AT4G15415

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006454
Physical Location & Seq
Forward (+)
8816922 .. 8819783
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15415.3

Sequence Viewer

Length: 1569 bp
ATGATCAAACAGATATTTGGGAAATTGCCCAGAAAACCTTCAAAATCTTCGCATAATGACTCGAATCCAAACGGAGAAGGTGGGGTTAATTCATATTACATTCCCAATTCGGGTATTAGTAGTATCTCGAAGCCTTCTTCGAAATCATCCGCATCGAATTCGAATGGAGCAAATGGAACTGTTATTGCTCCTTCTTCAACGAGCTCTAACAGAACCAATCAAGTCAATGGAGTTTATGAAGCATTGCCAAGCTTTAGAGATGTTCCTACCTCGGAGAAACCTAATCTGTTTATCAAGAAGTTGAGTATGTGTTGCGTTGTGTTCGACTTCAATGATCCGTCGAAGAATCTGAGAGAGAAAGAGATAAAGAGACAGACTTTGCTTGAGCTTGTTGATTATATTGCAACGGTTTCTACAAAGTTGAGTGATGCTGCAATGCAAGAGATTGCGAAAGTGGCTGTTGTTAATCTTTTCAGGACGTTTCCTTCTGCGAATCACGAGAGTAAGATTCTCGAAACGCTTGATGTGGATGATGAGGAACCTGCTTTAGAGCCGGCTTGGCCTCATCTTCAAGTTGTCTATGAGCTTCTTCTTAGATTTGTGGCCTCGCCTATGACTGATGCAAAGCTTGCAAAGAGATATATTGACCATTCATTTGTCTTGAAGCTCTTGGATTTGTTTGACTCTGAAGACCAGAGAGAGAGGGAATATCTAAAGACCATTCTTCATCGGATATACGGGAAATTCATGGTGCACCGACCCTTTATCAGAAAGGCGATCAACAATATCTTCTACAGATTCATTTTTGAAACCGAAAAGCATAACGGTATTGCAGAGTTGCTTGAGATACTAGGAAGTATAATCAACGGTTTCGCTTTACCGTTAAAAGAAGAGCATAAGCTCTTCCTAATCCGGGCATTGATTCCACTCCACAGACCTAAATGTGCATCTGCTTATCATCAACAGCTTTCTTATTGCATTGTTCAGTTTGTAGAGAAAGACTTCAAGCTTGCTGATACGGTCATTAGAGGACTTCTAAAGTATTGGCCTGTGACTAATAGTTCAAAGGAAGTTATGTTTCTTGGAGAGTTGGAAGAAGTTTTGGAAGCAACTCAAGCAGCTGAGTTTCAGCGATGTATGGTTCCTTTATTTCGTCAAATCGCTAGATGCCTCAACAGTTCACATTTTCAGGTGGCTGAAAGGGCTCTATTTCTATGGAACAACGATCACATAAGAAACCTGATTACTCAAAACCATAAAGTGATAATGCCCATTGTGTTCCCGGCTATGGAGAGAAACACACGGGGGCATTGGAACCAAGCAGTTCAGAGTCTGACTTTGAATGTGAGAAAGGTAATGGCAGAGACAGACCAAATTCTGTTTGATGAATGCTTAGCCAAGTTCCAAGAAGATGAAGCGAATGAAACCGAGGTTGTAGCCAAACGAGAAGCAACATGGAAGCTTTTGGAAGAGTTAGCAGCTTCGAAATCCGTAAGCAACGAGGCAGTGCTCGTCCCCCGATTTTCATCTTCAGTTACTCTTGCAACCGGTAAAACTTCGGGTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0000902 GO:0000904 GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006520 GO:0006534 GO:0006555 GO:0006575 GO:0006725 GO:0006732 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009058 GO:0009066 GO:0009069 GO:0009116 GO:0009119 GO:0009653 GO:0009759 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010026 GO:0010090 GO:0010646 GO:0010648 GO:0016043 GO:0016143 GO:0016144 GO:0017144 GO:0018130 GO:0019222 GO:0019438 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0023051 GO:0023057 GO:0030154 GO:0031323 GO:0031347 GO:0031348 GO:0032502 GO:0032989 GO:0033353 GO:0034641 GO:0042278 GO:0042343 GO:0042430 GO:0042435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045088 GO:0045824 GO:0046128 GO:0046439 GO:0046483 GO:0046498 GO:0046500 GO:0048468 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048856 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051186 GO:0055086 GO:0065007 GO:0071704 GO:0071840 GO:0072521 GO:0080134 GO:0080183 GO:0090342 GO:0090558 GO:0090626 GO:0097159 GO:1900457 GO:1900458 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901657 GO:1901659 GO:2000377
KEGG Pathways
Metabolic & Signaling
ko03015 ko04071 ko04113 ko04114 ko04151 ko04152 ko04261 ko04728 ko05165 map03015 map04071 map04113 map04114 map04151 map04152 map04261 map04728 map05165
Pfam Domains
Protein Families
B56

Protein Analysis

522

Amino Acids

59.16

Weight (kDa)

8.04

Isoelectric Point (pI)

34.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 82 - 398 2.2e-149 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 550
AciI CCGC 1 cut(s) 150
AclWI GGATC 1 cut(s) 329
AcsI RAATTY 3 cut(s) 157, 743, 1374
AcuI CTGAAG 2 cut(s) 708, 1515
AfiI CCNNNNNNNGG 3 cut(s) 110, 913, 1288
AgeI ACCGGT 1 cut(s) 1547
AgsI TTSAA 9 cut(s) 42, 198, 331, 572, 664, 809, 1006, 1065, 1342
Alw21I GWGCWC 3 cut(s) 206, 756, 1512
Alw26I GTCTC 2 cut(s) 364, 1358
Alw44I GTGCAC 1 cut(s) 752
AlwI GGATC 1 cut(s) 329
AlwNI CAGNNNCTG 1 cut(s) 1333
AoxI GGCC 3 cut(s) 560, 603, 1046
ApaLI GTGCAC 1 cut(s) 752
ApeKI GCWGC 3 cut(s) 431, 1118, 1478
ApoI RAATTY 3 cut(s) 157, 743, 1374
ArsI GACNNNNNNTTYG 2 cut(s) 638, 670
AsiGI ACCGGT 1 cut(s) 1547
Asp700I GAANNNNTTC 2 cut(s) 37, 1001
AsuC2I CCSGG 2 cut(s) 914, 1283
AsuII TTCGAA 3 cut(s) 140, 161, 1484
BaeGI GKGCMC 1 cut(s) 756
BanII GRGCYC 2 cut(s) 206, 1207
BauI CACGAG 1 cut(s) 497
BbsI GAAGAC 1 cut(s) 696
Bbv12I GWGCWC 3 cut(s) 206, 756, 1512
BbvI GCAGC 3 cut(s) 418, 1130, 1490
BcgI CGANNNNNNTGC 2 cut(s) 141, 175
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 2 cut(s) 914, 1283
BcoDI GTCTC 2 cut(s) 364, 1358
BfaI CTAG 2 cut(s) 851, 1164
BfmI CTRYAG 1 cut(s) 793
BfuAI ACCTGC 1 cut(s) 550
BglI GCCNNNNNGGC 1 cut(s) 559
BisI GCNGC 3 cut(s) 432, 1119, 1479
BlpI GCTNAGC 1 cut(s) 1393
BlsI GCNGC 3 cut(s) 433, 1120, 1480
Bme1390I CCNGG 2 cut(s) 914, 1283
BmiI GGNNCC 3 cut(s) 540, 1143, 1316
BmrFI CCNGG 2 cut(s) 914, 1283
BmsI GCATC 5 cut(s) 161, 418, 610, 956, 1157
BpiI GAAGAC 1 cut(s) 696
Bpu1102I GCTNAGC 1 cut(s) 1393
Bpu14I TTCGAA 3 cut(s) 140, 161, 1484
BpuEI CTTGAG 3 cut(s) 404, 863, 1098
BpuMI CCSGG 2 cut(s) 914, 1283
BsaBI GATNNNNATC 1 cut(s) 1525
BsaJI CCNNGG 2 cut(s) 270, 1428
BsaWI WCCGGW 1 cut(s) 1547
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 913, 1288
Bse118I RCCGGY 2 cut(s) 553, 1547
Bse3DI GCAATG 2 cut(s) 242, 441
Bse8I GATNNNNATC 1 cut(s) 1525
BseDI CCNNGG 2 cut(s) 270, 1428
BseGI GGATG 2 cut(s) 146, 535
BseJI GATNNNNATC 1 cut(s) 1525
BseLI CCNNNNNNNGG 3 cut(s) 110, 913, 1288
BseMI GCAATG 2 cut(s) 242, 441
BseMII CTCAG 2 cut(s) 341, 1113
BseSI GKGCMC 1 cut(s) 756
BseXI GCAGC 3 cut(s) 418, 1130, 1490
BshFI GGCC 3 cut(s) 562, 605, 1048
BshTI ACCGGT 1 cut(s) 1547
BsiHKAI GWGCWC 3 cut(s) 206, 756, 1512
BsiSI CCGG 4 cut(s) 554, 913, 1283, 1548
BslFI GGGAC 1 cut(s) 1499
BslI CCNNNNNNNGG 3 cut(s) 110, 913, 1288
BsmAI GTCTC 2 cut(s) 364, 1358
BsmFI GGGAC 1 cut(s) 1499
BsmI GAATGC 1 cut(s) 1394
BsnI GGCC 3 cut(s) 562, 605, 1048
Bsp119I TTCGAA 3 cut(s) 140, 161, 1484
Bsp1286I GDGCHC 4 cut(s) 206, 756, 1207, 1512
Bsp143I GATC 4 cut(s) 3, 334, 777, 1225
Bsp1720I GCTNAGC 1 cut(s) 1393
BspACI CCGC 1 cut(s) 150
BspANI GGCC 3 cut(s) 562, 605, 1048
BspCNI CTCAG 2 cut(s) 342, 1114
BspLI GGNNCC 3 cut(s) 540, 1143, 1316
BspMI ACCTGC 1 cut(s) 550
BspPI GGATC 1 cut(s) 329
BspQI GCTCTTC 2 cut(s) 885, 908
BspT104I TTCGAA 3 cut(s) 140, 161, 1484
BsrDI GCAATG 2 cut(s) 242, 441
BsrFI RCCGGY 2 cut(s) 553, 1547
BssAI RCCGGY 2 cut(s) 553, 1547
BssECI CCNNGG 2 cut(s) 270, 1428
BssMI GATC 4 cut(s) 3, 334, 777, 1225
BssSI CACGAG 1 cut(s) 497
Bst2BI CACGAG 1 cut(s) 497
Bst4CI ACNGT 7 cut(s) 181, 409, 827, 869, 882, 1021, 1178
Bst6I CTCTTC 3 cut(s) 885, 908, 1464
BstAPI GCANNNNNTGC 1 cut(s) 629
BstBI TTCGAA 3 cut(s) 140, 161, 1484
BstC8I GCNNGC 3 cut(s) 555, 630, 1011
BstDEI CTNAG 4 cut(s) 350, 593, 1122, 1393
BstF5I GGATG 2 cut(s) 146, 535
BstKTI GATC 4 cut(s) 6, 337, 780, 1228
BstMAI GTCTC 2 cut(s) 364, 1358
BstMBI GATC 4 cut(s) 3, 334, 777, 1225
BstMWI GCNNNNNNNGC 5 cut(s) 455, 559, 629, 1115, 1202
BstSCI CCNGG 2 cut(s) 912, 1281
BstSFI CTRYAG 1 cut(s) 793
BstSLI GKGCMC 1 cut(s) 756
BstV1I GCAGC 3 cut(s) 418, 1130, 1490
BstV2I GAAGAC 1 cut(s) 696
BsuRI GGCC 3 cut(s) 562, 605, 1048
BtgZI GCGATG 1 cut(s) 1147
BtsCI GGATG 2 cut(s) 146, 535
BtsI GCAGTG 1 cut(s) 1512
BtsIMutI CAGTG 1 cut(s) 1512
BveI ACCTGC 1 cut(s) 550
Cac8I GCNNGC 3 cut(s) 555, 630, 1011
CaiI CAGNNNCTG 1 cut(s) 1333
Cfr10I RCCGGY 2 cut(s) 553, 1547
CspAI ACCGGT 1 cut(s) 1547
CviAII CATG 2 cut(s) 748, 1455
DdeI CTNAG 4 cut(s) 350, 593, 1122, 1393
DpnI GATC 4 cut(s) 5, 336, 779, 1227
DpnII GATC 4 cut(s) 3, 334, 777, 1225
Eam1104I CTCTTC 3 cut(s) 885, 908, 1464
EarI CTCTTC 3 cut(s) 885, 908, 1464
Ecl136II GAGCTC 1 cut(s) 204
Eco24I GRGCYC 2 cut(s) 206, 1207
Eco53kI GAGCTC 1 cut(s) 204
Eco57I CTGAAG 2 cut(s) 708, 1515
EcoICRI GAGCTC 1 cut(s) 204
EcoRI GAATTC 1 cut(s) 157
EcoT38I GRGCYC 2 cut(s) 206, 1207
FaeI CATG 2 cut(s) 751, 1458
FaqI GGGAC 1 cut(s) 1499
FatI CATG 2 cut(s) 747, 1454
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 3 cut(s) 432, 1119, 1479
FokI GGATG 2 cut(s) 133, 542
FriOI GRGCYC 2 cut(s) 206, 1207
Fsp4HI GCNGC 3 cut(s) 432, 1119, 1479
FspBI CTAG 2 cut(s) 851, 1164
GluI GCNGC 3 cut(s) 432, 1119, 1479
HaeIII GGCC 3 cut(s) 562, 605, 1048
HapII CCGG 4 cut(s) 554, 913, 1283, 1548
Hin1II CATG 2 cut(s) 751, 1458
HindIII AAGCTT 4 cut(s) 250, 626, 1007, 1460
HinfI GANTC 9 cut(s) 59, 64, 346, 493, 508, 683, 798, 922, 1330
HpaII CCGG 4 cut(s) 554, 913, 1283, 1548
Hpy166II GTNNAC 2 cut(s) 754, 1181
Hpy188I TCNGA 7 cut(s) 274, 351, 688, 732, 770, 1329, 1335
Hpy188III TCNNGA 6 cut(s) 127, 295, 475, 497, 512, 661
Hpy8I GTNNAC 2 cut(s) 754, 1181
Hpy99I CGWCG 1 cut(s) 343
HpyAV CCTTC 5 cut(s) 48, 71, 144, 201, 495
HpyCH4III ACNGT 7 cut(s) 181, 409, 827, 869, 882, 1021, 1178
HpyCH4IV ACGT 1 cut(s) 479
HpyF10VI GCNNNNNNNGC 5 cut(s) 455, 559, 629, 1115, 1202
HpyF3I CTNAG 4 cut(s) 350, 593, 1122, 1393
HpySE526I ACGT 1 cut(s) 479
Hsp92II CATG 2 cut(s) 751, 1458
KroI GCCGGC 1 cut(s) 553
KroNI GCCGGC 1 cut(s) 555
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 334, 777, 1225
LguI GCTCTTC 2 cut(s) 885, 908
LmnI GCTCC 2 cut(s) 167, 193
Lsp1109I GCAGC 3 cut(s) 418, 1130, 1490
LweI GCATC 5 cut(s) 161, 418, 610, 956, 1157
MaeI CTAG 2 cut(s) 851, 1164
MaeII ACGT 1 cut(s) 479
MaeIII GTNAC 2 cut(s) 1051, 1534
MalI GATC 4 cut(s) 5, 336, 779, 1227
MboI GATC 4 cut(s) 3, 334, 777, 1225
MhlI GDGCHC 4 cut(s) 206, 756, 1207, 1512
MluCI AATT 6 cut(s) 23, 88, 106, 157, 743, 1374
MlyI GAGTC 3 cut(s) 53, 677, 1339
MmeI TCCRAC 1 cut(s) 1071
MnlI CCTC 9 cut(s) 280, 529, 573, 616, 696, 1022, 1181, 1423, 1495
MroNI GCCGGC 1 cut(s) 553
MroXI GAANNNNTTC 2 cut(s) 37, 1001
MseI TTAA 3 cut(s) 87, 465, 884
MspA1I CMGCKG 1 cut(s) 1121
MspI CCGG 4 cut(s) 554, 913, 1283, 1548
MspR9I CCNGG 2 cut(s) 914, 1283
Mva1269I GAATGC 1 cut(s) 1394
MwoI GCNNNNNNNGC 5 cut(s) 455, 559, 629, 1115, 1202
NaeI GCCGGC 1 cut(s) 555
NciI CCSGG 2 cut(s) 914, 1283
NdeII GATC 4 cut(s) 3, 334, 777, 1225
NgoMIV GCCGGC 1 cut(s) 553
NlaIII CATG 2 cut(s) 751, 1458
NlaIV GGNNCC 3 cut(s) 540, 1143, 1316
NmuCI GTSAC 1 cut(s) 1051
NspV TTCGAA 3 cut(s) 140, 161, 1484
PciSI GCTCTTC 2 cut(s) 885, 908
PctI GAATGC 1 cut(s) 1394
PdiI GCCGGC 1 cut(s) 555
PdmI GAANNNNTTC 2 cut(s) 37, 1001
PfeI GAWTC 6 cut(s) 64, 346, 493, 508, 798, 922
PinAI ACCGGT 1 cut(s) 1547
PkrI GCNGC 3 cut(s) 433, 1120, 1480
PleI GAGTC 3 cut(s) 53, 677, 1338
PpsI GAGTC 3 cut(s) 53, 677, 1338
Psp124BI GAGCTC 1 cut(s) 206
PspN4I GGNNCC 3 cut(s) 540, 1143, 1316
PstNI CAGNNNCTG 1 cut(s) 1333
PvuII CAGCTG 1 cut(s) 1121
SacI GAGCTC 1 cut(s) 206
SapI GCTCTTC 2 cut(s) 885, 908
SaqAI TTAA 3 cut(s) 87, 465, 884
SatI GCNGC 3 cut(s) 432, 1119, 1479
Sau3AI GATC 4 cut(s) 3, 334, 777, 1225
SchI GAGTC 3 cut(s) 53, 677, 1339
ScrFI CCNGG 2 cut(s) 914, 1283
SduI GDGCHC 4 cut(s) 206, 756, 1207, 1512
SfaNI GCATC 5 cut(s) 161, 418, 610, 956, 1157
SfcI CTRYAG 1 cut(s) 793
SfuI TTCGAA 3 cut(s) 140, 161, 1484
SmlI CTYRAG 3 cut(s) 383, 842, 1113
SmoI CTYRAG 3 cut(s) 383, 842, 1113
Sse9I AATT 6 cut(s) 23, 88, 106, 157, 743, 1374
SsiI CCGC 1 cut(s) 150
SspMI CTAG 2 cut(s) 851, 1164
SstI GAGCTC 1 cut(s) 206
StyD4I CCNGG 2 cut(s) 912, 1281
TaaI ACNGT 7 cut(s) 181, 409, 827, 869, 882, 1021, 1178
TaiI ACGT 1 cut(s) 482
TaqI TCGA 9 cut(s) 62, 128, 140, 155, 161, 324, 341, 513, 1484
TasI AATT 6 cut(s) 23, 88, 106, 157, 743, 1374
TfiI GAWTC 6 cut(s) 64, 346, 493, 508, 798, 922
Tru1I TTAA 3 cut(s) 87, 465, 884
Tru9I TTAA 3 cut(s) 87, 465, 884
TscAI CASTG 1 cut(s) 1512
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 3 cut(s) 431, 1118, 1478
Tsp45I GTSAC 1 cut(s) 1051
TspGWI ACGGA 3 cut(s) 87, 327, 1480
TspRI CASTG 1 cut(s) 1512
VneI GTGCAC 1 cut(s) 752
XapI RAATTY 3 cut(s) 157, 743, 1374
XmnI GAANNNNTTC 2 cut(s) 37, 1001
XspI CTAG 2 cut(s) 851, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.