Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013045

Physical Location & Seq

Genomic Coordinates Reverse (-)

1088007 .. 1090643

Gene Structure 2637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G015100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGCCATTCCTCACTCCCAACTCGCTCGCCTCCCTGGTCCAATCAGCCTTGTCGACTCAGTCCACTCGGCTCGGCAGAGCGGCACATGCCCAGATGATCAGAACCCTCGACGCCCCACTCCCTTCCTTCCTCTCCAACCACCTTGTCAACATGTATTCCAAACTCGACCTCCCCGACTCAGCCCAACTCGTCCTCCAACTCAACCCCTCTCGCTCCGTCGTCACCTGGACCGCCCTCATCGCCGGTTCTGTCCAAAACGGTCATTTCGCCTCCGCCATACTCCACTTCGCTAACATGCTACGCGAGTCTGTCCAGCCCAATGACTTCACCTTCCCCTGCGCCTTCAAGGCCTCTGGGTCGCTCCGCTTGCCTGCCACCGGAAAACAGGTCCATGCGCTTGCGGTTAAGGCCGGGCAGATATGCGATGTCTTTGTTGGCTGCAGTGCTTTTGATATGTACTGCAAAACGGGTCTGCGGGACGAGGCTCGGAAAGTGTTTGATGAAATGCCTGAGAGAAACCTTGCGACGTGGAATGCGTACATGTCTAATGCTGTGCTGGACGGGCGGCCGCAAAATGCAGTTTACAAGTTTATTGAGTTTCTGCGGGCGGGCGGGGAGCCTAATTCGATTACGTTCTGTGCATTTCTCAATGCGTGCTCGGATACGTCGAATTTGGAGCTCGGGAGACAGTTACATGGGTTTGTCATGAGATGCGGGTTTGGGAAAGATGTGTCGGTTTTAAATGGGCTTATTGACTTTTATGGGAAGTGCAGGGAGGTTGGGTCTTCTATGATGGTTTTTGATACAATTGATAAGCGGAATGATGTTTCTTGGTGTTCTTTGGTGGCTGCGTGTGTGCAAAATGATGAGGAGGAGATGGCATGTGAGTTATTTTTGCGGGCTAGGAAAGAAGGGGTTGAGCCGACTGATTTCATGGTTTCGAGTGTTCTAAGTGCTTGTTCTGGGCTTGCATGGCTTGAACAGGGTAGGTCAGTTCATGCAATTGCCGTGAAGGCATGTGTAGAGGGAAATCTCTTTGTTGGGAGTGCACTTGTTGACATGTATGGAAAATGTGGGAGTATAGAAGATGCCAAGTGCGCCTTCAATGGGATGCCTTCAAGGAACTTGATCTCTTGGAACGCGATGGTAGGCGGGTATGCGCATCAAGGACATGCCAACATGGCTTTGGTATTGTTTGAGGAAATGACTGTCCGAAGTCATGAGGTTAAACCCAATTACGTTACCTTGGTTTGTGTATTATCGGCATGCAGTAGGGCAGGGGCCGTGGAAACGGGGATGCAGATCTTTGAGTCAATGAAAGCAAAGTACGGAATTGAACCAGGGGCAGAGCATTATGCATGTGTTGTGGACTTGCTTGGAAGAGCTGGGATGGTAGAGCGTGCTTATGAGTTTATTACAAAGATGCCAATTCGTCCAACAATTTCCATTTGGGGGGCACTTCTCGGGGCTTGCAAAATGTATAGGAAGACAGAATTGGGGAGGGTTGCAGCTGATAAGTTATTTGAACTTGATCCTAAAGACTCTGGCAACCACGTGATTCTTTCTAATATGTTTGCAGCTGCTGGCAGGTGGGAAGAGGCCACTCTTGTGAGAAAGGGGATGAAGGATGTCGGGATCAAGAAGGGTGCAGGCTACAGTTGGATCGCCGTCAAGAATGCAGTCCACGTCTTCCAAGCGAAGGACACCTCCCACGAAAGGAATTCGGAGATTCAGGCAATGCTAACCAAGTTAAGGAGGGAAATGGAGAAAGCTGGGTACATTGCCGATACCAATTTTGCGCTGTTTGATTTAGAAGAAGAAGAAAAAGTATCAGAAGTTTGGTACCACAGCGAGAAGATTGCCCTTGCTTTTGGCCTCATAGCCATCCCTCCCGGGGTGCCTATAAGGATTACAAAGAACCTTAGGATCTGTGGTGATTGCCATGGTGCAATCAAATTCATCTCAGGCATTGTAGGTAGAGAAATTATTGTGAGAGATAACAATCGCTTTCATCGCTTTAGAGATGGTCATTGCTCGTGTAGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0006082 GO:0006084 GO:0006090 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009451 GO:0009987 GO:0016070 GO:0016125 GO:0016787 GO:0016788 GO:0019287 GO:0019288 GO:0019637 GO:0019682 GO:0019693 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0032787 GO:0033865 GO:0033875 GO:0034032 GO:0034046 GO:0034641 GO:0035383 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046490 GO:0048364 GO:0048731 GO:0048856 GO:0050790 GO:0051186 GO:0055086 GO:0065007 GO:0065009 GO:0070717 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0090407 GO:0097159 GO:0099402 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

685

Amino Acids

75.38

Weight (kDa)

7.49

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14850
fragaria_vesca	FvH4_6g27530
malus_domestica	MD13G1194200.v1.1
prunus_persica	Prupe.1G015100_v2.0.a1
pyrus_communis	pycom13g16650
rosa_chinensis	RchiOBHm_Chr2g0129921
rosa_laevigata	RLG00000019107 RLG00000019111
rosa_multiflora	Rmu_co8468659.1_g000001 Rmu_sc0009663.1_g000015
rosa_roxburghii	Rroxscaffold_2G00114230
rosa_rugosa	Rorug02G0290300 Rorug02G0290300 Rorug02G0290300
rosa_samantha	Rh2AG341700 Rh2BG349700 Rh2CG328900
rosa_wichuraiana	Rw2G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1578
Acc16I	TGCGCA	1 cut(s)	1161
Acc36I	ACCTGC	1 cut(s)	1578
Acc65I	GGTACC	1 cut(s)	1842
AccB1I	GGYRCC	2 cut(s)	1842, 1897
AccBSI	CCGCTC	1 cut(s)	80
AccI	GTMKAC	1 cut(s)	53
AccII	CGCG	2 cut(s)	303, 1142
AclWI	GGATC	4 cut(s)	1526, 1643, 1670, 1934
AcoI	YGGCCR	1 cut(s)	566
AcsI	RAATTY	3 cut(s)	670, 1720, 1955
AcvI	CACGTG	1 cut(s)	1555
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	5 cut(s)	458, 539, 1328, 1778, 1844
AfiI	CCNNNNNNNGG	7 cut(s)	377, 1107, 1452, 1699, 1716, 1752, 1894
AflIII	ACRYGT	3 cut(s)	150, 540, 1059
AgsI	TTSAA	6 cut(s)	346, 980, 1105, 1119, 1337, 1526
AjiI	CACGTC	2 cut(s)	528, 1687
AjnI	CCWGG	3 cut(s)	33, 224, 1339
AjuI	GAANNNNNNNTTGG	4 cut(s)	1085, 1117, 1478, 1510
AleI	CACNNNNGTG	1 cut(s)	1607
AluBI	AGCT	5 cut(s)	679, 1385, 1511, 1580, 1772
AluI	AGCT	5 cut(s)	679, 1385, 1511, 1580, 1772
Alw21I	GWGCWC	3 cut(s)	659, 681, 1051
Alw26I	GTCTC	1 cut(s)	679
Alw44I	GTGCAC	1 cut(s)	1047
AlwI	GGATC	4 cut(s)	1526, 1643, 1670, 1934
AlwNI	CAGNNNCTG	1 cut(s)	1583
Ama87I	CYCGRG	3 cut(s)	680, 1463, 1892
AoxI	GGCC	6 cut(s)	348, 408, 566, 1281, 1599, 1873
ApaLI	GTGCAC	1 cut(s)	1047
ApeKI	GCWGC	5 cut(s)	438, 848, 1508, 1577, 1580
ApoI	RAATTY	3 cut(s)	670, 1720, 1955
Asp718I	GGTACC	1 cut(s)	1842
AspLEI	GCGC	5 cut(s)	341, 397, 1100, 1162, 1801
AspS9I	GGNCC	4 cut(s)	37, 228, 388, 1281
AsuC2I	CCSGG	3 cut(s)	412, 1893, 1894
AsuHPI	GGTGA	3 cut(s)	214, 319, 1946
AvaI	CYCGRG	3 cut(s)	680, 1463, 1892
AvaII	GGWCC	3 cut(s)	37, 228, 388
AxyI	CCTNAGG	1 cut(s)	1922
BaeGI	GKGCMC	2 cut(s)	1051, 1459
BanI	GGYRCC	2 cut(s)	1842, 1897
BanII	GRGCYC	1 cut(s)	681
BauI	CACGAG	1 cut(s)	2035
BbrPI	CACGTG	1 cut(s)	1555
BbsI	GAAGAC	3 cut(s)	777, 1493, 1681
Bbv12I	GWGCWC	3 cut(s)	659, 681, 1051
BbvI	GCAGC	5 cut(s)	425, 835, 1520, 1567, 1589
BccI	CCATC	6 cut(s)	787, 871, 1138, 1384, 1892, 2018
BceAI	ACGGC	3 cut(s)	992, 1268, 1652
BcgI	CGANNNNNNTGC	2 cut(s)	1841, 1875
BciT130I	CCWGG	3 cut(s)	35, 226, 1341
BciVI	GTATCC	1 cut(s)	655
BclI	TGATCA	1 cut(s)	96
BcnI	CCSGG	3 cut(s)	412, 1893, 1894
BcoDI	GTCTC	1 cut(s)	679
BfaI	CTAG	1 cut(s)	903
BfmI	CTRYAG	2 cut(s)	439, 1654
BfuAI	ACCTGC	1 cut(s)	1578
BfuI	GTATCC	1 cut(s)	655
BglI	GCCNNNNNGGC	3 cut(s)	347, 1013, 1181
BglII	AGATCT	1 cut(s)	1302
BisI	GCNGC	8 cut(s)	81, 439, 566, 569, 849, 1509, 1578, 1581
BlsI	GCNGC	8 cut(s)	82, 440, 567, 570, 850, 1510, 1579, 1582
Bme1390I	CCNGG	6 cut(s)	35, 226, 412, 1341, 1893, 1894
Bme18I	GGWCC	3 cut(s)	37, 228, 388
BmeT110I	CYCGRG	3 cut(s)	680, 1463, 1892
BmgBI	CACGTC	2 cut(s)	528, 1687
BmgT120I	GGNCC	4 cut(s)	37, 228, 388, 1281
BmiI	GGNNCC	4 cut(s)	618, 1282, 1844, 1899
BmrFI	CCNGG	6 cut(s)	35, 226, 412, 1341, 1893, 1894
BmsI	GCATC	6 cut(s)	701, 1078, 1101, 1171, 1287, 1413
BpiI	GAAGAC	3 cut(s)	777, 1493, 1681
BpuMI	CCSGG	3 cut(s)	412, 1893, 1894
BsaAI	YACGTR	1 cut(s)	1555
BsaBI	GATNNNNATC	2 cut(s)	1301, 2001
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	7 cut(s)	33, 1245, 1284, 1340, 1892, 1893, 1942
BsaWI	WCCGGW	1 cut(s)	377
BsaXI	ACNNNNNCTCC	6 cut(s)	153, 177, 183, 207, 767, 797
Bsc4I	CCNNNNNNNGG	7 cut(s)	377, 1107, 1452, 1699, 1716, 1752, 1894
Bse118I	RCCGGY	1 cut(s)	242
Bse21I	CCTNAGG	1 cut(s)	1922
Bse3DI	GCAATG	3 cut(s)	1743, 1779, 2029
Bse8I	GATNNNNATC	2 cut(s)	1301, 2001
BseBI	CCWGG	3 cut(s)	35, 226, 1341
BseDI	CCNNGG	7 cut(s)	33, 1245, 1284, 1340, 1892, 1893, 1942
BseGI	GGATG	6 cut(s)	1116, 1302, 1395, 1626, 1633, 1884
BseJI	GATNNNNATC	2 cut(s)	1301, 2001
BseLI	CCNNNNNNNGG	7 cut(s)	377, 1107, 1452, 1699, 1716, 1752, 1894
BseMI	GCAATG	3 cut(s)	1743, 1779, 2029
BseMII	CTCAG	4 cut(s)	71, 192, 501, 1977
BseRI	GAGGAG	2 cut(s)	884, 887
BseSI	GKGCMC	2 cut(s)	1051, 1459
BseX3I	CGGCCG	1 cut(s)	566
BseXI	GCAGC	5 cut(s)	425, 835, 1520, 1567, 1589
BseYI	CCCAGC	2 cut(s)	1385, 1772
BsgI	GTGCAG	2 cut(s)	790, 1668
Bsh1236I	CGCG	2 cut(s)	303, 1142
Bsh1285I	CGRYCG	1 cut(s)	569
BshFI	GGCC	6 cut(s)	350, 410, 568, 1283, 1601, 1875
BshNI	GGYRCC	2 cut(s)	1842, 1897
BsiEI	CGRYCG	1 cut(s)	569
BsiHKAI	GWGCWC	3 cut(s)	659, 681, 1051
BsiHKCI	CYCGRG	3 cut(s)	680, 1463, 1892
BsiSI	CCGG	4 cut(s)	243, 378, 411, 1893
BslFI	GGGAC	1 cut(s)	491
BslI	CCNNNNNNNGG	7 cut(s)	377, 1107, 1452, 1699, 1716, 1752, 1894
BsmAI	GTCTC	1 cut(s)	679
BsmFI	GGGAC	1 cut(s)	491
BsmI	GAATGC	2 cut(s)	538, 1681
BsnI	GGCC	6 cut(s)	350, 410, 568, 1283, 1601, 1875
BsoBI	CYCGRG	3 cut(s)	680, 1463, 1892
Bsp1286I	GDGCHC	4 cut(s)	659, 681, 1051, 1459
Bsp143I	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
Bsp19I	CCATGG	1 cut(s)	1942
BspANI	GGCC	6 cut(s)	350, 410, 568, 1283, 1601, 1875
BspCNI	CTCAG	4 cut(s)	70, 191, 502, 1976
BspFNI	CGCG	2 cut(s)	303, 1142
BspHI	TCATGA	2 cut(s)	705, 1219
BspLI	GGNNCC	4 cut(s)	618, 1282, 1844, 1899
BspMAI	CTGCAG	1 cut(s)	443
BspMI	ACCTGC	1 cut(s)	1578
BspPI	GGATC	4 cut(s)	1526, 1643, 1670, 1934
BspQI	GCTCTTC	1 cut(s)	1375
BspT107I	GGYRCC	2 cut(s)	1842, 1897
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	3 cut(s)	1743, 1779, 2029
BsrFI	RCCGGY	1 cut(s)	242
BssAI	RCCGGY	1 cut(s)	242
BssECI	CCNNGG	7 cut(s)	33, 1245, 1284, 1340, 1892, 1893, 1942
BssMI	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
BssNI	GRCGYC	1 cut(s)	111
BssSI	CACGAG	1 cut(s)	2035
BssT1I	CCWWGG	2 cut(s)	1245, 1942
Bst2BI	CACGAG	1 cut(s)	2035
Bst2UI	CCWGG	3 cut(s)	35, 226, 1341
Bst4CI	ACNGT	4 cut(s)	260, 690, 1210, 1658
Bst6I	CTCTTC	2 cut(s)	1375, 1590
BstACI	GRCGYC	1 cut(s)	111
BstBAI	YACGTR	1 cut(s)	1555
BstDEI	CTNAG	6 cut(s)	57, 178, 510, 950, 1922, 1963
BstDSI	CCRYGG	2 cut(s)	1284, 1942
BstF5I	GGATG	6 cut(s)	1116, 1302, 1395, 1626, 1633, 1884
BstFNI	CGCG	2 cut(s)	303, 1142
BstHHI	GCGC	5 cut(s)	341, 397, 1100, 1162, 1801
BstKTI	GATC	7 cut(s)	99, 1131, 1305, 1534, 1638, 1665, 1929
BstMAI	GTCTC	1 cut(s)	679
BstMBI	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
BstMCI	CGRYCG	1 cut(s)	569
BstNI	CCWGG	3 cut(s)	35, 226, 1341
BstSCI	CCNGG	6 cut(s)	33, 224, 410, 1339, 1891, 1892
BstSFI	CTRYAG	2 cut(s)	439, 1654
BstSLI	GKGCMC	2 cut(s)	1051, 1459
BstUI	CGCG	2 cut(s)	303, 1142
BstV1I	GCAGC	5 cut(s)	425, 835, 1520, 1567, 1589
BstV2I	GAAGAC	3 cut(s)	777, 1493, 1681
BstX2I	RGATCY	2 cut(s)	1302, 1926
BstYI	RGATCY	2 cut(s)	1302, 1926
BstZI	CGGCCG	1 cut(s)	566
Bsu36I	CCTNAGG	1 cut(s)	1922
BsuI	GTATCC	1 cut(s)	655
BsuRI	GGCC	6 cut(s)	350, 410, 568, 1283, 1601, 1875
BtgI	CCRYGG	2 cut(s)	1284, 1942
BtgZI	GCGATG	4 cut(s)	223, 438, 1157, 1997
BtrI	CACGTC	2 cut(s)	528, 1687
BtsCI	GGATG	6 cut(s)	1116, 1302, 1395, 1626, 1633, 1884
BtsI	GCAGTG	1 cut(s)	448
BtsIMutI	CAGTG	1 cut(s)	448
BveI	ACCTGC	1 cut(s)	1578
CaiI	CAGNNNCTG	1 cut(s)	1583
CciI	TCATGA	2 cut(s)	705, 1219
CciNI	GCGGCCGC	1 cut(s)	566
CfoI	GCGC	5 cut(s)	341, 397, 1100, 1162, 1801
Cfr10I	RCCGGY	1 cut(s)	242
Cfr13I	GGNCC	4 cut(s)	37, 228, 388, 1281
Cfr9I	CCCGGG	1 cut(s)	1892
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	5 cut(s)	457, 538, 1327, 1777, 1843
CviQI	GTAC	5 cut(s)	457, 538, 1327, 1777, 1843
DdeI	CTNAG	6 cut(s)	57, 178, 510, 950, 1922, 1963
DpnI	GATC	7 cut(s)	98, 1130, 1304, 1533, 1637, 1664, 1928
DpnII	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
DraI	TTTAAA	1 cut(s)	741
EaeI	YGGCCR	1 cut(s)	566
EagI	CGGCCG	1 cut(s)	566
Eam1104I	CTCTTC	2 cut(s)	1375, 1590
EarI	CTCTTC	2 cut(s)	1375, 1590
EciI	GGCGGA	1 cut(s)	262
Ecl136II	GAGCTC	1 cut(s)	679
EclXI	CGGCCG	1 cut(s)	566
Eco130I	CCWWGG	2 cut(s)	1245, 1942
Eco147I	AGGCCT	1 cut(s)	350
Eco24I	GRGCYC	1 cut(s)	681
Eco47I	GGWCC	3 cut(s)	37, 228, 388
Eco52I	CGGCCG	1 cut(s)	566
Eco53kI	GAGCTC	1 cut(s)	679
Eco72I	CACGTG	1 cut(s)	1555
Eco81I	CCTNAGG	1 cut(s)	1922
Eco88I	CYCGRG	3 cut(s)	680, 1463, 1892
EcoICRI	GAGCTC	1 cut(s)	679
EcoRI	GAATTC	1 cut(s)	1720
EcoRII	CCWGG	3 cut(s)	33, 224, 1339
EcoT14I	CCWWGG	2 cut(s)	1245, 1942
EcoT22I	ATGCAT	1 cut(s)	1360
EcoT38I	GRGCYC	1 cut(s)	681
ErhI	CCWWGG	2 cut(s)	1245, 1942
FalI	AAGNNNNNCTT	2 cut(s)	1085, 1117
FaqI	GGGAC	1 cut(s)	491
FauI	CCCGC	7 cut(s)	468, 597, 601, 605, 707, 891, 1145
FbaI	TGATCA	1 cut(s)	96
FblI	GTMKAC	1 cut(s)	53
Fnu4HI	GCNGC	8 cut(s)	81, 439, 566, 569, 849, 1509, 1578, 1581
FokI	GGATG	6 cut(s)	1123, 1309, 1402, 1633, 1640, 1871
FriOI	GRGCYC	1 cut(s)	681
Fsp4HI	GCNGC	8 cut(s)	81, 439, 566, 569, 849, 1509, 1578, 1581
FspAI	RTGCGCAY	1 cut(s)	1161
FspBI	CTAG	1 cut(s)	903
FspI	TGCGCA	1 cut(s)	1161
GlaI	GCGC	5 cut(s)	340, 396, 1099, 1161, 1800
GluI	GCNGC	8 cut(s)	81, 439, 566, 569, 849, 1509, 1578, 1581
GsaI	CCCAGC	2 cut(s)	1389, 1776
HaeIII	GGCC	6 cut(s)	350, 410, 568, 1283, 1601, 1875
HapII	CCGG	4 cut(s)	243, 378, 411, 1893
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	5 cut(s)	341, 397, 1100, 1162, 1801
Hin1I	GRCGYC	1 cut(s)	111
Hin6I	GCGC	5 cut(s)	339, 395, 1098, 1160, 1799
HinP1I	GCGC	5 cut(s)	339, 395, 1098, 1160, 1799
HincII	GTYRAC	3 cut(s)	54, 148, 1057
HindII	GTYRAC	3 cut(s)	54, 148, 1057
HinfI	GANTC	7 cut(s)	55, 176, 305, 1310, 1541, 1558, 1729
HpaII	CCGG	4 cut(s)	243, 378, 411, 1893
HphI	GGTGA	3 cut(s)	214, 319, 1946
Hpy166II	GTNNAC	8 cut(s)	54, 63, 148, 583, 1049, 1057, 1369, 1684
Hpy188I	TCNGA	6 cut(s)	101, 489, 661, 1214, 1726, 1834
Hpy188III	TCNNGA	6 cut(s)	682, 706, 1220, 1633, 1639, 1672
Hpy8I	GTNNAC	8 cut(s)	54, 63, 148, 583, 1049, 1057, 1369, 1684
Hpy99I	CGWCG	4 cut(s)	113, 221, 529, 670
HpyCH4III	ACNGT	4 cut(s)	260, 690, 1210, 1658
HpyCH4IV	ACGT	6 cut(s)	527, 632, 665, 1239, 1554, 1686
HpyF3I	CTNAG	6 cut(s)	57, 178, 510, 950, 1922, 1963
HpySE526I	ACGT	6 cut(s)	527, 632, 665, 1239, 1554, 1686
Hsp92I	GRCGYC	1 cut(s)	111
HspAI	GCGC	5 cut(s)	339, 395, 1098, 1160, 1799
KpnI	GGTACC	1 cut(s)	1846
Ksp22I	TGATCA	1 cut(s)	96
Kzo9I	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
LguI	GCTCTTC	1 cut(s)	1375
LmnI	GCTCC	4 cut(s)	218, 366, 616, 676
Lsp1109I	GCAGC	5 cut(s)	425, 835, 1520, 1567, 1589
LweI	GCATC	6 cut(s)	701, 1078, 1101, 1171, 1287, 1413
MaeI	CTAG	1 cut(s)	903
MaeII	ACGT	6 cut(s)	527, 632, 665, 1239, 1554, 1686
MaeIII	GTNAC	3 cut(s)	220, 690, 1240
MalI	GATC	7 cut(s)	98, 1130, 1304, 1533, 1637, 1664, 1928
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
MfeI	CAATTG	2 cut(s)	807, 1002
MflI	RGATCY	2 cut(s)	1302, 1926
MhlI	GDGCHC	4 cut(s)	659, 681, 1051, 1459
MlyI	GAGTC	5 cut(s)	49, 170, 314, 1319, 1535
MmeI	TCCRAC	4 cut(s)	159, 220, 1460, 1640
Mph1103I	ATGCAT	1 cut(s)	1360
MseI	TTAA	4 cut(s)	405, 740, 1227, 1751
MslI	CAYNNNNRTG	1 cut(s)	1607
MspA1I	CMGCKG	2 cut(s)	1511, 1580
MspI	CCGG	4 cut(s)	243, 378, 411, 1893
MspR9I	CCNGG	6 cut(s)	35, 226, 412, 1341, 1893, 1894
MunI	CAATTG	2 cut(s)	807, 1002
Mva1269I	GAATGC	2 cut(s)	538, 1681
MvaI	CCWGG	3 cut(s)	35, 226, 1341
MvnI	CGCG	2 cut(s)	303, 1142
NciI	CCSGG	3 cut(s)	412, 1893, 1894
NcoI	CCATGG	1 cut(s)	1942
NdeII	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
NlaIV	GGNNCC	4 cut(s)	618, 1282, 1844, 1899
NmeAIII	GCCGAG	2 cut(s)	46, 51
NmuCI	GTSAC	1 cut(s)	220
NotI	GCGGCCGC	1 cut(s)	566
NsbI	TGCGCA	1 cut(s)	1161
NsiI	ATGCAT	1 cut(s)	1360
OliI	CACNNNNGTG	1 cut(s)	1607
PaeI	GCATGC	1 cut(s)	1269
PagI	TCATGA	2 cut(s)	705, 1219
PaqCI	CACCTGC	1 cut(s)	1578
PceI	AGGCCT	1 cut(s)	350
PciI	ACATGT	3 cut(s)	150, 540, 1059
PciSI	GCTCTTC	1 cut(s)	1375
PcsI	WCGNNNNNNNCGW	3 cut(s)	171, 533, 665
PctI	GAATGC	2 cut(s)	538, 1681
PfeI	GAWTC	2 cut(s)	1558, 1729
PflFI	GACNNNGTC	1 cut(s)	58
PkrI	GCNGC	8 cut(s)	82, 440, 567, 570, 850, 1510, 1579, 1582
PleI	GAGTC	5 cut(s)	49, 170, 313, 1318, 1535
PmaCI	CACGTG	1 cut(s)	1555
PmlI	CACGTG	1 cut(s)	1555
PpsI	GAGTC	5 cut(s)	49, 170, 313, 1318, 1535
Ppu21I	YACGTR	1 cut(s)	1555
PscI	ACATGT	3 cut(s)	150, 540, 1059
Psp124BI	GAGCTC	1 cut(s)	681
Psp6I	CCWGG	3 cut(s)	33, 224, 1339
PspCI	CACGTG	1 cut(s)	1555
PspFI	CCCAGC	2 cut(s)	1385, 1772
PspGI	CCWGG	3 cut(s)	33, 224, 1339
PspN4I	GGNNCC	4 cut(s)	618, 1282, 1844, 1899
PspPI	GGNCC	4 cut(s)	37, 228, 388, 1281
PstI	CTGCAG	1 cut(s)	443
PstNI	CAGNNNCTG	1 cut(s)	1583
PsuI	RGATCY	2 cut(s)	1302, 1926
PsyI	GACNNNGTC	1 cut(s)	58
PvuII	CAGCTG	2 cut(s)	1511, 1580
RsaI	GTAC	5 cut(s)	458, 539, 1328, 1778, 1844
RsaNI	GTAC	5 cut(s)	457, 538, 1327, 1777, 1843
RseI	CAYNNNNRTG	1 cut(s)	1607
SacI	GAGCTC	1 cut(s)	681
SalI	GTCGAC	1 cut(s)	52
SapI	GCTCTTC	1 cut(s)	1375
SaqAI	TTAA	4 cut(s)	405, 740, 1227, 1751
SatI	GCNGC	8 cut(s)	81, 439, 566, 569, 849, 1509, 1578, 1581
Sau3AI	GATC	7 cut(s)	96, 1128, 1302, 1531, 1635, 1662, 1926
Sau96I	GGNCC	4 cut(s)	37, 228, 388, 1281
SchI	GAGTC	5 cut(s)	49, 170, 314, 1319, 1535
ScrFI	CCNGG	6 cut(s)	35, 226, 412, 1341, 1893, 1894
SduI	GDGCHC	4 cut(s)	659, 681, 1051, 1459
SfaNI	GCATC	6 cut(s)	701, 1078, 1101, 1171, 1287, 1413
SfcI	CTRYAG	2 cut(s)	439, 1654
SinI	GGWCC	3 cut(s)	37, 228, 388
SmaI	CCCGGG	1 cut(s)	1894
SmiMI	CAYNNNNRTG	1 cut(s)	1607
SphI	GCATGC	1 cut(s)	1269
SseBI	AGGCCT	1 cut(s)	350
SspMI	CTAG	1 cut(s)	903
SstI	GAGCTC	1 cut(s)	681
StuI	AGGCCT	1 cut(s)	350
StyD4I	CCNGG	6 cut(s)	33, 224, 410, 1339, 1891, 1892
StyI	CCWWGG	2 cut(s)	1245, 1942
TaaI	ACNGT	4 cut(s)	260, 690, 1210, 1658
TaiI	ACGT	6 cut(s)	530, 635, 668, 1242, 1557, 1689
TaqI	TCGA	6 cut(s)	53, 108, 165, 626, 668, 941
TatI	WGTACW	1 cut(s)	456
TauI	GCSGC	3 cut(s)	83, 568, 571
TfiI	GAWTC	2 cut(s)	1558, 1729
Tru1I	TTAA	4 cut(s)	405, 740, 1227, 1751
Tru9I	TTAA	4 cut(s)	405, 740, 1227, 1751
TscAI	CASTG	1 cut(s)	448
TseFI	GTSAC	1 cut(s)	220
TseI	GCWGC	5 cut(s)	438, 848, 1508, 1577, 1580
Tsp45I	GTSAC	1 cut(s)	220
TspDTI	ATGAA	7 cut(s)	516, 922, 986, 1331, 1637, 1948, 2000
TspGWI	ACGGA	2 cut(s)	205, 1344
TspMI	CCCGGG	1 cut(s)	1892
TspRI	CASTG	1 cut(s)	448
Tth111I	GACNNNGTC	1 cut(s)	58
VneI	GTGCAC	1 cut(s)	1047
VpaK11BI	GGWCC	3 cut(s)	37, 228, 388
XapI	RAATTY	3 cut(s)	670, 1720, 1955
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1183
XmaI	CCCGGG	1 cut(s)	1892
XmiI	GTMKAC	1 cut(s)	53
XspI	CTAG	1 cut(s)	903
Zsp2I	ATGCAT	1 cut(s)	1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.