Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013045

Physical Location & Seq

Genomic Coordinates Forward (+)

8513807 .. 8516360

Gene Structure 2554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGAGCCTCCTCTCCGCGGACGCACTTGGGTTACTTCTCAAGAATGCAATCTCCGCGAGTTCCATGCGTTTGGGTCGCGTCGTTCACGCAAGAATCGTCAAAACCCTCGATTCACCACCACCTCCGTTTCTCGCGAACTATCTCATCAACATGTACTCAAAACTCGACCATCCGGAATCAGCCCGACTCGTTCTCCGACTCACTCCTGCACGAAACGTCGTCTCTTGGACTTCACTTATCTCCGGACTTGCTCAGAACGGTCATTTCTCCACCGCTTTGGTTGAATTCTTCGAGATGCGACGAGAAGGTGTTGTTCCAAATGACTTCACTTTCCCTTGTGCTTTTAAAGCTGTGGCTTCTCTGCGTTTACCCGTTACTGGGAAGCAGATTCATGCGCTTGCTGTGAAGTGTGGTAGGATACTTGATGTGTTTGTTGGGTGTAGTGCTTTTGATATGTATTGCAAAACTAGGCTTAGAGATGATGCACGGAAGTTGTTCGATGAAATTCCTGAGAGGAACCTTGAAACTTGGAATGCTTTTATATCTAACTCTGTGACTGATGGAAGGCCTAGGGAAGCTATTGAAGCGTTTATTGAGTTTAGAAGGATTGATGGGCACCCGAATTCGATAACTTTTTGTGCTTTCCTTAATGCTTGTTCGGATTGGTTACACTTGAATCTAGGAATGCAGTTACACGGGCTTGTGTTACGAAGTGGGTTTGATACAGACGTCTCTGTTTGCAATGGGTTGATTGATTTCTATGGAAAGTGTAAGCAGATACGTAGCAGTGAGATTATCTTTACTGAAATGGGAACTAAAAATGCTGTTTCTTGGTGTTCATTGGTTGCTGCATATGTGCAGAATCATGAGGATGAGAAGGCGTCTGTATTATATTTACGCTCAAGGAAGGATATTGTTGAGACCTCTGATTTTATGATATCAAGTGTTCTGAGTGCGTGTGCTGGTATGGCTGGTCTTGAGTTGGGAAGATCGATACATGCTCACGCTGTGAAGGCGTGTGTTGAAAGGACTATATTTGTTGGAAGTGCCCTCGTTGACATGTATGGAAAATGTGGATGTATAGAAGATTCAGAACAAGCGTTTGATGAGATGCCTGAGAAGAACTTAGTGACTCGGAATTCATTGATCGGAGGATATGCTCATCAGGGTCAGGTTGATATGGCATTGGCTTTATTTGAAGAAATGGCACCACGTGGATGTGGTCCAACTCCAAATTATATGACTTTTGTGTCCTTGCTTTCCGCTTGTAGTAGAGCAGGGGCTGTGGAAAATGGTATGAAGATATTTGATTCGATGAGGAGTACTTATGGCATTGAGCCAGGGGCTGAGCATTATTCATGCATCGTGGACATGCTAGGGCGAGCGGGAATGGTAGAACGGGCTTATGAATTCATAAAGAAAATGCCAATTCAACCGACAATTTCGGTTTGGGGTGCTCTTCAGAATGCTTGTAGGATGCATGGTAAGCCACAGCTGGGATTACTAGCAGCTGAGAACCTTTTCAAACTCGACCCTAAGGATTCAGGCAACCACGTTCTGCTTTCCAATACGTTTGCAGCGGCTGGGAGGTGGGCGGAAGCCAACACCGTAAGAGAGGAGCTGAAAGGCGTAGGGATCAAGAAAGGAGCCGGATACAGTTGGATCACAGTGAAGAACCAAGTCCATGCCTTTCAAGCCAAGGACAGATCCCACATACTGAACAAAGAAATTCAAACAACGCTGGCCAAGCTAAGGAACGAAATGGAAGCTGCAGGGTACAAACCCGACCTGAAACTCTCGCTTTACGATCTGGAGGAAGAAGAAAAAGCAGCAGAAGTCTCGCACCACAGTGAGAAACTGGCTCTAGCATTTGGATTGTTATCTTTACCACTCAGTGTCCCAATCAGAATCACCAAGAACCTTAGAATCTGCGGAGATTGCCACAGCTTCTTCAAGTTTGTCTCTGGGAGTGTTAAACGAGAGATCATTGTGAGAGACAATAACCGGTTTCATCGGTTTAAAGATGGGATATGTTCTTGTAAGGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0006082 GO:0006084 GO:0006090 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009451 GO:0009987 GO:0016070 GO:0016125 GO:0016787 GO:0016788 GO:0019287 GO:0019288 GO:0019637 GO:0019682 GO:0019693 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0032787 GO:0033865 GO:0033875 GO:0034032 GO:0034046 GO:0034641 GO:0035383 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046490 GO:0048364 GO:0048731 GO:0048856 GO:0050790 GO:0051186 GO:0055086 GO:0065007 GO:0065009 GO:0070717 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0090407 GO:0097159 GO:0099402 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

684

Amino Acids

75.89

Weight (kDa)

8.13

Isoelectric Point (pI)

40.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	71 - 118	3.9e-09	PPR repeat family
PPR_2	PF13041	375 - 423	6.8e-09	PPR repeat family
PPR	PF01535	377 - 402	8.5e-06	PPR repeat
E_motif	PF20431	499 - 555	2.9e-14	E motif
DYW_deaminase	PF14432	592 - 684	1.1e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14850
fragaria_vesca	FvH4_6g27530
malus_domestica	MD13G1194200.v1.1
prunus_persica	Prupe.1G015100_v2.0.a1
pyrus_communis	pycom13g16650
rosa_chinensis	RchiOBHm_Chr2g0129921
rosa_laevigata	RLG00000019107 RLG00000019111
rosa_multiflora	Rmu_co8468659.1_g000001 Rmu_sc0009663.1_g000015
rosa_roxburghii	Rroxscaffold_2G00114230
rosa_rugosa	Rorug02G0290300 Rorug02G0290300 Rorug02G0290300
rosa_samantha	Rh2AG341700 Rh2BG349700 Rh2CG328900
rosa_wichuraiana	Rw2G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1249
AatII	GACGTC	1 cut(s)	732
AccB1I	GGYRCC	2 cut(s)	615, 1207
AccBSI	CCGCTC	1 cut(s)	1385
AccII	CGCG	4 cut(s)	17, 56, 78, 134
AccIII	TCCGGA	2 cut(s)	172, 242
AciI	CCGC	9 cut(s)	15, 17, 54, 273, 1263, 1385, 1580, 1595, 1932
AclWI	GGATC	3 cut(s)	1643, 1670, 1701
AcoI	YGGCCR	1 cut(s)	1743
AcsI	RAATTY	6 cut(s)	284, 504, 622, 1138, 1409, 1728
AcuI	CTGAAG	1 cut(s)	1445
AcvI	CACGTG	1 cut(s)	1214
AcyI	GRCGYC	2 cut(s)	729, 881
AdeI	CACNNNGTG	3 cut(s)	1009, 1214, 1895
AfaI	GTAC	3 cut(s)	155, 1324, 1778
AfiI	CCNNNNNNNGG	5 cut(s)	16, 377, 378, 1496, 1752
AflIII	ACRYGT	2 cut(s)	150, 1059
AgeI	ACCGGT	1 cut(s)	2004
AjnI	CCWGG	1 cut(s)	1339
AleI	CACNNNNGTG	1 cut(s)	1848
AluBI	AGCT	8 cut(s)	350, 578, 1495, 1511, 1621, 1750, 1769, 1947
AluI	AGCT	8 cut(s)	350, 578, 1495, 1511, 1621, 1750, 1769, 1947
Alw21I	GWGCWC	1 cut(s)	1459
Alw26I	GTCTC	6 cut(s)	226, 736, 914, 1843, 1966, 1989
AlwI	GGATC	3 cut(s)	1643, 1670, 1701
AlwNI	CAGNNNCTG	3 cut(s)	1283, 1346, 1583
Aor13HI	TCCGGA	2 cut(s)	172, 242
AoxI	GGCC	2 cut(s)	566, 1743
ApeKI	GCWGC	5 cut(s)	848, 1508, 1577, 1769, 1829
ApoI	RAATTY	6 cut(s)	284, 504, 622, 1138, 1409, 1728
AsiGI	ACCGGT	1 cut(s)	2004
Asp700I	GAANNNNTTC	2 cut(s)	494, 1520
AspA2I	CCTAGG	1 cut(s)	569
AspLEI	GCGC	1 cut(s)	397
AspS9I	GGNCC	1 cut(s)	1223
AsuHPI	GGTGA	2 cut(s)	105, 1903
AvaII	GGWCC	1 cut(s)	1223
AvrII	CCTAGG	1 cut(s)	569
AxyI	CCTNAGG	1 cut(s)	1536
BaeGI	GKGCMC	2 cut(s)	618, 1051
BaeI	ACNNNNGTAYC	2 cut(s)	714, 747
BalI	TGGCCA	1 cut(s)	1745
BanI	GGYRCC	2 cut(s)	615, 1207
BbrPI	CACGTG	1 cut(s)	1214
Bbv12I	GWGCWC	1 cut(s)	1459
BbvI	GCAGC	5 cut(s)	835, 1520, 1589, 1756, 1841
BccI	CCATC	4 cut(s)	177, 554, 605, 2018
BcgI	CGANNNNNNTGC	4 cut(s)	46, 80, 1821, 1855
BciT130I	CCWGG	1 cut(s)	1341
BciVI	GTATCC	2 cut(s)	411, 1646
BcoDI	GTCTC	6 cut(s)	226, 736, 914, 1843, 1966, 1989
BfaI	CTAG	6 cut(s)	468, 570, 680, 1376, 1505, 1865
BfmI	CTRYAG	1 cut(s)	1770
BfuI	GTATCC	2 cut(s)	411, 1646
BisI	GCNGC	6 cut(s)	849, 1509, 1578, 1581, 1770, 1830
BlnI	CCTAGG	1 cut(s)	569
BlpI	GCTNAGC	1 cut(s)	1347
BlsI	GCNGC	6 cut(s)	850, 1510, 1579, 1582, 1771, 1831
BmcAI	AGTACT	1 cut(s)	1324
Bme1390I	CCNGG	1 cut(s)	1341
Bme18I	GGWCC	1 cut(s)	1223
BmgT120I	GGNCC	1 cut(s)	1223
BmiI	GGNNCC	4 cut(s)	518, 617, 1209, 1648
BmrFI	CCNGG	1 cut(s)	1341
BmrI	ACTGGG	1 cut(s)	387
BmsI	GCATC	5 cut(s)	285, 472, 1101, 1371, 1467
BmuI	ACTGGG	1 cut(s)	387
BpmI	CTGGAG	1 cut(s)	1832
Bpu10I	CCTNAGC	1 cut(s)	1751
Bpu1102I	GCTNAGC	1 cut(s)	1347
BpuEI	CTTGAG	3 cut(s)	23, 886, 998
Bsa29I	ATCGAT	1 cut(s)	992
BsaAI	YACGTR	2 cut(s)	782, 1214
BsaBI	GATNNNNATC	1 cut(s)	1879
BsaHI	GRCGYC	2 cut(s)	729, 881
BsaI	GGTCTC	1 cut(s)	914
BsaJI	CCNNGG	4 cut(s)	15, 569, 1340, 1698
BsaWI	WCCGGW	3 cut(s)	172, 242, 2004
BsaXI	ACNNNNNCTCC	2 cut(s)	177, 207
Bsc4I	CCNNNNNNNGG	5 cut(s)	16, 377, 378, 1496, 1752
Bse118I	RCCGGY	1 cut(s)	2004
Bse1I	ACTGG	2 cut(s)	382, 1863
Bse21I	CCTNAGG	1 cut(s)	1536
Bse3DI	GCAATG	1 cut(s)	748
Bse8I	GATNNNNATC	1 cut(s)	1879
BseAI	TCCGGA	2 cut(s)	172, 242
BseBI	CCWGG	1 cut(s)	1341
BseCI	ATCGAT	1 cut(s)	992
BseDI	CCNNGG	4 cut(s)	15, 569, 1340, 1698
BseGI	GGATG	5 cut(s)	169, 877, 1082, 1223, 1482
BseJI	GATNNNNATC	1 cut(s)	1879
BseLI	CCNNNNNNNGG	5 cut(s)	16, 377, 378, 1496, 1752
BseMI	GCAATG	1 cut(s)	748
BseMII	CTCAG	7 cut(s)	266, 501, 941, 1107, 1338, 1503, 1906
BseNI	ACTGG	2 cut(s)	382, 1863
BseRI	GAGGAG	2 cut(s)	1333, 1631
BseSI	GKGCMC	2 cut(s)	618, 1051
BseXI	GCAGC	5 cut(s)	835, 1520, 1589, 1756, 1841
BseYI	CCCAGC	2 cut(s)	1495, 1583
BsgI	GTGCAG	2 cut(s)	192, 878
Bsh1236I	CGCG	4 cut(s)	17, 56, 78, 134
BshFI	GGCC	2 cut(s)	568, 1745
BshNI	GGYRCC	2 cut(s)	615, 1207
BshTI	ACCGGT	1 cut(s)	2004
BshVI	ATCGAT	1 cut(s)	992
BsiHKAI	GWGCWC	1 cut(s)	1459
BsiSI	CCGG	4 cut(s)	173, 243, 1650, 2005
BslFI	GGGAC	1 cut(s)	1883
BslI	CCNNNNNNNGG	5 cut(s)	16, 377, 378, 1496, 1752
BsmAI	GTCTC	6 cut(s)	226, 736, 914, 1843, 1966, 1989
BsmBI	CGTCTC	2 cut(s)	226, 736
BsmFI	GGGAC	1 cut(s)	1883
BsmI	GAATGC	4 cut(s)	49, 538, 690, 1471
BsnI	GGCC	2 cut(s)	568, 1745
Bso31I	GGTCTC	1 cut(s)	914
Bsp1286I	GDGCHC	3 cut(s)	618, 1051, 1459
Bsp13I	TCCGGA	2 cut(s)	172, 242
Bsp143I	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
Bsp1720I	GCTNAGC	1 cut(s)	1347
Bsp68I	TCGCGA	1 cut(s)	134
BspACI	CCGC	9 cut(s)	15, 17, 54, 273, 1263, 1385, 1580, 1595, 1932
BspANI	GGCC	2 cut(s)	568, 1745
BspCNI	CTCAG	7 cut(s)	265, 502, 942, 1108, 1339, 1504, 1905
BspDI	ATCGAT	1 cut(s)	992
BspEI	TCCGGA	2 cut(s)	172, 242
BspFNI	CGCG	4 cut(s)	17, 56, 78, 134
BspHI	TCATGA	1 cut(s)	865
BspLI	GGNNCC	4 cut(s)	518, 617, 1209, 1648
BspMAI	CTGCAG	1 cut(s)	1774
BspPI	GGATC	3 cut(s)	1643, 1670, 1701
BspQI	GCTCTTC	1 cut(s)	1464
BspT107I	GGYRCC	2 cut(s)	615, 1207
BspTNI	GGTCTC	1 cut(s)	914
BsrBI	CCGCTC	1 cut(s)	1385
BsrDI	GCAATG	1 cut(s)	748
BsrFI	RCCGGY	1 cut(s)	2004
BsrI	ACTGG	2 cut(s)	382, 1863
BssAI	RCCGGY	1 cut(s)	2004
BssECI	CCNNGG	4 cut(s)	15, 569, 1340, 1698
BssMI	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
BssNI	GRCGYC	2 cut(s)	729, 881
BssT1I	CCWWGG	2 cut(s)	569, 1698
Bst2UI	CCWGG	1 cut(s)	1341
Bst4CI	ACNGT	5 cut(s)	260, 1609, 1658, 1669, 1850
Bst6I	CTCTTC	1 cut(s)	1464
BstACI	GRCGYC	2 cut(s)	729, 881
BstBAI	YACGTR	2 cut(s)	782, 1214
BstC8I	GCNNGC	3 cut(s)	399, 1383, 1743
BstDSI	CCRYGG	1 cut(s)	15
BstF5I	GGATG	5 cut(s)	169, 877, 1082, 1223, 1482
BstFNI	CGCG	4 cut(s)	17, 56, 78, 134
BstHHI	GCGC	1 cut(s)	397
BstKTI	GATC	7 cut(s)	992, 1149, 1638, 1665, 1709, 1810, 1986
BstMAI	GTCTC	6 cut(s)	226, 736, 914, 1843, 1966, 1989
BstMBI	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 347, 584, 968, 1013, 1486, 1694, 1747, 1938
BstNI	CCWGG	1 cut(s)	1341
BstNSI	RCATGY	4 cut(s)	154, 1001, 1063, 1375
BstSCI	CCNGG	1 cut(s)	1339
BstSFI	CTRYAG	1 cut(s)	1770
BstSLI	GKGCMC	2 cut(s)	618, 1051
BstSNI	TACGTA	1 cut(s)	782
BstUI	CGCG	4 cut(s)	17, 56, 78, 134
BstV1I	GCAGC	5 cut(s)	835, 1520, 1589, 1756, 1841
BstX2I	RGATCY	1 cut(s)	1706
BstXI	CCANNNNNNTGG	2 cut(s)	70, 277
BstYI	RGATCY	1 cut(s)	1706
Bsu15I	ATCGAT	1 cut(s)	992
Bsu36I	CCTNAGG	1 cut(s)	1536
BsuI	GTATCC	2 cut(s)	411, 1646
BsuRI	GGCC	2 cut(s)	568, 1745
BsuTUI	ATCGAT	1 cut(s)	992
BtgI	CCRYGG	1 cut(s)	15
BtsCI	GGATG	5 cut(s)	169, 877, 1082, 1223, 1482
BtsI	GCAGTG	1 cut(s)	793
BtsIMutI	CAGTG	4 cut(s)	793, 1674, 1855, 1900
BtuMI	TCGCGA	1 cut(s)	134
Cac8I	GCNNGC	3 cut(s)	399, 1383, 1743
CaiI	CAGNNNCTG	3 cut(s)	1283, 1346, 1583
CciI	TCATGA	1 cut(s)	865
CfoI	GCGC	1 cut(s)	397
Cfr10I	RCCGGY	1 cut(s)	2004
Cfr13I	GGNCC	1 cut(s)	1223
Cfr42I	CCGCGG	1 cut(s)	18
ClaI	ATCGAT	1 cut(s)	992
CseI	GACGC	3 cut(s)	29, 67, 870
Csp6I	GTAC	3 cut(s)	154, 1323, 1777
CspAI	ACCGGT	1 cut(s)	2004
CviQI	GTAC	3 cut(s)	154, 1323, 1777
DpnI	GATC	7 cut(s)	991, 1148, 1637, 1664, 1708, 1809, 1985
DpnII	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
DraI	TTTAAA	2 cut(s)	346, 2020
DraIII	CACNNNGTG	3 cut(s)	1009, 1214, 1895
DrdI	GACNNNNNNGTC	1 cut(s)	1249
DseDI	GACNNNNNNGTC	1 cut(s)	1249
EaeI	YGGCCR	1 cut(s)	1743
Eam1104I	CTCTTC	1 cut(s)	1464
EarI	CTCTTC	1 cut(s)	1464
EciI	GGCGGA	1 cut(s)	1610
Eco105I	TACGTA	1 cut(s)	782
Eco130I	CCWWGG	2 cut(s)	569, 1698
Eco147I	AGGCCT	1 cut(s)	568
Eco31I	GGTCTC	1 cut(s)	914
Eco32I	GATATC	1 cut(s)	939
Eco47I	GGWCC	1 cut(s)	1223
Eco57I	CTGAAG	1 cut(s)	1445
Eco72I	CACGTG	1 cut(s)	1214
Eco81I	CCTNAGG	1 cut(s)	1536
EcoRI	GAATTC	4 cut(s)	284, 622, 1138, 1409
EcoRII	CCWGG	1 cut(s)	1339
EcoRV	GATATC	1 cut(s)	939
EcoT14I	CCWWGG	2 cut(s)	569, 1698
EcoT22I	ATGCAT	2 cut(s)	1364, 1482
ErhI	CCWWGG	2 cut(s)	569, 1698
Esp3I	CGTCTC	2 cut(s)	226, 736
FaqI	GGGAC	1 cut(s)	1883
FauI	CCCGC	1 cut(s)	1378
FauNDI	CATATG	1 cut(s)	853
Fnu4HI	GCNGC	6 cut(s)	849, 1509, 1578, 1581, 1770, 1830
FokI	GGATG	5 cut(s)	156, 884, 1089, 1230, 1489
Fsp4HI	GCNGC	6 cut(s)	849, 1509, 1578, 1581, 1770, 1830
FspBI	CTAG	6 cut(s)	468, 570, 680, 1376, 1505, 1865
GlaI	GCGC	1 cut(s)	396
GluI	GCNGC	6 cut(s)	849, 1509, 1578, 1581, 1770, 1830
GsaI	CCCAGC	2 cut(s)	1499, 1587
GsuI	CTGGAG	1 cut(s)	1832
HaeIII	GGCC	2 cut(s)	568, 1745
HapII	CCGG	4 cut(s)	173, 243, 1650, 2005
HgaI	GACGC	3 cut(s)	29, 67, 870
HhaI	GCGC	1 cut(s)	397
Hin1I	GRCGYC	2 cut(s)	729, 881
Hin6I	GCGC	1 cut(s)	395
HinP1I	GCGC	1 cut(s)	395
HincII	GTYRAC	1 cut(s)	1057
HindII	GTYRAC	1 cut(s)	1057
HpaII	CCGG	4 cut(s)	173, 243, 1650, 2005
HphI	GGTGA	2 cut(s)	105, 1903
Hpy166II	GTNNAC	4 cut(s)	85, 368, 1057, 1369
Hpy8I	GTNNAC	4 cut(s)	85, 368, 1057, 1369
Hpy99I	CGWCG	3 cut(s)	83, 221, 303
HpyAV	CCTTC	6 cut(s)	299, 558, 597, 871, 901, 1006
HpyCH4III	ACNGT	5 cut(s)	260, 1609, 1658, 1669, 1850
HpyCH4IV	ACGT	6 cut(s)	216, 729, 781, 1213, 1554, 1571
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 347, 584, 968, 1013, 1486, 1694, 1747, 1938
HpySE526I	ACGT	6 cut(s)	216, 729, 781, 1213, 1554, 1571
Hsp92I	GRCGYC	2 cut(s)	729, 881
HspAI	GCGC	1 cut(s)	395
Kpn2I	TCCGGA	2 cut(s)	172, 242
KspI	CCGCGG	1 cut(s)	18
Kzo9I	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
LguI	GCTCTTC	1 cut(s)	1464
LmnI	GCTCC	2 cut(s)	1618, 1646
Lsp1109I	GCAGC	5 cut(s)	835, 1520, 1589, 1756, 1841
LweI	GCATC	5 cut(s)	285, 472, 1101, 1371, 1467
MaeI	CTAG	6 cut(s)	468, 570, 680, 1376, 1505, 1865
MaeII	ACGT	6 cut(s)	216, 729, 781, 1213, 1554, 1571
MaeIII	GTNAC	7 cut(s)	30, 373, 553, 666, 690, 705, 1129
MalI	GATC	7 cut(s)	991, 1148, 1637, 1664, 1708, 1809, 1985
MbiI	CCGCTC	1 cut(s)	1385
MboI	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
MflI	RGATCY	1 cut(s)	1706
MhlI	GDGCHC	3 cut(s)	618, 1051, 1459
MlsI	TGGCCA	1 cut(s)	1745
MluCI	AATT	9 cut(s)	284, 504, 622, 1138, 1234, 1409, 1428, 1440, 1728
MluNI	TGGCCA	1 cut(s)	1745
MlyI	GAGTC	3 cut(s)	180, 192, 1126
MmeI	TCCRAC	4 cut(s)	220, 1021, 1250, 1640
Mox20I	TGGCCA	1 cut(s)	1745
Mph1103I	ATGCAT	2 cut(s)	1364, 1482
MroI	TCCGGA	2 cut(s)	172, 242
MroXI	GAANNNNTTC	2 cut(s)	494, 1520
MscI	TGGCCA	1 cut(s)	1745
MseI	TTAA	4 cut(s)	345, 648, 1974, 2019
MslI	CAYNNNNRTG	4 cut(s)	149, 870, 1216, 1848
Msp20I	TGGCCA	1 cut(s)	1745
MspA1I	CMGCKG	4 cut(s)	17, 1495, 1511, 1580
MspI	CCGG	4 cut(s)	173, 243, 1650, 2005
MspR9I	CCNGG	1 cut(s)	1341
Mva1269I	GAATGC	4 cut(s)	49, 538, 690, 1471
MvaI	CCWGG	1 cut(s)	1341
MvnI	CGCG	4 cut(s)	17, 56, 78, 134
MwoI	GCNNNNNNNGC	9 cut(s)	53, 347, 584, 968, 1013, 1486, 1694, 1747, 1938
NdeI	CATATG	1 cut(s)	853
NdeII	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
NlaIV	GGNNCC	4 cut(s)	518, 617, 1209, 1648
NmuCI	GTSAC	2 cut(s)	553, 1129
NruI	TCGCGA	1 cut(s)	134
NsiI	ATGCAT	2 cut(s)	1364, 1482
NspI	RCATGY	4 cut(s)	154, 1001, 1063, 1375
OliI	CACNNNNGTG	1 cut(s)	1848
PagI	TCATGA	1 cut(s)	865
PceI	AGGCCT	1 cut(s)	568
PciI	ACATGT	2 cut(s)	150, 1059
PciSI	GCTCTTC	1 cut(s)	1464
PcsI	WCGNNNNNNNCGW	1 cut(s)	93
PctI	GAATGC	4 cut(s)	49, 538, 690, 1471
PdmI	GAANNNNTTC	2 cut(s)	494, 1520
PinAI	ACCGGT	1 cut(s)	2004
PkrI	GCNGC	6 cut(s)	850, 1510, 1579, 1582, 1771, 1831
PleI	GAGTC	3 cut(s)	180, 192, 1126
PmaCI	CACGTG	1 cut(s)	1214
PmlI	CACGTG	1 cut(s)	1214
PpsI	GAGTC	3 cut(s)	180, 192, 1126
Ppu21I	YACGTR	2 cut(s)	782, 1214
PscI	ACATGT	2 cut(s)	150, 1059
Psp6I	CCWGG	1 cut(s)	1339
PspCI	CACGTG	1 cut(s)	1214
PspFI	CCCAGC	2 cut(s)	1495, 1583
PspGI	CCWGG	1 cut(s)	1339
PspN4I	GGNNCC	4 cut(s)	518, 617, 1209, 1648
PspPI	GGNCC	1 cut(s)	1223
PstI	CTGCAG	1 cut(s)	1774
PstNI	CAGNNNCTG	3 cut(s)	1283, 1346, 1583
PsuI	RGATCY	1 cut(s)	1706
PvuII	CAGCTG	2 cut(s)	1495, 1511
RruI	TCGCGA	1 cut(s)	134
RsaI	GTAC	3 cut(s)	155, 1324, 1778
RsaNI	GTAC	3 cut(s)	154, 1323, 1777
RseI	CAYNNNNRTG	4 cut(s)	149, 870, 1216, 1848
SacII	CCGCGG	1 cut(s)	18
SapI	GCTCTTC	1 cut(s)	1464
SaqAI	TTAA	4 cut(s)	345, 648, 1974, 2019
SatI	GCNGC	6 cut(s)	849, 1509, 1578, 1581, 1770, 1830
Sau3AI	GATC	7 cut(s)	989, 1146, 1635, 1662, 1706, 1807, 1983
Sau96I	GGNCC	1 cut(s)	1223
ScaI	AGTACT	1 cut(s)	1324
SchI	GAGTC	3 cut(s)	180, 192, 1126
ScrFI	CCNGG	1 cut(s)	1341
SduI	GDGCHC	3 cut(s)	618, 1051, 1459
SfaNI	GCATC	5 cut(s)	285, 472, 1101, 1371, 1467
SfcI	CTRYAG	1 cut(s)	1770
Sfr303I	CCGCGG	1 cut(s)	18
SgrBI	CCGCGG	1 cut(s)	18
SinI	GGWCC	1 cut(s)	1223
SmiMI	CAYNNNNRTG	4 cut(s)	149, 870, 1216, 1848
SmlI	CTYRAG	3 cut(s)	38, 901, 977
SmoI	CTYRAG	3 cut(s)	38, 901, 977
SnaBI	TACGTA	1 cut(s)	782
Sse9I	AATT	9 cut(s)	284, 504, 622, 1138, 1234, 1409, 1428, 1440, 1728
SseBI	AGGCCT	1 cut(s)	568
SsiI	CCGC	9 cut(s)	15, 17, 54, 273, 1263, 1385, 1580, 1595, 1932
SspMI	CTAG	6 cut(s)	468, 570, 680, 1376, 1505, 1865
StuI	AGGCCT	1 cut(s)	568
StyD4I	CCNGG	1 cut(s)	1339
StyI	CCWWGG	2 cut(s)	569, 1698
TaaI	ACNGT	5 cut(s)	260, 1609, 1658, 1669, 1850
TaiI	ACGT	6 cut(s)	219, 732, 784, 1216, 1557, 1574
TaqI	TCGA	8 cut(s)	108, 165, 291, 498, 626, 992, 1313, 1530
TasI	AATT	9 cut(s)	284, 504, 622, 1138, 1234, 1409, 1428, 1440, 1728
TatI	WGTACW	2 cut(s)	153, 1322
TauI	GCSGC	1 cut(s)	1583
Tru1I	TTAA	4 cut(s)	345, 648, 1974, 2019
Tru9I	TTAA	4 cut(s)	345, 648, 1974, 2019
TscAI	CASTG	4 cut(s)	793, 1674, 1855, 1900
TseFI	GTSAC	2 cut(s)	553, 1129
TseI	GCWGC	5 cut(s)	848, 1508, 1577, 1769, 1829
Tsp45I	GTSAC	2 cut(s)	553, 1129
TspDTI	ATGAA	9 cut(s)	380, 516, 828, 1131, 1313, 1347, 1402, 1422, 2000
TspGWI	ACGGA	2 cut(s)	114, 502
TspRI	CASTG	4 cut(s)	793, 1674, 1855, 1900
VpaK11BI	GGWCC	1 cut(s)	1223
XapI	RAATTY	6 cut(s)	284, 504, 622, 1138, 1409, 1728
XceI	RCATGY	4 cut(s)	154, 1001, 1063, 1375
XmaJI	CCTAGG	1 cut(s)	569
XmnI	GAANNNNTTC	2 cut(s)	494, 1520
XspI	CTAG	6 cut(s)	468, 570, 680, 1376, 1505, 1865
ZraI	GACGTC	1 cut(s)	730
ZrmI	AGTACT	1 cut(s)	1324
Zsp2I	ATGCAT	2 cut(s)	1364, 1482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.