AT4G23980

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0009840
Physical Location & Seq
Forward (+)
12451143 .. 12455369
4227 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G23980.2

Sequence Viewer

Length: 1917 bp
ATGGCAAATCGCGGAGGTGAATATCTGTACGATGAGTTATGGAAATTATGCGCGGGACCTCTTGTTGATGTTCCTCAAGCTCAAGAAAGAGTTTATTATTTTCCTCAAGGTCACATGGAACAACTCGAAGCGTCAACGCAACAAGTCGACTTAAATACGATGAAGCCTCTTTTTGTTCTTCCTCCTAAGATTCTCTGCAATGTTATGAACGTTAGTCTTCAGGCGGAGAAAGATACGGATGAGGTCTATGCTCAGATTACTTTGATCCCTGTTGGAACTGAAGTTGATGAACCTATGAGTCCTGATCCCTCTCCTCCTGAGTTGCAAAGGCCGAAAGTTCACTCTTTCAGCAAGGTTTTGACAGCGTCTGATACAAGCACCCATGGTGGCTTTTCTGTTCTAAGGAAACATGCCACGGAATGTCTTCCTCCGCTGGATATGACTCAGCAAACCCCGACCCAGGAGTTAGTAGCCGAAGATGTGCACGGTTATCAGTGGAAATTCAAGCATATTTTTAGAGGCCAACCACGGAGGCATCTATTGACGACAGGGTGGAGCACCTTTGTTACATCAAAGAGATTGGTTGCTGGGGACACCTTTGTATTCCTGAGAGGGGAGAACGGAGAGTTGCGAGTTGGAGTCAGACGTGCTAATCTTCAACAGAGCAGTATGCCTTCATCCGTTATATCAAGTCATAGTATGCATCTGGGAGTGCTTGCTACTGCACGCCATGCTACTCAAACGAAAACTATGTTCATTGTATACTATAAACCAAGGACAAGCCAATTCATCATTAGCTTGAACAAATATCTAGAAGCCATGAGCAATAAGTTCTCTGTAGGGATGAGATTTAAGATGCGTTTTGAGGGAGAGGATTCCCCTGAAAGAAGATATTCTGGCACGGTTATTGGTGTGAAAGACTGCTCCCCTCACTGGAAAGACTCAAAATGGCGATGCTTAGAAGTTCATTGGGATGAGCCTGCATCGATTTCAAGACCCAATAAGGTTTCACCATGGGAAATTGAACCGTTTGTAAATTCAGAAAACGTTCCCAAATCAGTTATGCTGAAGAACAAAAGGCCCCGTCAAGTTAGTGAAGTATCTGCACTTGATGTAGGCATAACAGCTTCAAACCTTTGGAGCTCTGTTTTGACGCAACCCCATGAGTTTGCACAATCGTGCATCACCTCACAGTGGAGTTCTCCTCAGCAATGTCATCGTGATGCAAATGAGGATGCTAAGAAATCTGACTGGCTAAATAACTCTTACTCTGTGTCAAATGTAGCAAAAGACTCAACACTGAACGACCAAATGGTTTCCCCAGTCGAGCAGAAGAAGCCTGAGACAACCGCTAATTATAGATTATTTGGAATTGATCTGATGAGTTCCTCCCTAGCGGTTCCTGAGGAGAAAACTGCACCCATGCGACCAATCAACATATCCAAACCGACTATGGACAGCCACTCAGACCCAAAATCAGAGATTTCAAAAGTATCAGAAGAGAAAAAGCAGGAACCTGCGGAGGGATCACCAAAAGAGGTCCAAAGCAAGCAAAGCAGTTCTACAAGAAGCCGTACCAAGGTGCAGATGCAAGGCGTACCTGTGGGCAGGGCTGTGGATTTAAATGCGCTAAAGGGGTACAACGAGCTCATAGATGACATTGAGAAGCTGTTTGACATAAAAGGGGAACTGCGGAGTCGCAATCAATGGGAAATAGTGTTCACAGACGATGAGGGAGATATGATGCTTGTCGGTGATGACCCATGGCCTGAGTTCTGCAACATGGTGAAGAGAATATTCATATGGTCGAAAGAGGAAGTGAAGAAAATGACGCCTGGGAACCAACTCCGGATGCTGTTAAGGGAAGTTGAAACAACACTAACAACAACTTCCAAAACAGATAATCATTCCAACTAA

Protein Analysis

638

Amino Acids

72.28

Weight (kDa)

6.5

Isoelectric Point (pI)

56.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 116 - 218 7.2e-23 B3 DNA binding domain
BRWD_AD PF25313 244 - 344 2.4e-10 BRWD/PHIP ancillary domain-like domain
ARF_AD PF06507 263 - 344 2.7e-37 Auxin response factor ancillary domain
AUX_IAA PF02309 503 - 557 2.6e-07 AUX/IAA family
AUX_IAA PF02309 567 - 609 5.9e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0009840)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23980 AT4G23980
fragaria_vesca FvH4_5g11690 FvH4_5g11690 FvH4_5g11690 FvH4_5g11690 FvH4_5g11690
malus_domestica MD06G1111100.v1.1 MD14G1131900.v1.1
prunus_persica Prupe.5G123400_v2.0.a1
pyrus_communis pycom06g10410
rosa_chinensis RchiOBHm_Chr7g0186081
rosa_laevigata RLG00000004866
rosa_multiflora Rmu_sc0000194.1_g000026
rosa_roxburghii Rroxscaffold_3G00268450
rosa_rugosa Rorug06G0472100
rosa_samantha Rh7AG069800 Rh7BG085600 Rh7CG078500 Rh7DG078500
rosa_wichuraiana Rw7G006530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1525
AccI GTMKAC 2 cut(s) 147, 762
AccII CGCG 2 cut(s) 12, 53
AccIII TCCGGA 1 cut(s) 1848
AciI CCGC 8 cut(s) 12, 53, 224, 431, 1350, 1397, 1520, 1693
AclI AACGTT 2 cut(s) 210, 1047
AclWI GGATC 3 cut(s) 259, 299, 1534
AcsI RAATTY 2 cut(s) 500, 1036
AcuI CTGAAG 3 cut(s) 203, 300, 1088
AcyI GRCGYC 1 cut(s) 1832
AfaI GTAC 4 cut(s) 29, 1576, 1599, 1640
AfiI CCNNNNNNNGG 6 cut(s) 460, 613, 933, 1194, 1523, 1579
AgsI TTSAA 8 cut(s) 505, 659, 802, 993, 1025, 1131, 1488, 1871
AjiI CACGTC 1 cut(s) 647
AjnI CCWGG 2 cut(s) 459, 1834
AleI CACNNNNGTG 1 cut(s) 1177
AloI GAACNNNNNNTCC 2 cut(s) 1703, 1735
AluBI AGCT 6 cut(s) 80, 798, 1127, 1143, 1648, 1669
AluI AGCT 6 cut(s) 80, 798, 1127, 1143, 1648, 1669
Alw21I GWGCWC 4 cut(s) 486, 560, 1145, 1650
Alw26I GTCTC 1 cut(s) 1337
Alw44I GTGCAC 1 cut(s) 482
AlwI GGATC 3 cut(s) 259, 299, 1534
AlwNI CAGNNNCTG 1 cut(s) 368
Aor13HI TCCGGA 1 cut(s) 1848
AoxI GGCC 4 cut(s) 329, 520, 1079, 1766
ApaLI GTGCAC 1 cut(s) 482
ApoI RAATTY 2 cut(s) 500, 1036
Asp700I GAANNNNTTC 3 cut(s) 423, 892, 1047
AspLEI GCGC 2 cut(s) 53, 1630
AspS9I GGNCC 3 cut(s) 56, 1080, 1540
AsuHPI GGTGA 6 cut(s) 29, 1002, 1177, 1521, 1766, 1798
AvaII GGWCC 2 cut(s) 56, 1540
AxyI CCTNAGG 1 cut(s) 1404
BaeGI GKGCMC 1 cut(s) 486
BanII GRGCYC 2 cut(s) 1145, 1650
BbsI GAAGAC 2 cut(s) 209, 416
Bbv12I GWGCWC 4 cut(s) 486, 560, 1145, 1650
BbvCI CCTCAGC 1 cut(s) 1206
BceAI ACGGC 1 cut(s) 1557
BcgI CGANNNNNNTGC 2 cut(s) 1199, 1233
BciT130I CCWGG 2 cut(s) 461, 1836
BcoDI GTCTC 1 cut(s) 1337
BfaI CTAG 2 cut(s) 812, 1394
BfmI CTRYAG 1 cut(s) 837
BfuAI ACCTGC 1 cut(s) 1525
Bme1390I CCNGG 2 cut(s) 461, 1836
Bme18I GGWCC 2 cut(s) 56, 1540
BmgBI CACGTC 1 cut(s) 647
BmgT120I GGNCC 3 cut(s) 56, 1080, 1540
BmiI GGNNCC 5 cut(s) 57, 1082, 1401, 1515, 1841
BmrFI CCNGG 2 cut(s) 461, 1836
BmrI ACTGGG 1 cut(s) 1316
BmuI ACTGGG 1 cut(s) 1316
BpiI GAAGAC 2 cut(s) 209, 416
BplI GAGNNNNNCTC 2 cut(s) 1189, 1221
Bpu10I CCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 3 cut(s) 60, 66, 90
Bsa29I ATCGAT 1 cut(s) 986
BsaHI GRCGYC 1 cut(s) 1832
BsaJI CCNNGG 9 cut(s) 382, 414, 459, 527, 773, 1013, 1578, 1763, 1835
BsaWI WCCGGW 1 cut(s) 1848
Bsc4I CCNNNNNNNGG 6 cut(s) 460, 613, 933, 1194, 1523, 1579
Bse1I ACTGG 3 cut(s) 938, 1256, 1322
Bse21I CCTNAGG 1 cut(s) 1404
Bse3DI GCAATG 2 cut(s) 205, 1217
BseAI TCCGGA 1 cut(s) 1848
BseBI CCWGG 2 cut(s) 461, 1836
BseCI ATCGAT 1 cut(s) 986
BseDI CCNNGG 9 cut(s) 382, 414, 459, 527, 773, 1013, 1578, 1763, 1835
BseGI GGATG 6 cut(s) 244, 677, 849, 979, 1240, 1857
BseLI CCNNNNNNNGG 6 cut(s) 460, 613, 933, 1194, 1523, 1579
BseMI GCAATG 2 cut(s) 205, 1217
BseMII CTCAG 9 cut(s) 266, 309, 458, 599, 1220, 1332, 1395, 1479, 1761
BseNI ACTGG 3 cut(s) 938, 1256, 1322
BseRI GAGGAG 3 cut(s) 303, 1194, 1421
BseSI GKGCMC 1 cut(s) 486
BseYI CCCAGC 1 cut(s) 587
BsgI GTGCAG 4 cut(s) 708, 1089, 1401, 1604
Bsh1236I CGCG 2 cut(s) 12, 53
BshFI GGCC 4 cut(s) 331, 522, 1081, 1768
BshVI ATCGAT 1 cut(s) 986
BsiHKAI GWGCWC 4 cut(s) 486, 560, 1145, 1650
BsiSI CCGG 1 cut(s) 1849
BslFI GGGAC 2 cut(s) 69, 605
BslI CCNNNNNNNGG 6 cut(s) 460, 613, 933, 1194, 1523, 1579
BsmAI GTCTC 1 cut(s) 1337
BsmFI GGGAC 2 cut(s) 69, 605
BsnI GGCC 4 cut(s) 331, 522, 1081, 1768
Bsp1286I GDGCHC 4 cut(s) 486, 560, 1145, 1650
Bsp13I TCCGGA 1 cut(s) 1848
Bsp143I GATC 4 cut(s) 264, 304, 1375, 1526
Bsp19I CCATGG 3 cut(s) 382, 1013, 1763
BspACI CCGC 8 cut(s) 12, 53, 224, 431, 1350, 1397, 1520, 1693
BspANI GGCC 4 cut(s) 331, 522, 1081, 1768
BspCNI CTCAG 9 cut(s) 265, 310, 457, 600, 1219, 1333, 1396, 1478, 1762
BspDI ATCGAT 1 cut(s) 986
BspEI TCCGGA 1 cut(s) 1848
BspFNI CGCG 2 cut(s) 12, 53
BspLI GGNNCC 5 cut(s) 57, 1082, 1401, 1515, 1841
BspMI ACCTGC 1 cut(s) 1525
BspPI GGATC 3 cut(s) 259, 299, 1534
BsrDI GCAATG 2 cut(s) 205, 1217
BsrI ACTGG 3 cut(s) 938, 1256, 1322
BssECI CCNNGG 9 cut(s) 382, 414, 459, 527, 773, 1013, 1578, 1763, 1835
BssMI GATC 4 cut(s) 264, 304, 1375, 1526
BssNAI GTATAC 1 cut(s) 763
BssNI GRCGYC 1 cut(s) 1832
BssT1I CCWWGG 5 cut(s) 382, 773, 1013, 1578, 1763
Bst1107I GTATAC 1 cut(s) 763
Bst2UI CCWGG 2 cut(s) 461, 1836
Bst4CI ACNGT 4 cut(s) 488, 904, 1029, 1194
Bst6I CTCTTC 2 cut(s) 1494, 1784
BstACI GRCGYC 1 cut(s) 1832
BstAPI GCANNNNNTGC 1 cut(s) 731
BstC8I GCNNGC 4 cut(s) 717, 727, 981, 1550
BstDSI CCRYGG 5 cut(s) 382, 414, 527, 1013, 1763
BstF5I GGATG 6 cut(s) 244, 677, 849, 979, 1240, 1857
BstFNI CGCG 2 cut(s) 12, 53
BstHHI GCGC 2 cut(s) 53, 1630
BstKTI GATC 4 cut(s) 267, 307, 1378, 1529
BstMAI GTCTC 1 cut(s) 1337
BstMBI GATC 4 cut(s) 264, 304, 1375, 1526
BstMWI GCNNNNNNNGC 3 cut(s) 731, 1336, 1554
BstNI CCWGG 2 cut(s) 461, 1836
BstNSI RCATGY 1 cut(s) 413
BstSCI CCNGG 2 cut(s) 459, 1834
BstSFI CTRYAG 1 cut(s) 837
BstSLI GKGCMC 1 cut(s) 486
BstUI CGCG 2 cut(s) 12, 53
BstV2I GAAGAC 2 cut(s) 209, 416
BstZ17I GTATAC 1 cut(s) 763
Bsu15I ATCGAT 1 cut(s) 986
Bsu36I CCTNAGG 1 cut(s) 1404
BsuRI GGCC 4 cut(s) 331, 522, 1081, 1768
BsuTUI ATCGAT 1 cut(s) 986
BtgI CCRYGG 5 cut(s) 382, 414, 527, 1013, 1763
BtgZI GCGATG 1 cut(s) 967
BtrI CACGTC 1 cut(s) 647
BtsCI GGATG 6 cut(s) 244, 677, 849, 979, 1240, 1857
BtsIMutI CAGTG 4 cut(s) 500, 931, 1199, 1298
BveI ACCTGC 1 cut(s) 1525
Cac8I GCNNGC 4 cut(s) 717, 727, 981, 1550
CaiI CAGNNNCTG 1 cut(s) 368
CfoI GCGC 2 cut(s) 53, 1630
Cfr13I GGNCC 3 cut(s) 56, 1080, 1540
ClaI ATCGAT 1 cut(s) 986
CseI GACGC 4 cut(s) 120, 354, 1162, 1840
Csp6I GTAC 4 cut(s) 28, 1575, 1598, 1639
CviQI GTAC 4 cut(s) 28, 1575, 1598, 1639
DpnI GATC 4 cut(s) 266, 306, 1377, 1528
DpnII GATC 4 cut(s) 264, 304, 1375, 1526
DraI TTTAAA 1 cut(s) 1623
Eam1104I CTCTTC 2 cut(s) 1494, 1784
EarI CTCTTC 2 cut(s) 1494, 1784
EciI GGCGGA 1 cut(s) 239
Ecl136II GAGCTC 2 cut(s) 1143, 1648
Eco130I CCWWGG 5 cut(s) 382, 773, 1013, 1578, 1763
Eco24I GRGCYC 2 cut(s) 1145, 1650
Eco47I GGWCC 2 cut(s) 56, 1540
Eco53kI GAGCTC 2 cut(s) 1143, 1648
Eco57I CTGAAG 3 cut(s) 203, 300, 1088
Eco81I CCTNAGG 1 cut(s) 1404
EcoICRI GAGCTC 2 cut(s) 1143, 1648
EcoO109I RGGNCCY 2 cut(s) 56, 1080
EcoRII CCWGG 2 cut(s) 459, 1834
EcoT14I CCWWGG 5 cut(s) 382, 773, 1013, 1578, 1763
EcoT22I ATGCAT 1 cut(s) 705
EcoT38I GRGCYC 2 cut(s) 1145, 1650
ErhI CCWWGG 5 cut(s) 382, 773, 1013, 1578, 1763
FaqI GGGAC 2 cut(s) 69, 605
FauI CCCGC 1 cut(s) 46
FauNDI CATATG 1 cut(s) 1802
FblI GTMKAC 2 cut(s) 147, 762
FokI GGATG 6 cut(s) 251, 664, 856, 986, 1247, 1864
FriOI GRGCYC 2 cut(s) 1145, 1650
FspBI CTAG 2 cut(s) 812, 1394
GlaI GCGC 2 cut(s) 52, 1629
GsaI CCCAGC 1 cut(s) 591
HaeIII GGCC 4 cut(s) 331, 522, 1081, 1768
HapII CCGG 1 cut(s) 1849
HgaI GACGC 4 cut(s) 120, 354, 1162, 1840
HhaI GCGC 2 cut(s) 53, 1630
Hin1I GRCGYC 1 cut(s) 1832
Hin6I GCGC 2 cut(s) 51, 1628
HinP1I GCGC 2 cut(s) 51, 1628
HincII GTYRAC 2 cut(s) 135, 148
HindII GTYRAC 2 cut(s) 135, 148
HinfI GANTC 8 cut(s) 190, 298, 442, 639, 875, 941, 1292, 1696
HpaII CCGG 1 cut(s) 1849
HphI GGTGA 6 cut(s) 29, 1002, 1177, 1521, 1766, 1798
Hpy166II GTNNAC 6 cut(s) 135, 148, 340, 484, 763, 1722
Hpy188I TCNGA 9 cut(s) 255, 370, 644, 1042, 1249, 1380, 1468, 1480, 1498
Hpy188III TCNNGA 9 cut(s) 83, 302, 317, 607, 812, 993, 1220, 1403, 1849
Hpy8I GTNNAC 6 cut(s) 135, 148, 340, 484, 763, 1722
HpyAV CCTTC 1 cut(s) 684
HpyCH4III ACNGT 4 cut(s) 488, 904, 1029, 1194
HpyCH4IV ACGT 3 cut(s) 210, 646, 1047
HpyF10VI GCNNNNNNNGC 3 cut(s) 731, 1336, 1554
HpySE526I ACGT 3 cut(s) 210, 646, 1047
Hsp92I GRCGYC 1 cut(s) 1832
HspAI GCGC 2 cut(s) 51, 1628
Kpn2I TCCGGA 1 cut(s) 1848
Kzo9I GATC 4 cut(s) 264, 304, 1375, 1526
LmnI GCTCC 3 cut(s) 555, 929, 1140
MaeI CTAG 2 cut(s) 812, 1394
MaeII ACGT 3 cut(s) 210, 646, 1047
MaeIII GTNAC 2 cut(s) 110, 565
MalI GATC 4 cut(s) 266, 306, 1377, 1528
MboI GATC 4 cut(s) 264, 304, 1375, 1526
MhlI GDGCHC 4 cut(s) 486, 560, 1145, 1650
MluCI AATT 7 cut(s) 44, 500, 785, 1020, 1036, 1354, 1371
MlyI GAGTC 6 cut(s) 307, 436, 648, 935, 1286, 1705
MmeI TCCRAC 2 cut(s) 253, 616
Mph1103I ATGCAT 1 cut(s) 705
MroI TCCGGA 1 cut(s) 1848
MroXI GAANNNNTTC 3 cut(s) 423, 892, 1047
MseI TTAA 4 cut(s) 152, 852, 1622, 1859
MslI CAYNNNNRTG 3 cut(s) 972, 1177, 1221
MspA1I CMGCKG 1 cut(s) 433
MspI CCGG 1 cut(s) 1849
MspR9I CCNGG 2 cut(s) 461, 1836
MvaI CCWGG 2 cut(s) 461, 1836
MvnI CGCG 2 cut(s) 12, 53
MwoI GCNNNNNNNGC 3 cut(s) 731, 1336, 1554
NcoI CCATGG 3 cut(s) 382, 1013, 1763
NdeI CATATG 1 cut(s) 1802
NdeII GATC 4 cut(s) 264, 304, 1375, 1526
NlaIV GGNNCC 5 cut(s) 57, 1082, 1401, 1515, 1841
NmuCI GTSAC 1 cut(s) 110
NsiI ATGCAT 1 cut(s) 705
NspI RCATGY 1 cut(s) 413
OliI CACNNNNGTG 1 cut(s) 1177
PdmI GAANNNNTTC 3 cut(s) 423, 892, 1047
PfeI GAWTC 2 cut(s) 190, 875
PflFI GACNNNGTC 1 cut(s) 364
PleI GAGTC 6 cut(s) 306, 436, 647, 935, 1286, 1704
PpsI GAGTC 6 cut(s) 306, 436, 647, 935, 1286, 1704
PpuMI RGGWCCY 1 cut(s) 56
Psp124BI GAGCTC 2 cut(s) 1145, 1650
Psp1406I AACGTT 2 cut(s) 210, 1047
Psp5II RGGWCCY 1 cut(s) 56
Psp6I CCWGG 2 cut(s) 459, 1834
PspFI CCCAGC 1 cut(s) 587
PspGI CCWGG 2 cut(s) 459, 1834
PspN4I GGNNCC 5 cut(s) 57, 1082, 1401, 1515, 1841
PspPI GGNCC 3 cut(s) 56, 1080, 1540
PspPPI RGGWCCY 1 cut(s) 56
PstNI CAGNNNCTG 1 cut(s) 368
PsyI GACNNNGTC 1 cut(s) 364
RsaI GTAC 4 cut(s) 29, 1576, 1599, 1640
RsaNI GTAC 4 cut(s) 28, 1575, 1598, 1639
RseI CAYNNNNRTG 3 cut(s) 972, 1177, 1221
SacI GAGCTC 2 cut(s) 1145, 1650
SalI GTCGAC 1 cut(s) 146
SaqAI TTAA 4 cut(s) 152, 852, 1622, 1859
Sau3AI GATC 4 cut(s) 264, 304, 1375, 1526
Sau96I GGNCC 3 cut(s) 56, 1080, 1540
SchI GAGTC 6 cut(s) 307, 436, 648, 935, 1286, 1705
ScrFI CCNGG 2 cut(s) 461, 1836
SduI GDGCHC 4 cut(s) 486, 560, 1145, 1650
SfcI CTRYAG 1 cut(s) 837
SinI GGWCC 2 cut(s) 56, 1540
SmiI ATTTAAAT 1 cut(s) 1623
SmiMI CAYNNNNRTG 3 cut(s) 972, 1177, 1221
SmlI CTYRAG 3 cut(s) 75, 81, 105
SmoI CTYRAG 3 cut(s) 75, 81, 105
Sse9I AATT 7 cut(s) 44, 500, 785, 1020, 1036, 1354, 1371
SsiI CCGC 8 cut(s) 12, 53, 224, 431, 1350, 1397, 1520, 1693
SspI AATATT 1 cut(s) 1797
SspMI CTAG 2 cut(s) 812, 1394
SstI GAGCTC 2 cut(s) 1145, 1650
StyD4I CCNGG 2 cut(s) 459, 1834
StyI CCWWGG 5 cut(s) 382, 773, 1013, 1578, 1763
SwaI ATTTAAAT 1 cut(s) 1623
TaaI ACNGT 4 cut(s) 488, 904, 1029, 1194
TaiI ACGT 3 cut(s) 213, 649, 1050
TaqI TCGA 5 cut(s) 126, 147, 986, 1326, 1808
TasI AATT 7 cut(s) 44, 500, 785, 1020, 1036, 1354, 1371
TfiI GAWTC 2 cut(s) 190, 875
Tru1I TTAA 4 cut(s) 152, 852, 1622, 1859
Tru9I TTAA 4 cut(s) 152, 852, 1622, 1859
TscAI CASTG 4 cut(s) 500, 938, 1199, 1305
TseFI GTSAC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 110
TspDTI ATGAA 8 cut(s) 176, 221, 303, 666, 745, 778, 956, 1789
TspGWI ACGGA 5 cut(s) 251, 431, 544, 636, 670
TspRI CASTG 4 cut(s) 500, 938, 1199, 1305
Tth111I GACNNNGTC 1 cut(s) 364
VneI GTGCAC 1 cut(s) 482
VpaK11BI GGWCC 2 cut(s) 56, 1540
XapI RAATTY 2 cut(s) 500, 1036
XbaI TCTAGA 1 cut(s) 811
XceI RCATGY 1 cut(s) 413
XcmI CCANNNNNNNNNTGG 1 cut(s) 1450
XmiI GTMKAC 2 cut(s) 147, 762
XmnI GAANNNNTTC 3 cut(s) 423, 892, 1047
XspI CTAG 2 cut(s) 812, 1394
Zsp2I ATGCAT 1 cut(s) 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.