Rorug02G0469200

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
60002413 .. 60003610
1198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0469200.1

Sequence Viewer

Length: 1029 bp
ATGAGTCAGATGCCGCCGCCGCCGCCGGGAGGTTTGGCCGCCAGAAAGGACCCGTCGGGGAAGACACGGCGTCGTCCTGACCTGAGTCTACCGATGCCGAGGCGGGACACGTCTCTGGCCGTGCCGTTGCCTCTGCCGCCGGGACCGAGCTCGGCTCCGTCCGGGTCCGAGGCGGTGATGATCAACTTCTCCGAGCTGGAGCGGGCGAACCGGATTGGGAGCGGAGCCGGCGGCACGGTCTACAAGGTTATTCACAAGCCGACCGGGCGGGTCTACGCGCTGAAAGTCATCTACGGCAACCACGACGAGTCGACCCGGCACCAGATCTGCCGCGAGATCCAAATCCTCCGCGACGTCGATAACCCTAACGTCGTCAAGTGCCACGATATGTTTGACCACAACGGCGAGATCCAGGTGCTGCTGGAGTTCATGGACGGCGGTTCGTTAGAGGGGAAGCACATCGCCAACGAGAAAAGCCTCTCCGACTTGACACGGCAGATCCTCACCGGATTGGCCTACCTCCACAAACGGCACATCGTCCACCGCGATATCAAGCCTTCGAATCTCTTGATCAACGCCCGGAATCAGGTCAAGATCGCCGATTTCGGAGTCAGCCGGATTTTGGCGCAGACTATGGACCCGTGTAACTCCTCTGTAGGGACCATAGCCTACATGAGCCCGGAGAGGATCAACACCGATCTCAATCAGGGCAGGTACGACGGCTACGCCGGCGATATTTGGAGCCTGGGGGTCAGCATCTTGGAGTTTTACATGGGCCGATTTCCGTTCAATGTGCAGCGGGCTCAGGGAGATTGGGCCAGCTTAATGTGGGCCATTTGTATGTCTCAGCCGCCTGAGGCTCCGCCGACGGCCTCCAGAGAGTTCCGGCATTTCATTGCTTGCTGTTTGCAGAGAGAGCCGAACAGGAGAATGTCGGCGCAGCAGTTGTTGCAGCACCCATTTATCTCCGGCAATGGGGGCGTGCCGCCGCAGGAAGATGATGATGATGATGATGATGATGATGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

342

Amino Acids

37.91

Weight (kDa)

6.26

Isoelectric Point (pI)

61.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 68 - 322 5.8e-68 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 68 - 318 5.4e-39 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 153 - 267 2.1e-06 Kinase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 357
Acc36I ACCTGC 1 cut(s) 702
AccB1I GGYRCC 1 cut(s) 318
AccBSI CCGCTC 2 cut(s) 202, 222
AccI GTMKAC 4 cut(s) 88, 240, 273, 311
AccII CGCG 4 cut(s) 278, 333, 351, 546
AclWI GGATC 4 cut(s) 331, 403, 493, 695
AcoI YGGCCR 2 cut(s) 36, 117
AcyI GRCGYC 2 cut(s) 70, 354
AfaI GTAC 1 cut(s) 716
AfiI CCNNNNNNNGG 6 cut(s) 26, 29, 586, 622, 657, 975
AflIII ACRYGT 1 cut(s) 108
AgsI TTSAA 1 cut(s) 790
AhdI GACNNNNNGTC 1 cut(s) 69
AjiI CACGTC 1 cut(s) 111
AjnI CCWGG 2 cut(s) 411, 744
AluBI AGCT 3 cut(s) 150, 196, 822
AluI AGCT 3 cut(s) 150, 196, 822
Alw21I GWGCWC 1 cut(s) 152
Alw26I GTCTC 2 cut(s) 117, 849
AlwI GGATC 4 cut(s) 331, 403, 493, 695
AlwNI CAGNNNCTG 1 cut(s) 418
AoxI GGCC 7 cut(s) 36, 117, 513, 775, 816, 831, 870
ApeKI GCWGC 4 cut(s) 418, 796, 940, 952
AspLEI GCGC 3 cut(s) 280, 628, 940
AspS9I GGNCC 8 cut(s) 49, 143, 165, 637, 660, 775, 816, 831
AsuC2I CCSGG 7 cut(s) 27, 141, 163, 265, 316, 580, 680
AsuHPI GGTGA 2 cut(s) 187, 496
AsuII TTCGAA 1 cut(s) 560
AvaII GGWCC 5 cut(s) 49, 143, 165, 637, 660
AxyI CCTNAGG 1 cut(s) 855
BanI GGYRCC 1 cut(s) 318
BanII GRGCYC 3 cut(s) 152, 680, 805
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 152
BbvI GCAGC 4 cut(s) 405, 808, 952, 964
BccI CCATC 1 cut(s) 1016
BciT130I CCWGG 2 cut(s) 413, 746
BclI TGATCA 2 cut(s) 180, 570
BcnI CCSGG 7 cut(s) 27, 141, 163, 265, 316, 580, 680
BcoDI GTCTC 2 cut(s) 117, 849
BfmI CTRYAG 1 cut(s) 654
BfuAI ACCTGC 1 cut(s) 702
BglI GCCNNNNNGGC 1 cut(s) 265
BglII AGATCT 1 cut(s) 324
Bme1390I CCNGG 9 cut(s) 27, 141, 163, 265, 316, 413, 580, 680, 746
Bme18I GGWCC 5 cut(s) 49, 143, 165, 637, 660
BmeRI GACNNNNNGTC 1 cut(s) 69
BmgBI CACGTC 1 cut(s) 111
BmgT120I GGNCC 8 cut(s) 49, 143, 165, 637, 660, 775, 816, 831
BmrFI CCNGG 9 cut(s) 27, 141, 163, 265, 316, 413, 580, 680, 746
BmsI GCATC 2 cut(s) 84, 765
BoxI GACNNNNGTC 1 cut(s) 84
BpiI GAAGAC 1 cut(s) 68
BplI GAGNNNNNCTC 2 cut(s) 139, 171
BpmI CTGGAG 3 cut(s) 218, 443, 859
Bpu10I CCTNAGC 1 cut(s) 804
Bpu14I TTCGAA 1 cut(s) 560
BpuMI CCSGG 7 cut(s) 27, 141, 163, 265, 316, 580, 680
BsaBI GATNNNNATC 2 cut(s) 341, 702
BsaHI GRCGYC 2 cut(s) 70, 354
BsaJI CCNNGG 3 cut(s) 98, 168, 745
BsaWI WCCGGW 2 cut(s) 210, 506
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 29, 586, 622, 657, 975
Bse118I RCCGGY 2 cut(s) 227, 728
Bse21I CCTNAGG 1 cut(s) 855
Bse3DI GCAATG 2 cut(s) 894, 979
Bse8I GATNNNNATC 2 cut(s) 341, 702
BseBI CCWGG 2 cut(s) 413, 746
BseDI CCNNGG 3 cut(s) 98, 168, 745
BseJI GATNNNNATC 2 cut(s) 341, 702
BseLI CCNNNNNNNGG 6 cut(s) 26, 29, 586, 622, 657, 975
BseMI GCAATG 2 cut(s) 894, 979
BseMII CTCAG 4 cut(s) 74, 818, 846, 860
BseRI GAGGAG 1 cut(s) 640
BseXI GCAGC 4 cut(s) 405, 808, 952, 964
BsgI GTGCAG 1 cut(s) 815
Bsh1236I CGCG 4 cut(s) 278, 333, 351, 546
Bsh1285I CGRYCG 1 cut(s) 264
BshFI GGCC 7 cut(s) 38, 119, 515, 777, 818, 833, 872
BshNI GGYRCC 1 cut(s) 318
BsiEI CGRYCG 1 cut(s) 264
BsiHKAI GWGCWC 1 cut(s) 152
BslFI GGGAC 3 cut(s) 119, 156, 673
BslI CCNNNNNNNGG 6 cut(s) 26, 29, 586, 622, 657, 975
BsmAI GTCTC 2 cut(s) 117, 849
BsmBI CGTCTC 1 cut(s) 117
BsmFI GGGAC 3 cut(s) 119, 156, 673
BsnI GGCC 7 cut(s) 38, 119, 515, 777, 818, 833, 872
Bsp119I TTCGAA 1 cut(s) 560
Bsp1286I GDGCHC 3 cut(s) 152, 680, 805
Bsp143I GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
BspANI GGCC 7 cut(s) 38, 119, 515, 777, 818, 833, 872
BspCNI CTCAG 4 cut(s) 75, 817, 847, 859
BspFNI CGCG 4 cut(s) 278, 333, 351, 546
BspMI ACCTGC 1 cut(s) 702
BspPI GGATC 4 cut(s) 331, 403, 493, 695
BspT104I TTCGAA 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 318
BsrBI CCGCTC 2 cut(s) 202, 222
BsrDI GCAATG 2 cut(s) 894, 979
BsrFI RCCGGY 2 cut(s) 227, 728
BssAI RCCGGY 2 cut(s) 227, 728
BssECI CCNNGG 3 cut(s) 98, 168, 745
BssMI GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
BssNI GRCGYC 2 cut(s) 70, 354
Bst2UI CCWGG 2 cut(s) 413, 746
Bst4CI ACNGT 1 cut(s) 238
BstACI GRCGYC 2 cut(s) 70, 354
BstAPI GCANNNNNTGC 1 cut(s) 949
BstBI TTCGAA 1 cut(s) 560
BstC8I GCNNGC 7 cut(s) 204, 229, 730, 801, 820, 901, 983
BstDEI CTNAG 4 cut(s) 83, 804, 846, 855
BstFNI CGCG 4 cut(s) 278, 333, 351, 546
BstHHI GCGC 3 cut(s) 280, 628, 940
BstKTI GATC 9 cut(s) 183, 327, 339, 411, 501, 573, 597, 690, 700
BstMAI GTCTC 2 cut(s) 117, 849
BstMBI GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
BstMCI CGRYCG 1 cut(s) 264
BstMWI GCNNNNNNNGC 9 cut(s) 19, 22, 136, 228, 265, 729, 916, 949, 978
BstNI CCWGG 2 cut(s) 413, 746
BstPAI GACNNNNGTC 1 cut(s) 84
BstSCI CCNGG 9 cut(s) 25, 139, 161, 263, 314, 411, 578, 678, 744
BstSFI CTRYAG 1 cut(s) 654
BstUI CGCG 4 cut(s) 278, 333, 351, 546
BstV1I GCAGC 4 cut(s) 405, 808, 952, 964
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 4 cut(s) 324, 336, 408, 498
BstYI RGATCY 4 cut(s) 324, 336, 408, 498
Bsu36I CCTNAGG 1 cut(s) 855
BsuRI GGCC 7 cut(s) 38, 119, 515, 777, 818, 833, 872
BtgZI GCGATG 1 cut(s) 445
BtrI CACGTC 1 cut(s) 111
BveI ACCTGC 1 cut(s) 702
Cac8I GCNNGC 7 cut(s) 204, 229, 730, 801, 820, 901, 983
CaiI CAGNNNCTG 1 cut(s) 418
CfoI GCGC 3 cut(s) 280, 628, 940
Cfr10I RCCGGY 2 cut(s) 227, 728
Cfr13I GGNCC 8 cut(s) 49, 143, 165, 637, 660, 775, 816, 831
CseI GACGC 1 cut(s) 59
Csp6I GTAC 1 cut(s) 715
CviAII CATG 3 cut(s) 430, 673, 772
CviQI GTAC 1 cut(s) 715
DdeI CTNAG 4 cut(s) 83, 804, 846, 855
DpnI GATC 9 cut(s) 182, 326, 338, 410, 500, 572, 596, 689, 699
DpnII GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
DriI GACNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 2 cut(s) 36, 117
Eam1105I GACNNNNNGTC 1 cut(s) 69
EciI GGCGGA 1 cut(s) 852
Ecl136II GAGCTC 1 cut(s) 150
Eco24I GRGCYC 3 cut(s) 152, 680, 805
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 5 cut(s) 49, 143, 165, 637, 660
Eco53kI GAGCTC 1 cut(s) 150
Eco81I CCTNAGG 1 cut(s) 855
EcoICRI GAGCTC 1 cut(s) 150
EcoO109I RGGNCCY 1 cut(s) 49
EcoRII CCWGG 2 cut(s) 411, 744
EcoRV GATATC 1 cut(s) 550
EcoT38I GRGCYC 3 cut(s) 152, 680, 805
Esp3I CGTCTC 1 cut(s) 117
FaeI CATG 3 cut(s) 433, 676, 775
FaiI YATR 7 cut(s) 389, 431, 635, 665, 674, 773, 842
FaqI GGGAC 3 cut(s) 119, 156, 673
FatI CATG 3 cut(s) 429, 672, 771
FauI CCCGC 4 cut(s) 96, 195, 261, 792
FbaI TGATCA 2 cut(s) 180, 570
FblI GTMKAC 4 cut(s) 88, 240, 273, 311
FriOI GRGCYC 3 cut(s) 152, 680, 805
GlaI GCGC 3 cut(s) 279, 627, 939
GsuI CTGGAG 3 cut(s) 218, 443, 859
HaeIII GGCC 7 cut(s) 38, 119, 515, 777, 818, 833, 872
HgaI GACGC 1 cut(s) 59
HhaI GCGC 3 cut(s) 280, 628, 940
Hin1I GRCGYC 2 cut(s) 70, 354
Hin1II CATG 3 cut(s) 433, 676, 775
Hin6I GCGC 3 cut(s) 278, 626, 938
HinP1I GCGC 3 cut(s) 278, 626, 938
HincII GTYRAC 1 cut(s) 312
HindII GTYRAC 1 cut(s) 312
HinfI GANTC 6 cut(s) 4, 85, 308, 562, 583, 609
HphI GGTGA 2 cut(s) 187, 496
Hpy166II GTNNAC 5 cut(s) 89, 241, 274, 312, 541
Hpy188I TCNGA 5 cut(s) 9, 169, 193, 484, 608
Hpy188III TCNNGA 4 cut(s) 77, 568, 592, 876
Hpy8I GTNNAC 5 cut(s) 89, 241, 274, 312, 541
Hpy99I CGWCG 8 cut(s) 58, 75, 308, 356, 359, 374, 722, 871
HpyAV CCTTC 1 cut(s) 567
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4IV ACGT 3 cut(s) 110, 354, 369
HpyCH4V TGCA 3 cut(s) 796, 910, 952
HpyF10VI GCNNNNNNNGC 9 cut(s) 19, 22, 136, 228, 265, 729, 916, 949, 978
HpyF3I CTNAG 4 cut(s) 83, 804, 846, 855
HpySE526I ACGT 3 cut(s) 110, 354, 369
Hsp92I GRCGYC 2 cut(s) 70, 354
Hsp92II CATG 3 cut(s) 433, 676, 775
HspAI GCGC 3 cut(s) 278, 626, 938
KroI GCCGGC 2 cut(s) 227, 728
KroNI GCCGGC 2 cut(s) 229, 730
Ksp22I TGATCA 2 cut(s) 180, 570
Kzo9I GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
LmnI GCTCC 6 cut(s) 160, 199, 219, 224, 741, 865
Lsp1109I GCAGC 4 cut(s) 405, 808, 952, 964
LweI GCATC 2 cut(s) 84, 765
MaeII ACGT 3 cut(s) 110, 354, 369
MaeIII GTNAC 1 cut(s) 644
MalI GATC 9 cut(s) 182, 326, 338, 410, 500, 572, 596, 689, 699
MbiI CCGCTC 2 cut(s) 202, 222
MboI GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
MboII GAAGA 2 cut(s) 73, 1007
MflI RGATCY 4 cut(s) 324, 336, 408, 498
MhlI GDGCHC 3 cut(s) 152, 680, 805
MlyI GAGTC 4 cut(s) 13, 94, 317, 618
MmeI TCCRAC 1 cut(s) 507
MreI CGCCGGCG 1 cut(s) 728
MroNI GCCGGC 2 cut(s) 227, 728
MseI TTAA 1 cut(s) 824
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 1 cut(s) 799
MspR9I CCNGG 9 cut(s) 27, 141, 163, 265, 316, 413, 580, 680, 746
MvaI CCWGG 2 cut(s) 413, 746
MvnI CGCG 4 cut(s) 278, 333, 351, 546
MwoI GCNNNNNNNGC 9 cut(s) 19, 22, 136, 228, 265, 729, 916, 949, 978
NaeI GCCGGC 2 cut(s) 229, 730
NciI CCSGG 7 cut(s) 27, 141, 163, 265, 316, 580, 680
NdeII GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
NgoMIV GCCGGC 2 cut(s) 227, 728
NlaIII CATG 3 cut(s) 433, 676, 775
NmeAIII GCCGAG 2 cut(s) 123, 131
NspV TTCGAA 1 cut(s) 560
PcsI WCGNNNNNNNCGW 2 cut(s) 300, 543
PdiI GCCGGC 2 cut(s) 229, 730
PfeI GAWTC 2 cut(s) 562, 583
PleI GAGTC 4 cut(s) 12, 93, 316, 617
PpsI GAGTC 4 cut(s) 12, 93, 316, 617
PpuMI RGGWCCY 1 cut(s) 49
PshAI GACNNNNGTC 1 cut(s) 84
Psp124BI GAGCTC 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 49
Psp6I CCWGG 2 cut(s) 411, 744
PspGI CCWGG 2 cut(s) 411, 744
PspPI GGNCC 8 cut(s) 49, 143, 165, 637, 660, 775, 816, 831
PspPPI RGGWCCY 1 cut(s) 49
PstNI CAGNNNCTG 1 cut(s) 418
PsuI RGATCY 4 cut(s) 324, 336, 408, 498
RsaI GTAC 1 cut(s) 716
RsaNI GTAC 1 cut(s) 715
RseI CAYNNNNRTG 1 cut(s) 839
SacI GAGCTC 1 cut(s) 152
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 1 cut(s) 824
Sau3AI GATC 9 cut(s) 180, 324, 336, 408, 498, 570, 594, 687, 697
Sau96I GGNCC 8 cut(s) 49, 143, 165, 637, 660, 775, 816, 831
SchI GAGTC 4 cut(s) 13, 94, 317, 618
ScrFI CCNGG 9 cut(s) 27, 141, 163, 265, 316, 413, 580, 680, 746
SduI GDGCHC 3 cut(s) 152, 680, 805
SfaNI GCATC 2 cut(s) 84, 765
SfcI CTRYAG 1 cut(s) 654
SfuI TTCGAA 1 cut(s) 560
SgrAI CRCCGGYG 1 cut(s) 728
SinI GGWCC 5 cut(s) 49, 143, 165, 637, 660
SmiMI CAYNNNNRTG 1 cut(s) 839
SstI GAGCTC 1 cut(s) 152
StyD4I CCNGG 9 cut(s) 25, 139, 161, 263, 314, 411, 578, 678, 744
TaaI ACNGT 1 cut(s) 238
TaiI ACGT 3 cut(s) 113, 357, 372
TaqI TCGA 3 cut(s) 311, 357, 560
TaqII GACCGA 1 cut(s) 160
TfiI GAWTC 2 cut(s) 562, 583
Tru1I TTAA 1 cut(s) 824
Tru9I TTAA 1 cut(s) 824
TseI GCWGC 4 cut(s) 418, 796, 940, 952
TspDTI ATGAA 2 cut(s) 418, 883
TspGWI ACGGA 2 cut(s) 147, 774
VpaK11BI GGWCC 5 cut(s) 49, 143, 165, 637, 660
XmiI GTMKAC 4 cut(s) 88, 240, 273, 311
ZraI GACGTC 1 cut(s) 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.