Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 10 - 172 | 1.8e-52 | TIR domain |
| TIR_2 | PF13676 | 11 - 106 | 2.7e-10 | TIR domain |
| NB-ARC | PF00931 | 185 - 354 | 2.8e-10 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 421 - 488 | 7.7e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 591 - 609 | 2e-07 | Leucine Rich Repeat |
| LRR_3 | PF07725 | 728 - 747 | 2.2e-06 | Leucine Rich Repeat |
| LRR_3 | PF07725 | 888 - 907 | 7.6e-07 | Leucine Rich Repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3579 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3414 |
| AatII | GACGTC | 1 cut(s) | 741 |
| AbsI | CCTCGAGG | 2 cut(s) | 1913, 2324 |
| Acc16I | TGCGCA | 1 cut(s) | 471 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2875 |
| AccBSI | CCGCTC | 1 cut(s) | 3773 |
| AccI | GTMKAC | 1 cut(s) | 3896 |
| AccII | CGCG | 1 cut(s) | 702 |
| AccIII | TCCGGA | 1 cut(s) | 2545 |
| AclI | AACGTT | 1 cut(s) | 3547 |
| AclWI | GGATC | 8 cut(s) | 132, 197, 308, 453, 934, 1680, 2754, 3620 |
| AcoI | YGGCCR | 3 cut(s) | 1524, 3742, 3768 |
| AcuI | CTGAAG | 5 cut(s) | 28, 1016, 2825, 3738, 3885 |
| AcvI | CACGTG | 1 cut(s) | 231 |
| AcyI | GRCGYC | 1 cut(s) | 738 |
| AdeI | CACNNNGTG | 1 cut(s) | 234 |
| AfaI | GTAC | 7 cut(s) | 652, 2471, 3158, 3354, 3513, 3630, 3662 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 527, 1019, 1574, 2875 |
| AflII | CTTAAG | 2 cut(s) | 86, 893 |
| AflIII | ACRYGT | 1 cut(s) | 3539 |
| AgeI | ACCGGT | 1 cut(s) | 295 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AjnI | CCWGG | 1 cut(s) | 1474 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 681, 713, 1335, 1367, 1536, 1568 |
| Alw21I | GWGCWC | 1 cut(s) | 667 |
| Alw26I | GTCTC | 5 cut(s) | 745, 1139, 1847, 2738, 3142 |
| AlwI | GGATC | 8 cut(s) | 132, 197, 308, 453, 934, 1680, 2754, 3620 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2759 |
| Ama87I | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| Aor13HI | TCCGGA | 1 cut(s) | 2545 |
| AoxI | GGCC | 6 cut(s) | 458, 1524, 2793, 3063, 3742, 3768 |
| ApeKI | GCWGC | 7 cut(s) | 8, 24, 91, 144, 221, 1009, 3324 |
| AseI | ATTAAT | 1 cut(s) | 2015 |
| AsiGI | ACCGGT | 1 cut(s) | 295 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 57, 1548, 3045, 3882 |
| AspA2I | CCTAGG | 1 cut(s) | 1196 |
| AspLEI | GCGC | 3 cut(s) | 163, 472, 704 |
| AspS9I | GGNCC | 1 cut(s) | 458 |
| AsuC2I | CCSGG | 3 cut(s) | 439, 1574, 1575 |
| AsuII | TTCGAA | 2 cut(s) | 503, 1204 |
| AvaI | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| AvrII | CCTAGG | 1 cut(s) | 1196 |
| BalI | TGGCCA | 1 cut(s) | 3744 |
| BanII | GRGCYC | 1 cut(s) | 667 |
| BauI | CACGAG | 1 cut(s) | 3340 |
| BbrPI | CACGTG | 1 cut(s) | 231 |
| BbsI | GAAGAC | 2 cut(s) | 1115, 2257 |
| Bbv12I | GWGCWC | 1 cut(s) | 667 |
| BbvCI | CCTCAGC | 1 cut(s) | 74 |
| BbvI | GCAGC | 7 cut(s) | 20, 36, 103, 131, 208, 996, 3311 |
| BccI | CCATC | 9 cut(s) | 87, 396, 1021, 1394, 1661, 1759, 2225, 2737, 3688 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 80, 114 |
| BciT130I | CCWGG | 1 cut(s) | 1476 |
| BciVI | GTATCC | 1 cut(s) | 3230 |
| BclI | TGATCA | 1 cut(s) | 948 |
| BcnI | CCSGG | 3 cut(s) | 439, 1574, 1575 |
| BcoDI | GTCTC | 5 cut(s) | 745, 1139, 1847, 2738, 3142 |
| BfmI | CTRYAG | 1 cut(s) | 3442 |
| BfrI | CTTAAG | 2 cut(s) | 86, 893 |
| BfuI | GTATCC | 1 cut(s) | 3230 |
| BglII | AGATCT | 4 cut(s) | 1891, 2302, 2782, 3052 |
| BisI | GCNGC | 9 cut(s) | 6, 9, 25, 92, 145, 222, 1010, 3325, 3771 |
| BlnI | CCTAGG | 1 cut(s) | 1196 |
| BlsI | GCNGC | 9 cut(s) | 7, 10, 26, 93, 146, 223, 1011, 3326, 3772 |
| Bme1390I | CCNGG | 4 cut(s) | 439, 1476, 1574, 1575 |
| BmeT110I | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BmgT120I | GGNCC | 1 cut(s) | 458 |
| BmiI | GGNNCC | 2 cut(s) | 2278, 3347 |
| BmrFI | CCNGG | 4 cut(s) | 439, 1476, 1574, 1575 |
| BmrI | ACTGGG | 1 cut(s) | 1545 |
| BmuI | ACTGGG | 1 cut(s) | 1545 |
| BpiI | GAAGAC | 2 cut(s) | 1115, 2257 |
| BpmI | CTGGAG | 2 cut(s) | 2930, 3200 |
| Bpu10I | CCTNAGC | 1 cut(s) | 74 |
| Bpu14I | TTCGAA | 2 cut(s) | 503, 1204 |
| BpuEI | CTTGAG | 9 cut(s) | 939, 956, 1002, 1826, 1829, 2237, 2240, 2956, 3226 |
| BpuMI | CCSGG | 3 cut(s) | 439, 1574, 1575 |
| BsaAI | YACGTR | 3 cut(s) | 231, 1388, 2078 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1671 |
| BsaHI | GRCGYC | 1 cut(s) | 738 |
| BsaI | GGTCTC | 1 cut(s) | 1139 |
| BsaJI | CCNNGG | 6 cut(s) | 438, 1196, 1464, 1573, 1834, 2355 |
| BsaWI | WCCGGW | 3 cut(s) | 295, 1396, 2545 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3776, 3806 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 527, 1019, 1574, 2875 |
| Bse118I | RCCGGY | 1 cut(s) | 295 |
| Bse1I | ACTGG | 3 cut(s) | 1540, 2488, 2719 |
| Bse3DI | GCAATG | 1 cut(s) | 1290 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1671 |
| BseAI | TCCGGA | 1 cut(s) | 2545 |
| BseBI | CCWGG | 1 cut(s) | 1476 |
| BseDI | CCNNGG | 6 cut(s) | 438, 1196, 1464, 1573, 1834, 2355 |
| BseGI | GGATG | 9 cut(s) | 517, 1405, 2236, 2492, 2531, 2715, 3562, 3699, 3705 |
| BseJI | GATNNNNATC | 1 cut(s) | 1671 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 527, 1019, 1574, 2875 |
| BseMI | GCAATG | 1 cut(s) | 1290 |
| BseNI | ACTGG | 3 cut(s) | 1540, 2488, 2719 |
| BseXI | GCAGC | 7 cut(s) | 20, 36, 103, 131, 208, 996, 3311 |
| BseYI | CCCAGC | 1 cut(s) | 2509 |
| Bsh1236I | CGCG | 1 cut(s) | 702 |
| BshFI | GGCC | 6 cut(s) | 460, 1526, 2795, 3065, 3744, 3770 |
| BshTI | ACCGGT | 1 cut(s) | 295 |
| BsiHKAI | GWGCWC | 1 cut(s) | 667 |
| BsiHKCI | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| BsiSI | CCGG | 5 cut(s) | 296, 438, 1397, 1574, 2546 |
| BslFI | GGGAC | 5 cut(s) | 642, 1181, 1363, 1552, 3724 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 527, 1019, 1574, 2875 |
| BsmAI | GTCTC | 5 cut(s) | 745, 1139, 1847, 2738, 3142 |
| BsmBI | CGTCTC | 2 cut(s) | 745, 3142 |
| BsmFI | GGGAC | 5 cut(s) | 642, 1181, 1363, 1552, 3724 |
| BsmI | GAATGC | 6 cut(s) | 1940, 1978, 2161, 2389, 2903, 3626 |
| BsnI | GGCC | 6 cut(s) | 460, 1526, 2795, 3065, 3744, 3770 |
| Bso31I | GGTCTC | 1 cut(s) | 1139 |
| BsoBI | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| Bsp119I | TTCGAA | 2 cut(s) | 503, 1204 |
| Bsp1286I | GDGCHC | 1 cut(s) | 667 |
| Bsp13I | TCCGGA | 1 cut(s) | 2545 |
| Bsp1407I | TGTACA | 1 cut(s) | 3156 |
| BspANI | GGCC | 6 cut(s) | 460, 1526, 2795, 3065, 3744, 3770 |
| BspEI | TCCGGA | 1 cut(s) | 2545 |
| BspFNI | CGCG | 1 cut(s) | 702 |
| BspHI | TCATGA | 1 cut(s) | 979 |
| BspLI | GGNNCC | 2 cut(s) | 2278, 3347 |
| BspPI | GGATC | 8 cut(s) | 132, 197, 308, 453, 934, 1680, 2754, 3620 |
| BspQI | GCTCTTC | 2 cut(s) | 655, 1035 |
| BspT104I | TTCGAA | 2 cut(s) | 503, 1204 |
| BspTI | CTTAAG | 2 cut(s) | 86, 893 |
| BspTNI | GGTCTC | 1 cut(s) | 1139 |
| BsrBI | CCGCTC | 1 cut(s) | 3773 |
| BsrDI | GCAATG | 1 cut(s) | 1290 |
| BsrFI | RCCGGY | 1 cut(s) | 295 |
| BsrGI | TGTACA | 1 cut(s) | 3156 |
| BsrI | ACTGG | 3 cut(s) | 1540, 2488, 2719 |
| BssAI | RCCGGY | 1 cut(s) | 295 |
| BssECI | CCNNGG | 6 cut(s) | 438, 1196, 1464, 1573, 1834, 2355 |
| BssNI | GRCGYC | 1 cut(s) | 738 |
| BssSI | CACGAG | 1 cut(s) | 3340 |
| BssT1I | CCWWGG | 4 cut(s) | 1196, 1464, 1834, 2355 |
| Bst2BI | CACGAG | 1 cut(s) | 3340 |
| Bst2UI | CCWGG | 1 cut(s) | 1476 |
| Bst4CI | ACNGT | 5 cut(s) | 585, 633, 1815, 3443, 3478 |
| Bst6I | CTCTTC | 3 cut(s) | 655, 1035, 2733 |
| BstACI | GRCGYC | 1 cut(s) | 738 |
| BstAFI | CTTAAG | 2 cut(s) | 86, 893 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1423 |
| BstAUI | TGTACA | 1 cut(s) | 3156 |
| BstBAI | YACGTR | 3 cut(s) | 231, 1388, 2078 |
| BstBI | TTCGAA | 2 cut(s) | 503, 1204 |
| BstC8I | GCNNGC | 2 cut(s) | 1113, 1628 |
| BstF5I | GGATG | 9 cut(s) | 517, 1405, 2236, 2492, 2531, 2715, 3562, 3699, 3705 |
| BstFNI | CGCG | 1 cut(s) | 702 |
| BstHHI | GCGC | 3 cut(s) | 163, 472, 704 |
| BstMAI | GTCTC | 5 cut(s) | 745, 1139, 1847, 2738, 3142 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1112, 1423, 2094, 2701 |
| BstNI | CCWGG | 1 cut(s) | 1476 |
| BstNSI | RCATGY | 5 cut(s) | 372, 1299, 1630, 2044, 3543 |
| BstSCI | CCNGG | 4 cut(s) | 437, 1474, 1572, 1573 |
| BstSFI | CTRYAG | 1 cut(s) | 3442 |
| BstSNI | TACGTA | 1 cut(s) | 1388 |
| BstUI | CGCG | 1 cut(s) | 702 |
| BstV1I | GCAGC | 7 cut(s) | 20, 36, 103, 131, 208, 996, 3311 |
| BstV2I | GAAGAC | 2 cut(s) | 1115, 2257 |
| BstX2I | RGATCY | 9 cut(s) | 189, 445, 926, 1672, 1891, 2302, 2746, 2782, 3052 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2726 |
| BstYI | RGATCY | 9 cut(s) | 189, 445, 926, 1672, 1891, 2302, 2746, 2782, 3052 |
| BsuI | GTATCC | 1 cut(s) | 3230 |
| BsuRI | GGCC | 6 cut(s) | 460, 1526, 2795, 3065, 3744, 3770 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 9 cut(s) | 517, 1405, 2236, 2492, 2531, 2715, 3562, 3699, 3705 |
| BtsIMutI | CAGTG | 5 cut(s) | 52, 1144, 2481, 2968, 3238 |
| Cac8I | GCNNGC | 2 cut(s) | 1113, 1628 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2759 |
| CciI | TCATGA | 1 cut(s) | 979 |
| CfoI | GCGC | 3 cut(s) | 163, 472, 704 |
| Cfr10I | RCCGGY | 1 cut(s) | 295 |
| Cfr13I | GGNCC | 1 cut(s) | 458 |
| Cfr9I | CCCGGG | 1 cut(s) | 1573 |
| Csp6I | GTAC | 7 cut(s) | 651, 2470, 3157, 3353, 3512, 3629, 3661 |
| CspAI | ACCGGT | 1 cut(s) | 295 |
| CviQI | GTAC | 7 cut(s) | 651, 2470, 3157, 3353, 3512, 3629, 3661 |
| DraI | TTTAAA | 5 cut(s) | 361, 1315, 1879, 2025, 3592 |
| DraIII | CACNNNGTG | 1 cut(s) | 234 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3414 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3414 |
| EaeI | YGGCCR | 3 cut(s) | 1524, 3742, 3768 |
| Eam1104I | CTCTTC | 3 cut(s) | 655, 1035, 2733 |
| EarI | CTCTTC | 3 cut(s) | 655, 1035, 2733 |
| EciI | GGCGGA | 2 cut(s) | 510, 1781 |
| Ecl136II | GAGCTC | 1 cut(s) | 665 |
| Eco105I | TACGTA | 1 cut(s) | 1388 |
| Eco130I | CCWWGG | 4 cut(s) | 1196, 1464, 1834, 2355 |
| Eco24I | GRGCYC | 1 cut(s) | 667 |
| Eco31I | GGTCTC | 1 cut(s) | 1139 |
| Eco32I | GATATC | 2 cut(s) | 1041, 1580 |
| Eco53kI | GAGCTC | 1 cut(s) | 665 |
| Eco57I | CTGAAG | 5 cut(s) | 28, 1016, 2825, 3738, 3885 |
| Eco72I | CACGTG | 1 cut(s) | 231 |
| Eco88I | CYCGRG | 5 cut(s) | 1573, 1913, 2324, 2465, 3074 |
| EcoICRI | GAGCTC | 1 cut(s) | 665 |
| EcoRII | CCWGG | 1 cut(s) | 1474 |
| EcoRV | GATATC | 2 cut(s) | 1041, 1580 |
| EcoT14I | CCWWGG | 4 cut(s) | 1196, 1464, 1834, 2355 |
| EcoT38I | GRGCYC | 1 cut(s) | 667 |
| ErhI | CCWWGG | 4 cut(s) | 1196, 1464, 1834, 2355 |
| Esp3I | CGTCTC | 2 cut(s) | 745, 3142 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1323, 1355, 3572, 3604 |
| FaqI | GGGAC | 5 cut(s) | 642, 1181, 1363, 1552, 3724 |
| FauNDI | CATATG | 1 cut(s) | 474 |
| FbaI | TGATCA | 1 cut(s) | 948 |
| FblI | GTMKAC | 1 cut(s) | 3896 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 9, 25, 92, 145, 222, 1010, 3325, 3771 |
| FokI | GGATG | 9 cut(s) | 504, 1412, 2243, 2499, 2538, 2702, 3569, 3706, 3712 |
| FriOI | GRGCYC | 1 cut(s) | 667 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 9, 25, 92, 145, 222, 1010, 3325, 3771 |
| FspAI | RTGCGCAY | 1 cut(s) | 471 |
| FspI | TGCGCA | 1 cut(s) | 471 |
| GlaI | GCGC | 3 cut(s) | 162, 471, 703 |
| GluI | GCNGC | 9 cut(s) | 6, 9, 25, 92, 145, 222, 1010, 3325, 3771 |
| GsaI | CCCAGC | 1 cut(s) | 2513 |
| GsuI | CTGGAG | 2 cut(s) | 2930, 3200 |
| HaeIII | GGCC | 6 cut(s) | 460, 1526, 2795, 3065, 3744, 3770 |
| HapII | CCGG | 5 cut(s) | 296, 438, 1397, 1574, 2546 |
| HhaI | GCGC | 3 cut(s) | 163, 472, 704 |
| Hin1I | GRCGYC | 1 cut(s) | 738 |
| Hin6I | GCGC | 3 cut(s) | 161, 470, 702 |
| HinP1I | GCGC | 3 cut(s) | 161, 470, 702 |
| HincII | GTYRAC | 4 cut(s) | 677, 2539, 2932, 3202 |
| HindII | GTYRAC | 4 cut(s) | 677, 2539, 2932, 3202 |
| HindIII | AAGCTT | 3 cut(s) | 40, 1802, 3837 |
| HpaII | CCGG | 5 cut(s) | 296, 438, 1397, 1574, 2546 |
| Hpy99I | CGWCG | 1 cut(s) | 311 |
| HpyCH4III | ACNGT | 5 cut(s) | 585, 633, 1815, 3443, 3478 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1112, 1423, 2094, 2701 |
| Hsp92I | GRCGYC | 1 cut(s) | 738 |
| HspAI | GCGC | 3 cut(s) | 161, 470, 702 |
| Kpn2I | TCCGGA | 1 cut(s) | 2545 |
| Ksp22I | TGATCA | 1 cut(s) | 948 |
| LguI | GCTCTTC | 2 cut(s) | 655, 1035 |
| LmnI | GCTCC | 4 cut(s) | 829, 3351, 3608, 3784 |
| Lsp1109I | GCAGC | 7 cut(s) | 20, 36, 103, 131, 208, 996, 3311 |
| MbiI | CCGCTC | 1 cut(s) | 3773 |
| MfeI | CAATTG | 3 cut(s) | 195, 262, 3126 |
| MflI | RGATCY | 9 cut(s) | 189, 445, 926, 1672, 1891, 2302, 2746, 2782, 3052 |
| MhlI | GDGCHC | 1 cut(s) | 667 |
| MlsI | TGGCCA | 1 cut(s) | 3744 |
| MluNI | TGGCCA | 1 cut(s) | 3744 |
| MlyI | GAGTC | 7 cut(s) | 1058, 1205, 1251, 2247, 3086, 3627, 3752 |
| MmeI | TCCRAC | 5 cut(s) | 526, 2465, 2865, 2945, 3215 |
| Mox20I | TGGCCA | 1 cut(s) | 3744 |
| MroI | TCCGGA | 1 cut(s) | 2545 |
| MroXI | GAANNNNTTC | 4 cut(s) | 57, 1548, 3045, 3882 |
| MscI | TGGCCA | 1 cut(s) | 3744 |
| MslI | CAYNNNNRTG | 1 cut(s) | 819 |
| Msp20I | TGGCCA | 1 cut(s) | 3744 |
| MspA1I | CMGCKG | 1 cut(s) | 729 |
| MspCI | CTTAAG | 2 cut(s) | 86, 893 |
| MspI | CCGG | 5 cut(s) | 296, 438, 1397, 1574, 2546 |
| MspR9I | CCNGG | 4 cut(s) | 439, 1476, 1574, 1575 |
| MunI | CAATTG | 3 cut(s) | 195, 262, 3126 |
| Mva1269I | GAATGC | 6 cut(s) | 1940, 1978, 2161, 2389, 2903, 3626 |
| MvaI | CCWGG | 1 cut(s) | 1476 |
| MvnI | CGCG | 1 cut(s) | 702 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1112, 1423, 2094, 2701 |
| NciI | CCSGG | 3 cut(s) | 439, 1574, 1575 |
| NdeI | CATATG | 1 cut(s) | 474 |
| NlaIV | GGNNCC | 2 cut(s) | 2278, 3347 |
| NmeAIII | GCCGAG | 2 cut(s) | 1132, 1552 |
| NmuCI | GTSAC | 7 cut(s) | 536, 734, 1948, 2210, 2359, 2839, 3109 |
| NsbI | TGCGCA | 1 cut(s) | 471 |
| NspI | RCATGY | 5 cut(s) | 372, 1299, 1630, 2044, 3543 |
| NspV | TTCGAA | 2 cut(s) | 503, 1204 |
| PaeI | GCATGC | 1 cut(s) | 1630 |
| PaeR7I | CTCGAG | 4 cut(s) | 1913, 2324, 2465, 3074 |
| PagI | TCATGA | 1 cut(s) | 979 |
| PciI | ACATGT | 1 cut(s) | 3539 |
| PciSI | GCTCTTC | 2 cut(s) | 655, 1035 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1592, 2952 |
| PctI | GAATGC | 6 cut(s) | 1940, 1978, 2161, 2389, 2903, 3626 |
| PdmI | GAANNNNTTC | 4 cut(s) | 57, 1548, 3045, 3882 |
| PflFI | GACNNNGTC | 2 cut(s) | 542, 1591 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2875 |
| PfoI | TCCNGGA | 1 cut(s) | 1474 |
| PinAI | ACCGGT | 1 cut(s) | 295 |
| PkrI | GCNGC | 9 cut(s) | 7, 10, 26, 93, 146, 223, 1011, 3326, 3772 |
| PleI | GAGTC | 7 cut(s) | 1058, 1205, 1250, 2247, 3085, 3627, 3752 |
| PmaCI | CACGTG | 1 cut(s) | 231 |
| PmlI | CACGTG | 1 cut(s) | 231 |
| PpsI | GAGTC | 7 cut(s) | 1058, 1205, 1250, 2247, 3085, 3627, 3752 |
| Ppu21I | YACGTR | 3 cut(s) | 231, 1388, 2078 |
| PscI | ACATGT | 1 cut(s) | 3539 |
| PshBI | ATTAAT | 1 cut(s) | 2015 |
| PsiI | TTATAA | 1 cut(s) | 3579 |
| Psp124BI | GAGCTC | 1 cut(s) | 667 |
| Psp1406I | AACGTT | 1 cut(s) | 3547 |
| Psp6I | CCWGG | 1 cut(s) | 1474 |
| PspCI | CACGTG | 1 cut(s) | 231 |
| PspFI | CCCAGC | 1 cut(s) | 2509 |
| PspGI | CCWGG | 1 cut(s) | 1474 |
| PspN4I | GGNNCC | 2 cut(s) | 2278, 3347 |
| PspPI | GGNCC | 1 cut(s) | 458 |
| PspXI | VCTCGAGB | 3 cut(s) | 1913, 2324, 3074 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2759 |
| PsuI | RGATCY | 9 cut(s) | 189, 445, 926, 1672, 1891, 2302, 2746, 2782, 3052 |
| PsyI | GACNNNGTC | 2 cut(s) | 542, 1591 |
| RsaI | GTAC | 7 cut(s) | 652, 2471, 3158, 3354, 3513, 3630, 3662 |
| RsaNI | GTAC | 7 cut(s) | 651, 2470, 3157, 3353, 3512, 3629, 3661 |
| RseI | CAYNNNNRTG | 1 cut(s) | 819 |
| SacI | GAGCTC | 1 cut(s) | 667 |
| SapI | GCTCTTC | 2 cut(s) | 655, 1035 |
| SatI | GCNGC | 9 cut(s) | 6, 9, 25, 92, 145, 222, 1010, 3325, 3771 |
| Sau96I | GGNCC | 1 cut(s) | 458 |
| SchI | GAGTC | 7 cut(s) | 1058, 1205, 1251, 2247, 3086, 3627, 3752 |
| ScrFI | CCNGG | 4 cut(s) | 439, 1476, 1574, 1575 |
| SduI | GDGCHC | 1 cut(s) | 667 |
| SfcI | CTRYAG | 1 cut(s) | 3442 |
| Sfr274I | CTCGAG | 4 cut(s) | 1913, 2324, 2465, 3074 |
| SfuI | TTCGAA | 2 cut(s) | 503, 1204 |
| SlaI | CTCGAG | 4 cut(s) | 1913, 2324, 2465, 3074 |
| SmaI | CCCGGG | 1 cut(s) | 1575 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 819 |
| SnaBI | TACGTA | 1 cut(s) | 1388 |
| SphI | GCATGC | 1 cut(s) | 1630 |
| SspI | AATATT | 5 cut(s) | 275, 433, 1874, 2285, 3277 |
| SstI | GAGCTC | 1 cut(s) | 667 |
| StyD4I | CCNGG | 4 cut(s) | 437, 1474, 1572, 1573 |
| StyI | CCWWGG | 4 cut(s) | 1196, 1464, 1834, 2355 |
| TaaI | ACNGT | 5 cut(s) | 585, 633, 1815, 3443, 3478 |
| TatI | WGTACW | 3 cut(s) | 3156, 3352, 3660 |
| TauI | GCSGC | 2 cut(s) | 8, 3773 |
| TscAI | CASTG | 5 cut(s) | 52, 1144, 2488, 2968, 3238 |
| TseFI | GTSAC | 7 cut(s) | 536, 734, 1948, 2210, 2359, 2839, 3109 |
| TseI | GCWGC | 7 cut(s) | 8, 24, 91, 144, 221, 1009, 3324 |
| Tsp45I | GTSAC | 7 cut(s) | 536, 734, 1948, 2210, 2359, 2839, 3109 |
| TspGWI | ACGGA | 2 cut(s) | 1725, 3338 |
| TspMI | CCCGGG | 1 cut(s) | 1573 |
| TspRI | CASTG | 5 cut(s) | 52, 1144, 2488, 2968, 3238 |
| Tth111I | GACNNNGTC | 2 cut(s) | 542, 1591 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2875 |
| Vha464I | CTTAAG | 2 cut(s) | 86, 893 |
| VspI | ATTAAT | 1 cut(s) | 2015 |
| XbaI | TCTAGA | 4 cut(s) | 883, 1645, 3049, 3826 |
| XceI | RCATGY | 5 cut(s) | 372, 1299, 1630, 2044, 3543 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1052 |
| XhoI | CTCGAG | 4 cut(s) | 1913, 2324, 2465, 3074 |
| XmaI | CCCGGG | 1 cut(s) | 1573 |
| XmaJI | CCTAGG | 1 cut(s) | 1196 |
| XmiI | GTMKAC | 1 cut(s) | 3896 |
| XmnI | GAANNNNTTC | 4 cut(s) | 57, 1548, 3045, 3882 |
| ZraI | GACGTC | 1 cut(s) | 739 |