K-box region
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22540 AT2G22540 AT2G22540 AT4G24540 |
| fragaria_vesca | FvH4_1g19710 |
| malus_domestica | MD01G1038600.v1.1 MD15G1313200.v1.1 |
| prunus_persica | Prupe.6G199000_v2.0.a1 Prupe.6G199000_v2.0.a1 Prupe.6G199000_v2.0.a1 Prupe.6G199000_v2.0.a1 Prupe.6G199000_v2.0.a1 |
| pyrus_communis | pycom01g06650 pycom15g27660 |
| rosa_chinensis | RchiOBHm_Chr2g0111271 |
| rosa_laevigata | RLG00000017881 |
| rosa_multiflora | Rmu_sc0011720.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00132550 |
| rosa_rugosa | Rorug02G0172600 Rorug02G0172600 Rorug02G0172600 |
| rosa_samantha | Rh2AG225400 Rh2BG237200 Rh2CG228400 Rh2DG232800 |
| rosa_wichuraiana | Rw2G017400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 398 |
| AciI | CCGC | 1 cut(s) | 376 |
| AclWI | GGATC | 4 cut(s) | 236, 249, 351, 478 |
| AcsI | RAATTY | 1 cut(s) | 447 |
| AcuI | CTGAAG | 1 cut(s) | 656 |
| AgsI | TTSAA | 3 cut(s) | 88, 358, 395 |
| AleI | CACNNNNGTG | 1 cut(s) | 581 |
| AluBI | AGCT | 5 cut(s) | 160, 177, 322, 591, 640 |
| AluI | AGCT | 5 cut(s) | 160, 177, 322, 591, 640 |
| Alw26I | GTCTC | 5 cut(s) | 43, 183, 490, 509, 554 |
| AlwI | GGATC | 4 cut(s) | 236, 249, 351, 478 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 379 |
| Aor13HI | TCCGGA | 1 cut(s) | 398 |
| ApeKI | GCWGC | 2 cut(s) | 319, 373 |
| ApoI | RAATTY | 1 cut(s) | 447 |
| AsuHPI | GGTGA | 1 cut(s) | 583 |
| BamHI | GGATCC | 1 cut(s) | 241 |
| BbsI | GAAGAC | 2 cut(s) | 203, 312 |
| BbvI | GCAGC | 2 cut(s) | 331, 385 |
| BccI | CCATC | 3 cut(s) | 232, 344, 658 |
| BceAI | ACGGC | 1 cut(s) | 393 |
| BcoDI | GTCTC | 5 cut(s) | 43, 183, 490, 509, 554 |
| BfaI | CTAG | 1 cut(s) | 512 |
| BisI | GCNGC | 3 cut(s) | 320, 374, 377 |
| BlsI | GCNGC | 3 cut(s) | 321, 375, 378 |
| BmiI | GGNNCC | 1 cut(s) | 243 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BpiI | GAAGAC | 2 cut(s) | 203, 312 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 605, 637 |
| BpmI | CTGGAG | 3 cut(s) | 157, 268, 401 |
| BpuEI | CTTGAG | 4 cut(s) | 163, 287, 479, 632 |
| BsaWI | WCCGGW | 2 cut(s) | 152, 398 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 551, 581 |
| BseAI | TCCGGA | 1 cut(s) | 398 |
| BseGI | GGATG | 2 cut(s) | 490, 622 |
| BseMII | CTCAG | 2 cut(s) | 323, 491 |
| BseRI | GAGGAG | 1 cut(s) | 351 |
| BseXI | GCAGC | 2 cut(s) | 331, 385 |
| BsiSI | CCGG | 3 cut(s) | 153, 262, 399 |
| BsmAI | GTCTC | 5 cut(s) | 43, 183, 490, 509, 554 |
| BsmBI | CGTCTC | 1 cut(s) | 509 |
| Bsp13I | TCCGGA | 1 cut(s) | 398 |
| Bsp143I | GATC | 3 cut(s) | 241, 343, 470 |
| BspACI | CCGC | 1 cut(s) | 376 |
| BspCNI | CTCAG | 2 cut(s) | 324, 492 |
| BspEI | TCCGGA | 1 cut(s) | 398 |
| BspLI | GGNNCC | 1 cut(s) | 243 |
| BspPI | GGATC | 4 cut(s) | 236, 249, 351, 478 |
| BspQI | GCTCTTC | 1 cut(s) | 167 |
| BssMI | GATC | 3 cut(s) | 241, 343, 470 |
| Bst4CI | ACNGT | 1 cut(s) | 599 |
| Bst6I | CTCTTC | 3 cut(s) | 70, 167, 360 |
| BstDEI | CTNAG | 5 cut(s) | 290, 332, 361, 404, 500 |
| BstEII | GGTNACC | 1 cut(s) | 571 |
| BstF5I | GGATG | 2 cut(s) | 490, 622 |
| BstKTI | GATC | 3 cut(s) | 244, 346, 473 |
| BstMAI | GTCTC | 5 cut(s) | 43, 183, 490, 509, 554 |
| BstMBI | GATC | 3 cut(s) | 241, 343, 470 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstPI | GGTNACC | 1 cut(s) | 571 |
| BstV1I | GCAGC | 2 cut(s) | 331, 385 |
| BstV2I | GAAGAC | 2 cut(s) | 203, 312 |
| BstX2I | RGATCY | 2 cut(s) | 241, 343 |
| BstYI | RGATCY | 2 cut(s) | 241, 343 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 2 cut(s) | 490, 622 |
| BtsIMutI | CAGTG | 1 cut(s) | 604 |
| CaiI | CAGNNNCTG | 1 cut(s) | 379 |
| CseI | GACGC | 1 cut(s) | 550 |
| CviAII | CATG | 1 cut(s) | 215 |
| DdeI | CTNAG | 5 cut(s) | 290, 332, 361, 404, 500 |
| DpnI | GATC | 3 cut(s) | 243, 345, 472 |
| DpnII | GATC | 3 cut(s) | 241, 343, 470 |
| Eam1104I | CTCTTC | 3 cut(s) | 70, 167, 360 |
| EarI | CTCTTC | 3 cut(s) | 70, 167, 360 |
| Eco57I | CTGAAG | 1 cut(s) | 656 |
| Eco91I | GGTNACC | 1 cut(s) | 571 |
| EcoO65I | GGTNACC | 1 cut(s) | 571 |
| Esp3I | CGTCTC | 1 cut(s) | 509 |
| FaeI | CATG | 1 cut(s) | 218 |
| FaiI | YATR | 4 cut(s) | 41, 194, 207, 216 |
| FatI | CATG | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 3 cut(s) | 320, 374, 377 |
| FokI | GGATG | 2 cut(s) | 497, 629 |
| Fsp4HI | GCNGC | 3 cut(s) | 320, 374, 377 |
| FspBI | CTAG | 1 cut(s) | 512 |
| GluI | GCNGC | 3 cut(s) | 320, 374, 377 |
| GsuI | CTGGAG | 3 cut(s) | 157, 268, 401 |
| HapII | CCGG | 3 cut(s) | 153, 262, 399 |
| HgaI | GACGC | 1 cut(s) | 550 |
| Hin1II | CATG | 1 cut(s) | 218 |
| HindIII | AAGCTT | 1 cut(s) | 638 |
| HinfI | GANTC | 4 cut(s) | 81, 395, 566, 620 |
| HpaII | CCGG | 3 cut(s) | 153, 262, 399 |
| HphI | GGTGA | 1 cut(s) | 583 |
| Hpy188I | TCNGA | 3 cut(s) | 418, 475, 625 |
| Hpy188III | TCNNGA | 5 cut(s) | 88, 180, 285, 347, 399 |
| Hpy99I | CGWCG | 1 cut(s) | 544 |
| HpyAV | CCTTC | 3 cut(s) | 195, 258, 418 |
| HpyCH4III | ACNGT | 1 cut(s) | 599 |
| HpyCH4IV | ACGT | 1 cut(s) | 518 |
| HpyCH4V | TGCA | 2 cut(s) | 218, 373 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 5 cut(s) | 290, 332, 361, 404, 500 |
| HpySE526I | ACGT | 1 cut(s) | 518 |
| Hsp92II | CATG | 1 cut(s) | 218 |
| Kpn2I | TCCGGA | 1 cut(s) | 398 |
| Kzo9I | GATC | 3 cut(s) | 241, 343, 470 |
| LguI | GCTCTTC | 1 cut(s) | 167 |
| LpnPI | CCDG | 7 cut(s) | 166, 187, 275, 298, 365, 412, 647 |
| Lsp1109I | GCAGC | 2 cut(s) | 331, 385 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 1 cut(s) | 512 |
| MaeII | ACGT | 1 cut(s) | 518 |
| MaeIII | GTNAC | 4 cut(s) | 55, 221, 275, 571 |
| MalI | GATC | 3 cut(s) | 243, 345, 472 |
| MboI | GATC | 3 cut(s) | 241, 343, 470 |
| MflI | RGATCY | 2 cut(s) | 241, 343 |
| MluCI | AATT | 4 cut(s) | 233, 271, 447, 476 |
| MlyI | GAGTC | 2 cut(s) | 575, 614 |
| MmeI | TCCRAC | 2 cut(s) | 501, 648 |
| MnlI | CCTC | 7 cut(s) | 71, 290, 329, 334, 495, 544, 607 |
| MroI | TCCGGA | 1 cut(s) | 398 |
| MseI | TTAA | 1 cut(s) | 546 |
| MslI | CAYNNNNRTG | 1 cut(s) | 581 |
| MspA1I | CMGCKG | 1 cut(s) | 376 |
| MspI | CCGG | 3 cut(s) | 153, 262, 399 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NdeII | GATC | 3 cut(s) | 241, 343, 470 |
| NlaIII | CATG | 1 cut(s) | 218 |
| NlaIV | GGNNCC | 1 cut(s) | 243 |
| NmuCI | GTSAC | 1 cut(s) | 571 |
| OliI | CACNNNNGTG | 1 cut(s) | 581 |
| PciSI | GCTCTTC | 1 cut(s) | 167 |
| PfeI | GAWTC | 2 cut(s) | 81, 395 |
| PflFI | GACNNNGTC | 1 cut(s) | 565 |
| PkrI | GCNGC | 3 cut(s) | 321, 375, 378 |
| PleI | GAGTC | 2 cut(s) | 574, 614 |
| PpsI | GAGTC | 2 cut(s) | 574, 614 |
| PspEI | GGTNACC | 1 cut(s) | 571 |
| PspN4I | GGNNCC | 1 cut(s) | 243 |
| PstNI | CAGNNNCTG | 1 cut(s) | 379 |
| PsuI | RGATCY | 2 cut(s) | 241, 343 |
| PsyI | GACNNNGTC | 1 cut(s) | 565 |
| RseI | CAYNNNNRTG | 1 cut(s) | 581 |
| SapI | GCTCTTC | 1 cut(s) | 167 |
| SaqAI | TTAA | 1 cut(s) | 546 |
| SatI | GCNGC | 3 cut(s) | 320, 374, 377 |
| Sau3AI | GATC | 3 cut(s) | 241, 343, 470 |
| SchI | GAGTC | 2 cut(s) | 575, 614 |
| SetI | ASST | 9 cut(s) | 162, 179, 206, 250, 282, 324, 521, 593, 642 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 581 |
| SmlI | CTYRAG | 4 cut(s) | 178, 266, 458, 611 |
| SmoI | CTYRAG | 4 cut(s) | 178, 266, 458, 611 |
| Sse9I | AATT | 4 cut(s) | 233, 271, 447, 476 |
| SsiI | CCGC | 1 cut(s) | 376 |
| SspMI | CTAG | 1 cut(s) | 512 |
| TaaI | ACNGT | 1 cut(s) | 599 |
| TaiI | ACGT | 1 cut(s) | 521 |
| TaqI | TCGA | 2 cut(s) | 165, 303 |
| TasI | AATT | 4 cut(s) | 233, 271, 447, 476 |
| TauI | GCSGC | 1 cut(s) | 379 |
| TfiI | GAWTC | 2 cut(s) | 81, 395 |
| Tru1I | TTAA | 1 cut(s) | 546 |
| Tru9I | TTAA | 1 cut(s) | 546 |
| TscAI | CASTG | 1 cut(s) | 604 |
| TseFI | GTSAC | 1 cut(s) | 571 |
| TseI | GCWGC | 2 cut(s) | 319, 373 |
| Tsp45I | GTSAC | 1 cut(s) | 571 |
| TspDTI | ATGAA | 2 cut(s) | 114, 203 |
| TspGWI | ACGGA | 1 cut(s) | 340 |
| TspRI | CASTG | 1 cut(s) | 604 |
| Tth111I | GACNNNGTC | 1 cut(s) | 565 |
| XapI | RAATTY | 1 cut(s) | 447 |
| XspI | CTAG | 1 cut(s) | 512 |