MD17G1102400.v1.1

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
8705521 .. 8709109
3589 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1102400.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGATAAAAAATATATTGGGTAAAATACCTCGGAAACCATCGAAATCATCGCAAAGCGATGCGTATAGTGACGGAGGGGCCAATGGGAATGGCCCCAATCCATCCCACAACTCAAAATCGAGCTCTTCTTCGTCAAAGTCTTCGAATTTGGGTTCAGGCAATTCGCGTTCGAGCAATGGGACTCTTGCCTCACACTCCTCGAGCGCAGTTAAATCAAATCACTCGAAGAAATCAGCTCCCATTGCAACCCAAGTAGGTCCTTTGTTTTCTTTGGGTGCATATGAGCCTCTGCCGAGTTTCAGGGACGTTCCAAGTTCAGAAAGGCAGAATCATTTTATTAAGAAGTTGAACATGTGTTGTGTTGTGTTTGATTTTAATGATCCCTCAAAGAATCTCAAGGAGAAGGATGTCAAGCGGCAGACTTTACTTGAACTTGTTGATTACATTTCATCAGTAACATCAAAGTTCAATGAGGTGGTAATGCAAGAGATTACGAAGATGGTGGCGACCAATCTGTTTCGTACACTTTCGTCTTCCAATCTTGATAACAAGGGTCCTGATATGTATGACCAAGACGAGGAGGACCAGATGTTGGAACCAGCTTGGCCTCATCTTCAGGTTGTGTATGAATTTCTATTAAGATTTGTGGCTTCGCCAGAGACCGATGCTAAGCTAGCTAAAAGATATATTGACCACTCGTTTGTGTTGAAGTTGCTTGGTTTGTTTGACTCTGAGGACCAAAGAGAGAGGGAATACTTAAAGACGATCCTCCATCGCATTTATGGGAAGTTCATGGTGCATCGACCATTCATTAGGAAATCCATCAACAACATCTTCTTTTGGTTCATTTTTGAGACCGAGAAGCACAATGGGATTGCGGAATTGCTTGAAATCTTAGGCAGCATAATCAATGGTTTTGCTTTGCCTTTGAAGGAAGAGCACAAGCTGTTCCTTGTTCGTGCCTTGATTCCTCTTCACAAGCCCAAGTGTGTATCTATGTACCATCAGCAACTCTCATATTGCATCAGTCAGTTTGTGGAGAAAGATGCCAAGTTGGCGGATACAGTGATTCGAGGGCTGCTGAAGTATTGGCCCATAACTAATAGTTCAAAGGAAGTTATGTTCCTTGGTGAATTAGAAGAAGTTTTGGAAGCTACCCAGCCATCAGAATTTCAGCGCTGCATGGTCCCCTTGTTTCGTCAAATTGGTCACTGTCTCAACAGCTCACATTTTCAGGTAGCTGAACGTGCATTGTTTTTGTGGAATAACGATCATATAAGAAATTTGATTACACAGAATCGCCAAGTGATTCTGCCAATAATCTTCCCAGCTCTGGAGAAAAACACACGAAGTCATTGGAATCAAGCTGTTCAGAGTTTGACATTGAATGTGAAAAAGATATTCTCAGATGTTGATCAAGAACTCTTCGATGAGTGCTTGGTTGGCTTCCAAGAAGATGAATCCAAAGAGAAAGAAACACAGGAGAAACGTGAATCAACGTGGAAACGCTTGGAAGATGTGGCTGCTTCCAAGGCTTTGGGCAATGAGGCTGTGCTTGTCTCAAGATTTGCTTCCTCCGTTGCCATTGCTACTAACCCAAAACCACGGGCATCTTCAGGTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

542

Amino Acids

61.28

Weight (kDa)

8.46

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 97 - 507 1.6e-191 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 592
AccII CGCG 1 cut(s) 166
AciI CCGC 3 cut(s) 415, 878, 1058
AclWI GGATC 2 cut(s) 374, 760
AcsI RAATTY 4 cut(s) 145, 629, 1169, 1282
AcuI CTGAAG 3 cut(s) 599, 1103, 1599
AfaI GTAC 2 cut(s) 523, 1001
AfeI AGCGCT 1 cut(s) 1178
AfiI CCNNNNNNNGG 3 cut(s) 577, 592, 1333
AflIII ACRYGT 1 cut(s) 351
AgsI TTSAA 8 cut(s) 349, 431, 469, 709, 890, 931, 1110, 1387
AloI GAACNNNNNNTCC 2 cut(s) 1106, 1138
Alw21I GWGCWC 2 cut(s) 125, 942
Alw26I GTCTC 4 cut(s) 653, 848, 1220, 1564
AlwI GGATC 2 cut(s) 374, 760
Ama87I CYCGRG 1 cut(s) 199
Aor51HI AGCGCT 1 cut(s) 1178
AoxI GGCC 4 cut(s) 78, 91, 605, 1091
ApeKI GCWGC 4 cut(s) 900, 1078, 1179, 1523
ApoI RAATTY 4 cut(s) 145, 629, 1169, 1282
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AspLEI GCGC 2 cut(s) 206, 1179
AspS9I GGNCC 8 cut(s) 78, 92, 257, 554, 583, 736, 1092, 1186
AsuHPI GGTGA 1 cut(s) 1142
AsuII TTCGAA 1 cut(s) 143
AsuNHI GCTAGC 1 cut(s) 673
AvaI CYCGRG 1 cut(s) 199
AvaII GGWCC 5 cut(s) 257, 554, 583, 736, 1186
BanII GRGCYC 1 cut(s) 125
BbsI GAAGAC 2 cut(s) 132, 525
Bbv12I GWGCWC 2 cut(s) 125, 942
BbvI GCAGC 4 cut(s) 912, 1065, 1166, 1510
BccI CCATC 7 cut(s) 46, 109, 493, 780, 830, 1011, 1171
BciVI GTATCC 1 cut(s) 1054
BclI TGATCA 1 cut(s) 1414
BcoDI GTCTC 4 cut(s) 653, 848, 1220, 1564
BfaI CTAG 1 cut(s) 674
BfoI RGCGCY 1 cut(s) 1180
BfuI GTATCC 1 cut(s) 1054
BglI GCCNNNNNGGC 1 cut(s) 1055
BisI GCNGC 5 cut(s) 416, 901, 1079, 1180, 1524
BlpI GCTNAGC 1 cut(s) 669
BlsI GCNGC 5 cut(s) 417, 902, 1080, 1181, 1525
Bme18I GGWCC 5 cut(s) 257, 554, 583, 736, 1186
BmeT110I CYCGRG 1 cut(s) 199
BmgT120I GGNCC 8 cut(s) 78, 92, 257, 554, 583, 736, 1092, 1186
BmiI GGNNCC 5 cut(s) 79, 94, 555, 597, 1188
BmsI GCATC 6 cut(s) 49, 655, 808, 1032, 1036, 1619
BmtI GCTAGC 1 cut(s) 677
BpiI GAAGAC 2 cut(s) 132, 525
BpmI CTGGAG 1 cut(s) 1355
Bpu1102I GCTNAGC 1 cut(s) 669
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 2 cut(s) 380, 1546
BsaBI GATNNNNATC 1 cut(s) 1413
BsaI GGTCTC 2 cut(s) 653, 848
BsaJI CCNNGG 4 cut(s) 29, 1126, 1530, 1604
Bsc4I CCNNNNNNNGG 3 cut(s) 577, 592, 1333
Bse3DI GCAATG 4 cut(s) 181, 240, 1549, 1584
Bse8I GATNNNNATC 1 cut(s) 1413
BseDI CCNNGG 4 cut(s) 29, 1126, 1530, 1604
BseGI GGATG 2 cut(s) 101, 412
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 3 cut(s) 577, 592, 1333
BseMI GCAATG 4 cut(s) 181, 240, 1549, 1584
BseMII CTCAG 2 cut(s) 723, 1419
BseRI GAGGAG 2 cut(s) 187, 593
BseXI GCAGC 4 cut(s) 912, 1065, 1166, 1510
BseYI CCCAGC 2 cut(s) 1158, 1327
Bsh1236I CGCG 1 cut(s) 166
BshFI GGCC 4 cut(s) 80, 93, 607, 1093
BsiHKAI GWGCWC 2 cut(s) 125, 942
BsiHKCI CYCGRG 1 cut(s) 199
BslFI GGGAC 3 cut(s) 193, 317, 1172
BslI CCNNNNNNNGG 3 cut(s) 577, 592, 1333
BsmAI GTCTC 4 cut(s) 653, 848, 1220, 1564
BsmFI GGGAC 3 cut(s) 193, 317, 1172
BsnI GGCC 4 cut(s) 80, 93, 607, 1093
Bso31I GGTCTC 2 cut(s) 653, 848
BsoBI CYCGRG 1 cut(s) 199
Bsp119I TTCGAA 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 125, 942
Bsp143I GATC 4 cut(s) 379, 765, 1270, 1414
Bsp1720I GCTNAGC 1 cut(s) 669
BspACI CCGC 3 cut(s) 415, 878, 1058
BspANI GGCC 4 cut(s) 80, 93, 607, 1093
BspCNI CTCAG 2 cut(s) 724, 1418
BspFNI CGCG 1 cut(s) 166
BspLI GGNNCC 5 cut(s) 79, 94, 555, 597, 1188
BspOI GCTAGC 1 cut(s) 677
BspPI GGATC 2 cut(s) 374, 760
BspQI GCTCTTC 2 cut(s) 130, 930
BspT104I TTCGAA 1 cut(s) 143
BspTNI GGTCTC 2 cut(s) 653, 848
BsrDI GCAATG 4 cut(s) 181, 240, 1549, 1584
BssECI CCNNGG 4 cut(s) 29, 1126, 1530, 1604
BssMI GATC 4 cut(s) 379, 765, 1270, 1414
BssT1I CCWWGG 2 cut(s) 1126, 1530
Bst4CI ACNGT 2 cut(s) 1066, 1214
Bst6I CTCTTC 4 cut(s) 130, 930, 978, 1430
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 1 cut(s) 675
BstDEI CTNAG 4 cut(s) 669, 732, 895, 1405
BstDSI CCRYGG 1 cut(s) 1604
BstF5I GGATG 2 cut(s) 101, 412
BstFNI CGCG 1 cut(s) 166
BstH2I RGCGCY 1 cut(s) 1180
BstHHI GCGC 2 cut(s) 206, 1179
BstKTI GATC 4 cut(s) 382, 768, 1273, 1417
BstMAI GTCTC 4 cut(s) 653, 848, 1220, 1564
BstMBI GATC 4 cut(s) 379, 765, 1270, 1414
BstMWI GCNNNNNNNGC 6 cut(s) 242, 674, 1055, 1247, 1443, 1532
BstNSI RCATGY 1 cut(s) 355
BstUI CGCG 1 cut(s) 166
BstV1I GCAGC 4 cut(s) 912, 1065, 1166, 1510
BstV2I GAAGAC 2 cut(s) 132, 525
BstXI CCANNNNNNTGG 1 cut(s) 1537
BsuI GTATCC 1 cut(s) 1054
BsuRI GGCC 4 cut(s) 80, 93, 607, 1093
BtgI CCRYGG 1 cut(s) 1604
BtgZI GCGATG 3 cut(s) 33, 72, 758
BtsCI GGATG 2 cut(s) 101, 412
BtsIMutI CAGTG 2 cut(s) 1071, 1210
Cac8I GCNNGC 1 cut(s) 675
CfoI GCGC 2 cut(s) 206, 1179
Cfr13I GGNCC 8 cut(s) 78, 92, 257, 554, 583, 736, 1092, 1186
Csp6I GTAC 2 cut(s) 522, 1000
CviAII CATG 3 cut(s) 352, 793, 1183
CviQI GTAC 2 cut(s) 522, 1000
DdeI CTNAG 4 cut(s) 669, 732, 895, 1405
DpnI GATC 4 cut(s) 381, 767, 1272, 1416
DpnII GATC 4 cut(s) 379, 765, 1270, 1414
Eam1104I CTCTTC 4 cut(s) 130, 930, 978, 1430
EarI CTCTTC 4 cut(s) 130, 930, 978, 1430
EciI GGCGGA 1 cut(s) 1073
Ecl136II GAGCTC 1 cut(s) 123
Eco130I CCWWGG 2 cut(s) 1126, 1530
Eco24I GRGCYC 1 cut(s) 125
Eco31I GGTCTC 2 cut(s) 653, 848
Eco47I GGWCC 5 cut(s) 257, 554, 583, 736, 1186
Eco47III AGCGCT 1 cut(s) 1178
Eco53kI GAGCTC 1 cut(s) 123
Eco57I CTGAAG 3 cut(s) 599, 1103, 1599
Eco88I CYCGRG 1 cut(s) 199
EcoICRI GAGCTC 1 cut(s) 123
EcoO109I RGGNCCY 2 cut(s) 257, 554
EcoT14I CCWWGG 2 cut(s) 1126, 1530
EcoT38I GRGCYC 1 cut(s) 125
ErhI CCWWGG 2 cut(s) 1126, 1530
FaeI CATG 3 cut(s) 355, 796, 1186
FalI AAGNNNNNCTT 2 cut(s) 1555, 1587
FaqI GGGAC 3 cut(s) 193, 317, 1172
FatI CATG 3 cut(s) 351, 792, 1182
FauNDI CATATG 1 cut(s) 280
FbaI TGATCA 1 cut(s) 1414
Fnu4HI GCNGC 5 cut(s) 416, 901, 1079, 1180, 1524
FokI GGATG 2 cut(s) 88, 419
FriOI GRGCYC 1 cut(s) 125
Fsp4HI GCNGC 5 cut(s) 416, 901, 1079, 1180, 1524
FspBI CTAG 1 cut(s) 674
GlaI GCGC 2 cut(s) 205, 1178
GluI GCNGC 5 cut(s) 416, 901, 1079, 1180, 1524
GsaI CCCAGC 2 cut(s) 1162, 1331
GsuI CTGGAG 1 cut(s) 1355
HaeII RGCGCY 1 cut(s) 1180
HaeIII GGCC 4 cut(s) 80, 93, 607, 1093
HhaI GCGC 2 cut(s) 206, 1179
Hin1II CATG 3 cut(s) 355, 796, 1186
Hin6I GCGC 2 cut(s) 204, 1177
HinP1I GCGC 2 cut(s) 204, 1177
HphI GGTGA 1 cut(s) 1142
Hpy166II GTNNAC 1 cut(s) 524
Hpy188I TCNGA 6 cut(s) 33, 319, 733, 1168, 1374, 1408
Hpy188III TCNNGA 5 cut(s) 542, 557, 1334, 1418, 1563
Hpy8I GTNNAC 1 cut(s) 524
HpyAV CCTTC 2 cut(s) 397, 925
HpyCH4III ACNGT 2 cut(s) 1066, 1214
HpyCH4IV ACGT 4 cut(s) 306, 1246, 1489, 1499
HpyCH4V TGCA 7 cut(s) 245, 278, 484, 799, 1023, 1182, 1250
HpyF10VI GCNNNNNNNGC 6 cut(s) 242, 674, 1055, 1247, 1443, 1532
HpyF3I CTNAG 4 cut(s) 669, 732, 895, 1405
HpySE526I ACGT 4 cut(s) 306, 1246, 1489, 1499
Hsp92II CATG 3 cut(s) 355, 796, 1186
HspAI GCGC 2 cut(s) 204, 1177
Ksp22I TGATCA 1 cut(s) 1414
Kzo9I GATC 4 cut(s) 379, 765, 1270, 1414
LguI GCTCTTC 2 cut(s) 130, 930
LmnI GCTCC 1 cut(s) 241
Lsp1109I GCAGC 4 cut(s) 912, 1065, 1166, 1510
LweI GCATC 6 cut(s) 49, 655, 808, 1032, 1036, 1619
MaeI CTAG 1 cut(s) 674
MaeII ACGT 4 cut(s) 306, 1246, 1489, 1499
MaeIII GTNAC 3 cut(s) 68, 454, 1208
MalI GATC 4 cut(s) 381, 767, 1272, 1416
MboI GATC 4 cut(s) 379, 765, 1270, 1414
MhlI GDGCHC 2 cut(s) 125, 942
MluCI AATT 8 cut(s) 145, 160, 629, 881, 1133, 1169, 1203, 1282
MlyI GAGTC 2 cut(s) 175, 722
MmeI TCCRAC 1 cut(s) 573
MseI TTAA 5 cut(s) 210, 339, 375, 638, 758
MvnI CGCG 1 cut(s) 166
MwoI GCNNNNNNNGC 6 cut(s) 242, 674, 1055, 1247, 1443, 1532
NdeI CATATG 1 cut(s) 280
NdeII GATC 4 cut(s) 379, 765, 1270, 1414
NheI GCTAGC 1 cut(s) 673
NlaIII CATG 3 cut(s) 355, 796, 1186
NlaIV GGNNCC 5 cut(s) 79, 94, 555, 597, 1188
NmeAIII GCCGAG 1 cut(s) 318
NmuCI GTSAC 2 cut(s) 68, 1208
NspI RCATGY 1 cut(s) 355
NspV TTCGAA 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 199
PciI ACATGT 1 cut(s) 351
PciSI GCTCTTC 2 cut(s) 130, 930
PfeI GAWTC 9 cut(s) 328, 391, 967, 1069, 1297, 1309, 1360, 1460, 1493
PflMI CCANNNNNTGG 1 cut(s) 592
PkrI GCNGC 5 cut(s) 417, 902, 1080, 1181, 1525
PleI GAGTC 2 cut(s) 175, 722
PpsI GAGTC 2 cut(s) 175, 722
PpuMI RGGWCCY 2 cut(s) 257, 554
PscI ACATGT 1 cut(s) 351
Psp124BI GAGCTC 1 cut(s) 125
Psp5II RGGWCCY 2 cut(s) 257, 554
PspFI CCCAGC 2 cut(s) 1158, 1327
PspN4I GGNNCC 5 cut(s) 79, 94, 555, 597, 1188
PspPI GGNCC 8 cut(s) 78, 92, 257, 554, 583, 736, 1092, 1186
PspPPI RGGWCCY 2 cut(s) 257, 554
PspXI VCTCGAGB 1 cut(s) 199
RsaI GTAC 2 cut(s) 523, 1001
RsaNI GTAC 2 cut(s) 522, 1000
SacI GAGCTC 1 cut(s) 125
SapI GCTCTTC 2 cut(s) 130, 930
SaqAI TTAA 5 cut(s) 210, 339, 375, 638, 758
SatI GCNGC 5 cut(s) 416, 901, 1079, 1180, 1524
Sau3AI GATC 4 cut(s) 379, 765, 1270, 1414
Sau96I GGNCC 8 cut(s) 78, 92, 257, 554, 583, 736, 1092, 1186
SchI GAGTC 2 cut(s) 175, 722
SduI GDGCHC 2 cut(s) 125, 942
SfaNI GCATC 6 cut(s) 49, 655, 808, 1032, 1036, 1619
Sfr274I CTCGAG 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 143
SinI GGWCC 5 cut(s) 257, 554, 583, 736, 1186
SlaI CTCGAG 1 cut(s) 199
SmlI CTYRAG 3 cut(s) 199, 395, 1561
SmoI CTYRAG 3 cut(s) 199, 395, 1561
Sse9I AATT 8 cut(s) 145, 160, 629, 881, 1133, 1169, 1203, 1282
SsiI CCGC 3 cut(s) 415, 878, 1058
SspMI CTAG 1 cut(s) 674
SstI GAGCTC 1 cut(s) 125
StyI CCWWGG 2 cut(s) 1126, 1530
TaaI ACNGT 2 cut(s) 1066, 1214
TaiI ACGT 4 cut(s) 309, 1249, 1492, 1502
TaqI TCGA 9 cut(s) 41, 119, 143, 170, 200, 224, 802, 1072, 1428
TaqII GACCGA 2 cut(s) 677, 872
TasI AATT 8 cut(s) 145, 160, 629, 881, 1133, 1169, 1203, 1282
TauI GCSGC 1 cut(s) 418
TfiI GAWTC 9 cut(s) 328, 391, 967, 1069, 1297, 1309, 1360, 1460, 1493
Tru1I TTAA 5 cut(s) 210, 339, 375, 638, 758
Tru9I TTAA 5 cut(s) 210, 339, 375, 638, 758
TscAI CASTG 2 cut(s) 1071, 1217
TseFI GTSAC 2 cut(s) 68, 1208
TseI GCWGC 4 cut(s) 900, 1078, 1179, 1523
Tsp45I GTSAC 2 cut(s) 68, 1208
TspDTI ATGAA 6 cut(s) 438, 642, 781, 799, 835, 1473
TspGWI ACGGA 2 cut(s) 87, 1567
TspRI CASTG 2 cut(s) 1071, 1217
Van91I CCANNNNNTGG 1 cut(s) 592
VpaK11BI GGWCC 5 cut(s) 257, 554, 583, 736, 1186
XapI RAATTY 4 cut(s) 145, 629, 1169, 1282
XceI RCATGY 1 cut(s) 355
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
XhoI CTCGAG 1 cut(s) 199
XspI CTAG 1 cut(s) 674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.