Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
9500271 .. 9505972
5702 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G16890.4

Sequence Viewer

Length: 4314 bp
ATGATGGATACATCCAAAGATGATGATATGGAGATAGCTTCTTCTTCTGGCAGCCGGAGATACGACGTTTTCCCAAGCTTTCGTGGAGAAGATGTCCGTGACTCATTCCTCAGCCATCTTCTCAAGGAGCTCAGGGGCAAAGCAATCACATTCATAGATGATGAGATCGAGAGGAGCCGCTCAATCGGCCCGGAGCTTTTATCGGCAATAAAAGAATCGAGAATAGCAATCGTTATCTTCTCTAAGAACTATGCTTCATCCACCTGGTGCCTGAATGAATTGGTGGAGATTCACAAGTGTTATACGAATTTGAATCAAATGGTGATTCCGATTTTCTTCCACGTTGATGCTTCGGAAGTTAAAAAACAGACCGGCGAATTTGGAAAGGTCTTTGAAGAGACATGCAAGGCTAAATCAGAGGATGAGAAACAAAGTTGGAAGCAAGCTCTAGCAGCTGTTGCAGTTATGGCCGGATATGATCTTCGGAAATGGCCTAGTGAAGCAGCCATGATTGAAGAGCTTGCCGAGGATGTTTTGAGAAAAACTATGACACCATCGGATGATTTTGGCGACTTAGTCGGAATTGAAAATCATATAGAGGCAATAAAATCAGTATTGTGCTTGGAATCCAAGGAAGCTAGAATAATGGTCGGGATTTGGGGACAATCAGGGATTGGTAAGAGTACCATAGGAAGAGCTCTTTACAGTAAACTCTCTATCCAGTTCCACCATCGCGCTTTCATAACATATAAAAGCACCAGCGGTAGTGACGTCTCTGGCATGAAGTTGAGGTGGGAAAAAGAACTTCTCTCGGAAATCTTAGGTCAAAAGGACATAAAGATAGAGCATTTTGGTGTGGTGGAGCAAAGGTTAAAGCAACAGAAAGTTCTTATCCTTCTTGATGATGTGGATAGTCTAGAGTTTCTTAAGACCTTGGTGGGAAAAGCTGAATGGTTTGGATCTGGAAGCAGAATAATTGTGATCACTCAAGATAGGCAACTTCTCAAGGCTCATGAGATTGACCTTATATATGAGGTGGAGTTCCCATCTGAACATCTTGCTCTTACGATGTTATGCCGATCTGCTTTTGGGAAAGACTCTCCACCTGATGATTTTAAGGAACTAGCATTTGAAGTTGCGAAGCTTGCCGGTAATCTTCCGTTGGGTCTTAGTGTCCTTGGTTCGTCTTTAAAGGGAAGGACCAAAGAATGGTGGATGGAGATGATGCCTAGGCTCCGAAATGGTTTGAACGGAGATATTATGAAAACATTAAGAGTCAGCTACGATAGATTACATCAAAAAGATCAAGATATGTTCCTTTACATCGCGTGTTTATTCAATGGTTTTGAAGTCAGTTACGTCAAAGATTTACTTAAAGATAATGTTGGGTTTACAATGTTGACTGAGAAGTCCCTCATACGTATTACACCGGATGGATATATAGAGATGCACAATTTGCTAGAGAAATTGGGTAGAGAAATTGATCGTGCAAAGTCCAAGGGTAATCCTGGAAAACGTCGATTTCTGACGAATTTTGAAGATATTCATGAAGTAGTGACCGAGAAAACTGGGACAGAAACTCTTCTTGGAATACGTTTGCCATTCGAGGAATATTTTTCGACAAGGCCGTTATTAATAGATAAAGAATCGTTCAAAGGCATGCGTAATCTGCAATATCTAGAAATTGGTTATTACGGGGATCTACCTCAGAGCCTCGTTTATTTGCCCCTTAAACTCAGATTGCTAGACTGGGATGATTGTCCATTGAAGTCTTTGCCATCTACTTTTAAGGCGGAATATCTAGTTAACCTCATAATGAAGTATAGTAAGCTTGAGAAACTGTGGGAAGGAACTCTGCCCCTTGGAAGTCTCAAGGAGATGAATTTGAGGTATTCCAACAATTTGAAAGAAATTCCAGATCTTTCTTTAGCCATAAACCTCGAGGAATTAGATCTTGTTGGATGCAAATCTTTGGTGACACTTCCTTCCTCGATTCAGAATGCCACTAAACTGATCTATTTAGATATGAGTGATTGCAAAAAGCTAGAGAGTTTTCCAACCGATCTCAACTTGGAATCTCTCGAGTACCTCAATCTCACTGGATGCCCGAATTTGAGAAACTTTCCAGCAATCAAAATGGGATGTTCAGACGTTGACTTTCCGGAAGGGAGAAATGAGATCGTGGTAGAAGATTGTTTCTGGAACAAGAATCTCCCTGCTGGACTAGATTATCTCGACTGCCTTACGAGATGTATGCCTTGTGAATTTCGCCCAGAACAACTCGCTTTTCTCAATGTGAGGGGCTACAAGCATGAGAAGCTATGGGAAGGCATCCAGTCGCTTGGAAGTCTCGAAGGGATGGATCTGTCAGAATCTGAAAACCTGACAGAAATTCCAGATCTTTCAAAGGCCACCAAGCTCGAGTCTTTGATACTCAACAACTGCAAAAGTTTGGTGACACTTCCTTCTACAATTGGGAATCTTCATAGATTGGTGAGGTTGGAAATGAAAGAATGCACAGGGCTGGAGGTTCTTCCGACCGATGTCAACTTGTCATCTCTCGAAACCCTCGATCTCAGTGGTTGCTCAAGTTTGAGAAGTTTTCCTCTGATTTCAACTAATATTGTATGGCTCTATCTGGAAAACACCGCCATTGAAGAAATTCCTTCTACAATTGGGAATCTTCATAGATTGGTGAGGTTAGAAATGAAAAAATGCACAGGGCTGGAGGTTCTTCCGACCGATGTCAACTTGTCATCTCTCGAAACCCTCGATCTCAGTGGTTGCTCAAGTTTGAGAAGTTTTCCTCTGATTTCAGAGAGTATCAAATGGCTCTATCTGGAAAACACCGCCATTGAAGAAATTCCAGATCTTTCAAAGGCCACTAATCTGAAGAATTTGAAACTCAACAATTGCAAAAGTTTGGTGACACTTCCTACTACTATAGGAAATCTCCAAAAATTGGTGAGCTTTGAAATGAAAGAATGCACAGGGCTGGAGGTTCTTCCGATCGATGTCAACTTGTCATCTCTTATGATCCTCGATCTCAGTGGTTGCTCAAGTCTGAGAACTTTTCCTCTGATTTCAACTAATATTGTATGGCTCTATCTGGAAAACACCGCCATTGAAGAAATCCCTTCTACAATTGGGAATCTTCATAGATTGGTGAAGTTAGAAATGAAAGAATGCACAGGGCTGGAGGTTCTTCCGACCGATGTCAACTTGTCATCTCTTATGATCCTCGATCTCAGTGGTTGCTCAAGTCTGAGAACTTTTCCTCTGATTTCAACTAGAATCGAATGTCTCTATCTGCAAAACACCGCCATTGAAGAAGTTCCCTGCTGCATTGAGGATTTCACGAGGCTCACTGTACTTATGATGTATTGTTGCCAGAGGTTGAAAACCATCTCCCCAAACATTTTCAGACTTACAAGACTTGAGCTCGCCGACTTTACAGACTGTAGAGGTGTCATCAAGGCGTTGAGTGATGCAACTGTGGTAGCGACAATGGAAGACCACGTTTCTTGTGTACCATTATCTGAAAACATTGAATATATCTGGGATAAGTTGTATCGTGTTGCATACCTCCAGGAACATTTTAGCTTCCGTAATTGCTTCAAATTGGATAGAGATGCGCGAGAGCTCATCCTACGATCATGCTTCAAGCCTGTGGCCTTACCAGGTGAAGAAATCCCTAAGTATTTCACGTATCGAGCTTATGGAGATTCCCTAACTGTCATTGTACCTCAGAGCTCTCTTTCTCAAAATTTCTTGCGATTTAAGGCTTGCGTCGTGGTTGAACCTCTCTCCAAGGGCAAGGGTTTTTATCCATTCTTGAAGGTAAACGTTGGCTTCAATGGCAAACAGTATCAGAAATCATTTTCTAAAGATGCAGAACTGGAGCTTTGTAAGACGGATCATCTGTTTTTCTGTTCCTTCAAGTTCCGGTCTGAAGATCTTCCATCTAAATTGAATTTCAACGATGTGGAGTTTAAGTTTTGTTGCTCCAATAGGATCAAAGAATGCGGTGTACGACTCATGTATGTCTCTCAAGAAGAGAACAACCAACAGACTACGAGAAGCGAGAAGCGGATGCGGATGACATCGGGGACATCTGAAGAAGATATCAACTTACCCTATGGCCTAATTGTAGCGGACACAGGATTGGCCGCTCTAAATATGGAGCTTTCGTTAGGGCAGGGAGAACCATCATCATCAACATCTCTAGAGGGGGAAGCTTTGTGTGTTGATTACATGATAACTGAAGAACAAGATAAAGGAATTCCTATCTTGTTTCCTGTTTCTGGTAACTGA

Protein Analysis

1437

Amino Acids

162.71

Weight (kDa)

5.21

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 41 - 211 1.5e-09 NB-ARC domain
WHD_ROQ1 PF23282 278 - 344 7.9e-13 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 445 - 463 8.5e-08 Leucine Rich Repeat
C-JID PF20160 847 - 972 4.5e-13 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1408
AatII GACGTC 1 cut(s) 774
AbsI CCTCGAGG 1 cut(s) 1940
AccB1I GGYRCC 1 cut(s) 267
AccB7I CCANNNNNTGG 2 cut(s) 1209, 2962
AccBSI CCGCTC 2 cut(s) 180, 4172
AccII CGCG 3 cut(s) 735, 1328, 3637
AccIII TCCGGA 1 cut(s) 2161
AclI AACGTT 1 cut(s) 3846
AclWI GGATC 7 cut(s) 967, 1707, 2370, 3031, 3232, 3924, 4022
AcoI YGGCCR 2 cut(s) 468, 4167
AcuI CTGAAG 4 cut(s) 2912, 3972, 4137, 4284
AcyI GRCGYC 1 cut(s) 771
AdeI CACNNNGTG 1 cut(s) 267
AfaI GTAC 6 cut(s) 685, 2087, 3372, 3531, 3744, 4032
AfiI CCNNNNNNNGG 3 cut(s) 1209, 2962, 4304
AflII CTTAAG 1 cut(s) 926
AjnI CCWGG 4 cut(s) 263, 1507, 3588, 3679
AjuI GAANNNNNNNTTGG 2 cut(s) 1569, 1601
Alw21I GWGCWC 5 cut(s) 132, 700, 3444, 3645, 3755
Alw26I GTCTC 6 cut(s) 392, 778, 1874, 2354, 3308, 4051
AlwI GGATC 7 cut(s) 967, 1707, 2370, 3031, 3232, 3924, 4022
AlwNI CAGNNNCTG 1 cut(s) 2375
Ama87I CYCGRG 3 cut(s) 1940, 2081, 2420
Aor13HI TCCGGA 1 cut(s) 2161
AoxI GGCC 9 cut(s) 187, 468, 491, 1625, 2409, 2880, 3672, 4141, 4167
ApeKI GCWGC 4 cut(s) 51, 452, 503, 3342
AseI ATTAAT 1 cut(s) 1634
Asp700I GAANNNNTTC 6 cut(s) 1542, 1581, 2661, 2862, 3333, 3957
AspA2I CCTAGG 1 cut(s) 1229
AspLEI GCGC 2 cut(s) 737, 3637
AspS9I GGNCC 2 cut(s) 188, 1200
AsuC2I CCSGG 1 cut(s) 191
AsuHPI GGTGA 9 cut(s) 334, 1987, 2467, 2506, 2707, 2938, 2977, 3178, 3695
AvaI CYCGRG 3 cut(s) 1940, 2081, 2420
AvaII GGWCC 1 cut(s) 1200
AvrII CCTAGG 1 cut(s) 1229
BanI GGYRCC 1 cut(s) 267
BanII GRGCYC 5 cut(s) 132, 700, 3444, 3645, 3755
BauI CACGAG 1 cut(s) 3358
BbsI GAAGAC 1 cut(s) 3519
Bbv12I GWGCWC 5 cut(s) 132, 700, 3444, 3645, 3755
BbvCI CCTCAGC 1 cut(s) 110
BbvI GCAGC 4 cut(s) 63, 464, 515, 3329
BceAI ACGGC 1 cut(s) 1612
BcgI CGANNNNNNTGC 2 cut(s) 2236, 2270
BciT130I CCWGG 4 cut(s) 265, 1509, 3590, 3681
BclI TGATCA 1 cut(s) 981
BcnI CCSGG 1 cut(s) 191
BcoDI GTCTC 6 cut(s) 392, 778, 1874, 2354, 3308, 4051
BfmI CTRYAG 2 cut(s) 2943, 3460
BfrI CTTAAG 1 cut(s) 926
BglII AGATCT 5 cut(s) 1918, 1951, 2398, 2869, 3955
BisI GCNGC 6 cut(s) 52, 178, 453, 504, 3343, 4170
BlnI CCTAGG 1 cut(s) 1229
BlsI GCNGC 6 cut(s) 53, 179, 454, 505, 3344, 4171
Bme1390I CCNGG 5 cut(s) 191, 265, 1509, 3590, 3681
Bme18I GGWCC 1 cut(s) 1200
BmeT110I CYCGRG 3 cut(s) 1940, 2081, 2420
BmgT120I GGNCC 2 cut(s) 188, 1200
BmiI GGNNCC 3 cut(s) 176, 269, 1235
BmrFI CCNGG 5 cut(s) 191, 265, 1509, 3590, 3681
BmrI ACTGGG 2 cut(s) 1578, 1759
BmuI ACTGGG 2 cut(s) 1578, 1759
BoxI GACNNNNGTC 3 cut(s) 2543, 2744, 3215
BpiI GAAGAC 1 cut(s) 3519
BpmI CTGGAG 6 cut(s) 2546, 2747, 3017, 3218, 3572, 3920
Bpu10I CCTNAGC 2 cut(s) 110, 131
BpuMI CCSGG 1 cut(s) 191
Bsa29I ATCGAT 1 cut(s) 3012
BsaAI YACGTR 2 cut(s) 1421, 3708
BsaBI GATNNNNATC 1 cut(s) 1966
BsaHI GRCGYC 1 cut(s) 771
BsaJI CCNNGG 8 cut(s) 525, 630, 933, 1177, 1229, 1497, 1861, 3810
BsaWI WCCGGW 3 cut(s) 1429, 2161, 3945
BsaXI ACNNNNNCTCC 8 cut(s) 78, 108, 854, 884, 3980, 4010, 4175, 4205
Bsc4I CCNNNNNNNGG 3 cut(s) 1209, 2962, 4304
Bse118I RCCGGY 2 cut(s) 371, 1148
Bse1I ACTGG 6 cut(s) 721, 1573, 1754, 2104, 2335, 3903
Bse8I GATNNNNATC 1 cut(s) 1966
BseAI TCCGGA 1 cut(s) 2161
BseBI CCWGG 4 cut(s) 265, 1509, 3590, 3681
BseCI ATCGAT 1 cut(s) 3012
BseDI CCNNGG 8 cut(s) 525, 630, 933, 1177, 1229, 1497, 1861, 3810
BseJI GATNNNNATC 1 cut(s) 1966
BseLI CCNNNNNNNGG 3 cut(s) 1209, 2962, 4304
BseNI ACTGG 6 cut(s) 721, 1573, 1754, 2104, 2335, 3903
BseRI GAGGAG 1 cut(s) 187
BseXI GCAGC 4 cut(s) 63, 464, 515, 3329
Bsh1236I CGCG 3 cut(s) 735, 1328, 3637
Bsh1285I CGRYCG 4 cut(s) 2541, 2742, 3012, 3213
BshFI GGCC 9 cut(s) 189, 470, 493, 1627, 2411, 2882, 3674, 4143, 4169
BshNI GGYRCC 1 cut(s) 267
BshVI ATCGAT 1 cut(s) 3012
BsiEI CGRYCG 4 cut(s) 2541, 2742, 3012, 3213
BsiHKAI GWGCWC 5 cut(s) 132, 700, 3444, 3645, 3755
BsiHKCI CYCGRG 3 cut(s) 1940, 2081, 2420
BsiSI CCGG 8 cut(s) 55, 191, 372, 471, 1149, 1430, 2162, 3946
BslFI GGGAC 4 cut(s) 675, 1396, 1585, 4123
BslI CCNNNNNNNGG 3 cut(s) 1209, 2962, 4304
BsmAI GTCTC 6 cut(s) 392, 778, 1874, 2354, 3308, 4051
BsmBI CGTCTC 1 cut(s) 778
BsmFI GGGAC 4 cut(s) 675, 1396, 1585, 4123
BsmI GAATGC 5 cut(s) 2005, 2519, 2990, 3191, 4028
BsnI GGCC 9 cut(s) 189, 470, 493, 1627, 2411, 2882, 3674, 4143, 4169
BsoBI CYCGRG 3 cut(s) 1940, 2081, 2420
Bsp1286I GDGCHC 5 cut(s) 132, 700, 3444, 3645, 3755
Bsp13I TCCGGA 1 cut(s) 2161
BspANI GGCC 9 cut(s) 189, 470, 493, 1627, 2411, 2882, 3674, 4143, 4169
BspDI ATCGAT 1 cut(s) 3012
BspEI TCCGGA 1 cut(s) 2161
BspFNI CGCG 3 cut(s) 735, 1328, 3637
BspHI TCATGA 2 cut(s) 1012, 1546
BspLI GGNNCC 3 cut(s) 176, 269, 1235
BspPI GGATC 7 cut(s) 967, 1707, 2370, 3031, 3232, 3924, 4022
BspQI GCTCTTC 2 cut(s) 510, 688
BspT107I GGYRCC 1 cut(s) 267
BspTI CTTAAG 1 cut(s) 926
BsrBI CCGCTC 2 cut(s) 180, 4172
BsrFI RCCGGY 2 cut(s) 371, 1148
BsrI ACTGG 6 cut(s) 721, 1573, 1754, 2104, 2335, 3903
BssAI RCCGGY 2 cut(s) 371, 1148
BssECI CCNNGG 8 cut(s) 525, 630, 933, 1177, 1229, 1497, 1861, 3810
BssNI GRCGYC 1 cut(s) 771
BssSI CACGAG 1 cut(s) 3358
BssT1I CCWWGG 7 cut(s) 630, 933, 1177, 1229, 1497, 1861, 3810
Bst2BI CACGAG 1 cut(s) 3358
Bst2UI CCWGG 4 cut(s) 265, 1509, 3590, 3681
Bst4CI ACNGT 7 cut(s) 707, 1842, 3370, 3461, 3496, 3736, 3867
Bst6I CTCTTC 5 cut(s) 390, 510, 688, 1587, 4050
BstACI GRCGYC 1 cut(s) 771
BstAFI CTTAAG 1 cut(s) 926
BstAPI GCANNNNNTGC 2 cut(s) 458, 1456
BstBAI YACGTR 2 cut(s) 1421, 3708
BstC8I GCNNGC 6 cut(s) 444, 522, 1146, 1661, 3444, 3787
BstFNI CGCG 3 cut(s) 735, 1328, 3637
BstHHI GCGC 2 cut(s) 737, 3637
BstMAI GTCTC 6 cut(s) 392, 778, 1874, 2354, 3308, 4051
BstMCI CGRYCG 4 cut(s) 2541, 2742, 3012, 3213
BstMWI GCNNNNNNNGC 9 cut(s) 186, 452, 458, 467, 1145, 1456, 1669, 2317, 3858
BstNI CCWGG 4 cut(s) 265, 1509, 3590, 3681
BstNSI RCATGY 2 cut(s) 405, 1663
BstPAI GACNNNNGTC 3 cut(s) 2543, 2744, 3215
BstSCI CCNGG 5 cut(s) 189, 263, 1507, 3588, 3679
BstSFI CTRYAG 2 cut(s) 2943, 3460
BstSNI TACGTA 1 cut(s) 1421
BstUI CGCG 3 cut(s) 735, 1328, 3637
BstV1I GCAGC 4 cut(s) 63, 464, 515, 3329
BstV2I GAAGAC 1 cut(s) 3519
BstX2I RGATCY 8 cut(s) 959, 1699, 1918, 1951, 2362, 2398, 2869, 3955
BstXI CCANNNNNNTGG 1 cut(s) 2342
BstYI RGATCY 8 cut(s) 959, 1699, 1918, 1951, 2362, 2398, 2869, 3955
Bsu15I ATCGAT 1 cut(s) 3012
BsuRI GGCC 9 cut(s) 189, 470, 493, 1627, 2411, 2882, 3674, 4143, 4169
BsuTUI ATCGAT 1 cut(s) 3012
BtgZI GCGATG 2 cut(s) 716, 1309
BtsIMutI CAGTG 6 cut(s) 2097, 2584, 2785, 3055, 3256, 3366
Cac8I GCNNGC 6 cut(s) 444, 522, 1146, 1661, 3444, 3787
CaiI CAGNNNCTG 1 cut(s) 2375
CciI TCATGA 2 cut(s) 1012, 1546
CfoI GCGC 2 cut(s) 737, 3637
Cfr10I RCCGGY 2 cut(s) 371, 1148
Cfr13I GGNCC 2 cut(s) 188, 1200
ClaI ATCGAT 1 cut(s) 3012
CseI GACGC 1 cut(s) 3778
CsiI ACCWGGT 2 cut(s) 263, 3679
Csp6I GTAC 6 cut(s) 684, 2086, 3371, 3530, 3743, 4031
CspCI CAANNNNNGTGG 2 cut(s) 3506, 3541
CviQI GTAC 6 cut(s) 684, 2086, 3371, 3530, 3743, 4031
DraI TTTAAA 1 cut(s) 1191
DraIII CACNNNGTG 1 cut(s) 267
DrdI GACNNNNNNGTC 1 cut(s) 1408
DseDI GACNNNNNNGTC 1 cut(s) 1408
EaeI YGGCCR 2 cut(s) 468, 4167
Eam1104I CTCTTC 5 cut(s) 390, 510, 688, 1587, 4050
EarI CTCTTC 5 cut(s) 390, 510, 688, 1587, 4050
EciI GGCGGA 1 cut(s) 1808
Ecl136II GAGCTC 5 cut(s) 130, 698, 3442, 3643, 3753
Eco105I TACGTA 1 cut(s) 1421
Eco130I CCWWGG 7 cut(s) 630, 933, 1177, 1229, 1497, 1861, 3810
Eco24I GRGCYC 5 cut(s) 132, 700, 3444, 3645, 3755
Eco32I GATATC 1 cut(s) 4126
Eco47I GGWCC 1 cut(s) 1200
Eco53kI GAGCTC 5 cut(s) 130, 698, 3442, 3643, 3753
Eco57I CTGAAG 4 cut(s) 2912, 3972, 4137, 4284
Eco88I CYCGRG 3 cut(s) 1940, 2081, 2420
EcoICRI GAGCTC 5 cut(s) 130, 698, 3442, 3643, 3753
EcoRI GAATTC 1 cut(s) 4281
EcoRII CCWGG 4 cut(s) 263, 1507, 3588, 3679
EcoRV GATATC 1 cut(s) 4126
EcoT14I CCWWGG 7 cut(s) 630, 933, 1177, 1229, 1497, 1861, 3810
EcoT38I GRGCYC 5 cut(s) 132, 700, 3444, 3645, 3755
ErhI CCWWGG 7 cut(s) 630, 933, 1177, 1229, 1497, 1861, 3810
Esp3I CGTCTC 1 cut(s) 778
FalI AAGNNNNNCTT 2 cut(s) 1356, 1388
FaqI GGGAC 4 cut(s) 675, 1396, 1585, 4123
FbaI TGATCA 1 cut(s) 981
Fnu4HI GCNGC 6 cut(s) 52, 178, 453, 504, 3343, 4170
FriOI GRGCYC 5 cut(s) 132, 700, 3444, 3645, 3755
Fsp4HI GCNGC 6 cut(s) 52, 178, 453, 504, 3343, 4170
GlaI GCGC 2 cut(s) 736, 3636
GluI GCNGC 6 cut(s) 52, 178, 453, 504, 3343, 4170
GsuI CTGGAG 6 cut(s) 2546, 2747, 3017, 3218, 3572, 3920
HaeIII GGCC 9 cut(s) 189, 470, 493, 1627, 2411, 2882, 3674, 4143, 4169
HapII CCGG 8 cut(s) 55, 191, 372, 471, 1149, 1430, 2162, 3946
HgaI GACGC 1 cut(s) 3778
HhaI GCGC 2 cut(s) 737, 3637
Hin1I GRCGYC 1 cut(s) 771
Hin6I GCGC 2 cut(s) 735, 3635
HinP1I GCGC 2 cut(s) 735, 3635
HincII GTYRAC 7 cut(s) 1401, 1807, 2155, 2548, 2749, 3019, 3220
HindII GTYRAC 7 cut(s) 1401, 1807, 2155, 2548, 2749, 3019, 3220
HindIII AAGCTT 4 cut(s) 76, 1142, 1829, 4236
HpaI GTTAAC 1 cut(s) 1807
HpaII CCGG 8 cut(s) 55, 191, 372, 471, 1149, 1430, 2162, 3946
HphI GGTGA 9 cut(s) 334, 1987, 2467, 2506, 2707, 2938, 2977, 3178, 3695
Hpy99I CGWCG 3 cut(s) 68, 1521, 3794
HpyCH4III ACNGT 7 cut(s) 707, 1842, 3370, 3461, 3496, 3736, 3867
HpyF10VI GCNNNNNNNGC 9 cut(s) 186, 452, 458, 467, 1145, 1456, 1669, 2317, 3858
Hsp92I GRCGYC 1 cut(s) 771
HspAI GCGC 2 cut(s) 735, 3635
Kpn2I TCCGGA 1 cut(s) 2161
Ksp22I TGATCA 1 cut(s) 981
KspAI GTTAAC 1 cut(s) 1807
LguI GCTCTTC 2 cut(s) 510, 688
LmnI GCTCC 8 cut(s) 127, 174, 193, 862, 1239, 3901, 4010, 4183
Lsp1109I GCAGC 4 cut(s) 63, 464, 515, 3329
MabI ACCWGGT 2 cut(s) 263, 3679
MaeIII GTNAC 8 cut(s) 98, 767, 1355, 1555, 1975, 2455, 2926, 4307
MbiI CCGCTC 2 cut(s) 180, 4172
MfeI CAATTG 4 cut(s) 2472, 2673, 2911, 3144
MflI RGATCY 8 cut(s) 959, 1699, 1918, 1951, 2362, 2398, 2869, 3955
MhlI GDGCHC 5 cut(s) 132, 700, 3444, 3645, 3755
MlyI GAGTC 5 cut(s) 95, 1091, 1284, 2432, 4029
MmeI TCCRAC 9 cut(s) 416, 559, 1920, 1939, 2081, 2481, 2561, 2762, 3233
MroI TCCGGA 1 cut(s) 2161
MroXI GAANNNNTTC 6 cut(s) 1542, 1581, 2661, 2862, 3333, 3957
MslI CAYNNNNRTG 2 cut(s) 345, 852
MspA1I CMGCKG 2 cut(s) 455, 762
MspCI CTTAAG 1 cut(s) 926
MspI CCGG 8 cut(s) 55, 191, 372, 471, 1149, 1430, 2162, 3946
MspR9I CCNGG 5 cut(s) 191, 265, 1509, 3590, 3681
MunI CAATTG 4 cut(s) 2472, 2673, 2911, 3144
Mva1269I GAATGC 5 cut(s) 2005, 2519, 2990, 3191, 4028
MvaI CCWGG 4 cut(s) 265, 1509, 3590, 3681
MvnI CGCG 3 cut(s) 735, 1328, 3637
MwoI GCNNNNNNNGC 9 cut(s) 186, 452, 458, 467, 1145, 1456, 1669, 2317, 3858
NciI CCSGG 1 cut(s) 191
NlaIV GGNNCC 3 cut(s) 176, 269, 1235
NmeAIII GCCGAG 1 cut(s) 550
NmuCI GTSAC 6 cut(s) 98, 767, 1555, 1975, 2455, 2926
NspI RCATGY 2 cut(s) 405, 1663
PaeI GCATGC 1 cut(s) 1663
PaeR7I CTCGAG 3 cut(s) 1940, 2081, 2420
PagI TCATGA 2 cut(s) 1012, 1546
PciSI GCTCTTC 2 cut(s) 510, 688
PcsI WCGNNNNNNNCGW 3 cut(s) 1625, 2568, 2769
PctI GAATGC 5 cut(s) 2005, 2519, 2990, 3191, 4028
PdmI GAANNNNTTC 6 cut(s) 1542, 1581, 2661, 2862, 3333, 3957
PflFI GACNNNGTC 1 cut(s) 575
PflMI CCANNNNNTGG 2 cut(s) 1209, 2962
PfoI TCCNGGA 2 cut(s) 1507, 3588
PkrI GCNGC 6 cut(s) 53, 179, 454, 505, 3344, 4171
Ple19I CGATCG 1 cut(s) 3012
PleI GAGTC 5 cut(s) 95, 1091, 1283, 2431, 4029
PpsI GAGTC 5 cut(s) 95, 1091, 1283, 2431, 4029
Ppu21I YACGTR 2 cut(s) 1421, 3708
PshAI GACNNNNGTC 3 cut(s) 2543, 2744, 3215
PshBI ATTAAT 1 cut(s) 1634
Psp124BI GAGCTC 5 cut(s) 132, 700, 3444, 3645, 3755
Psp1406I AACGTT 1 cut(s) 3846
Psp6I CCWGG 4 cut(s) 263, 1507, 3588, 3679
PspGI CCWGG 4 cut(s) 263, 1507, 3588, 3679
PspN4I GGNNCC 3 cut(s) 176, 269, 1235
PspPI GGNCC 2 cut(s) 188, 1200
PspXI VCTCGAGB 2 cut(s) 1940, 2420
PstNI CAGNNNCTG 1 cut(s) 2375
PsuI RGATCY 8 cut(s) 959, 1699, 1918, 1951, 2362, 2398, 2869, 3955
PsyI GACNNNGTC 1 cut(s) 575
PvuI CGATCG 1 cut(s) 3012
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 6 cut(s) 685, 2087, 3372, 3531, 3744, 4032
RsaNI GTAC 6 cut(s) 684, 2086, 3371, 3530, 3743, 4031
RseI CAYNNNNRTG 2 cut(s) 345, 852
SacI GAGCTC 5 cut(s) 132, 700, 3444, 3645, 3755
SapI GCTCTTC 2 cut(s) 510, 688
SatI GCNGC 6 cut(s) 52, 178, 453, 504, 3343, 4170
Sau96I GGNCC 2 cut(s) 188, 1200
SchI GAGTC 5 cut(s) 95, 1091, 1284, 2432, 4029
ScrFI CCNGG 5 cut(s) 191, 265, 1509, 3590, 3681
SduI GDGCHC 5 cut(s) 132, 700, 3444, 3645, 3755
SexAI ACCWGGT 2 cut(s) 263, 3679
SfcI CTRYAG 2 cut(s) 2943, 3460
Sfr274I CTCGAG 3 cut(s) 1940, 2081, 2420
SinI GGWCC 1 cut(s) 1200
SlaI CTCGAG 3 cut(s) 1940, 2081, 2420
SmiMI CAYNNNNRTG 2 cut(s) 345, 852
SnaBI TACGTA 1 cut(s) 1421
SphI GCATGC 1 cut(s) 1663
SspI AATATT 3 cut(s) 1613, 2623, 3094
SstI GAGCTC 5 cut(s) 132, 700, 3444, 3645, 3755
StyD4I CCNGG 5 cut(s) 189, 263, 1507, 3588, 3679
StyI CCWWGG 7 cut(s) 630, 933, 1177, 1229, 1497, 1861, 3810
TaaI ACNGT 7 cut(s) 707, 1842, 3370, 3461, 3496, 3736, 3867
TaqII GACCGA 4 cut(s) 1574, 2555, 2756, 3227
TatI WGTACW 1 cut(s) 3370
TauI GCSGC 2 cut(s) 180, 4172
TscAI CASTG 6 cut(s) 2104, 2584, 2785, 3055, 3256, 3373
TseFI GTSAC 6 cut(s) 98, 767, 1555, 1975, 2455, 2926
TseI GCWGC 4 cut(s) 51, 452, 503, 3342
Tsp45I GTSAC 6 cut(s) 98, 767, 1555, 1975, 2455, 2926
TspGWI ACGGA 5 cut(s) 86, 1149, 1266, 3596, 3929
TspRI CASTG 6 cut(s) 2104, 2584, 2785, 3055, 3256, 3373
Tth111I GACNNNGTC 1 cut(s) 575
Van91I CCANNNNNTGG 2 cut(s) 1209, 2962
Vha464I CTTAAG 1 cut(s) 926
VpaK11BI GGWCC 1 cut(s) 1200
VspI ATTAAT 1 cut(s) 1634
XbaI TCTAGA 3 cut(s) 916, 1678, 4225
XceI RCATGY 2 cut(s) 405, 1663
XhoI CTCGAG 3 cut(s) 1940, 2081, 2420
XmaJI CCTAGG 1 cut(s) 1229
XmnI GAANNNNTTC 6 cut(s) 1542, 1581, 2661, 2862, 3333, 3957
ZraI GACGTC 1 cut(s) 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.