Rw2G044300

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
70964198 .. 70967043
2846 bp
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UTR
Exon/CDS
Intron
Rw2G044300.1

Sequence Viewer

Length: 1521 bp
ATGATCAAACAAATTCTGGGTAGAATACCTCGAAAACCTCGAAATCATCGCAAAACGATGCATATAACGATGGAGGGGTTAATGGGATTGGACCCAATTCCATTAACAGCTCAAAGTCTACTTCTGCTGCTGCATCAAAGTCTTCGAATTCGGGTTCCGGGGCTTCAAGAACCAGCAATGGGATTCTTGCCCCACAGTCAAGGATGTCCCAGTGCAGAGAAGCAGGGTCTTTTCATCAAGAAATTGAATATGTGTTGTGTTGTATTTGATTTCAATGATCCGTCGAAGAATGTCAGGGAGAAGGACATAAAGCGGCAGACTTTGCTTGAACTTGTGGATTACATTTCATCTGTGAGTTCGAAATTCAATGAGGTGACAATGCAGGGGATTACCAAGATGGTGTCTACCAATTTGTTTCGGACTTTTCCATCTTCGAATCATGAGAAGAAGGCTCTTGAGAGTTATGACCAAGATGAGGAGGACCAGATGTTGGAGCCTGCTTGGTCTCATCTTCAGGTTGTGTATGAGTTTCTGTTGAGATTTGTGGCTTCCCCGGAGACAGATGCTAAGCTAGCTAAAAGATATATTGACCAAGCGTTTGTTTTGAAATTGCTTGATTTGTTTGACTCTGAGGATCAAAGAGAGAGGGAATACTTAAAAACGATTCTCCACCGGGTCTATGGGAAGTTCATGGTACATCGACCGTTCATTAGGAAAGCCATCAACAATATCTTCTTTTGGTTCATATTTGAGACTCAGAAGCACAATGGGATTGCAGAAATGCTTGAAATTCTAGGCAGTATAATCAATGGTTTTGCTTTGCCTTTGAAGGAAGAGCACAAGCTGTTCCTTGTCCGCGCCTTGATTCCCCTTCACAAGCCTAAATGTGTATCTATGTACCATCAGCCACTTTCCTATTGCATTACTCAGTTCGTGGAGAAAGATGCCAAGCTATCTGATACCGTGATTAGAGGACTGTTGAAGTATTGGCCCATAACCAATAGTTCAAAGGAAGTTATGTTCCTTGGTGAATTGGAAGAAGTTCTGGAAGCTACCCAGCCATCAGAATTTCAGCGGTGCATGGTCCCTCTTTTCCGTCAAATTGGTCAGTGCCTCAGCAGCTCACATTTTCAGGTAGCTGAACGTGCATTGTTTTTGTGGAATAATGATCACATAAGAACTTTGATCACACAGAACCGCCAAGTGATTCTGCCAATAATCTTCCCTGCTATGGAGGAAAACACTCGGAGTCACTGGAATCAAGCTGTTCGGAGTTTGACATTGAATGTGAGAAAGATATTCTCAGATGTTGATCAAGAACTCTTTGATGAGTGCTTGGCTACATTCCAAGAAGACGAAACTAAAGAGAAGGAAACACAGGAGAAACGTGAATCAACCTGGAAGCGCTTGGAAGATGTGGCTGCCTCCAAGGCTTTGAACACTGAAGTCGGGCTTGTCTCAAGGTTTGACTCCACTGCCATTTCTACTAGCCAAAAACCCCGAGCCACTTCTGGTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

58.61

Weight (kDa)

8.03

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 65 - 473 9.1e-187 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 490
AccI GTMKAC 2 cut(s) 118, 404
AccII CGCG 1 cut(s) 858
AciI CCGC 4 cut(s) 313, 856, 1075, 1198
AclWI GGATC 2 cut(s) 272, 642
AcsI RAATTY 5 cut(s) 12, 147, 362, 789, 1067
AcuI CTGAAG 2 cut(s) 497, 1464
AfaI GTAC 2 cut(s) 696, 899
AfeI AGCGCT 1 cut(s) 1406
AfiI CCNNNNNNNGG 4 cut(s) 179, 475, 490, 1231
AjnI CCWGG 1 cut(s) 1397
AloI GAACNNNNNNTCC 2 cut(s) 1004, 1036
AluBI AGCT 9 cut(s) 110, 571, 575, 844, 952, 1052, 1122, 1139, 1265
AluI AGCT 9 cut(s) 110, 571, 575, 844, 952, 1052, 1122, 1139, 1265
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 4 cut(s) 510, 551, 746, 1462
AlwI GGATC 2 cut(s) 272, 642
Ama87I CYCGRG 1 cut(s) 1500
Aor51HI AGCGCT 1 cut(s) 1406
AoxI GGCC 1 cut(s) 989
ApeKI GCWGC 4 cut(s) 127, 130, 1119, 1421
ApoI RAATTY 5 cut(s) 12, 147, 362, 789, 1067
ArsI GACNNNNNNTTYG 2 cut(s) 581, 613
Asp700I GAANNNNTTC 1 cut(s) 1041
AspLEI GCGC 2 cut(s) 860, 1407
AspS9I GGNCC 4 cut(s) 91, 481, 990, 1084
AsuC2I CCSGG 3 cut(s) 159, 554, 674
AsuHPI GGTGA 2 cut(s) 385, 1040
AsuII TTCGAA 3 cut(s) 145, 359, 434
AsuNHI GCTAGC 1 cut(s) 571
AvaI CYCGRG 1 cut(s) 1500
AvaII GGWCC 3 cut(s) 91, 481, 1084
BbsI GAAGAC 2 cut(s) 134, 1359
Bbv12I GWGCWC 1 cut(s) 840
BbvCI CCTCAGC 1 cut(s) 1115
BbvI GCAGC 4 cut(s) 114, 117, 1131, 1408
BccI CCATC 6 cut(s) 64, 391, 436, 728, 909, 1069
BciT130I CCWGG 1 cut(s) 1399
BclI TGATCA 4 cut(s) 3, 1168, 1185, 1312
BcnI CCSGG 3 cut(s) 159, 554, 674
BcoDI GTCTC 4 cut(s) 510, 551, 746, 1462
BfaI CTAG 3 cut(s) 572, 794, 1488
BfoI RGCGCY 1 cut(s) 1408
BglI GCCNNNNNGGC 1 cut(s) 1430
BisI GCNGC 5 cut(s) 128, 131, 314, 1120, 1422
BlpI GCTNAGC 1 cut(s) 567
BlsI GCNGC 5 cut(s) 129, 132, 315, 1121, 1423
Bme1390I CCNGG 4 cut(s) 159, 554, 674, 1399
Bme18I GGWCC 3 cut(s) 91, 481, 1084
BmeT110I CYCGRG 1 cut(s) 1500
BmgT120I GGNCC 4 cut(s) 91, 481, 990, 1084
BmiI GGNNCC 4 cut(s) 93, 156, 495, 1086
BmrFI CCNGG 4 cut(s) 159, 554, 674, 1399
BmrI ACTGGG 1 cut(s) 204
BmsI GCATC 4 cut(s) 48, 142, 553, 934
BmtI GCTAGC 1 cut(s) 575
BmuI ACTGGG 1 cut(s) 204
BpiI GAAGAC 2 cut(s) 134, 1359
Bpu10I CCTNAGC 1 cut(s) 1115
Bpu1102I GCTNAGC 1 cut(s) 567
Bpu14I TTCGAA 3 cut(s) 145, 359, 434
BpuEI CTTGAG 2 cut(s) 476, 1444
BpuMI CCSGG 3 cut(s) 159, 554, 674
BsaBI GATNNNNATC 1 cut(s) 1311
BsaI GGTCTC 1 cut(s) 510
BsaJI CCNNGG 4 cut(s) 158, 552, 1024, 1428
Bsc4I CCNNNNNNNGG 4 cut(s) 179, 475, 490, 1231
Bse1I ACTGG 2 cut(s) 210, 1259
Bse3DI GCAATG 1 cut(s) 183
Bse8I GATNNNNATC 1 cut(s) 1311
BseBI CCWGG 1 cut(s) 1399
BseDI CCNNGG 4 cut(s) 158, 552, 1024, 1428
BseGI GGATG 1 cut(s) 209
BseJI GATNNNNATC 1 cut(s) 1311
BseLI CCNNNNNNNGG 4 cut(s) 179, 475, 490, 1231
BseMI GCAATG 1 cut(s) 183
BseMII CTCAG 5 cut(s) 621, 770, 941, 1129, 1317
BseNI ACTGG 2 cut(s) 210, 1259
BseRI GAGGAG 1 cut(s) 491
BseXI GCAGC 4 cut(s) 114, 117, 1131, 1408
BseYI CCCAGC 1 cut(s) 1056
BsgI GTGCAG 1 cut(s) 234
Bsh1236I CGCG 1 cut(s) 858
Bsh1285I CGRYCG 1 cut(s) 704
BshFI GGCC 1 cut(s) 991
BsiEI CGRYCG 1 cut(s) 704
BsiHKAI GWGCWC 1 cut(s) 840
BsiHKCI CYCGRG 1 cut(s) 1500
BsiSI CCGG 3 cut(s) 158, 554, 673
BslFI GGGAC 2 cut(s) 192, 1070
BslI CCNNNNNNNGG 4 cut(s) 179, 475, 490, 1231
BsmAI GTCTC 4 cut(s) 510, 551, 746, 1462
BsmFI GGGAC 2 cut(s) 192, 1070
BsnI GGCC 1 cut(s) 991
Bso31I GGTCTC 1 cut(s) 510
BsoBI CYCGRG 1 cut(s) 1500
Bsp119I TTCGAA 3 cut(s) 145, 359, 434
Bsp1286I GDGCHC 1 cut(s) 840
Bsp143I GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
Bsp1720I GCTNAGC 1 cut(s) 567
BspACI CCGC 4 cut(s) 313, 856, 1075, 1198
BspANI GGCC 1 cut(s) 991
BspCNI CTCAG 5 cut(s) 622, 769, 940, 1128, 1316
BspFNI CGCG 1 cut(s) 858
BspHI TCATGA 1 cut(s) 439
BspLI GGNNCC 4 cut(s) 93, 156, 495, 1086
BspOI GCTAGC 1 cut(s) 575
BspPI GGATC 2 cut(s) 272, 642
BspQI GCTCTTC 1 cut(s) 828
BspT104I TTCGAA 3 cut(s) 145, 359, 434
BspTNI GGTCTC 1 cut(s) 510
BsrDI GCAATG 1 cut(s) 183
BsrI ACTGG 2 cut(s) 210, 1259
BssECI CCNNGG 4 cut(s) 158, 552, 1024, 1428
BssMI GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
BssT1I CCWWGG 2 cut(s) 1024, 1428
Bst2UI CCWGG 1 cut(s) 1399
Bst4CI ACNGT 4 cut(s) 197, 705, 964, 978
Bst6I CTCTTC 1 cut(s) 828
BstAPI GCANNNNNTGC 1 cut(s) 322
BstBI TTCGAA 3 cut(s) 145, 359, 434
BstC8I GCNNGC 2 cut(s) 498, 573
BstDEI CTNAG 6 cut(s) 567, 630, 756, 927, 1115, 1303
BstF5I GGATG 1 cut(s) 209
BstFNI CGCG 1 cut(s) 858
BstH2I RGCGCY 1 cut(s) 1408
BstHHI GCGC 2 cut(s) 860, 1407
BstKTI GATC 6 cut(s) 6, 280, 637, 1171, 1188, 1315
BstMAI GTCTC 4 cut(s) 510, 551, 746, 1462
BstMBI GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
BstMCI CGRYCG 1 cut(s) 704
BstMWI GCNNNNNNNGC 5 cut(s) 322, 572, 1119, 1145, 1430
BstNI CCWGG 1 cut(s) 1399
BstSCI CCNGG 4 cut(s) 157, 552, 672, 1397
BstUI CGCG 1 cut(s) 858
BstV1I GCAGC 4 cut(s) 114, 117, 1131, 1408
BstV2I GAAGAC 2 cut(s) 134, 1359
BsuRI GGCC 1 cut(s) 991
BtgZI GCGATG 1 cut(s) 32
BtsCI GGATG 1 cut(s) 209
BtsI GCAGTG 1 cut(s) 1473
BtsIMutI CAGTG 5 cut(s) 217, 1115, 1252, 1440, 1473
Cac8I GCNNGC 2 cut(s) 498, 573
CciI TCATGA 1 cut(s) 439
CfoI GCGC 2 cut(s) 860, 1407
Cfr13I GGNCC 4 cut(s) 91, 481, 990, 1084
Csp6I GTAC 2 cut(s) 695, 898
CviAII CATG 3 cut(s) 440, 691, 1081
CviQI GTAC 2 cut(s) 695, 898
DdeI CTNAG 6 cut(s) 567, 630, 756, 927, 1115, 1303
DpnI GATC 6 cut(s) 5, 279, 636, 1170, 1187, 1314
DpnII GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
Eam1104I CTCTTC 1 cut(s) 828
EarI CTCTTC 1 cut(s) 828
Eco130I CCWWGG 2 cut(s) 1024, 1428
Eco31I GGTCTC 1 cut(s) 510
Eco47I GGWCC 3 cut(s) 91, 481, 1084
Eco47III AGCGCT 1 cut(s) 1406
Eco57I CTGAAG 2 cut(s) 497, 1464
Eco88I CYCGRG 1 cut(s) 1500
EcoRI GAATTC 1 cut(s) 147
EcoRII CCWGG 1 cut(s) 1397
EcoT14I CCWWGG 2 cut(s) 1024, 1428
EcoT22I ATGCAT 1 cut(s) 63
ErhI CCWWGG 2 cut(s) 1024, 1428
FaeI CATG 3 cut(s) 443, 694, 1084
FalI AAGNNNNNCTT 2 cut(s) 1437, 1469
FaqI GGGAC 2 cut(s) 192, 1070
FatI CATG 3 cut(s) 439, 690, 1080
FbaI TGATCA 4 cut(s) 3, 1168, 1185, 1312
FblI GTMKAC 2 cut(s) 118, 404
Fnu4HI GCNGC 5 cut(s) 128, 131, 314, 1120, 1422
FokI GGATG 1 cut(s) 216
Fsp4HI GCNGC 5 cut(s) 128, 131, 314, 1120, 1422
FspBI CTAG 3 cut(s) 572, 794, 1488
GlaI GCGC 2 cut(s) 859, 1406
GluI GCNGC 5 cut(s) 128, 131, 314, 1120, 1422
GsaI CCCAGC 1 cut(s) 1060
HaeII RGCGCY 1 cut(s) 1408
HaeIII GGCC 1 cut(s) 991
HapII CCGG 3 cut(s) 158, 554, 673
HhaI GCGC 2 cut(s) 860, 1407
Hin1II CATG 3 cut(s) 443, 694, 1084
Hin6I GCGC 2 cut(s) 858, 1405
HinP1I GCGC 2 cut(s) 858, 1405
HpaII CCGG 3 cut(s) 158, 554, 673
HphI GGTGA 2 cut(s) 385, 1040
Hpy166II GTNNAC 2 cut(s) 119, 405
Hpy188I TCNGA 8 cut(s) 420, 631, 759, 958, 1066, 1248, 1272, 1306
Hpy188III TCNNGA 6 cut(s) 167, 238, 440, 455, 1046, 1316
Hpy8I GTNNAC 2 cut(s) 119, 405
Hpy99I CGWCG 1 cut(s) 286
HpyAV CCTTC 5 cut(s) 295, 442, 823, 881, 1363
HpyCH4III ACNGT 4 cut(s) 197, 705, 964, 978
HpyCH4IV ACGT 2 cut(s) 1144, 1387
HpyCH4V TGCA 8 cut(s) 61, 133, 215, 382, 776, 921, 1080, 1148
HpyF10VI GCNNNNNNNGC 5 cut(s) 322, 572, 1119, 1145, 1430
HpyF3I CTNAG 6 cut(s) 567, 630, 756, 927, 1115, 1303
HpySE526I ACGT 2 cut(s) 1144, 1387
Hsp92II CATG 3 cut(s) 443, 694, 1084
HspAI GCGC 2 cut(s) 858, 1405
Ksp22I TGATCA 4 cut(s) 3, 1168, 1185, 1312
Kzo9I GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 1 cut(s) 493
Lsp1109I GCAGC 4 cut(s) 114, 117, 1131, 1408
LweI GCATC 4 cut(s) 48, 142, 553, 934
MaeI CTAG 3 cut(s) 572, 794, 1488
MaeII ACGT 2 cut(s) 1144, 1387
MaeIII GTNAC 2 cut(s) 373, 1250
MalI GATC 6 cut(s) 5, 279, 636, 1170, 1187, 1314
MboI GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
MhlI GDGCHC 1 cut(s) 840
MlyI GAGTC 4 cut(s) 620, 748, 1258, 1463
MmeI TCCRAC 1 cut(s) 471
Mph1103I ATGCAT 1 cut(s) 63
MroXI GAANNNNTTC 1 cut(s) 1041
MseI TTAA 4 cut(s) 80, 104, 656, 1519
MspA1I CMGCKG 1 cut(s) 1075
MspI CCGG 3 cut(s) 158, 554, 673
MspR9I CCNGG 4 cut(s) 159, 554, 674, 1399
MvaI CCWGG 1 cut(s) 1399
MvnI CGCG 1 cut(s) 858
MwoI GCNNNNNNNGC 5 cut(s) 322, 572, 1119, 1145, 1430
NciI CCSGG 3 cut(s) 159, 554, 674
NdeII GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
NheI GCTAGC 1 cut(s) 571
NlaIII CATG 3 cut(s) 443, 694, 1084
NlaIV GGNNCC 4 cut(s) 93, 156, 495, 1086
NmuCI GTSAC 2 cut(s) 373, 1250
NsiI ATGCAT 1 cut(s) 63
NspV TTCGAA 3 cut(s) 145, 359, 434
PagI TCATGA 1 cut(s) 439
PciSI GCTCTTC 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 1041
PfeI GAWTC 7 cut(s) 183, 436, 664, 865, 1207, 1258, 1391
PflMI CCANNNNNTGG 1 cut(s) 490
PkrI GCNGC 5 cut(s) 129, 132, 315, 1121, 1423
PleI GAGTC 4 cut(s) 620, 748, 1257, 1463
PpsI GAGTC 4 cut(s) 620, 748, 1257, 1463
Psp6I CCWGG 1 cut(s) 1397
PspFI CCCAGC 1 cut(s) 1056
PspGI CCWGG 1 cut(s) 1397
PspN4I GGNNCC 4 cut(s) 93, 156, 495, 1086
PspPI GGNCC 4 cut(s) 91, 481, 990, 1084
RsaI GTAC 2 cut(s) 696, 899
RsaNI GTAC 2 cut(s) 695, 898
SapI GCTCTTC 1 cut(s) 828
SaqAI TTAA 4 cut(s) 80, 104, 656, 1519
SatI GCNGC 5 cut(s) 128, 131, 314, 1120, 1422
Sau3AI GATC 6 cut(s) 3, 277, 634, 1168, 1185, 1312
Sau96I GGNCC 4 cut(s) 91, 481, 990, 1084
SchI GAGTC 4 cut(s) 620, 748, 1258, 1463
ScrFI CCNGG 4 cut(s) 159, 554, 674, 1399
SduI GDGCHC 1 cut(s) 840
SfaNI GCATC 4 cut(s) 48, 142, 553, 934
SfuI TTCGAA 3 cut(s) 145, 359, 434
SinI GGWCC 3 cut(s) 91, 481, 1084
SmlI CTYRAG 2 cut(s) 455, 1459
SmoI CTYRAG 2 cut(s) 455, 1459
SsiI CCGC 4 cut(s) 313, 856, 1075, 1198
SspMI CTAG 3 cut(s) 572, 794, 1488
StyD4I CCNGG 4 cut(s) 157, 552, 672, 1397
StyI CCWWGG 2 cut(s) 1024, 1428
TaaI ACNGT 4 cut(s) 197, 705, 964, 978
TaiI ACGT 2 cut(s) 1147, 1390
TaqI TCGA 7 cut(s) 31, 40, 145, 284, 359, 434, 700
TauI GCSGC 1 cut(s) 316
TfiI GAWTC 7 cut(s) 183, 436, 664, 865, 1207, 1258, 1391
Tru1I TTAA 4 cut(s) 80, 104, 656, 1519
Tru9I TTAA 4 cut(s) 80, 104, 656, 1519
TscAI CASTG 5 cut(s) 217, 1115, 1259, 1447, 1480
TseFI GTSAC 2 cut(s) 373, 1250
TseI GCWGC 4 cut(s) 127, 130, 1119, 1421
Tsp45I GTSAC 2 cut(s) 373, 1250
TspDTI ATGAA 5 cut(s) 223, 336, 679, 697, 733
TspGWI ACGGA 2 cut(s) 270, 1085
TspRI CASTG 5 cut(s) 217, 1115, 1259, 1447, 1480
Van91I CCANNNNNTGG 1 cut(s) 490
VpaK11BI GGWCC 3 cut(s) 91, 481, 1084
XapI RAATTY 5 cut(s) 12, 147, 362, 789, 1067
XcmI CCANNNNNNNNNTGG 1 cut(s) 677
XmiI GTMKAC 2 cut(s) 118, 404
XmnI GAANNNNTTC 1 cut(s) 1041
XspI CTAG 3 cut(s) 572, 794, 1488
Zsp2I ATGCAT 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.