Rroxscaffold_2G00091370

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
12923092 .. 12926685
3594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00091370.1

Sequence Viewer

Length: 1521 bp
ATGATCAAACAAATTCTGGGTAGAATACCTCGAAAACCCTCGAAATCATCGCAAAACGATGCATATAACGATGGAGGGGTTAATGGGATTGGACCCAATTCCATTAACAGCTCAAAATCTACTTCTGCTGCTGCATCAAAGTCTTCGAATTCGGGTTCTGGGGCTTCAAGAACCAGCAATGGGATCCTTGCCCCACAGTCAAGTAAGTCCAATCAATCCAAGAAATCCGGTCAAGTAGGTCCTTTGTTGCTTTCAGGAGCCTATGAGGCCCTGCCGAGTTTTAGGGATGTTCCCAGTGCAGAGAAGCAGGGTCTTTTCATCAAGAAATTGAATATGTGTTGTGTTGTATTTGATTTCAATGATCCGTCGAAGAATGTCAGGGAGAAGGACGTAAAGAGGCAGACTTTGCTTGAACTTGTGGATTACATTTCATCCGTGAGTTCGAAATTCAATGAGGTGACAATGCAGGGGATTACTAAGATGGTGTCTACCAATTTGTTTCGGACTTTTCCATCTCCGAATCATGAGAAGAAGGCTCTTGAGACTTATGACCAAGACGAGGAGGACCAGATGTTGGAACCTGCTTGGTCTCATCTTCAGATTGTGTATGAGTTTCTGTTAAGATTTGTGGCTTCCCCGGAGACAGATGCTAAGCTAGCTAAAAGATATATTGACCAAGCGTTTGTTTTGAAATTGCTTGATTTGTTTGACTCTGAGGATCAGAGAGAGAGGGAATACTTAAAAACGATTCTCCACCGGGTTTATGGGAAGTTCATGGTACATCGACCGTTCATTAGGAAAGCCATCAACAATATCTTCTTTTGGTTCATATTTGAGACTCAGAAGCACAATGGGATTGCAGAAATGCTTGAAATTCTAGGCAGTATAATCAATGGTTTTGCTTTGCCTTTGAAGGAAGAGCACAAGCTGTTCCTTGTCCGCGCCTTGATTCCCCTTCACAAGCCTAAATGTGTATCTATGTACCATCAGCAACTTTCCTATTGCATTTCTCAGTTCGTGGAGAAAGATGCCAAGCTATCTGATACCGTGATTAGAGGACTGTTGAAGTATTGGCCCATAACCAATAGTTCAAAGGAAGTTATGTTCCTTGGTGAATTGGAAGAAGTTCTGGAAGCTACCCAGCCATCAGAATTTCAGCGGTGCATGGTCCCTCTTTTCCGTCAAATTGGTCAGTGCCTCAGCAGCTCACATTTTCAGGTAGCTGAACGTGCATTGTTTTTGTGGAATAATGATCACATAAGAACTTTGATCACACAGAACCGCCAAGTGATTCTGCCAATAATCTTCCCTGCTATGGAGGAAAACACTCGGAGTCACTGGAATCAAGCTGTTCGGAGTTTGACATTGAATGTCAGAAAGATATTCTCAGATGTTGATCAAGAACTCTTTGATGAGTGCTTGGCTACATTCAAGAAGATGAAACTAAAGAGAAGGAAACACAGGAGAAACGTGAATCAACCTGGAAGCGCTTGGAAGATGTGGCTGCCTCCAAGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

58.02

Weight (kDa)

9.39

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 91 - 499 1.4e-184 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 589
AccB7I CCANNNNNTGG 1 cut(s) 574
AccI GTMKAC 1 cut(s) 488
AccII CGCG 1 cut(s) 942
AciI CCGC 3 cut(s) 940, 1159, 1282
AclWI GGATC 4 cut(s) 178, 191, 356, 726
AcsI RAATTY 5 cut(s) 12, 148, 446, 873, 1151
AcuI CTGAAG 1 cut(s) 581
AfaI GTAC 2 cut(s) 780, 983
AfeI AGCGCT 1 cut(s) 1489
AfiI CCNNNNNNNGG 4 cut(s) 180, 559, 574, 1315
AjnI CCWGG 1 cut(s) 1480
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
AluBI AGCT 9 cut(s) 111, 655, 659, 928, 1036, 1136, 1206, 1223, 1349
AluI AGCT 9 cut(s) 111, 655, 659, 928, 1036, 1136, 1206, 1223, 1349
Alw21I GWGCWC 1 cut(s) 924
Alw26I GTCTC 4 cut(s) 536, 594, 635, 830
AlwI GGATC 4 cut(s) 178, 191, 356, 726
Aor51HI AGCGCT 1 cut(s) 1489
AoxI GGCC 2 cut(s) 267, 1073
ApeKI GCWGC 4 cut(s) 128, 131, 1203, 1504
ApoI RAATTY 5 cut(s) 12, 148, 446, 873, 1151
ArsI GACNNNNNNTTYG 2 cut(s) 665, 697
Asp700I GAANNNNTTC 1 cut(s) 1125
AspLEI GCGC 2 cut(s) 944, 1490
AspS9I GGNCC 6 cut(s) 92, 239, 268, 565, 1074, 1168
AsuC2I CCSGG 2 cut(s) 638, 758
AsuHPI GGTGA 2 cut(s) 469, 1124
AsuII TTCGAA 2 cut(s) 146, 443
AsuNHI GCTAGC 1 cut(s) 655
AvaII GGWCC 4 cut(s) 92, 239, 565, 1168
BamHI GGATCC 1 cut(s) 183
BbsI GAAGAC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 924
BbvCI CCTCAGC 1 cut(s) 1199
BbvI GCAGC 4 cut(s) 115, 118, 1215, 1491
BccI CCATC 6 cut(s) 65, 475, 520, 812, 993, 1153
BciT130I CCWGG 1 cut(s) 1482
BclI TGATCA 4 cut(s) 3, 1252, 1269, 1396
BcnI CCSGG 2 cut(s) 638, 758
BcoDI GTCTC 4 cut(s) 536, 594, 635, 830
BfaI CTAG 2 cut(s) 656, 878
BfoI RGCGCY 1 cut(s) 1491
BfuAI ACCTGC 1 cut(s) 589
BglI GCCNNNNNGGC 2 cut(s) 266, 1513
BisI GCNGC 4 cut(s) 129, 132, 1204, 1505
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 4 cut(s) 130, 133, 1205, 1506
Bme1390I CCNGG 3 cut(s) 638, 758, 1482
Bme18I GGWCC 4 cut(s) 92, 239, 565, 1168
BmgT120I GGNCC 6 cut(s) 92, 239, 268, 565, 1074, 1168
BmiI GGNNCC 5 cut(s) 94, 185, 259, 579, 1170
BmrFI CCNGG 3 cut(s) 638, 758, 1482
BmrI ACTGGG 1 cut(s) 288
BmsI GCATC 4 cut(s) 49, 143, 637, 1018
BmtI GCTAGC 1 cut(s) 659
BmuI ACTGGG 1 cut(s) 288
BpiI GAAGAC 1 cut(s) 135
Bpu10I CCTNAGC 1 cut(s) 1199
Bpu1102I GCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 2 cut(s) 146, 443
BpuEI CTTGAG 1 cut(s) 560
BpuMI CCSGG 2 cut(s) 638, 758
BsaBI GATNNNNATC 1 cut(s) 1395
BsaI GGTCTC 1 cut(s) 594
BsaJI CCNNGG 3 cut(s) 636, 1108, 1511
BsaWI WCCGGW 1 cut(s) 227
Bsc4I CCNNNNNNNGG 4 cut(s) 180, 559, 574, 1315
Bse1I ACTGG 2 cut(s) 294, 1343
Bse3DI GCAATG 1 cut(s) 184
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 1 cut(s) 1482
BseDI CCNNGG 3 cut(s) 636, 1108, 1511
BseGI GGATG 2 cut(s) 292, 431
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 4 cut(s) 180, 559, 574, 1315
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 5 cut(s) 705, 854, 1025, 1213, 1401
BseNI ACTGG 2 cut(s) 294, 1343
BseRI GAGGAG 1 cut(s) 575
BseXI GCAGC 4 cut(s) 115, 118, 1215, 1491
BseYI CCCAGC 1 cut(s) 1140
BsgI GTGCAG 1 cut(s) 318
Bsh1236I CGCG 1 cut(s) 942
Bsh1285I CGRYCG 1 cut(s) 788
BshFI GGCC 2 cut(s) 269, 1075
BsiEI CGRYCG 1 cut(s) 788
BsiHKAI GWGCWC 1 cut(s) 924
BsiSI CCGG 3 cut(s) 228, 638, 757
BslFI GGGAC 1 cut(s) 1154
BslI CCNNNNNNNGG 4 cut(s) 180, 559, 574, 1315
BsmAI GTCTC 4 cut(s) 536, 594, 635, 830
BsmFI GGGAC 1 cut(s) 1154
BsnI GGCC 2 cut(s) 269, 1075
Bso31I GGTCTC 1 cut(s) 594
Bsp119I TTCGAA 2 cut(s) 146, 443
Bsp1286I GDGCHC 1 cut(s) 924
Bsp143I GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
Bsp1720I GCTNAGC 1 cut(s) 651
BspACI CCGC 3 cut(s) 940, 1159, 1282
BspANI GGCC 2 cut(s) 269, 1075
BspCNI CTCAG 5 cut(s) 706, 853, 1024, 1212, 1400
BspFNI CGCG 1 cut(s) 942
BspHI TCATGA 1 cut(s) 523
BspLI GGNNCC 5 cut(s) 94, 185, 259, 579, 1170
BspMI ACCTGC 1 cut(s) 589
BspOI GCTAGC 1 cut(s) 659
BspPI GGATC 4 cut(s) 178, 191, 356, 726
BspQI GCTCTTC 1 cut(s) 912
BspT104I TTCGAA 2 cut(s) 146, 443
BspTNI GGTCTC 1 cut(s) 594
BsrDI GCAATG 1 cut(s) 184
BsrI ACTGG 2 cut(s) 294, 1343
BssECI CCNNGG 3 cut(s) 636, 1108, 1511
BssMI GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
BssT1I CCWWGG 2 cut(s) 1108, 1511
Bst2UI CCWGG 1 cut(s) 1482
Bst4CI ACNGT 4 cut(s) 198, 789, 1048, 1062
Bst6I CTCTTC 1 cut(s) 912
BstAPI GCANNNNNTGC 1 cut(s) 406
BstBI TTCGAA 2 cut(s) 146, 443
BstC8I GCNNGC 1 cut(s) 657
BstDEI CTNAG 7 cut(s) 477, 651, 714, 840, 1011, 1199, 1387
BstF5I GGATG 2 cut(s) 292, 431
BstFNI CGCG 1 cut(s) 942
BstH2I RGCGCY 1 cut(s) 1491
BstHHI GCGC 2 cut(s) 944, 1490
BstKTI GATC 7 cut(s) 6, 186, 364, 721, 1255, 1272, 1399
BstMAI GTCTC 4 cut(s) 536, 594, 635, 830
BstMBI GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
BstMCI CGRYCG 1 cut(s) 788
BstMWI GCNNNNNNNGC 6 cut(s) 266, 406, 656, 1203, 1229, 1513
BstNI CCWGG 1 cut(s) 1482
BstSCI CCNGG 3 cut(s) 636, 756, 1480
BstUI CGCG 1 cut(s) 942
BstV1I GCAGC 4 cut(s) 115, 118, 1215, 1491
BstV2I GAAGAC 1 cut(s) 135
BstX2I RGATCY 1 cut(s) 183
BstYI RGATCY 1 cut(s) 183
BsuRI GGCC 2 cut(s) 269, 1075
BtgZI GCGATG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 292, 431
BtsIMutI CAGTG 3 cut(s) 301, 1199, 1336
BveI ACCTGC 1 cut(s) 589
Cac8I GCNNGC 1 cut(s) 657
CciI TCATGA 1 cut(s) 523
CfoI GCGC 2 cut(s) 944, 1490
Cfr13I GGNCC 6 cut(s) 92, 239, 268, 565, 1074, 1168
Csp6I GTAC 2 cut(s) 779, 982
CviAII CATG 3 cut(s) 524, 775, 1165
CviQI GTAC 2 cut(s) 779, 982
DdeI CTNAG 7 cut(s) 477, 651, 714, 840, 1011, 1199, 1387
DpnI GATC 7 cut(s) 5, 185, 363, 720, 1254, 1271, 1398
DpnII GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
Eam1104I CTCTTC 1 cut(s) 912
EarI CTCTTC 1 cut(s) 912
Eco130I CCWWGG 2 cut(s) 1108, 1511
Eco31I GGTCTC 1 cut(s) 594
Eco47I GGWCC 4 cut(s) 92, 239, 565, 1168
Eco47III AGCGCT 1 cut(s) 1489
Eco57I CTGAAG 1 cut(s) 581
EcoO109I RGGNCCY 2 cut(s) 239, 268
EcoRI GAATTC 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 1480
EcoT14I CCWWGG 2 cut(s) 1108, 1511
EcoT22I ATGCAT 1 cut(s) 64
ErhI CCWWGG 2 cut(s) 1108, 1511
FaeI CATG 3 cut(s) 527, 778, 1168
FaqI GGGAC 1 cut(s) 1154
FatI CATG 3 cut(s) 523, 774, 1164
FbaI TGATCA 4 cut(s) 3, 1252, 1269, 1396
FblI GTMKAC 1 cut(s) 488
Fnu4HI GCNGC 4 cut(s) 129, 132, 1204, 1505
FokI GGATG 2 cut(s) 299, 418
Fsp4HI GCNGC 4 cut(s) 129, 132, 1204, 1505
FspBI CTAG 2 cut(s) 656, 878
GlaI GCGC 2 cut(s) 943, 1489
GluI GCNGC 4 cut(s) 129, 132, 1204, 1505
GsaI CCCAGC 1 cut(s) 1144
HaeII RGCGCY 1 cut(s) 1491
HaeIII GGCC 2 cut(s) 269, 1075
HapII CCGG 3 cut(s) 228, 638, 757
HhaI GCGC 2 cut(s) 944, 1490
Hin1II CATG 3 cut(s) 527, 778, 1168
Hin6I GCGC 2 cut(s) 942, 1488
HinP1I GCGC 2 cut(s) 942, 1488
HinfI GANTC 9 cut(s) 520, 710, 748, 838, 949, 1291, 1333, 1342, 1474
HpaII CCGG 3 cut(s) 228, 638, 757
HphI GGTGA 2 cut(s) 469, 1124
Hpy166II GTNNAC 1 cut(s) 489
Hpy188III TCNNGA 8 cut(s) 168, 255, 322, 524, 539, 1130, 1400, 1432
Hpy8I GTNNAC 1 cut(s) 489
Hpy99I CGWCG 1 cut(s) 370
HpyAV CCTTC 5 cut(s) 379, 526, 907, 965, 1446
HpyCH4III ACNGT 4 cut(s) 198, 789, 1048, 1062
HpyCH4IV ACGT 3 cut(s) 390, 1228, 1470
HpyCH4V TGCA 8 cut(s) 62, 134, 299, 466, 860, 1005, 1164, 1232
HpyF10VI GCNNNNNNNGC 6 cut(s) 266, 406, 656, 1203, 1229, 1513
HpyF3I CTNAG 7 cut(s) 477, 651, 714, 840, 1011, 1199, 1387
HpySE526I ACGT 3 cut(s) 390, 1228, 1470
Hsp92II CATG 3 cut(s) 527, 778, 1168
HspAI GCGC 2 cut(s) 942, 1488
Ksp22I TGATCA 4 cut(s) 3, 1252, 1269, 1396
Kzo9I GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
LguI GCTCTTC 1 cut(s) 912
LmnI GCTCC 1 cut(s) 257
Lsp1109I GCAGC 4 cut(s) 115, 118, 1215, 1491
LweI GCATC 4 cut(s) 49, 143, 637, 1018
MaeI CTAG 2 cut(s) 656, 878
MaeII ACGT 3 cut(s) 390, 1228, 1470
MaeIII GTNAC 2 cut(s) 457, 1334
MalI GATC 7 cut(s) 5, 185, 363, 720, 1254, 1271, 1398
MboI GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
MflI RGATCY 1 cut(s) 183
MhlI GDGCHC 1 cut(s) 924
MlyI GAGTC 3 cut(s) 704, 832, 1342
MmeI TCCRAC 1 cut(s) 555
Mph1103I ATGCAT 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 1125
MseI TTAA 4 cut(s) 81, 105, 620, 740
MspA1I CMGCKG 1 cut(s) 1159
MspI CCGG 3 cut(s) 228, 638, 757
MspR9I CCNGG 3 cut(s) 638, 758, 1482
MvaI CCWGG 1 cut(s) 1482
MvnI CGCG 1 cut(s) 942
MwoI GCNNNNNNNGC 6 cut(s) 266, 406, 656, 1203, 1229, 1513
NciI CCSGG 2 cut(s) 638, 758
NdeII GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
NheI GCTAGC 1 cut(s) 655
NlaIII CATG 3 cut(s) 527, 778, 1168
NlaIV GGNNCC 5 cut(s) 94, 185, 259, 579, 1170
NmeAIII GCCGAG 1 cut(s) 300
NmuCI GTSAC 2 cut(s) 457, 1334
NsiI ATGCAT 1 cut(s) 64
NspV TTCGAA 2 cut(s) 146, 443
PagI TCATGA 1 cut(s) 523
PciSI GCTCTTC 1 cut(s) 912
PdmI GAANNNNTTC 1 cut(s) 1125
PfeI GAWTC 6 cut(s) 520, 748, 949, 1291, 1342, 1474
PflMI CCANNNNNTGG 1 cut(s) 574
PkrI GCNGC 4 cut(s) 130, 133, 1205, 1506
PleI GAGTC 3 cut(s) 704, 832, 1341
PpsI GAGTC 3 cut(s) 704, 832, 1341
PpuMI RGGWCCY 1 cut(s) 239
Psp5II RGGWCCY 1 cut(s) 239
Psp6I CCWGG 1 cut(s) 1480
PspFI CCCAGC 1 cut(s) 1140
PspGI CCWGG 1 cut(s) 1480
PspN4I GGNNCC 5 cut(s) 94, 185, 259, 579, 1170
PspPI GGNCC 6 cut(s) 92, 239, 268, 565, 1074, 1168
PspPPI RGGWCCY 1 cut(s) 239
PsuI RGATCY 1 cut(s) 183
RsaI GTAC 2 cut(s) 780, 983
RsaNI GTAC 2 cut(s) 779, 982
SapI GCTCTTC 1 cut(s) 912
SaqAI TTAA 4 cut(s) 81, 105, 620, 740
SatI GCNGC 4 cut(s) 129, 132, 1204, 1505
Sau3AI GATC 7 cut(s) 3, 183, 361, 718, 1252, 1269, 1396
Sau96I GGNCC 6 cut(s) 92, 239, 268, 565, 1074, 1168
SchI GAGTC 3 cut(s) 704, 832, 1342
ScrFI CCNGG 3 cut(s) 638, 758, 1482
SduI GDGCHC 1 cut(s) 924
SfaNI GCATC 4 cut(s) 49, 143, 637, 1018
SfuI TTCGAA 2 cut(s) 146, 443
SinI GGWCC 4 cut(s) 92, 239, 565, 1168
SmlI CTYRAG 1 cut(s) 539
SmoI CTYRAG 1 cut(s) 539
SsiI CCGC 3 cut(s) 940, 1159, 1282
SspMI CTAG 2 cut(s) 656, 878
StyD4I CCNGG 3 cut(s) 636, 756, 1480
StyI CCWWGG 2 cut(s) 1108, 1511
TaaI ACNGT 4 cut(s) 198, 789, 1048, 1062
TaiI ACGT 3 cut(s) 393, 1231, 1473
TaqI TCGA 6 cut(s) 31, 41, 146, 368, 443, 784
TfiI GAWTC 6 cut(s) 520, 748, 949, 1291, 1342, 1474
Tru1I TTAA 4 cut(s) 81, 105, 620, 740
Tru9I TTAA 4 cut(s) 81, 105, 620, 740
TscAI CASTG 3 cut(s) 301, 1199, 1343
TseFI GTSAC 2 cut(s) 457, 1334
TseI GCWGC 4 cut(s) 128, 131, 1203, 1504
Tsp45I GTSAC 2 cut(s) 457, 1334
TspDTI ATGAA 6 cut(s) 307, 420, 763, 781, 817, 1454
TspGWI ACGGA 3 cut(s) 354, 424, 1169
TspRI CASTG 3 cut(s) 301, 1199, 1343
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 4 cut(s) 92, 239, 565, 1168
XapI RAATTY 5 cut(s) 12, 148, 446, 873, 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 761
XmiI GTMKAC 1 cut(s) 488
XmnI GAANNNNTTC 1 cut(s) 1125
XspI CTAG 2 cut(s) 656, 878
Zsp2I ATGCAT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.