AT4G22010

L-ascorbate oxidase homolog

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
11663186 .. 11666716
3531 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G22010.1

Sequence Viewer

Length: 1626 bp
ATGAGAGGTTCTTGCAAAGTCTCTATAGTTCTTCTTCTGGTTTTAATCAATGGTGTGCTTGGAGATAACCCTTATAGATTCTTCACCTGGAAAATTACTTATGGCGACATTTATCCCCTTGGTGTTAAACAACAGGGAATATTGATAAATGGGCAGTTTCCTGGACCTCACATTGACGCAATCACAAATGATAATATCATTATCAGTGTTTTCAATTACTTGAAAGAGCCTTTTCTCATTTCTTGGAACGGAGTGCAACAGAGGAAGAACTCATGGCAAGATGGAGTCGTAGGGACAACATGTCCGATTCCACCAGGCAAAAACTTCACTTATGTAATTCAAGTCAAAGATCAAATTGGTAGCTTCTACTATTTCCCTTCTCTTGCCTTCCACAAAGCCGCTGGTGCATTTGGAGCCATCCGTGTCTGGAGTCGTCCTCGCATCCCTGTCCCGTTCTCTCCCCCTGACGGTGATTTCTGGCTTCTCGCCGGAGATTGGTACAAAACCAATCACTATGTTTTGAGACGTCTACTAGAAGCCGGAAGGAATCTACCGAATCCTGATGGAGTTCTCATCAATGGTCGCGGCTGGGGAGGCAATACCTTCACCGTTCAACCCGGTAAGACCTATAGATTCAGAATATCAAACGTTGGGGTCGCGACTTCATTAAACTTCAGAATCCAAGGACACACGATGAAGCTCGTTGAAGTAGAAGGCTCTCACACTGTTCAAAACATCTACACTTCACTTGACATTCATTTAGGACAGTCTTACTCTGTTCTTGTGACGGCTAACCAAGCTCCTCAAGACTATTACATCGTCATCTCCTCGAGGTTCACGCGGAAAGTCCTTACAACGACTTCGATTCTCCATTACAGTAACTCGAGAAAAGGCGTATCTGGCCCTGTTCCAAATGGTCCTACTTTGGACATCGCATCTTCACTCTACCAAGCTCGAACTATCCGGAGAAATCTTACAGCGAGTGGTCCGAGACCGAATCCGCAAGGCTCGTATCATTACGGTTTGATCAAACCAGGCCGTACGATCATACTCGCCAACTCAGCTCCTTGGATCAACGGCAAGCAAAGGTACGCCGTGAACGGTGCCTCGTTTGTTGCGCCTGACACACCATTGAAGCTCGCCGATTACTTCAAGATTCCCGGAGTTTTTAACCTCGGAAGCATCCCAACGAGTCCCTCTGGTGGAAACGGAGGGTATCTTCAAAGCTCTGTTATGGCCGCTAACTTTAGAGAATTCATCGAGGTTGTTTTCCAAAACTGGGAAAATTCAGTCCAGTCTTGGCACGTCTCCGGTTACTCTTTCTTCGTCGTCGGTATGGATGGAGGACAATGGACTCCCGGAAGCCGAGCAAAGTACAACCTGCGGGACGCGGTTTCACGGTCCACCGTTCAAGTATATCCGAGGGCATGGACAGCGATCTACATAGCGTTGGATAATGTTGGGATGTGGAACATAAGGTCGGAGAATTGGGCAAGACAGTATTTGGGGCAACAATTCTATCTTCGAGTTTACACTTCCTCTACTTCGTACCGAGATGAATATCCACCACCAAAGAACGCTCTTATGTGCGGACGAGCTAAAGGCCGCCACACTAGGCCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

541

Amino Acids

60.46

Weight (kDa)

9.9

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 32 - 145 7e-39 Multicopper oxidase
Cu-oxidase PF00394 158 - 295 5.2e-45 Multicopper oxidase
Cu-oxidase_2 PF07731 376 - 513 6e-31 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 529
AbsI CCTCGAGG 1 cut(s) 829
Acc36I ACCTGC 1 cut(s) 1389
AccB1I GGYRCC 1 cut(s) 1103
AccI GTMKAC 1 cut(s) 529
AccII CGCG 4 cut(s) 585, 659, 841, 1391
AccIII TCCGGA 1 cut(s) 963
AciI CCGC 9 cut(s) 399, 585, 841, 1001, 1239, 1384, 1391, 1590, 1606
AclI AACGTT 1 cut(s) 648
AclWI GGATC 1 cut(s) 1079
AcoI YGGCCR 1 cut(s) 1236
AcsI RAATTY 2 cut(s) 1253, 1285
AcuI CTGAAG 1 cut(s) 658
AcyI GRCGYC 1 cut(s) 526
AfaI GTAC 5 cut(s) 500, 1042, 1091, 1376, 1550
AfiI CCNNNNNNNGG 4 cut(s) 467, 495, 1202, 1279
AflIII ACRYGT 1 cut(s) 299
AhdI GACNNNNNGTC 1 cut(s) 300
AjiI CACGTC 1 cut(s) 1306
AjnI CCWGG 4 cut(s) 86, 160, 313, 1033
AluBI AGCT 8 cut(s) 363, 700, 800, 953, 1064, 1138, 1227, 1598
AluI AGCT 8 cut(s) 363, 700, 800, 953, 1064, 1138, 1227, 1598
Alw26I GTCTC 4 cut(s) 25, 517, 985, 1312
AlwI GGATC 1 cut(s) 1079
Ama87I CYCGRG 2 cut(s) 829, 883
Aor13HI TCCGGA 1 cut(s) 963
AoxI GGCC 5 cut(s) 901, 1036, 1236, 1603, 1616
ApoI RAATTY 2 cut(s) 1253, 1285
AspLEI GCGC 1 cut(s) 1120
AspS9I GGNCC 5 cut(s) 164, 902, 917, 986, 1401
AsuC2I CCSGG 3 cut(s) 618, 1161, 1359
AsuHPI GGTGA 3 cut(s) 76, 482, 598
AvaI CYCGRG 2 cut(s) 829, 883
AvaII GGWCC 4 cut(s) 164, 917, 986, 1401
BanI GGYRCC 1 cut(s) 1103
BccI CCATC 4 cut(s) 275, 425, 557, 1334
BceAI ACGGC 4 cut(s) 804, 1023, 1079, 1093
BciT130I CCWGG 4 cut(s) 88, 162, 315, 1035
BclI TGATCA 1 cut(s) 1026
BcnI CCSGG 3 cut(s) 618, 1161, 1359
BcoDI GTCTC 4 cut(s) 25, 517, 985, 1312
BfaI CTAG 2 cut(s) 533, 1614
BfmI CTRYAG 2 cut(s) 24, 628
BfuAI ACCTGC 1 cut(s) 1389
BisI GCNGC 4 cut(s) 399, 586, 1239, 1606
BlsI GCNGC 4 cut(s) 400, 587, 1240, 1607
Bme1390I CCNGG 7 cut(s) 88, 162, 315, 618, 1035, 1161, 1359
Bme18I GGWCC 4 cut(s) 164, 917, 986, 1401
BmeRI GACNNNNNGTC 1 cut(s) 300
BmeT110I CYCGRG 2 cut(s) 829, 883
BmgBI CACGTC 1 cut(s) 1306
BmgT120I GGNCC 5 cut(s) 164, 902, 917, 986, 1401
BmiI GGNNCC 2 cut(s) 415, 1105
BmrFI CCNGG 7 cut(s) 88, 162, 315, 618, 1035, 1161, 1359
BmrI ACTGGG 1 cut(s) 1288
BmsI GCATC 3 cut(s) 450, 944, 1191
BmuI ACTGGG 1 cut(s) 1288
BplI GAGNNNNNCTC 2 cut(s) 421, 453
BpmI CTGGAG 1 cut(s) 448
BpuEI CTTGAG 1 cut(s) 789
BpuMI CCSGG 3 cut(s) 618, 1161, 1359
BsaBI GATNNNNATC 1 cut(s) 1560
BsaHI GRCGYC 1 cut(s) 526
BsaI GGTCTC 1 cut(s) 985
BsaJI CCNNGG 5 cut(s) 118, 682, 1067, 1174, 1421
BsaWI WCCGGW 2 cut(s) 963, 1310
Bsc4I CCNNNNNNNGG 4 cut(s) 467, 495, 1202, 1279
Bse1I ACTGG 2 cut(s) 1283, 1294
Bse8I GATNNNNATC 1 cut(s) 1560
BseAI TCCGGA 1 cut(s) 963
BseBI CCWGG 4 cut(s) 88, 162, 315, 1035
BseDI CCNNGG 5 cut(s) 118, 682, 1067, 1174, 1421
BseGI GGATG 5 cut(s) 417, 441, 1182, 1345, 1470
BseJI GATNNNNATC 1 cut(s) 1560
BseLI CCNNNNNNNGG 4 cut(s) 467, 495, 1202, 1279
BseMII CTCAG 1 cut(s) 1074
BseNI ACTGG 2 cut(s) 1283, 1294
BseRI GAGGAG 2 cut(s) 792, 817
BseYI CCCAGC 1 cut(s) 588
Bsh1236I CGCG 4 cut(s) 585, 659, 841, 1391
BshFI GGCC 5 cut(s) 903, 1038, 1238, 1605, 1618
BshNI GGYRCC 1 cut(s) 1103
BsiHKCI CYCGRG 2 cut(s) 829, 883
BsiSI CCGG 7 cut(s) 489, 540, 618, 964, 1161, 1311, 1359
BsiWI CGTACG 1 cut(s) 1040
BslFI GGGAC 4 cut(s) 307, 434, 1179, 1400
BslI CCNNNNNNNGG 4 cut(s) 467, 495, 1202, 1279
BsmAI GTCTC 4 cut(s) 25, 517, 985, 1312
BsmBI CGTCTC 2 cut(s) 517, 1312
BsmFI GGGAC 4 cut(s) 307, 434, 1179, 1400
BsnI GGCC 5 cut(s) 903, 1038, 1238, 1605, 1618
Bso31I GGTCTC 1 cut(s) 985
BsoBI CYCGRG 2 cut(s) 829, 883
Bsp13I TCCGGA 1 cut(s) 963
Bsp143I GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
Bsp68I TCGCGA 1 cut(s) 659
BspACI CCGC 9 cut(s) 399, 585, 841, 1001, 1239, 1384, 1391, 1590, 1606
BspANI GGCC 5 cut(s) 903, 1038, 1238, 1605, 1618
BspCNI CTCAG 1 cut(s) 1073
BspEI TCCGGA 1 cut(s) 963
BspFNI CGCG 4 cut(s) 585, 659, 841, 1391
BspLI GGNNCC 2 cut(s) 415, 1105
BspMI ACCTGC 1 cut(s) 1389
BspPI GGATC 1 cut(s) 1079
BspT107I GGYRCC 1 cut(s) 1103
BspTNI GGTCTC 1 cut(s) 985
BsrI ACTGG 2 cut(s) 1283, 1294
BssECI CCNNGG 5 cut(s) 118, 682, 1067, 1174, 1421
BssMI GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
BssNI GRCGYC 1 cut(s) 526
BssT1I CCWWGG 3 cut(s) 118, 682, 1067
Bst2UI CCWGG 4 cut(s) 88, 162, 315, 1035
BstACI GRCGYC 1 cut(s) 526
BstC8I GCNNGC 2 cut(s) 1082, 1140
BstDEI CTNAG 1 cut(s) 1060
BstF5I GGATG 5 cut(s) 417, 441, 1182, 1345, 1470
BstFNI CGCG 4 cut(s) 585, 659, 841, 1391
BstHHI GCGC 1 cut(s) 1120
BstKTI GATC 5 cut(s) 352, 1029, 1047, 1074, 1440
BstMAI GTCTC 4 cut(s) 25, 517, 985, 1312
BstMBI GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
BstMWI GCNNNNNNNGC 7 cut(s) 404, 413, 594, 797, 900, 1061, 1433
BstNI CCWGG 4 cut(s) 88, 162, 315, 1035
BstNSI RCATGY 1 cut(s) 303
BstSCI CCNGG 7 cut(s) 86, 160, 313, 616, 1033, 1159, 1357
BstSFI CTRYAG 2 cut(s) 24, 628
BstUI CGCG 4 cut(s) 585, 659, 841, 1391
BsuRI GGCC 5 cut(s) 903, 1038, 1238, 1605, 1618
BtgZI GCGATG 1 cut(s) 916
BtrI CACGTC 1 cut(s) 1306
BtsCI GGATG 5 cut(s) 417, 441, 1182, 1345, 1470
BtsIMutI CAGTG 2 cut(s) 211, 723
BtuMI TCGCGA 1 cut(s) 659
BveI ACCTGC 1 cut(s) 1389
Cac8I GCNNGC 2 cut(s) 1082, 1140
CfoI GCGC 1 cut(s) 1120
Cfr13I GGNCC 5 cut(s) 164, 902, 917, 986, 1401
CseI GACGC 2 cut(s) 185, 1397
Csp6I GTAC 5 cut(s) 499, 1041, 1090, 1375, 1549
CviAII CATG 3 cut(s) 273, 300, 1428
CviQI GTAC 5 cut(s) 499, 1041, 1090, 1375, 1549
DdeI CTNAG 1 cut(s) 1060
DpnI GATC 5 cut(s) 351, 1028, 1046, 1073, 1439
DpnII GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
DriI GACNNNNNGTC 1 cut(s) 300
EaeI YGGCCR 1 cut(s) 1236
Eam1105I GACNNNNNGTC 1 cut(s) 300
Eco130I CCWWGG 3 cut(s) 118, 682, 1067
Eco31I GGTCTC 1 cut(s) 985
Eco47I GGWCC 4 cut(s) 164, 917, 986, 1401
Eco57I CTGAAG 1 cut(s) 658
Eco88I CYCGRG 2 cut(s) 829, 883
EcoRI GAATTC 1 cut(s) 1253
EcoRII CCWGG 4 cut(s) 86, 160, 313, 1033
EcoT14I CCWWGG 3 cut(s) 118, 682, 1067
ErhI CCWWGG 3 cut(s) 118, 682, 1067
Esp3I CGTCTC 2 cut(s) 517, 1312
FaeI CATG 3 cut(s) 276, 303, 1431
FaqI GGGAC 4 cut(s) 307, 434, 1179, 1400
FatI CATG 3 cut(s) 272, 299, 1427
FauI CCCGC 1 cut(s) 1377
FbaI TGATCA 1 cut(s) 1026
FblI GTMKAC 1 cut(s) 529
Fnu4HI GCNGC 4 cut(s) 399, 586, 1239, 1606
FokI GGATG 5 cut(s) 404, 428, 1169, 1352, 1477
Fsp4HI GCNGC 4 cut(s) 399, 586, 1239, 1606
FspBI CTAG 2 cut(s) 533, 1614
GlaI GCGC 1 cut(s) 1119
GluI GCNGC 4 cut(s) 399, 586, 1239, 1606
GsaI CCCAGC 1 cut(s) 592
GsuI CTGGAG 1 cut(s) 448
HaeIII GGCC 5 cut(s) 903, 1038, 1238, 1605, 1618
HapII CCGG 7 cut(s) 489, 540, 618, 964, 1161, 1311, 1359
HgaI GACGC 2 cut(s) 185, 1397
HhaI GCGC 1 cut(s) 1120
Hin1I GRCGYC 1 cut(s) 526
Hin1II CATG 3 cut(s) 276, 303, 1431
Hin6I GCGC 1 cut(s) 1118
HinP1I GCGC 1 cut(s) 1118
HpaII CCGG 7 cut(s) 489, 540, 618, 964, 1161, 1311, 1359
HphI GGTGA 3 cut(s) 76, 482, 598
Hpy166II GTNNAC 5 cut(s) 530, 837, 1099, 1404, 1531
Hpy188I TCNGA 7 cut(s) 306, 638, 677, 990, 1178, 1422, 1483
Hpy188III TCNNGA 7 cut(s) 427, 560, 658, 806, 885, 964, 1153
Hpy8I GTNNAC 5 cut(s) 530, 837, 1099, 1404, 1531
Hpy99I CGWCG 2 cut(s) 1331, 1334
HpyAV CCTTC 5 cut(s) 387, 397, 537, 613, 707
HpyCH4IV ACGT 3 cut(s) 526, 648, 1305
HpyCH4V TGCA 3 cut(s) 15, 256, 407
HpyF10VI GCNNNNNNNGC 7 cut(s) 404, 413, 594, 797, 900, 1061, 1433
HpyF3I CTNAG 1 cut(s) 1060
HpySE526I ACGT 3 cut(s) 526, 648, 1305
Hsp92I GRCGYC 1 cut(s) 526
Hsp92II CATG 3 cut(s) 276, 303, 1431
HspAI GCGC 1 cut(s) 1118
Kpn2I TCCGGA 1 cut(s) 963
Ksp22I TGATCA 1 cut(s) 1026
Kzo9I GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
LmnI GCTCC 3 cut(s) 413, 805, 1069
LweI GCATC 3 cut(s) 450, 944, 1191
MaeI CTAG 2 cut(s) 533, 1614
MaeII ACGT 3 cut(s) 526, 648, 1305
MaeIII GTNAC 3 cut(s) 784, 878, 1313
MalI GATC 5 cut(s) 351, 1028, 1046, 1073, 1439
MboI GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
MboII GAAGA 8 cut(s) 23, 26, 73, 277, 930, 1211, 1315, 1514
MluCI AATT 8 cut(s) 93, 214, 336, 354, 1253, 1285, 1486, 1514
MlyI GAGTC 4 cut(s) 294, 439, 1201, 1348
MmeI TCCRAC 2 cut(s) 1431, 1461
MroI TCCGGA 1 cut(s) 963
MseI TTAA 4 cut(s) 44, 126, 668, 1170
MspA1I CMGCKG 1 cut(s) 401
MspI CCGG 7 cut(s) 489, 540, 618, 964, 1161, 1311, 1359
MspR9I CCNGG 7 cut(s) 88, 162, 315, 618, 1035, 1161, 1359
MvaI CCWGG 4 cut(s) 88, 162, 315, 1035
MvnI CGCG 4 cut(s) 585, 659, 841, 1391
MwoI GCNNNNNNNGC 7 cut(s) 404, 413, 594, 797, 900, 1061, 1433
NciI CCSGG 3 cut(s) 618, 1161, 1359
NdeII GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
NlaIII CATG 3 cut(s) 276, 303, 1431
NlaIV GGNNCC 2 cut(s) 415, 1105
NmeAIII GCCGAG 1 cut(s) 1391
NmuCI GTSAC 1 cut(s) 784
NruI TCGCGA 1 cut(s) 659
NspI RCATGY 1 cut(s) 303
PaeR7I CTCGAG 2 cut(s) 829, 883
PciI ACATGT 1 cut(s) 299
PfeI GAWTC 9 cut(s) 78, 307, 547, 556, 633, 678, 865, 997, 1156
Pfl23II CGTACG 1 cut(s) 1040
PfoI TCCNGGA 3 cut(s) 160, 1159, 1357
PkrI GCNGC 4 cut(s) 400, 587, 1240, 1607
PleI GAGTC 4 cut(s) 293, 438, 1200, 1348
PpsI GAGTC 4 cut(s) 293, 438, 1200, 1348
PscI ACATGT 1 cut(s) 299
Psp1406I AACGTT 1 cut(s) 648
Psp6I CCWGG 4 cut(s) 86, 160, 313, 1033
PspFI CCCAGC 1 cut(s) 588
PspGI CCWGG 4 cut(s) 86, 160, 313, 1033
PspLI CGTACG 1 cut(s) 1040
PspN4I GGNNCC 2 cut(s) 415, 1105
PspPI GGNCC 5 cut(s) 164, 902, 917, 986, 1401
PspXI VCTCGAGB 1 cut(s) 829
RruI TCGCGA 1 cut(s) 659
RsaI GTAC 5 cut(s) 500, 1042, 1091, 1376, 1550
RsaNI GTAC 5 cut(s) 499, 1041, 1090, 1375, 1549
SaqAI TTAA 4 cut(s) 44, 126, 668, 1170
SatI GCNGC 4 cut(s) 399, 586, 1239, 1606
Sau3AI GATC 5 cut(s) 349, 1026, 1044, 1071, 1437
Sau96I GGNCC 5 cut(s) 164, 902, 917, 986, 1401
SchI GAGTC 4 cut(s) 294, 439, 1201, 1348
ScrFI CCNGG 7 cut(s) 88, 162, 315, 618, 1035, 1161, 1359
SfaNI GCATC 3 cut(s) 450, 944, 1191
SfcI CTRYAG 2 cut(s) 24, 628
Sfr274I CTCGAG 2 cut(s) 829, 883
SinI GGWCC 4 cut(s) 164, 917, 986, 1401
SlaI CTCGAG 2 cut(s) 829, 883
SmlI CTYRAG 3 cut(s) 804, 829, 883
SmoI CTYRAG 3 cut(s) 804, 829, 883
Sse9I AATT 8 cut(s) 93, 214, 336, 354, 1253, 1285, 1486, 1514
SsiI CCGC 9 cut(s) 399, 585, 841, 1001, 1239, 1384, 1391, 1590, 1606
SspI AATATT 1 cut(s) 141
SspMI CTAG 2 cut(s) 533, 1614
StyD4I CCNGG 7 cut(s) 86, 160, 313, 616, 1033, 1159, 1357
StyI CCWWGG 3 cut(s) 118, 682, 1067
TaiI ACGT 3 cut(s) 529, 651, 1308
TaqI TCGA 6 cut(s) 830, 863, 884, 955, 1260, 1525
TaqII GACCGA 1 cut(s) 1009
TasI AATT 8 cut(s) 93, 214, 336, 354, 1253, 1285, 1486, 1514
TatI WGTACW 1 cut(s) 1374
TauI GCSGC 4 cut(s) 401, 588, 1241, 1608
TfiI GAWTC 9 cut(s) 78, 307, 547, 556, 633, 678, 865, 997, 1156
Tru1I TTAA 4 cut(s) 44, 126, 668, 1170
Tru9I TTAA 4 cut(s) 44, 126, 668, 1170
TscAI CASTG 2 cut(s) 211, 730
TseFI GTSAC 1 cut(s) 784
Tsp45I GTSAC 1 cut(s) 784
TspDTI ATGAA 5 cut(s) 654, 710, 746, 1246, 1572
TspGWI ACGGA 3 cut(s) 264, 410, 1224
TspRI CASTG 2 cut(s) 211, 730
VpaK11BI GGWCC 4 cut(s) 164, 917, 986, 1401
XapI RAATTY 2 cut(s) 1253, 1285
XceI RCATGY 1 cut(s) 303
XcmI CCANNNNNNNNNTGG 1 cut(s) 398
XhoI CTCGAG 2 cut(s) 829, 883
XmiI GTMKAC 1 cut(s) 529
XspI CTAG 2 cut(s) 533, 1614
ZraI GACGTC 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.