Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013045

Physical Location & Seq

Genomic Coordinates Reverse (-)

46569735 .. 46572029

Gene Structure 2295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019107

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGACCTTCCACACCAACAACAATGCCATCCCTCACTCCCAAGTTGGGAGTCCCAACTCCGTCGTCTCCCTTCTCCACAGCCGTCATTTCGCCTCCGCTCTCCTCCACTTCGCTAACATGCGTCGCCACTCCGTCCACCCCAATGACTTCACCTTCCCCTGCGCGTTCAAGGCCTCCTGCTTGCTTCTTCTCCCGGTGGTCGGAAAACAGGTGCATGCTCTCGCCGTTAAGGCGGGGCAGATATGTGATGTGTTCGTTGGGTGCAGTACTTCTGACATGTACTGCAAAACTGGTCTAAGAGACGATGCAGGGAAGGTGTTTGATGAAATGCCTGAGAGAAACCTTGCTACTTGGAATGCCTACATTTCGAATGCGGTGCTTGACAGCCGGCCAGTGAGTGCTGTAAACAAGTTTATTGAGTTTGTGAGGGCGGGTGGGGAGCCGAATTCGATTACCTTCTGTGCATTTCTCAATGCCTGTTCGAATACGTCGGCTTTGGAACTTGGGAGGCAGTTACATGGGTTTGTGGTGCGATGTGGGTTTGGGAAAGATGTGTCAGTGCTCAATGGGCTGGTGGATTTTTATGGGAAGTGTCGGGATGTTGGATCAGCTAAGATGGCTTTCGATAGAATTGGTGAGGCTACTCATGTCTCTTGGCCTCTTGGCGCTCCATGGCCTAGGAGAGAAGGGGTTGAGCCAACGGATTTCATGGTTTCAAGTGTTCTGAGTGCTTGTTCTGGACTAGCGTGGCTTGAACAAGGTAGGTCAGTTCATGCGCTTGCGGTGAAGGCTTGTGTGGATGGAAATGTCTTTATTGGGAGTGCACTCGTTGACATGTATGGGAAATGTGGGAGTATAGAAGATGCCGAGTGTGTATTTGATGCGATGCCTTCAAGGCTTGATCAGTTGGAATGCAATGGTAGGCAGATCTTTGATTCAATGAAACAAAGGTTTGGTGTTGAACCAGGGGCAGAGCATTATGCATGTGTTGTGGACTTGCTAGGGCGAGCTGGGATGGTAGAGCGCGCTTACGAGAAGCCAAAATTGGGGAAGATTGCGGCTGAAAAGTTATTTGAACTTGATCTTAAAGACTCTGGCAACCATGTGGTGCTTTCTAATTTGCTTGCGGCAACTGGCAGGTGGGAAGAAGCCACTCATGTGAGAAAGGAGATGAAAGATGTTGGCATCAAAAAGGGTGCAGGCTACAGTTGGATCGCAGTCAAGAATGCAGTCCACATCTCCCAAGCAAAGGATACCTCCCATGCAATGAATTCTGAAATTCAGGCAATGCTAACCTATTTAAGGAGGAAAATGGAGGAAGCTGGGTATGTTCCGGACACCAATTTTGCTCTGTTTGATTTAGAAGAAGAAGAGAAAGTATCGGAAGTTTGGTACCACAGCGAGAAGATTGCCCTTGCCTTTGGCCTCATATCTATCCCTTCTGGGTTGCCCATAAGGATTAACAAAAACTTTAGGATCTGTGGAGATTGCCATGGTGCAATCAAATTCATATCAGGTATTGTAGACAGAGAAATTACTGTCAAGGATAACAATCGTTTTCATCGCTTTAGAGATGATCATTGCTCCTGTAGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0006082 GO:0006084 GO:0006090 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009451 GO:0009987 GO:0016070 GO:0016125 GO:0016787 GO:0016788 GO:0019287 GO:0019288 GO:0019637 GO:0019682 GO:0019693 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0032787 GO:0033865 GO:0033875 GO:0034032 GO:0034046 GO:0034641 GO:0035383 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046490 GO:0048364 GO:0048731 GO:0048856 GO:0050790 GO:0051186 GO:0055086 GO:0065007 GO:0065009 GO:0070717 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0090407 GO:0097159 GO:0099402 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

535

Amino Acids

58.99

Weight (kDa)

6.7

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E_motif	PF20431	348 - 405	1.7e-16	E motif
DYW_deaminase	PF14432	442 - 534	6.4e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013045)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14850
fragaria_vesca	FvH4_6g27530
malus_domestica	MD13G1194200.v1.1
prunus_persica	Prupe.1G015100_v2.0.a1
pyrus_communis	pycom13g16650
rosa_chinensis	RchiOBHm_Chr2g0129921
rosa_laevigata	RLG00000019107 RLG00000019111
rosa_multiflora	Rmu_co8468659.1_g000001 Rmu_sc0009663.1_g000015
rosa_roxburghii	Rroxscaffold_2G00114230
rosa_rugosa	Rorug02G0290300 Rorug02G0290300 Rorug02G0290300
rosa_samantha	Rh2AG341700 Rh2BG349700 Rh2CG328900
rosa_wichuraiana	Rw2G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1128
Acc36I	ACCTGC	1 cut(s)	1128
Acc65I	GGTACC	1 cut(s)	1392
AccB1I	GGYRCC	1 cut(s)	1392
AccBSI	CCGCTC	1 cut(s)	98
AccI	GTMKAC	1 cut(s)	1524
AccII	CGCG	2 cut(s)	164, 1026
AccIII	TCCGGA	1 cut(s)	1333
AciI	CCGC	7 cut(s)	96, 233, 374, 431, 782, 1058, 1127
AclWI	GGATC	3 cut(s)	613, 1220, 1484
AcoI	YGGCCR	1 cut(s)	389
AcsI	RAATTY	4 cut(s)	445, 1270, 1278, 1505
AfaI	GTAC	3 cut(s)	268, 281, 1394
AfiI	CCNNNNNNNGG	5 cut(s)	45, 200, 1046, 1249, 1302
AflIII	ACRYGT	2 cut(s)	276, 834
AgsI	TTSAA	7 cut(s)	169, 717, 755, 894, 939, 962, 1076
AjnI	CCWGG	1 cut(s)	964
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
AleI	CACNNNNGTG	1 cut(s)	1157
AluBI	AGCT	3 cut(s)	611, 1010, 1322
AluI	AGCT	3 cut(s)	611, 1010, 1322
Alw21I	GWGCWC	2 cut(s)	564, 826
Alw26I	GTCTC	3 cut(s)	70, 294, 655
Alw44I	GTGCAC	1 cut(s)	822
AlwI	GGATC	3 cut(s)	613, 1220, 1484
Aor13HI	TCCGGA	1 cut(s)	1333
AoxI	GGCC	5 cut(s)	171, 389, 656, 674, 1423
ApaLI	GTGCAC	1 cut(s)	822
ApoI	RAATTY	4 cut(s)	445, 1270, 1278, 1505
ArsI	GACNNNNNNTTYG	2 cut(s)	1328, 1360
Asp718I	GGTACC	1 cut(s)	1392
AspA2I	CCTAGG	1 cut(s)	677
AspLEI	GCGC	5 cut(s)	164, 668, 778, 1026, 1028
AsuC2I	CCSGG	1 cut(s)	194
AsuHPI	GGTGA	3 cut(s)	142, 647, 796
AsuII	TTCGAA	2 cut(s)	368, 482
AvrII	CCTAGG	1 cut(s)	677
BaeGI	GKGCMC	1 cut(s)	826
BanI	GGYRCC	1 cut(s)	1392
Bbv12I	GWGCWC	2 cut(s)	564, 826
BccI	CCATC	4 cut(s)	35, 610, 794, 1009
BceAI	ACGGC	2 cut(s)	66, 209
BcgI	CGANNNNNNTGC	4 cut(s)	358, 392, 1391, 1425
BciT130I	CCWGG	1 cut(s)	966
BciVI	GTATCC	1 cut(s)	1246
BclI	TGATCA	2 cut(s)	901, 1576
BcnI	CCSGG	1 cut(s)	194
BcoDI	GTCTC	3 cut(s)	70, 294, 655
BfaI	CTAG	3 cut(s)	678, 743, 1001
BfmI	CTRYAG	2 cut(s)	1204, 1588
BfoI	RGCGCY	1 cut(s)	669
BfuAI	ACCTGC	1 cut(s)	1128
BfuI	GTATCC	1 cut(s)	1246
BglI	GCCNNNNNGGC	2 cut(s)	230, 895
BglII	AGATCT	1 cut(s)	927
BisI	GCNGC	2 cut(s)	1059, 1128
BlnI	CCTAGG	1 cut(s)	677
BlsI	GCNGC	2 cut(s)	1060, 1129
BmcAI	AGTACT	1 cut(s)	268
Bme1390I	CCNGG	2 cut(s)	194, 966
BmiI	GGNNCC	2 cut(s)	441, 1394
BmrFI	CCNGG	2 cut(s)	194, 966
BmsI	GCATC	5 cut(s)	295, 853, 871, 876, 1194
Bpu14I	TTCGAA	2 cut(s)	368, 482
BpuMI	CCSGG	1 cut(s)	194
BsaBI	GATNNNNATC	1 cut(s)	1551
BsaJI	CCNNGG	4 cut(s)	671, 677, 965, 1492
BsaWI	WCCGGW	1 cut(s)	1333
Bsc4I	CCNNNNNNNGG	5 cut(s)	45, 200, 1046, 1249, 1302
Bse118I	RCCGGY	1 cut(s)	387
Bse1I	ACTGG	3 cut(s)	295, 392, 1138
Bse3DI	GCAATG	4 cut(s)	922, 1272, 1293, 1579
Bse8I	GATNNNNATC	1 cut(s)	1551
BseAI	TCCGGA	1 cut(s)	1333
BseBI	CCWGG	1 cut(s)	966
BseDI	CCNNGG	4 cut(s)	671, 677, 965, 1492
BseGI	GGATG	4 cut(s)	27, 604, 805, 1020
BseJI	GATNNNNATC	1 cut(s)	1551
BseLI	CCNNNNNNNGG	5 cut(s)	45, 200, 1046, 1249, 1302
BseMI	GCAATG	4 cut(s)	922, 1272, 1293, 1579
BseMII	CTCAG	2 cut(s)	324, 716
BseNI	ACTGG	3 cut(s)	295, 392, 1138
BsePI	GCGCGC	1 cut(s)	1024
BseRI	GAGGAG	1 cut(s)	92
BseSI	GKGCMC	1 cut(s)	826
BseYI	CCCAGC	2 cut(s)	1010, 1322
BsgI	GTGCAG	2 cut(s)	283, 1218
Bsh1236I	CGCG	2 cut(s)	164, 1026
BshFI	GGCC	5 cut(s)	173, 391, 658, 676, 1425
BshNI	GGYRCC	1 cut(s)	1392
BsiHKAI	GWGCWC	2 cut(s)	564, 826
BsiSI	CCGG	3 cut(s)	194, 388, 1334
BslFI	GGGAC	1 cut(s)	36
BslI	CCNNNNNNNGG	5 cut(s)	45, 200, 1046, 1249, 1302
BsmAI	GTCTC	3 cut(s)	70, 294, 655
BsmBI	CGTCTC	2 cut(s)	70, 294
BsmFI	GGGAC	1 cut(s)	36
BsmI	GAATGC	4 cut(s)	361, 376, 917, 1231
BsnI	GGCC	5 cut(s)	173, 391, 658, 676, 1425
Bsp119I	TTCGAA	2 cut(s)	368, 482
Bsp1286I	GDGCHC	2 cut(s)	564, 826
Bsp13I	TCCGGA	1 cut(s)	1333
Bsp143I	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
Bsp19I	CCATGG	2 cut(s)	671, 1492
BspACI	CCGC	7 cut(s)	96, 233, 374, 431, 782, 1058, 1127
BspANI	GGCC	5 cut(s)	173, 391, 658, 676, 1425
BspCNI	CTCAG	2 cut(s)	325, 717
BspEI	TCCGGA	1 cut(s)	1333
BspFNI	CGCG	2 cut(s)	164, 1026
BspLI	GGNNCC	2 cut(s)	441, 1394
BspMI	ACCTGC	1 cut(s)	1128
BspPI	GGATC	3 cut(s)	613, 1220, 1484
BspT104I	TTCGAA	2 cut(s)	368, 482
BspT107I	GGYRCC	1 cut(s)	1392
BsrBI	CCGCTC	1 cut(s)	98
BsrDI	GCAATG	4 cut(s)	922, 1272, 1293, 1579
BsrFI	RCCGGY	1 cut(s)	387
BsrI	ACTGG	3 cut(s)	295, 392, 1138
BssAI	RCCGGY	1 cut(s)	387
BssECI	CCNNGG	4 cut(s)	671, 677, 965, 1492
BssHII	GCGCGC	1 cut(s)	1024
BssMI	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
BssT1I	CCWWGG	3 cut(s)	671, 677, 1492
Bst2UI	CCWGG	1 cut(s)	966
Bst4CI	ACNGT	2 cut(s)	1208, 1540
Bst6I	CTCTTC	1 cut(s)	1365
BstBI	TTCGAA	2 cut(s)	368, 482
BstC8I	GCNNGC	8 cut(s)	182, 216, 389, 780, 1008, 1026, 1125, 1201
BstDEI	CTNAG	4 cut(s)	296, 333, 612, 725
BstDSI	CCRYGG	2 cut(s)	671, 1492
BstENI	CCTNNNNNAGG	1 cut(s)	1300
BstF5I	GGATG	4 cut(s)	27, 604, 805, 1020
BstFNI	CGCG	2 cut(s)	164, 1026
BstH2I	RGCGCY	1 cut(s)	669
BstHHI	GCGC	5 cut(s)	164, 668, 778, 1026, 1028
BstKTI	GATC	7 cut(s)	608, 904, 930, 1084, 1215, 1479, 1579
BstMAI	GTCTC	3 cut(s)	70, 294, 655
BstMBI	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
BstMWI	GCNNNNNNNGC	6 cut(s)	170, 230, 568, 617, 788, 895
BstNI	CCWGG	1 cut(s)	966
BstNSI	RCATGY	5 cut(s)	121, 218, 280, 838, 987
BstSCI	CCNGG	2 cut(s)	192, 964
BstSFI	CTRYAG	2 cut(s)	1204, 1588
BstSLI	GKGCMC	1 cut(s)	826
BstUI	CGCG	2 cut(s)	164, 1026
BstX2I	RGATCY	2 cut(s)	927, 1476
BstYI	RGATCY	2 cut(s)	927, 1476
BsuI	GTATCC	1 cut(s)	1246
BsuRI	GGCC	5 cut(s)	173, 391, 658, 676, 1425
BtgI	CCRYGG	2 cut(s)	671, 1492
BtgZI	GCGATG	3 cut(s)	547, 899, 1547
BtsCI	GGATG	4 cut(s)	27, 604, 805, 1020
BtsIMutI	CAGTG	2 cut(s)	399, 564
BveI	ACCTGC	1 cut(s)	1128
Cac8I	GCNNGC	8 cut(s)	182, 216, 389, 780, 1008, 1026, 1125, 1201
CfoI	GCGC	5 cut(s)	164, 668, 778, 1026, 1028
Cfr10I	RCCGGY	1 cut(s)	387
CseI	GACGC	1 cut(s)	110
Csp6I	GTAC	3 cut(s)	267, 280, 1393
CviQI	GTAC	3 cut(s)	267, 280, 1393
DdeI	CTNAG	4 cut(s)	296, 333, 612, 725
DpnI	GATC	7 cut(s)	607, 903, 929, 1083, 1214, 1478, 1578
DpnII	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
EaeI	YGGCCR	1 cut(s)	389
Eam1104I	CTCTTC	1 cut(s)	1365
EarI	CTCTTC	1 cut(s)	1365
Eco130I	CCWWGG	3 cut(s)	671, 677, 1492
Eco147I	AGGCCT	1 cut(s)	173
EcoNI	CCTNNNNNAGG	1 cut(s)	1300
EcoRI	GAATTC	2 cut(s)	445, 1270
EcoRII	CCWGG	1 cut(s)	964
EcoT14I	CCWWGG	3 cut(s)	671, 677, 1492
EcoT22I	ATGCAT	1 cut(s)	985
ErhI	CCWWGG	3 cut(s)	671, 677, 1492
Esp3I	CGTCTC	2 cut(s)	70, 294
FaqI	GGGAC	1 cut(s)	36
FauI	CCCGC	2 cut(s)	226, 424
FbaI	TGATCA	2 cut(s)	901, 1576
FblI	GTMKAC	1 cut(s)	1524
Fnu4HI	GCNGC	2 cut(s)	1059, 1128
FokI	GGATG	4 cut(s)	14, 611, 812, 1027
Fsp4HI	GCNGC	2 cut(s)	1059, 1128
FspBI	CTAG	3 cut(s)	678, 743, 1001
GlaI	GCGC	5 cut(s)	163, 667, 777, 1025, 1027
GluI	GCNGC	2 cut(s)	1059, 1128
GsaI	CCCAGC	2 cut(s)	1014, 1326
HaeII	RGCGCY	1 cut(s)	669
HaeIII	GGCC	5 cut(s)	173, 391, 658, 676, 1425
HapII	CCGG	3 cut(s)	194, 388, 1334
HgaI	GACGC	1 cut(s)	110
HhaI	GCGC	5 cut(s)	164, 668, 778, 1026, 1028
Hin6I	GCGC	5 cut(s)	162, 666, 776, 1024, 1026
HinP1I	GCGC	5 cut(s)	162, 666, 776, 1024, 1026
HincII	GTYRAC	1 cut(s)	832
HindII	GTYRAC	1 cut(s)	832
HinfI	GANTC	3 cut(s)	49, 935, 1091
HpaII	CCGG	3 cut(s)	194, 388, 1334
HphI	GGTGA	3 cut(s)	142, 647, 796
Hpy166II	GTNNAC	7 cut(s)	136, 406, 824, 832, 994, 1234, 1525
Hpy188I	TCNGA	5 cut(s)	203, 274, 726, 1276, 1384
Hpy188III	TCNNGA	4 cut(s)	596, 738, 1222, 1334
Hpy8I	GTNNAC	7 cut(s)	136, 406, 824, 832, 994, 1234, 1525
Hpy99I	CGWCG	3 cut(s)	65, 126, 493
HpyAV	CCTTC	9 cut(s)	16, 80, 163, 307, 466, 680, 781, 900, 1449
HpyCH4III	ACNGT	2 cut(s)	1208, 1540
HpyCH4IV	ACGT	1 cut(s)	488
HpyF10VI	GCNNNNNNNGC	6 cut(s)	170, 230, 568, 617, 788, 895
HpyF3I	CTNAG	4 cut(s)	296, 333, 612, 725
HpySE526I	ACGT	1 cut(s)	488
HspAI	GCGC	5 cut(s)	162, 666, 776, 1024, 1026
Kpn2I	TCCGGA	1 cut(s)	1333
KpnI	GGTACC	1 cut(s)	1396
KroI	GCCGGC	1 cut(s)	387
KroNI	GCCGGC	1 cut(s)	389
Ksp22I	TGATCA	2 cut(s)	901, 1576
Kzo9I	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
LmnI	GCTCC	3 cut(s)	439, 673, 1589
LweI	GCATC	5 cut(s)	295, 853, 871, 876, 1194
MaeI	CTAG	3 cut(s)	678, 743, 1001
MaeII	ACGT	1 cut(s)	488
MaeIII	GTNAC	1 cut(s)	513
MalI	GATC	7 cut(s)	607, 903, 929, 1083, 1214, 1478, 1578
MbiI	CCGCTC	1 cut(s)	98
MboI	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
MboII	GAAGA	8 cut(s)	179, 872, 1063, 1157, 1376, 1379, 1382, 1417
MflI	RGATCY	2 cut(s)	927, 1476
MhlI	GDGCHC	2 cut(s)	564, 826
MluCI	AATT	9 cut(s)	445, 630, 1043, 1117, 1270, 1278, 1342, 1505, 1533
MlyI	GAGTC	2 cut(s)	58, 1085
MmeI	TCCRAC	4 cut(s)	181, 583, 888, 1190
Mph1103I	ATGCAT	1 cut(s)	985
MroI	TCCGGA	1 cut(s)	1333
MroNI	GCCGGC	1 cut(s)	387
MseI	TTAA	4 cut(s)	228, 1086, 1301, 1461
MslI	CAYNNNNRTG	2 cut(s)	141, 1157
MspI	CCGG	3 cut(s)	194, 388, 1334
MspR9I	CCNGG	2 cut(s)	194, 966
Mva1269I	GAATGC	4 cut(s)	361, 376, 917, 1231
MvaI	CCWGG	1 cut(s)	966
MvnI	CGCG	2 cut(s)	164, 1026
MwoI	GCNNNNNNNGC	6 cut(s)	170, 230, 568, 617, 788, 895
NaeI	GCCGGC	1 cut(s)	389
NciI	CCSGG	1 cut(s)	194
NcoI	CCATGG	2 cut(s)	671, 1492
NdeII	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
NgoMIV	GCCGGC	1 cut(s)	387
NlaIV	GGNNCC	2 cut(s)	441, 1394
NmeAIII	GCCGAG	1 cut(s)	892
NsiI	ATGCAT	1 cut(s)	985
NspI	RCATGY	5 cut(s)	121, 218, 280, 838, 987
NspV	TTCGAA	2 cut(s)	368, 482
OliI	CACNNNNGTG	1 cut(s)	1157
PaeI	GCATGC	1 cut(s)	218
PaqCI	CACCTGC	1 cut(s)	1128
PauI	GCGCGC	1 cut(s)	1024
PceI	AGGCCT	1 cut(s)	173
PciI	ACATGT	2 cut(s)	276, 834
PctI	GAATGC	4 cut(s)	361, 376, 917, 1231
PdiI	GCCGGC	1 cut(s)	389
PfeI	GAWTC	1 cut(s)	935
PkrI	GCNGC	2 cut(s)	1060, 1129
PleI	GAGTC	2 cut(s)	57, 1085
PpsI	GAGTC	2 cut(s)	57, 1085
PscI	ACATGT	2 cut(s)	276, 834
Psp6I	CCWGG	1 cut(s)	964
PspFI	CCCAGC	2 cut(s)	1010, 1322
PspGI	CCWGG	1 cut(s)	964
PspN4I	GGNNCC	2 cut(s)	441, 1394
PsuI	RGATCY	2 cut(s)	927, 1476
PteI	GCGCGC	1 cut(s)	1024
RsaI	GTAC	3 cut(s)	268, 281, 1394
RsaNI	GTAC	3 cut(s)	267, 280, 1393
RseI	CAYNNNNRTG	2 cut(s)	141, 1157
SaqAI	TTAA	4 cut(s)	228, 1086, 1301, 1461
SatI	GCNGC	2 cut(s)	1059, 1128
Sau3AI	GATC	7 cut(s)	605, 901, 927, 1081, 1212, 1476, 1576
ScaI	AGTACT	1 cut(s)	268
SchI	GAGTC	2 cut(s)	58, 1085
ScrFI	CCNGG	2 cut(s)	194, 966
SduI	GDGCHC	2 cut(s)	564, 826
SfaNI	GCATC	5 cut(s)	295, 853, 871, 876, 1194
SfcI	CTRYAG	2 cut(s)	1204, 1588
SfuI	TTCGAA	2 cut(s)	368, 482
SmiMI	CAYNNNNRTG	2 cut(s)	141, 1157
SphI	GCATGC	1 cut(s)	218
Sse9I	AATT	9 cut(s)	445, 630, 1043, 1117, 1270, 1278, 1342, 1505, 1533
SseBI	AGGCCT	1 cut(s)	173
SsiI	CCGC	7 cut(s)	96, 233, 374, 431, 782, 1058, 1127
SspMI	CTAG	3 cut(s)	678, 743, 1001
StuI	AGGCCT	1 cut(s)	173
StyD4I	CCNGG	2 cut(s)	192, 964
StyI	CCWWGG	3 cut(s)	671, 677, 1492
TaaI	ACNGT	2 cut(s)	1208, 1540
TaiI	ACGT	1 cut(s)	491
TaqI	TCGA	4 cut(s)	368, 449, 482, 624
TasI	AATT	9 cut(s)	445, 630, 1043, 1117, 1270, 1278, 1342, 1505, 1533
TatI	WGTACW	2 cut(s)	266, 279
TauI	GCSGC	2 cut(s)	1061, 1130
TfiI	GAWTC	1 cut(s)	935
Tru1I	TTAA	4 cut(s)	228, 1086, 1301, 1461
Tru9I	TTAA	4 cut(s)	228, 1086, 1301, 1461
TscAI	CASTG	2 cut(s)	399, 564
TspDTI	ATGAA	8 cut(s)	339, 697, 761, 956, 1187, 1283, 1498, 1550
TspGWI	ACGGA	3 cut(s)	49, 121, 716
TspRI	CASTG	2 cut(s)	399, 564
VneI	GTGCAC	1 cut(s)	822
XagI	CCTNNNNNAGG	1 cut(s)	1300
XapI	RAATTY	4 cut(s)	445, 1270, 1278, 1505
XceI	RCATGY	5 cut(s)	121, 218, 280, 838, 987
XmaJI	CCTAGG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	1524
XspI	CTAG	3 cut(s)	678, 743, 1001
ZrmI	AGTACT	1 cut(s)	268
Zsp2I	ATGCAT	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.