, 1252, 2018 |
| BsmAI | GTCTC | 5 cut(s) | 312, 656, 1241, 1493, 1621 |
| BsmBI | CGTCTC | 2 cut(s) | 656, 1241 |
| BsnI | GGCC | 1 cut(s) | 749 |
| BsoBI | CYCGRG | 1 cut(s) | 1855 |
| Bsp1286I | GDGCHC | 3 cut(s) | 246, 1125, 1802 |
| Bsp13I | TCCGGA | 1 cut(s) | 1813 |
| BspANI | GGCC | 1 cut(s) | 749 |
| BspCNI | CTCAG | 6 cut(s) | 652, 785, 988, 1252, 1630, 2135 |
| BspEI | TCCGGA | 1 cut(s) | 1813 |
| BspHI | TCATGA | 1 cut(s) | 157 |
| BspPI | GGATC | 5 cut(s) | 182, 350, 698, 804, 1805 |
| BspQI | GCTCTTC | 2 cut(s) | 234, 771 |
| BsrI | ACTGG | 6 cut(s) | 191, 700, 741, 1267, 1425, 2134 |
| BssECI | CCNNGG | 1 cut(s) | 590 |
| Bst2UI | CCWGG | 2 cut(s) | 591, 1277 |
| Bst6I | CTCTTC | 7 cut(s) | 42, 234, 771, 1157, 1356, 1373, 2028 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 488 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstF5I | GGATG | 5 cut(s) | 262, 463, 730, 1092, 1219 |
| BstHHI | GCGC | 1 cut(s) | 2172 |
| BstMAI | GTCTC | 5 cut(s) | 312, 656, 1241, 1493, 1621 |
| BstNI | CCWGG | 2 cut(s) | 591, 1277 |
| BstNSI | RCATGY | 1 cut(s) | 491 |
| BstSCI | CCNGG | 4 cut(s) | 358, 589, 1275, 2178 |
| BstSFI | CTRYAG | 4 cut(s) | 57, 501, 564, 1076 |
| BstV1I | GCAGC | 5 cut(s) | 1703, 1706, 1709, 1712, 2125 |
| BstX2I | RGATCY | 1 cut(s) | 796 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1432 |
| BstYI | RGATCY | 1 cut(s) | 796 |
| Bsu36I | CCTNAGG | 1 cut(s) | 975 |
| BsuRI | GGCC | 1 cut(s) | 749 |
| BtsCI | GGATG | 5 cut(s) | 262, 463, 730, 1092, 1219 |
| BtsIMutI | CAGTG | 8 cut(s) | 198, 344, 657, 734, 1274, 1432, 1800, 1800 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1100, 2129 |
| CciI | TCATGA | 1 cut(s) | 157 |
| CfoI | GCGC | 1 cut(s) | 2172 |
| Cfr13I | GGNCC | 3 cut(s) | 611, 1264, 1785 |
| CseI | GACGC | 2 cut(s) | 202, 1223 |
| Csp6I | GTAC | 2 cut(s) | 131, 699 |
| CviQI | GTAC | 2 cut(s) | 131, 699 |
| Eam1104I | CTCTTC | 7 cut(s) | 42, 234, 771, 1157, 1356, 1373, 2028 |
| EarI | CTCTTC | 7 cut(s) | 42, 234, 771, 1157, 1356, 1373, 2028 |
| Eco147I | AGGCCT | 1 cut(s) | 749 |
| Eco24I | GRGCYC | 1 cut(s) | 1125 |
| Eco47I | GGWCC | 3 cut(s) | 611, 1264, 1785 |
| Eco57I | CTGAAG | 7 cut(s) | 156, 276, 324, 785, 1626, 1846, 1914 |
| Eco81I | CCTNAGG | 1 cut(s) | 975 |
| Eco88I | CYCGRG | 1 cut(s) | 1855 |
| EcoRI | GAATTC | 2 cut(s) | 1546, 2098 |
| EcoRII | CCWGG | 2 cut(s) | 589, 1275 |
| EcoT22I | ATGCAT | 1 cut(s) | 989 |
| EcoT38I | GRGCYC | 1 cut(s) | 1125 |
| Esp3I | CGTCTC | 2 cut(s) | 656, 1241 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 607, 639 |
| FauNDI | CATATG | 1 cut(s) | 847 |
| FbaI | TGATCA | 2 cut(s) | 1182, 2220 |
| FblI | GTMKAC | 1 cut(s) | 1075 |
| Fnu4HI | GCNGC | 5 cut(s) | 1692, 1695, 1698, 1701, 2139 |
| FokI | GGATG | 5 cut(s) | 249, 470, 737, 1099, 1226 |
| FriOI | GRGCYC | 1 cut(s) | 1125 |
| Fsp4HI | GCNGC | 5 cut(s) | 1692, 1695, 1698, 1701, 2139 |
| FspBI | CTAG | 8 cut(s) | 494, 608, 800, 941, 1071, 1223, 1769, 2018 |
| GlaI | GCGC | 1 cut(s) | 2171 |
| GluI | GCNGC | 5 cut(s) | 1692, 1695, 1698, 1701, 2139 |
| GsuI | CTGGAG | 2 cut(s) | 758, 1455 |
| HaeIII | GGCC | 1 cut(s) | 749 |
| HapII | CCGG | 3 cut(s) | 360, 1814, 2179 |
| HgaI | GACGC | 2 cut(s) | 202, 1223 |
| HhaI | GCGC | 1 cut(s) | 2172 |
| Hin6I | GCGC | 1 cut(s) | 2170 |
| HinP1I | GCGC | 1 cut(s) | 2170 |
| HincII | GTYRAC | 1 cut(s) | 1335 |
| HindII | GTYRAC | 1 cut(s) | 1335 |
| HindIII | AAGCTT | 1 cut(s) | 66 |
| HpaI | GTTAAC | 1 cut(s) | 1335 |
| HpaII | CCGG | 3 cut(s) | 360, 1814, 2179 |
| HphI | GGTGA | 7 cut(s) | 197, 656, 814, 910, 1317, 1565, 1973 |
| Hpy166II | GTNNAC | 2 cut(s) | 1076, 1335 |
| Hpy8I | GTNNAC | 2 cut(s) | 1076, 1335 |
| HpyAV | CCTTC | 5 cut(s) | 137, 142, 1776, 2023, 2100 |
| HpyCH4IV | ACGT | 1 cut(s) | 665 |
| HpyCH4V | TGCA | 8 cut(s) | 72, 331, 418, 482, 876, 987, 2063, 2213 |
| HpySE526I | ACGT | 1 cut(s) | 665 |
| HspAI | GCGC | 1 cut(s) | 2170 |
| Kpn2I | TCCGGA | 1 cut(s) | 1813 |
| Ksp22I | TGATCA | 2 cut(s) | 1182, 2220 |
| KspAI | GTTAAC | 1 cut(s) | 1335 |
| LguI | GCTCTTC | 2 cut(s) | 234, 771 |
| LmnI | GCTCC | 3 cut(s) | 739, 883, 2146 |
| Lsp1109I | GCAGC | 5 cut(s) | 1703, 1706, 1709, 1712, 2125 |
| LweI | GCATC | 5 cut(s) | 491, 715, 851, 1521, 1632 |
| MaeI | CTAG | 8 cut(s) | 494, 608, 800, 941, 1071, 1223, 1769, 2018 |
| MaeII | ACGT | 1 cut(s) | 665 |
| MaeIII | GTNAC | 8 cut(s) | 17, 541, 732, 947, 1106, 1657, 2117, 2125 |
| MfeI | CAATTG | 1 cut(s) | 2224 |
| MflI | RGATCY | 1 cut(s) | 796 |
| MhlI | GDGCHC | 3 cut(s) | 246, 1125, 1802 |
| MlyI | GAGTC | 5 cut(s) | 530, 1514, 2000, 2009, 2114 |
| MmeI | TCCRAC | 7 cut(s) | 553, 914, 1008, 1090, 1601, 2168, 2220 |
| Mph1103I | ATGCAT | 1 cut(s) | 989 |
| MroI | TCCGGA | 1 cut(s) | 1813 |
| MroXI | GAANNNNTTC | 2 cut(s) | 936, 1321 |
| MseI | TTAA | 4 cut(s) | 905, 996, 1193, 1334 |
| MslI | CAYNNNNRTG | 1 cut(s) | 102 |
| MspI | CCGG | 3 cut(s) | 360, 1814, 2179 |
| MspR9I | CCNGG | 4 cut(s) | 360, 591, 1277, 2180 |
| MunI | CAATTG | 1 cut(s) | 2224 |
| MvaI | CCWGG | 2 cut(s) | 591, 1277 |
| NciI | CCSGG | 2 cut(s) | 360, 2180 |
| NdeI | CATATG | 1 cut(s) | 847 |
| NmuCI | GTSAC | 3 cut(s) | 732, 1106, 2117 |
| NsiI | ATGCAT | 1 cut(s) | 989 |
| NspI | RCATGY | 1 cut(s) | 491 |
| PagI | TCATGA | 1 cut(s) | 157 |
| PceI | AGGCCT | 1 cut(s) | 749 |
| PciSI | GCTCTTC | 2 cut(s) | 234, 771 |
| PdmI | GAANNNNTTC | 2 cut(s) | 936, 1321 |
| PfoI | TCCNGGA | 1 cut(s) | 358 |
| PkrI | GCNGC | 5 cut(s) | 1693, 1696, 1699, 1702, 2140 |
| PleI | GAGTC | 5 cut(s) | 529, 1514, 1999, 2008, 2114 |
| PpsI | GAGTC | 5 cut(s) | 529, 1514, 1999, 2008, 2114 |
| Psp6I | CCWGG | 2 cut(s) | 589, 1275 |
| PspGI | CCWGG | 2 cut(s) | 589, 1275 |
| PspPI | GGNCC | 3 cut(s) | 611, 1264, 1785 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1100, 2129 |
| PsuI | RGATCY | 1 cut(s) | 796 |
| RsaI | GTAC | 2 cut(s) | 132, 700 |
| RsaNI | GTAC | 2 cut(s) | 131, 699 |
| RseI | CAYNNNNRTG | 1 cut(s) | 102 |
| SapI | GCTCTTC | 2 cut(s) | 234, 771 |
| SaqAI | TTAA | 4 cut(s) | 905, 996, 1193, 1334 |
| SatI | GCNGC | 5 cut(s) | 1692, 1695, 1698, 1701, 2139 |
| Sau96I | GGNCC | 3 cut(s) | 611, 1264, 1785 |
| SchI | GAGTC | 5 cut(s) | 530, 1514, 2000, 2009, 2114 |
| ScrFI | CCNGG | 4 cut(s) | 360, 591, 1277, 2180 |
| SduI | GDGCHC | 3 cut(s) | 246, 1125, 1802 |
| SfaNI | GCATC | 5 cut(s) | 491, 715, 851, 1521, 1632 |
| SfcI | CTRYAG | 4 cut(s) | 57, 501, 564, 1076 |
| SinI | GGWCC | 3 cut(s) | 611, 1264, 1785 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 102 |
| SmlI | CTYRAG | 2 cut(s) | 428, 1295 |
| SmoI | CTYRAG | 2 cut(s) | 428, 1295 |
| SseBI | AGGCCT | 1 cut(s) | 749 |
| SspI | AATATT | 1 cut(s) | 1828 |
| SspMI | CTAG | 8 cut(s) | 494, 608, 800, 941, 1071, 1223, 1769, 2018 |
| StuI | AGGCCT | 1 cut(s) | 749 |
| StyD4I | CCNGG | 4 cut(s) | 358, 589, 1275, 2178 |
| TaiI | ACGT | 1 cut(s) | 668 |
| Tru1I | TTAA | 4 cut(s) | 905, 996, 1193, 1334 |
| Tru9I | TTAA | 4 cut(s) | 905, 996, 1193, 1334 |
| TscAI | CASTG | 8 cut(s) | 198, 351, 664, 741, 1274, 1432, 1800, 1807 |
| TseFI | GTSAC | 3 cut(s) | 732, 1106, 2117 |
| TseI | GCWGC | 5 cut(s) | 1691, 1694, 1697, 1700, 2138 |
| Tsp45I | GTSAC | 3 cut(s) | 732, 1106, 2117 |
| TspDTI | ATGAA | 9 cut(s) | 146, 174, 251, 539, 1637, 1686, 1823, 1896, 2139 |
| TspRI | CASTG | 8 cut(s) | 198, 351, 664, 741, 1274, 1432, 1800, 1807 |
| VpaK11BI | GGWCC | 3 cut(s) | 611, 1264, 1785 |
| XapI | RAATTY | 3 cut(s) | 901, 1546, 2098 |
| XbaI | TCTAGA | 2 cut(s) | 493, 799 |
| XceI | RCATGY | 1 cut(s) | 491 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1627 |
| XmiI | GTMKAC | 1 cut(s) | 1075 |
| XmnI | GAANNNNTTC | 2 cut(s) | 936, 1321 |
| XspI | CTAG | 8 cut(s) | 494, 608, 800, 941, 1071, 1223, 1769, 2018 |
| Zsp2I | ATGCAT | 1 cut(s) | 989 |