Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009782

Physical Location & Seq

Genomic Coordinates Reverse (-)

1521046 .. 1525810

Gene Structure 4765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG024100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAGAGAGAGTAGGATTTATTGTTTTTGCATTGCTTTGGTGCTGGTTTTAGTTCATGGCGCTAATGGTGAAGACCCATATAAGTTAATCACCTGGAAAATCACTTACGGCGACATTTATCCTCTGGGTGTTAAGCAACAGGGGATCTTGATCAATGACCAATTTCCAGGGCCTCAAATTGATGCTGTGACAAATATGAACTTGGTTATCAGTGTGTTCAATTACTTGAGTGAACCATTTCTTATTTCTTGGGATGGTATACAGCAGAGAAGGAACTCATGGCAGGATGGAATGTATGGCACTAACTGTCCAATTCTACCTGGAAAGAACTTCACTTACAATATCCAAGTGAAGGATCAGATTGGTAGCTTTTTCTACTTCCCCTCATTTTTGTTCCACAAAGCTGCTGGAGGCTTTGGTGGCATCAGAATCTGGAGCCGTCCTAAGATTCCGGTTCCTTTCCCTAATCCTGCTGGAGACCACACTGTACTAGCTGGCGACTGGTTTAAAACTAGTCATTATATACTGAGACGATACTTCTTGGAGCGTGGTCGCAATCTTCCCTTGCCTGATGGTCTTCTCATCAACGGTCGTGGATGGAATGGATACACATTCACTGTTGAACCAGGCAAGACATATAGGTTTAGGATATCAAATGTAGGGCTTACGACATCCCTTAACTTTAGAATTCAAGGACATAAGATGAAATTGGTGGAGGTGGAAGGATCTCATACACTTCAGAACACATATGATGCACTTGATATCCATCTGGGGCAGTCCTATTCTGTCCTGGTCACAGCTGATCAGCCAGCTCAGGACTACTACGTGGTCGTCTCTTCCCGCTTCACCACCAAGATACTCACCACCACAGCCATTCTTCACTACAGCAATTCGCGCAAGGGAGTTTCAGGTCCTATCCCTTGGGGGCCTACCAATGAGGTTGCTTGGTCCCTCAACCAAGCAAGATCTATACGATGGAATTTGACAGCTAGTGGACCTAGGCCTAATCCTCAAGGCTCATACCACTATGGAATGATCAAGCCAGCCAGGACAATTATGCTTGCAAACTCTGCACCCTATATCAATGGCAAGCAGAGGTATGCAGTCAACGGTGTCTCTTATGTTCCACCAGACACTCCTTTGAAACTGGCTGATTACTTCAACATTCCGGGAGTTTACAATCTCGGAAGCATTCCTACCAATCCTCCAGGAGGAAATGGTGGCTACCTGCAAACCTCAGTCATGCACGCCAACTTCCGAGAATTTGTTGAGATTGTTTTCCAAAATTGGGAAGATTCTGTGCAATCATGGCACATTGACGGCTATTCGTTCTTTGTACTGGGGATGGATGGAGGACAATGGACTCAAGGAAGTAGAGCACGTTACAATTTGAGAGACACAGTTGCGCGCTCCACTGTTCAGGTAAGAAAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

478

Amino Acids

53.87

Weight (kDa)

9.45

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 147	4.6e-37	Multicopper oxidase
Cu-oxidase	PF00394	160 - 298	5.1e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	378 - 476	3e-19	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22010
fragaria_vesca	FvH4_3g01840
malus_domestica	MD05G1348500.v1.1 MD10G1323500.v1.1
prunus_persica	Prupe.4G018800_v2.0.a1 Prupe.4G018800_v2.0.a1 Prupe.4G214400_v2.0.a1
pyrus_communis	pycom05g31590 pycom10g27380
rosa_chinensis	RchiOBHm_Chr5g0002711
rosa_laevigata	RLG00000031053
rosa_multiflora	Rmu_co8386063.1_g000001 Rmu_sc0037618.1_g000001 Rmu_sc0039838.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073170
rosa_rugosa	Rorug04G0398600
rosa_samantha	Rh5AG021800 Rh5BG024700 Rh5CG024100 Rh5DG023100
rosa_wichuraiana	Rw5G002030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1236
AccI	GTMKAC	1 cut(s)	259
AccII	CGCG	2 cut(s)	895, 1408
AciI	CCGC	1 cut(s)	841
AclWI	GGATC	3 cut(s)	152, 363, 733
AcsI	RAATTY	3 cut(s)	687, 979, 1262
AcuI	CTGAAG	1 cut(s)	722
AfaI	GTAC	2 cut(s)	489, 1338
AfiI	CCNNNNNNNGG	3 cut(s)	352, 1211, 1288
AgsI	TTSAA	5 cut(s)	220, 623, 692, 1144, 1162
AhlI	ACTAGT	1 cut(s)	512
AjnI	CCWGG	7 cut(s)	92, 166, 319, 625, 789, 1046, 1207
AluBI	AGCT	6 cut(s)	369, 404, 494, 800, 812, 989
AluI	AGCT	6 cut(s)	369, 404, 494, 800, 812, 989
Alw21I	GWGCWC	1 cut(s)	1381
Alw26I	GTCTC	5 cut(s)	471, 523, 838, 1120, 1389
AlwI	GGATC	3 cut(s)	152, 363, 733
AlwNI	CAGNNNCTG	1 cut(s)	432
AoxI	GGCC	3 cut(s)	170, 926, 1001
ApeKI	GCWGC	1 cut(s)	404
ApoI	RAATTY	3 cut(s)	687, 979, 1262
Asp700I	GAANNNNTTC	1 cut(s)	237
AspA2I	CCTAGG	1 cut(s)	998
AspLEI	GCGC	4 cut(s)	62, 897, 1408, 1410
AspS9I	GGNCC	5 cut(s)	170, 911, 926, 948, 995
AsuC2I	CCSGG	1 cut(s)	1170
AsuHPI	GGTGA	4 cut(s)	80, 82, 838, 853
AvaII	GGWCC	3 cut(s)	911, 948, 995
AvrII	CCTAGG	1 cut(s)	998
BarI	GAAGNNNNNNTAC	2 cut(s)	1180, 1212
BbsI	GAAGAC	2 cut(s)	78, 569
Bbv12I	GWGCWC	1 cut(s)	1381
BbvI	GCAGC	1 cut(s)	391
BccI	CCATC	8 cut(s)	248, 281, 566, 591, 774, 969, 1339, 1343
BceAI	ACGGC	3 cut(s)	124, 423, 1336
BciT130I	CCWGG	7 cut(s)	94, 168, 321, 627, 791, 1048, 1209
BciVI	GTATCC	1 cut(s)	599
BclI	TGATCA	3 cut(s)	150, 802, 1035
BcnI	CCSGG	1 cut(s)	1170
BcoDI	GTCTC	5 cut(s)	471, 523, 838, 1120, 1389
BcuI	ACTAGT	1 cut(s)	512
BfaI	CTAG	4 cut(s)	491, 513, 990, 999
BfmI	CTRYAG	1 cut(s)	883
BfoI	RGCGCY	1 cut(s)	63
BfuAI	ACCTGC	1 cut(s)	1236
BfuI	GTATCC	1 cut(s)	599
BglII	AGATCT	1 cut(s)	965
BisI	GCNGC	1 cut(s)	405
BlnI	CCTAGG	1 cut(s)	998
BlsI	GCNGC	1 cut(s)	406
Bme1390I	CCNGG	8 cut(s)	94, 168, 321, 627, 791, 1048, 1170, 1209
Bme18I	GGWCC	3 cut(s)	911, 948, 995
BmgT120I	GGNCC	5 cut(s)	170, 911, 926, 948, 995
BmiI	GGNNCC	4 cut(s)	437, 456, 927, 950
BmrFI	CCNGG	8 cut(s)	94, 168, 321, 627, 791, 1048, 1170, 1209
BmrI	ACTGGG	1 cut(s)	1349
BmsI	GCATC	3 cut(s)	172, 432, 742
BmuI	ACTGGG	1 cut(s)	1349
BpiI	GAAGAC	2 cut(s)	78, 569
BpmI	CTGGAG	4 cut(s)	429, 454, 495, 1191
Bpu10I	CCTNAGC	1 cut(s)	813
BpuEI	CTTGAG	3 cut(s)	247, 996, 1350
BpuMI	CCSGG	1 cut(s)	1170
BsaAI	YACGTR	1 cut(s)	826
BsaBI	GATNNNNATC	2 cut(s)	149, 765
BsaI	GGTCTC	1 cut(s)	471
BsaJI	CCNNGG	3 cut(s)	167, 920, 998
BsaWI	WCCGGW	1 cut(s)	451
BsaXI	ACNNNNNCTCC	2 cut(s)	1189, 1219
Bsc4I	CCNNNNNNNGG	3 cut(s)	352, 1211, 1288
Bse1I	ACTGG	3 cut(s)	506, 1152, 1344
Bse3DI	GCAATG	1 cut(s)	30
Bse8I	GATNNNNATC	2 cut(s)	149, 765
BseBI	CCWGG	7 cut(s)	94, 168, 321, 627, 791, 1048, 1209
BseDI	CCNNGG	3 cut(s)	167, 920, 998
BseGI	GGATG	6 cut(s)	259, 292, 602, 671, 1350, 1354
BseJI	GATNNNNATC	2 cut(s)	149, 765
BseLI	CCNNNNNNNGG	3 cut(s)	352, 1211, 1288
BseMI	GCAATG	1 cut(s)	30
BseMII	CTCAG	3 cut(s)	518, 827, 1251
BseNI	ACTGG	3 cut(s)	506, 1152, 1344
BsePI	GCGCGC	1 cut(s)	1406
BseXI	GCAGC	1 cut(s)	391
BsgI	GTGCAG	1 cut(s)	1056
Bsh1236I	CGCG	2 cut(s)	895, 1408
Bsh1285I	CGRYCG	1 cut(s)	592
BshFI	GGCC	3 cut(s)	172, 928, 1003
BsiEI	CGRYCG	1 cut(s)	592
BsiHKAI	GWGCWC	1 cut(s)	1381
BsiSI	CCGG	2 cut(s)	452, 1169
BslFI	GGGAC	1 cut(s)	934
BslI	CCNNNNNNNGG	3 cut(s)	352, 1211, 1288
BsmAI	GTCTC	5 cut(s)	471, 523, 838, 1120, 1389
BsmBI	CGTCTC	2 cut(s)	523, 838
BsmFI	GGGAC	1 cut(s)	934
BsmI	GAATGC	1 cut(s)	1191
BsnI	GGCC	3 cut(s)	172, 928, 1003
Bso31I	GGTCTC	1 cut(s)	471
Bsp1286I	GDGCHC	1 cut(s)	1381
Bsp143I	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
BspACI	CCGC	1 cut(s)	841
BspANI	GGCC	3 cut(s)	172, 928, 1003
BspCNI	CTCAG	3 cut(s)	519, 826, 1250
BspFNI	CGCG	2 cut(s)	895, 1408
BspLI	GGNNCC	4 cut(s)	437, 456, 927, 950
BspMI	ACCTGC	1 cut(s)	1236
BspPI	GGATC	3 cut(s)	152, 363, 733
BspTNI	GGTCTC	1 cut(s)	471
BsrDI	GCAATG	1 cut(s)	30
BsrI	ACTGG	3 cut(s)	506, 1152, 1344
BssECI	CCNNGG	3 cut(s)	167, 920, 998
BssHII	GCGCGC	1 cut(s)	1406
BssMI	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
BssNAI	GTATAC	1 cut(s)	260
BssT1I	CCWWGG	2 cut(s)	920, 998
Bst1107I	GTATAC	1 cut(s)	260
Bst2UI	CCWGG	7 cut(s)	94, 168, 321, 627, 791, 1048, 1209
Bst4CI	ACNGT	7 cut(s)	308, 487, 590, 619, 1112, 1402, 1417
Bst6I	CTCTTC	1 cut(s)	841
BstAPI	GCANNNNNTGC	1 cut(s)	1070
BstBAI	YACGTR	1 cut(s)	826
BstC8I	GCNNGC	7 cut(s)	496, 810, 1044, 1062, 1091, 1248, 1408
BstDEI	CTNAG	4 cut(s)	444, 527, 813, 1237
BstENI	CCTNNNNNAGG	1 cut(s)	1209
BstF5I	GGATG	6 cut(s)	259, 292, 602, 671, 1350, 1354
BstFNI	CGCG	2 cut(s)	895, 1408
BstH2I	RGCGCY	1 cut(s)	63
BstHHI	GCGC	4 cut(s)	62, 897, 1408, 1410
BstKTI	GATC	7 cut(s)	147, 153, 358, 728, 805, 968, 1038
BstMAI	GTCTC	5 cut(s)	471, 523, 838, 1120, 1389
BstMBI	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
BstMCI	CGRYCG	1 cut(s)	592
BstMWI	GCNNNNNNNGC	4 cut(s)	420, 894, 1070, 1309
BstNI	CCWGG	7 cut(s)	94, 168, 321, 627, 791, 1048, 1209
BstSCI	CCNGG	8 cut(s)	92, 166, 319, 625, 789, 1046, 1168, 1207
BstSFI	CTRYAG	1 cut(s)	883
BstUI	CGCG	2 cut(s)	895, 1408
BstV1I	GCAGC	1 cut(s)	391
BstV2I	GAAGAC	2 cut(s)	78, 569
BstX2I	RGATCY	3 cut(s)	144, 725, 965
BstYI	RGATCY	3 cut(s)	144, 725, 965
BstZ17I	GTATAC	1 cut(s)	260
BsuI	GTATCC	1 cut(s)	599
BsuRI	GGCC	3 cut(s)	172, 928, 1003
BtsCI	GGATG	6 cut(s)	259, 292, 602, 671, 1350, 1354
BtsIMutI	CAGTG	4 cut(s)	217, 483, 615, 1413
BveI	ACCTGC	1 cut(s)	1236
Cac8I	GCNNGC	7 cut(s)	496, 810, 1044, 1062, 1091, 1248, 1408
CaiI	CAGNNNCTG	1 cut(s)	432
CfoI	GCGC	4 cut(s)	62, 897, 1408, 1410
Cfr13I	GGNCC	5 cut(s)	170, 911, 926, 948, 995
Csp6I	GTAC	2 cut(s)	488, 1337
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CviAII	CATG	4 cut(s)	56, 279, 1243, 1308
CviQI	GTAC	2 cut(s)	488, 1337
DdeI	CTNAG	4 cut(s)	444, 527, 813, 1237
DpnI	GATC	7 cut(s)	146, 152, 357, 727, 804, 967, 1037
DpnII	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
DraI	TTTAAA	1 cut(s)	508
Eam1104I	CTCTTC	1 cut(s)	841
EarI	CTCTTC	1 cut(s)	841
Eco130I	CCWWGG	2 cut(s)	920, 998
Eco147I	AGGCCT	1 cut(s)	1003
Eco31I	GGTCTC	1 cut(s)	471
Eco32I	GATATC	2 cut(s)	651, 763
Eco47I	GGWCC	3 cut(s)	911, 948, 995
Eco57I	CTGAAG	1 cut(s)	722
EcoNI	CCTNNNNNAGG	1 cut(s)	1209
EcoO109I	RGGNCCY	3 cut(s)	170, 911, 926
EcoRI	GAATTC	1 cut(s)	687
EcoRII	CCWGG	7 cut(s)	92, 166, 319, 625, 789, 1046, 1207
EcoRV	GATATC	2 cut(s)	651, 763
EcoT14I	CCWWGG	2 cut(s)	920, 998
ErhI	CCWWGG	2 cut(s)	920, 998
Esp3I	CGTCTC	2 cut(s)	523, 838
FaeI	CATG	4 cut(s)	59, 282, 1246, 1311
FaqI	GGGAC	1 cut(s)	934
FatI	CATG	4 cut(s)	55, 278, 1242, 1307
FauI	CCCGC	1 cut(s)	848
FauNDI	CATATG	1 cut(s)	748
FbaI	TGATCA	3 cut(s)	150, 802, 1035
FblI	GTMKAC	1 cut(s)	259
Fnu4HI	GCNGC	1 cut(s)	405
FokI	GGATG	6 cut(s)	266, 299, 609, 658, 1357, 1361
Fsp4HI	GCNGC	1 cut(s)	405
FspBI	CTAG	4 cut(s)	491, 513, 990, 999
GlaI	GCGC	4 cut(s)	61, 896, 1407, 1409
GluI	GCNGC	1 cut(s)	405
GsuI	CTGGAG	4 cut(s)	429, 454, 495, 1191
HaeII	RGCGCY	1 cut(s)	63
HaeIII	GGCC	3 cut(s)	172, 928, 1003
HapII	CCGG	2 cut(s)	452, 1169
HhaI	GCGC	4 cut(s)	62, 897, 1408, 1410
Hin1II	CATG	4 cut(s)	59, 282, 1246, 1311
Hin6I	GCGC	4 cut(s)	60, 895, 1406, 1408
HinP1I	GCGC	4 cut(s)	60, 895, 1406, 1408
HincII	GTYRAC	1 cut(s)	1108
HindII	GTYRAC	1 cut(s)	1108
HinfI	GANTC	4 cut(s)	429, 448, 1295, 1363
HpaII	CCGG	2 cut(s)	452, 1169
HphI	GGTGA	4 cut(s)	80, 82, 838, 853
Hpy166II	GTNNAC	5 cut(s)	233, 260, 995, 1108, 1177
Hpy188I	TCNGA	5 cut(s)	360, 428, 741, 1187, 1259
Hpy188III	TCNNGA	3 cut(s)	148, 433, 815
Hpy8I	GTNNAC	5 cut(s)	233, 260, 995, 1108, 1177
HpyAV	CCTTC	3 cut(s)	264, 346, 716
HpyCH4III	ACNGT	7 cut(s)	308, 487, 590, 619, 1112, 1402, 1417
HpyCH4IV	ACGT	2 cut(s)	825, 1381
HpyCH4V	TGCA	8 cut(s)	30, 755, 1064, 1073, 1103, 1231, 1246, 1303
HpyF10VI	GCNNNNNNNGC	4 cut(s)	420, 894, 1070, 1309
HpyF3I	CTNAG	4 cut(s)	444, 527, 813, 1237
HpySE526I	ACGT	2 cut(s)	825, 1381
Hsp92II	CATG	4 cut(s)	59, 282, 1246, 1311
HspAI	GCGC	4 cut(s)	60, 895, 1406, 1408
Ksp22I	TGATCA	3 cut(s)	150, 802, 1035
Kzo9I	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
LmnI	GCTCC	3 cut(s)	435, 544, 1415
Lsp1109I	GCAGC	1 cut(s)	391
LweI	GCATC	3 cut(s)	172, 432, 742
MaeI	CTAG	4 cut(s)	491, 513, 990, 999
MaeII	ACGT	2 cut(s)	825, 1381
MaeIII	GTNAC	3 cut(s)	187, 793, 1382
MalI	GATC	7 cut(s)	146, 152, 357, 727, 804, 967, 1037
MboI	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
MboII	GAAGA	6 cut(s)	83, 551, 569, 828, 869, 1304
MflI	RGATCY	3 cut(s)	144, 725, 965
MhlI	GDGCHC	1 cut(s)	1381
MlyI	GAGTC	1 cut(s)	1357
MroXI	GAANNNNTTC	1 cut(s)	237
MseI	TTAA	4 cut(s)	86, 132, 507, 678
MspA1I	CMGCKG	1 cut(s)	800
MspI	CCGG	2 cut(s)	452, 1169
MspR9I	CCNGG	8 cut(s)	94, 168, 321, 627, 791, 1048, 1170, 1209
Mva1269I	GAATGC	1 cut(s)	1191
MvaI	CCWGG	7 cut(s)	94, 168, 321, 627, 791, 1048, 1209
MvnI	CGCG	2 cut(s)	895, 1408
MwoI	GCNNNNNNNGC	4 cut(s)	420, 894, 1070, 1309
NciI	CCSGG	1 cut(s)	1170
NdeI	CATATG	1 cut(s)	748
NdeII	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
NlaIII	CATG	4 cut(s)	59, 282, 1246, 1311
NlaIV	GGNNCC	4 cut(s)	437, 456, 927, 950
NmuCI	GTSAC	2 cut(s)	187, 793
PauI	GCGCGC	1 cut(s)	1406
PceI	AGGCCT	1 cut(s)	1003
PctI	GAATGC	1 cut(s)	1191
PdmI	GAANNNNTTC	1 cut(s)	237
PfeI	GAWTC	3 cut(s)	429, 448, 1295
PfoI	TCCNGGA	2 cut(s)	1168, 1207
PkrI	GCNGC	1 cut(s)	406
PleI	GAGTC	1 cut(s)	1357
PpsI	GAGTC	1 cut(s)	1357
Ppu21I	YACGTR	1 cut(s)	826
PpuMI	RGGWCCY	1 cut(s)	911
Psp5II	RGGWCCY	1 cut(s)	911
Psp6I	CCWGG	7 cut(s)	92, 166, 319, 625, 789, 1046, 1207
PspGI	CCWGG	7 cut(s)	92, 166, 319, 625, 789, 1046, 1207
PspN4I	GGNNCC	4 cut(s)	437, 456, 927, 950
PspPI	GGNCC	5 cut(s)	170, 911, 926, 948, 995
PspPPI	RGGWCCY	1 cut(s)	911
PsrI	GAACNNNNNNTAC	2 cut(s)	320, 352
PstNI	CAGNNNCTG	1 cut(s)	432
PsuI	RGATCY	3 cut(s)	144, 725, 965
PteI	GCGCGC	1 cut(s)	1406
PvuII	CAGCTG	1 cut(s)	800
RsaI	GTAC	2 cut(s)	489, 1338
RsaNI	GTAC	2 cut(s)	488, 1337
SaqAI	TTAA	4 cut(s)	86, 132, 507, 678
SatI	GCNGC	1 cut(s)	405
Sau3AI	GATC	7 cut(s)	144, 150, 355, 725, 802, 965, 1035
Sau96I	GGNCC	5 cut(s)	170, 911, 926, 948, 995
SchI	GAGTC	1 cut(s)	1357
ScrFI	CCNGG	8 cut(s)	94, 168, 321, 627, 791, 1048, 1170, 1209
SduI	GDGCHC	1 cut(s)	1381
SfaNI	GCATC	3 cut(s)	172, 432, 742
SfcI	CTRYAG	1 cut(s)	883
SinI	GGWCC	3 cut(s)	911, 948, 995
SmlI	CTYRAG	3 cut(s)	226, 1011, 1365
SmoI	CTYRAG	3 cut(s)	226, 1011, 1365
SpeI	ACTAGT	1 cut(s)	512
SseBI	AGGCCT	1 cut(s)	1003
SsiI	CCGC	1 cut(s)	841
SspMI	CTAG	4 cut(s)	491, 513, 990, 999
StuI	AGGCCT	1 cut(s)	1003
StyD4I	CCNGG	8 cut(s)	92, 166, 319, 625, 789, 1046, 1168, 1207
StyI	CCWWGG	2 cut(s)	920, 998
TaaI	ACNGT	7 cut(s)	308, 487, 590, 619, 1112, 1402, 1417
TaiI	ACGT	2 cut(s)	828, 1384
TatI	WGTACW	2 cut(s)	487, 1336
TfiI	GAWTC	3 cut(s)	429, 448, 1295
Tru1I	TTAA	4 cut(s)	86, 132, 507, 678
Tru9I	TTAA	4 cut(s)	86, 132, 507, 678
TscAI	CASTG	4 cut(s)	217, 490, 622, 1420
TseFI	GTSAC	2 cut(s)	187, 793
TseI	GCWGC	1 cut(s)	404
Tsp45I	GTSAC	2 cut(s)	187, 793
TspDTI	ATGAA	3 cut(s)	44, 212, 719
TspRI	CASTG	4 cut(s)	217, 490, 622, 1420
VpaK11BI	GGWCC	3 cut(s)	911, 948, 995
XagI	CCTNNNNNAGG	1 cut(s)	1209
XapI	RAATTY	3 cut(s)	687, 979, 1262
XcmI	CCANNNNNNNNNTGG	1 cut(s)	404
XmaJI	CCTAGG	1 cut(s)	998
XmiI	GTMKAC	1 cut(s)	259
XmnI	GAANNNNTTC	1 cut(s)	237
XspI	CTAG	4 cut(s)	491, 513, 990, 999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.