Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000194.1

Orthogroup ID

OG0009840

Physical Location & Seq

Genomic Coordinates Forward (+)

98384 .. 106655

Gene Structure 8272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000194.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

atgatgacgaatcaagcagggtcgtattcgcagccggaaggaggagatgttctgtatccggagctatggaaggcctgcgcgggcccactcgtggaagtccctcgccataaggagagagtctactactttccacaagggcacatggagcaattagaggcatcaacaacaacaaatccggaagtgaatcaggggattccgaggtttaatcttccctcgaagattctctgtcgcgtcatgcacgttcagctactggctgaacaagaaacagatgaggtttatgcgcaaattactttaattcctgaagcaaatcaaaccaccaaacctactagtcctgatgagtgtccttccgaacctgaaagaccaaaggtttacccattctgcaaggttcttactgcatccgatacgagtacccatggtgggttttctgttctacgcaaacacgctactgaatgccttcctccactggacaagactcaagcaaccccaactcaggaattggttgccaaagatcttcatggttatgagtggcgattcaagcacattttcagaggttcaccacggagacacttgcttacaacaggatggagtacttttgttacttctaagaggttaagtgccggggattcctttgtatttctcagaggcgaaagcggggacttacgtgttggaattaggcgtcttgctcgtcaacagagcagcatgccatcatctgtgatttcaagtcaaagcatgcatgtaggggtgcttgctactgcatcacatgctgttgcaacccaaacactctttgtagtgtattataagccaaggacaagtcagttcattattagtttgaataagtatttggaggctgttaacaataagttctcagttggaatgagattcaagatgaggtttgagggggaggacgctccagagagaaggttttcaggcactataattggtcttgaggatatatctcctcattgggcagattcagaatggcgatcccttaaagttcaatgggatgagtctgcatccattcccagacctgacagggtctcgccctgggagatagaaccttatgtggcttccatacctgcgagcctttctccatccactgttttgaagaacaaaaggcctcggctactccctgaaatcccagctcctgataccgttgttttgaagaacaaaaggcctcggctactccctgaaatcccagctcctgataccgcgagttcaataacgtggcatgatgtgacacaattgagtggtgctgctgaaggccagagaagtgaaaatcatgtttctttgaatcatcagcaggcagacattatcagcagtagcacttgtatctcgaggactaagactgatgggggctggctatcttcacctacggtggaggatagtaaaagtggtcctgcttggccacgtttctctggatattcaactccaacttcatcaaagcctaaaaatgacttgatactggaccatgttgaaaagaggaagaaaactgagacaggtgctagttgcctaatttttggtgtagattttagcagtcatcttaacagctcccattcagtggagaagccacccccacaaccaattatagcatctactagagccactgaaggacaagttagtatctcagtggaagctgagtctgaccagaaatctgacctttcgaaggcttctaaagaaagcaaagctcagtttcaagtatcaccgaaagagacactgagcaagcagagtagctctgcatccactaggagtcgcgtcaaggttcaaatgcagggaatagctgttggtcgagcagtggacttgacaatgctggaagggtatgatcaacttatagttgaactggaggagatgtttgatatcaagggacagatcggcccacgtaacaagtgggaaattgtgttcactgatgatgaaggagatatgatgcttgctggtgacgacccgtggttggaattctgtaacatggtgagaagaatctttatatgttcaagtcaggacgtgaagaaaattagtgcagggagaaaacgtctaagtatgtcttcactagaagttgaagggacaaagccatggaaagattgtctcagcaacaaggaggaagaggcaaaagggcaccaccgagaggaacgacttgaggagattgcgcgtgacggccacgaggcccttgtagaggccgtcgagcatgaagaggaggatcatcacggcctctgcgccggctgcgtagcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

740

Amino Acids

82.43

Weight (kDa)

6.19

Isoelectric Point (pI)

52.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009840)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23980 AT4G23980
fragaria_vesca	FvH4_5g11690 FvH4_5g11690 FvH4_5g11690 FvH4_5g11690 FvH4_5g11690
malus_domestica	MD06G1111100.v1.1 MD14G1131900.v1.1
prunus_persica	Prupe.5G123400_v2.0.a1
pyrus_communis	pycom06g10410
rosa_chinensis	RchiOBHm_Chr7g0186081
rosa_laevigata	RLG00000004866
rosa_multiflora	Rmu_sc0000194.1_g000026
rosa_roxburghii	Rroxscaffold_3G00268450
rosa_rugosa	Rorug06G0472100
rosa_samantha	Rh7AG069800 Rh7BG085600 Rh7CG078500 Rh7DG078500
rosa_wichuraiana	Rw7G006530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	798
Acc16I	TGCGCA	1 cut(s)	282
Acc36I	ACCTGC	1 cut(s)	1084
AccB1I	GGYRCC	1 cut(s)	2106
AccB7I	CCANNNNNTGG	1 cut(s)	1558
AccI	GTMKAC	1 cut(s)	120
AccII	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
AccIII	TCCGGA	2 cut(s)	58, 175
AciI	CCGC	3 cut(s)	80, 651, 1209
AclWI	GGATC	2 cut(s)	978, 2196
AcoI	YGGCCR	2 cut(s)	1403, 2146
AcsI	RAATTY	1 cut(s)	1949
AcuI	CTGAAG	3 cut(s)	321, 1278, 1626
AcyI	GRCGYC	1 cut(s)	676
AfaI	GTAC	2 cut(s)	409, 589
AfiI	CCNNNNNNNGG	9 cut(s)	41, 91, 417, 490, 1558, 1663, 1945, 2116, 2164
AflIII	ACRYGT	1 cut(s)	661
AhlI	ACTAGT	1 cut(s)	326
AjiI	CACGTC	1 cut(s)	1996
AjnI	CCWGG	1 cut(s)	1043
AjuI	GAANNNNNNNTTGG	2 cut(s)	824, 856
AloI	GAACNNNNNNTCC	4 cut(s)	33, 65, 1880, 1912
AluBI	AGCT	9 cut(s)	64, 247, 1142, 1199, 1548, 1634, 1685, 1731, 1778
AluI	AGCT	9 cut(s)	64, 247, 1142, 1199, 1548, 1634, 1685, 1731, 1778
Alw26I	GTCTC	5 cut(s)	556, 1042, 1487, 1703, 2081
AlwI	GGATC	2 cut(s)	978, 2196
AlwNI	CAGNNNCTG	3 cut(s)	250, 1145, 1202
Ama87I	CYCGRG	1 cut(s)	1333
Aor13HI	TCCGGA	2 cut(s)	58, 175
ApaI	GGGCCC	1 cut(s)	86
ApeKI	GCWGC	4 cut(s)	31, 696, 1253, 2211
ApoI	RAATTY	1 cut(s)	1949
Asp700I	GAANNNNTTC	2 cut(s)	453, 922
AspLEI	GCGC	4 cut(s)	80, 283, 2140, 2207
AspS9I	GGNCC	6 cut(s)	82, 83, 1394, 1465, 1871, 2155
AsuC2I	CCSGG	1 cut(s)	619
AsuHPI	GGTGA	5 cut(s)	546, 1359, 1692, 1943, 1975
AsuII	TTCGAA	1 cut(s)	1661
AvaI	CYCGRG	1 cut(s)	1333
AvaII	GGWCC	2 cut(s)	1394, 1465
BaeGI	GKGCMC	3 cut(s)	86, 141, 2109
BaeI	ACNNNNGTAYC	2 cut(s)	1140, 1173
BalI	TGGCCA	1 cut(s)	1405
BanI	GGYRCC	1 cut(s)	2106
BanII	GRGCYC	1 cut(s)	86
BauI	CACGAG	2 cut(s)	89, 2150
BbsI	GAAGAC	1 cut(s)	2028
BbvI	GCAGC	4 cut(s)	43, 708, 1240, 2198
BccI	CCATC	4 cut(s)	576, 712, 1099, 1343
BceAI	ACGGC	3 cut(s)	2153, 2161, 2212
BciT130I	CCWGG	1 cut(s)	1045
BciVI	GTATCC	1 cut(s)	66
BclI	TGATCA	1 cut(s)	1819
BcnI	CCSGG	1 cut(s)	619
BcoDI	GTCTC	5 cut(s)	556, 1042, 1487, 1703, 2081
BcuI	ACTAGT	1 cut(s)	326
BfaI	CTAG	6 cut(s)	327, 1503, 1596, 1743, 2042, 2221
BfuAI	ACCTGC	1 cut(s)	1084
BfuI	GTATCC	1 cut(s)	66
BglII	AGATCT	1 cut(s)	508
BisI	GCNGC	4 cut(s)	32, 697, 1254, 2212
BlsI	GCNGC	4 cut(s)	33, 698, 1255, 2213
BmcAI	AGTACT	1 cut(s)	589
Bme1390I	CCNGG	2 cut(s)	619, 1045
Bme18I	GGWCC	2 cut(s)	1394, 1465
BmeT110I	CYCGRG	1 cut(s)	1333
BmgBI	CACGTC	1 cut(s)	1996
BmgT120I	GGNCC	6 cut(s)	82, 83, 1394, 1465, 1871, 2155
BmiI	GGNNCC	2 cut(s)	84, 2108
BmrFI	CCNGG	2 cut(s)	619, 1045
BmsI	GCATC	7 cut(s)	167, 404, 764, 1022, 1598, 1745, 1911
BpiI	GAAGAC	1 cut(s)	2028
BplI	GAGNNNNNCTC	2 cut(s)	1072, 1104
BpmI	CTGGAG	2 cut(s)	894, 1859
Bpu14I	TTCGAA	1 cut(s)	1661
BpuEI	CTTGAG	3 cut(s)	459, 965, 2147
BpuMI	CCSGG	1 cut(s)	619
BsaAI	YACGTR	2 cut(s)	662, 1877
BsaHI	GRCGYC	1 cut(s)	676
BsaI	GGTCTC	1 cut(s)	1042
BsaWI	WCCGGW	2 cut(s)	58, 175
BsaXI	ACNNNNNCTCC	6 cut(s)	33, 63, 1832, 1862, 2008, 2038
Bsc4I	CCNNNNNNNGG	9 cut(s)	41, 91, 417, 490, 1558, 1663, 1945, 2116, 2164
Bse118I	RCCGGY	1 cut(s)	2207
Bse1I	ACTGG	4 cut(s)	255, 468, 1467, 1842
BseAI	TCCGGA	2 cut(s)	58, 175
BseBI	CCWGG	1 cut(s)	1045
BseGI	GGATG	6 cut(s)	395, 587, 1009, 1013, 1091, 1736
BseLI	CCNNNNNNNGG	9 cut(s)	41, 91, 417, 490, 1558, 1663, 1945, 2116, 2164
BseMII	CTCAG	9 cut(s)	503, 652, 879, 1482, 1626, 1638, 1700, 1706, 2092
BseNI	ACTGG	4 cut(s)	255, 468, 1467, 1842
BseRI	GAGGAG	5 cut(s)	57, 948, 1856, 2144, 2198
BseSI	GKGCMC	3 cut(s)	86, 141, 2109
BseXI	GCAGC	4 cut(s)	43, 708, 1240, 2198
BseYI	CCCAGC	2 cut(s)	1138, 1195
BsgI	GTGCAG	1 cut(s)	2031
Bsh1236I	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
BshNI	GGYRCC	1 cut(s)	2106
BsiHKCI	CYCGRG	1 cut(s)	1333
BsiSI	CCGG	5 cut(s)	35, 59, 176, 618, 2208
BslFI	GGGAC	4 cut(s)	83, 668, 1875, 2068
BslI	CCNNNNNNNGG	9 cut(s)	41, 91, 417, 490, 1558, 1663, 1945, 2116, 2164
BsmAI	GTCTC	5 cut(s)	556, 1042, 1487, 1703, 2081
BsmFI	GGGAC	4 cut(s)	83, 668, 1875, 2068
BsmI	GAATGC	1 cut(s)	455
Bso31I	GGTCTC	1 cut(s)	1042
BsoBI	CYCGRG	1 cut(s)	1333
Bsp119I	TTCGAA	1 cut(s)	1661
Bsp120I	GGGCCC	1 cut(s)	82
Bsp1286I	GDGCHC	3 cut(s)	86, 141, 2109
Bsp13I	TCCGGA	2 cut(s)	58, 175
Bsp143I	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
Bsp19I	CCATGG	2 cut(s)	412, 2063
BspACI	CCGC	3 cut(s)	80, 651, 1209
BspCNI	CTCAG	9 cut(s)	502, 651, 878, 1483, 1627, 1637, 1699, 1707, 2091
BspEI	TCCGGA	2 cut(s)	58, 175
BspFNI	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
BspLI	GGNNCC	2 cut(s)	84, 2108
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	2 cut(s)	978, 2196
BspT104I	TTCGAA	1 cut(s)	1661
BspT107I	GGYRCC	1 cut(s)	2106
BspTNI	GGTCTC	1 cut(s)	1042
BsrFI	RCCGGY	1 cut(s)	2207
BsrI	ACTGG	4 cut(s)	255, 468, 1467, 1842
BssAI	RCCGGY	1 cut(s)	2207
BssMI	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
BssNI	GRCGYC	1 cut(s)	676
BssSI	CACGAG	2 cut(s)	89, 2150
BssT1I	CCWWGG	3 cut(s)	412, 803, 2063
Bst2BI	CACGAG	2 cut(s)	89, 2150
Bst2UI	CCWGG	1 cut(s)	1045
Bst4CI	ACNGT	3 cut(s)	1099, 1153, 1375
Bst6I	CTCTTC	2 cut(s)	2088, 2175
BstACI	GRCGYC	1 cut(s)	676
BstAPI	GCANNNNNTGC	1 cut(s)	761
BstBAI	YACGTR	2 cut(s)	662, 1877
BstBI	TTCGAA	1 cut(s)	1661
BstDSI	CCRYGG	4 cut(s)	412, 557, 1940, 2063
BstENI	CCTNNNNNAGG	2 cut(s)	1661, 2162
BstF5I	GGATG	6 cut(s)	395, 587, 1009, 1013, 1091, 1736
BstFNI	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
BstHHI	GCGC	4 cut(s)	80, 283, 2140, 2207
BstKTI	GATC	5 cut(s)	511, 986, 1822, 1869, 2191
BstMAI	GTCTC	5 cut(s)	556, 1042, 1487, 1703, 2081
BstMBI	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
BstMWI	GCNNNNNNNGC	5 cut(s)	145, 244, 535, 761, 2211
BstNI	CCWGG	1 cut(s)	1045
BstNSI	RCATGY	4 cut(s)	703, 733, 737, 764
BstSCI	CCNGG	2 cut(s)	617, 1043
BstSLI	GKGCMC	3 cut(s)	86, 141, 2109
BstUI	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
BstV1I	GCAGC	4 cut(s)	43, 708, 1240, 2198
BstV2I	GAAGAC	1 cut(s)	2028
BstX2I	RGATCY	1 cut(s)	508
BstYI	RGATCY	1 cut(s)	508
BsuI	GTATCC	1 cut(s)	66
BtgI	CCRYGG	4 cut(s)	412, 557, 1940, 2063
BtrI	CACGTC	1 cut(s)	1996
BtsCI	GGATG	6 cut(s)	395, 587, 1009, 1013, 1091, 1736
BtsI	GCAGTG	1 cut(s)	1797
BtsIMutI	CAGTG	8 cut(s)	461, 1095, 1563, 1602, 1632, 1712, 1797, 1899
BveI	ACCTGC	1 cut(s)	1084
CaiI	CAGNNNCTG	3 cut(s)	250, 1145, 1202
CfoI	GCGC	4 cut(s)	80, 283, 2140, 2207
Cfr10I	RCCGGY	1 cut(s)	2207
Cfr13I	GGNCC	6 cut(s)	82, 83, 1394, 1465, 1871, 2155
CseI	GACGC	4 cut(s)	220, 665, 914, 1741
Csp6I	GTAC	2 cut(s)	408, 588
CviQI	GTAC	2 cut(s)	408, 588
DpnI	GATC	5 cut(s)	510, 985, 1821, 1868, 2190
DpnII	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
EaeI	YGGCCR	2 cut(s)	1403, 2146
Eam1104I	CTCTTC	2 cut(s)	2088, 2175
EarI	CTCTTC	2 cut(s)	2088, 2175
Eco130I	CCWWGG	3 cut(s)	412, 803, 2063
Eco147I	AGGCCT	3 cut(s)	74, 1117, 1174
Eco24I	GRGCYC	1 cut(s)	86
Eco31I	GGTCTC	1 cut(s)	1042
Eco32I	GATATC	1 cut(s)	1855
Eco47I	GGWCC	2 cut(s)	1394, 1465
Eco57I	CTGAAG	3 cut(s)	321, 1278, 1626
Eco88I	CYCGRG	1 cut(s)	1333
EcoNI	CCTNNNNNAGG	2 cut(s)	1661, 2162
EcoO109I	RGGNCCY	1 cut(s)	2155
EcoRI	GAATTC	1 cut(s)	1949
EcoRII	CCWGG	1 cut(s)	1043
EcoRV	GATATC	1 cut(s)	1855
EcoT14I	CCWWGG	3 cut(s)	412, 803, 2063
EcoT22I	ATGCAT	1 cut(s)	735
EcoT38I	GRGCYC	1 cut(s)	86
ErhI	CCWWGG	3 cut(s)	412, 803, 2063
FalI	AAGNNNNNCTT	2 cut(s)	2020, 2052
FaqI	GGGAC	4 cut(s)	83, 668, 1875, 2068
FauI	CCCGC	2 cut(s)	73, 644
FbaI	TGATCA	1 cut(s)	1819
FblI	GTMKAC	1 cut(s)	120
Fnu4HI	GCNGC	4 cut(s)	32, 697, 1254, 2212
FokI	GGATG	6 cut(s)	382, 594, 1000, 1016, 1078, 1723
FriOI	GRGCYC	1 cut(s)	86
Fsp4HI	GCNGC	4 cut(s)	32, 697, 1254, 2212
FspBI	CTAG	6 cut(s)	327, 1503, 1596, 1743, 2042, 2221
FspI	TGCGCA	1 cut(s)	282
GlaI	GCGC	4 cut(s)	79, 282, 2139, 2206
GluI	GCNGC	4 cut(s)	32, 697, 1254, 2212
GsaI	CCCAGC	2 cut(s)	1142, 1199
GsuI	CTGGAG	2 cut(s)	894, 1859
HapII	CCGG	5 cut(s)	35, 59, 176, 618, 2208
HgaI	GACGC	4 cut(s)	220, 665, 914, 1741
HhaI	GCGC	4 cut(s)	80, 283, 2140, 2207
Hin1I	GRCGYC	1 cut(s)	676
Hin6I	GCGC	4 cut(s)	78, 281, 2138, 2205
HinP1I	GCGC	4 cut(s)	78, 281, 2138, 2205
HincII	GTYRAC	2 cut(s)	689, 853
HindII	GTYRAC	2 cut(s)	689, 853
HpaI	GTTAAC	1 cut(s)	853
HpaII	CCGG	5 cut(s)	35, 59, 176, 618, 2208
HphI	GGTGA	5 cut(s)	546, 1359, 1692, 1943, 1975
Hpy166II	GTNNAC	7 cut(s)	121, 370, 554, 689, 853, 1795, 1899
Hpy188I	TCNGA	8 cut(s)	198, 349, 400, 548, 641, 976, 1642, 1654
Hpy8I	GTNNAC	7 cut(s)	121, 370, 554, 689, 853, 1795, 1899
Hpy99I	CGWCG	1 cut(s)	2174
HpyCH4III	ACNGT	3 cut(s)	1099, 1153, 1375
HpyCH4IV	ACGT	7 cut(s)	240, 661, 1223, 1408, 1876, 1995, 2023
HpyF10VI	GCNNNNNNNGC	5 cut(s)	145, 244, 535, 761, 2211
HpySE526I	ACGT	7 cut(s)	240, 661, 1223, 1408, 1876, 1995, 2023
Hsp92I	GRCGYC	1 cut(s)	676
HspAI	GCGC	4 cut(s)	78, 281, 2138, 2205
Kpn2I	TCCGGA	2 cut(s)	58, 175
KroI	GCCGGC	1 cut(s)	2207
KroNI	GCCGGC	1 cut(s)	2209
Ksp22I	TGATCA	1 cut(s)	1819
KspAI	GTTAAC	1 cut(s)	853
Kzo9I	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
LmnI	GCTCC	6 cut(s)	61, 145, 913, 1147, 1204, 1553
Lsp1109I	GCAGC	4 cut(s)	43, 708, 1240, 2198
LweI	GCATC	7 cut(s)	167, 404, 764, 1022, 1598, 1745, 1911
MaeI	CTAG	6 cut(s)	327, 1503, 1596, 1743, 2042, 2221
MaeII	ACGT	7 cut(s)	240, 661, 1223, 1408, 1876, 1995, 2023
MaeIII	GTNAC	6 cut(s)	595, 1234, 1877, 1931, 1955, 2141
MalI	GATC	5 cut(s)	510, 985, 1821, 1868, 2190
MboI	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
MfeI	CAATTG	1 cut(s)	1241
MflI	RGATCY	1 cut(s)	508
MhlI	GDGCHC	3 cut(s)	86, 141, 2109
MlsI	TGGCCA	1 cut(s)	1405
MluNI	TGGCCA	1 cut(s)	1405
MlyI	GAGTC	5 cut(s)	126, 466, 1016, 1646, 1756
MmeI	TCCRAC	4 cut(s)	646, 850, 1454, 1926
Mox20I	TGGCCA	1 cut(s)	1405
Mph1103I	ATGCAT	1 cut(s)	735
MroI	TCCGGA	2 cut(s)	58, 175
MroNI	GCCGGC	1 cut(s)	2207
MroXI	GAANNNNTTC	2 cut(s)	453, 922
MscI	TGGCCA	1 cut(s)	1405
MseI	TTAA	6 cut(s)	204, 293, 611, 852, 990, 1542
MslI	CAYNNNNRTG	1 cut(s)	519
Msp20I	TGGCCA	1 cut(s)	1405
MspI	CCGG	5 cut(s)	35, 59, 176, 618, 2208
MspR9I	CCNGG	2 cut(s)	619, 1045
MunI	CAATTG	1 cut(s)	1241
Mva1269I	GAATGC	1 cut(s)	455
MvaI	CCWGG	1 cut(s)	1045
MvnI	CGCG	5 cut(s)	80, 231, 1211, 1752, 2140
MwoI	GCNNNNNNNGC	5 cut(s)	145, 244, 535, 761, 2211
NaeI	GCCGGC	1 cut(s)	2209
NciI	CCSGG	1 cut(s)	619
NcoI	CCATGG	2 cut(s)	412, 2063
NdeII	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
NgoMIV	GCCGGC	1 cut(s)	2207
NlaIV	GGNNCC	2 cut(s)	84, 2108
NmeAIII	GCCGAG	2 cut(s)	1099, 1156
NmuCI	GTSAC	3 cut(s)	1234, 1931, 2141
NsbI	TGCGCA	1 cut(s)	282
NsiI	ATGCAT	1 cut(s)	735
NspI	RCATGY	4 cut(s)	703, 733, 737, 764
NspV	TTCGAA	1 cut(s)	1661
PaeI	GCATGC	2 cut(s)	703, 733
PaeR7I	CTCGAG	1 cut(s)	1333
PasI	CCCWGGG	1 cut(s)	1044
PceI	AGGCCT	3 cut(s)	74, 1117, 1174
PctI	GAATGC	1 cut(s)	455
PdiI	GCCGGC	1 cut(s)	2209
PdmI	GAANNNNTTC	2 cut(s)	453, 922
PflFI	GACNNNGTC	1 cut(s)	1034
PflMI	CCANNNNNTGG	1 cut(s)	1558
PkrI	GCNGC	4 cut(s)	33, 698, 1255, 2213
PleI	GAGTC	5 cut(s)	125, 466, 1015, 1645, 1755
PpsI	GAGTC	5 cut(s)	125, 466, 1015, 1645, 1755
Ppu21I	YACGTR	2 cut(s)	662, 1877
PsiI	TTATAA	1 cut(s)	798
Psp6I	CCWGG	1 cut(s)	1043
PspFI	CCCAGC	2 cut(s)	1138, 1195
PspGI	CCWGG	1 cut(s)	1043
PspN4I	GGNNCC	2 cut(s)	84, 2108
PspOMI	GGGCCC	1 cut(s)	82
PspPI	GGNCC	6 cut(s)	82, 83, 1394, 1465, 1871, 2155
PstNI	CAGNNNCTG	3 cut(s)	250, 1145, 1202
PsuI	RGATCY	1 cut(s)	508
PsyI	GACNNNGTC	1 cut(s)	1034
RsaI	GTAC	2 cut(s)	409, 589
RsaNI	GTAC	2 cut(s)	408, 588
RseI	CAYNNNNRTG	1 cut(s)	519
SaqAI	TTAA	6 cut(s)	204, 293, 611, 852, 990, 1542
SatI	GCNGC	4 cut(s)	32, 697, 1254, 2212
Sau3AI	GATC	5 cut(s)	508, 983, 1819, 1866, 2188
Sau96I	GGNCC	6 cut(s)	82, 83, 1394, 1465, 1871, 2155
ScaI	AGTACT	1 cut(s)	589
SchI	GAGTC	5 cut(s)	126, 466, 1016, 1646, 1756
ScrFI	CCNGG	2 cut(s)	619, 1045
SduI	GDGCHC	3 cut(s)	86, 141, 2109
SfaNI	GCATC	7 cut(s)	167, 404, 764, 1022, 1598, 1745, 1911
Sfr274I	CTCGAG	1 cut(s)	1333
SfuI	TTCGAA	1 cut(s)	1661
SinI	GGWCC	2 cut(s)	1394, 1465
SlaI	CTCGAG	1 cut(s)	1333
SmiMI	CAYNNNNRTG	1 cut(s)	519
SmlI	CTYRAG	4 cut(s)	474, 944, 1333, 2126
SmoI	CTYRAG	4 cut(s)	474, 944, 1333, 2126
SpeI	ACTAGT	1 cut(s)	326
SphI	GCATGC	2 cut(s)	703, 733
SseBI	AGGCCT	3 cut(s)	74, 1117, 1174
SsiI	CCGC	3 cut(s)	80, 651, 1209
SspMI	CTAG	6 cut(s)	327, 1503, 1596, 1743, 2042, 2221
StuI	AGGCCT	3 cut(s)	74, 1117, 1174
StyD4I	CCNGG	2 cut(s)	617, 1043
StyI	CCWWGG	3 cut(s)	412, 803, 2063
TaaI	ACNGT	3 cut(s)	1099, 1153, 1375
TaiI	ACGT	7 cut(s)	243, 664, 1226, 1411, 1879, 1998, 2026
TaqI	TCGA	5 cut(s)	215, 1334, 1661, 1786, 2172
TatI	WGTACW	1 cut(s)	587
Tru1I	TTAA	6 cut(s)	204, 293, 611, 852, 990, 1542
Tru9I	TTAA	6 cut(s)	204, 293, 611, 852, 990, 1542
TscAI	CASTG	8 cut(s)	468, 1102, 1563, 1609, 1632, 1719, 1797, 1906
TseFI	GTSAC	3 cut(s)	1234, 1931, 2141
TseI	GCWGC	4 cut(s)	31, 696, 1253, 2211
Tsp45I	GTSAC	3 cut(s)	1234, 1931, 2141
TspDTI	ATGAA	5 cut(s)	503, 808, 1425, 1923, 2193
TspGWI	ACGGA	1 cut(s)	574
TspRI	CASTG	8 cut(s)	468, 1102, 1563, 1609, 1632, 1719, 1797, 1906
Tth111I	GACNNNGTC	1 cut(s)	1034
Van91I	CCANNNNNTGG	1 cut(s)	1558
VpaK11BI	GGWCC	2 cut(s)	1394, 1465
XagI	CCTNNNNNAGG	2 cut(s)	1661, 2162
XapI	RAATTY	1 cut(s)	1949
XceI	RCATGY	4 cut(s)	703, 733, 737, 764
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1881
XhoI	CTCGAG	1 cut(s)	1333
XmiI	GTMKAC	1 cut(s)	120
XmnI	GAANNNNTTC	2 cut(s)	453, 922
XspI	CTAG	6 cut(s)	327, 1503, 1596, 1743, 2042, 2221
ZrmI	AGTACT	1 cut(s)	589
Zsp2I	ATGCAT	1 cut(s)	735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.