Prupe.4G214400_v2.0.a1

L-ascorbate oxidase homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
13390588 .. 13392657
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G214400.1

Sequence Viewer

Length: 261 bp
ATGAGAGAGTGCAAACTTCTTTCTTTTGCCATTGTTTTGGTTCTGTTTCTTGTTAATGGCGTTAATGGTAAAGACCCATATAGATTCTTCACTTGGAAAATCACTTATGGTGACATTTATCCGCTAAGAGTTCAAAGGGGATGGAAGGAAGGTGCAGGGTGCCAAGGATCGGAGAGGTTGCTACAAGAGAAGAAAGACTTCCCAATCATGGACAACAGCCTCTTTGCTATCTTGTCCCAACATGTCGAAATTCGCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

10.0

Weight (kDa)

8.91

Isoelectric Point (pI)

20.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 159
AciI CCGC 1 cut(s) 122
AclWI GGATC 1 cut(s) 175
AcsI RAATTY 1 cut(s) 249
AfiI CCNNNNNNNGG 2 cut(s) 169, 208
AflIII ACRYGT 1 cut(s) 241
AgsI TTSAA 1 cut(s) 134
AlwI GGATC 1 cut(s) 175
ApoI RAATTY 1 cut(s) 249
Asp700I GAANNNNTTC 1 cut(s) 197
AsuHPI GGTGA 1 cut(s) 122
BanI GGYRCC 1 cut(s) 159
BccI CCATC 1 cut(s) 135
BmiI GGNNCC 1 cut(s) 161
BsaJI CCNNGG 1 cut(s) 163
Bsc4I CCNNNNNNNGG 2 cut(s) 169, 208
BseDI CCNNGG 1 cut(s) 163
BseGI GGATG 1 cut(s) 146
BseLI CCNNNNNNNGG 2 cut(s) 169, 208
BsgI GTGCAG 1 cut(s) 174
BshNI GGYRCC 1 cut(s) 159
BslFI GGGAC 1 cut(s) 220
BslI CCNNNNNNNGG 2 cut(s) 169, 208
BsmFI GGGAC 1 cut(s) 220
Bsp143I GATC 1 cut(s) 167
BspACI CCGC 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 161
BspPI GGATC 1 cut(s) 175
BspT107I GGYRCC 1 cut(s) 159
BssECI CCNNGG 1 cut(s) 163
BssMI GATC 1 cut(s) 167
BssT1I CCWWGG 1 cut(s) 163
BstDEI CTNAG 1 cut(s) 125
BstF5I GGATG 1 cut(s) 146
BstKTI GATC 1 cut(s) 170
BstMBI GATC 1 cut(s) 167
BstNSI RCATGY 1 cut(s) 245
BstXI CCANNNNNNTGG 1 cut(s) 37
BtsCI GGATG 1 cut(s) 146
CviAII CATG 2 cut(s) 208, 242
CviJI RGCY 1 cut(s) 219
CviKI_1 RGCY 1 cut(s) 219
DdeI CTNAG 1 cut(s) 125
DpnI GATC 1 cut(s) 169
DpnII GATC 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 163
EcoT14I CCWWGG 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 163
FaeI CATG 2 cut(s) 211, 245
FaiI YATR 5 cut(s) 79, 81, 108, 209, 243
FalI AAGNNNNNCTT 2 cut(s) 182, 214
FaqI GGGAC 1 cut(s) 220
FatI CATG 2 cut(s) 207, 241
FokI GGATG 1 cut(s) 153
Hin1II CATG 2 cut(s) 211, 245
HinfI GANTC 1 cut(s) 84
HphI GGTGA 1 cut(s) 122
Hpy188I TCNGA 1 cut(s) 172
HpyAV CCTTC 2 cut(s) 139, 143
HpyCH4V TGCA 2 cut(s) 12, 155
HpyF3I CTNAG 1 cut(s) 125
Hsp92II CATG 2 cut(s) 211, 245
Kzo9I GATC 1 cut(s) 167
LpnPI CCDG 1 cut(s) 141
MaeIII GTNAC 1 cut(s) 110
MalI GATC 1 cut(s) 169
MboI GATC 1 cut(s) 167
MboII GAAGA 2 cut(s) 79, 202
MluCI AATT 1 cut(s) 249
MnlI CCTC 2 cut(s) 168, 230
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 2 cut(s) 54, 63
NdeII GATC 1 cut(s) 167
NlaIII CATG 2 cut(s) 211, 245
NlaIV GGNNCC 1 cut(s) 161
NmuCI GTSAC 1 cut(s) 110
NspI RCATGY 1 cut(s) 245
PciI ACATGT 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 1 cut(s) 84
PscI ACATGT 1 cut(s) 241
PspN4I GGNNCC 1 cut(s) 161
SaqAI TTAA 2 cut(s) 54, 63
Sau3AI GATC 1 cut(s) 167
SetI ASST 2 cut(s) 154, 179
SgeI CNNG 8 cut(s) 62, 105, 168, 176, 197, 220, 244, 254
Sse9I AATT 1 cut(s) 249
SsiI CCGC 1 cut(s) 122
StyI CCWWGG 1 cut(s) 163
TaqI TCGA 1 cut(s) 246
TasI AATT 1 cut(s) 249
TfiI GAWTC 1 cut(s) 84
Tru1I TTAA 2 cut(s) 54, 63
Tru9I TTAA 2 cut(s) 54, 63
TseFI GTSAC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 110
XapI RAATTY 1 cut(s) 249
XceI RCATGY 1 cut(s) 245
XmnI GAANNNNTTC 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.