AT4G26890
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0012851
Physical Location & Seq
Forward (+)
13511837 .. 13513406
1570 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26890.1

Sequence Viewer

Length: 1335 bp
ATGGAGATTAATTGGACAAGAGGACCAATCATCGGTCGAGGCTCTACCGCCACTGTCTCTATAGCAATCTCAAGCTCCGGTGAGCTCTTCGCCGTCAAATCTGCCGACTTATCTTCTTCGTCCTTGTTGCAGAAAGAGCAATCAATCTTGTCTACATTGAGCTCTCCTCACATGGTCAAATACATAGGCACTGGTTTAACGCGCGAGAGCAACGGATTGGTGTACAATATACTGATGGAATACGTTTCTGGTGGAAATCTTCACGATTTAATCAAAAATTCCGGCGGTAAGTTGCCGGAGCCGGAGATAAGATCATACACTCGTCAGATTCTTAACGGTTTGGTGTATCTTCACGAGAGAGGGATTGTTCACTGCGACTTGAAGAGCCATAACGTTCTGGTTGAGGAAAATGGCGTTTTGAAAATCGCCGACATGGGTTGTGCTAAATCGGTTGACAAGTCGGAATTTTCCGGTACACCGGCGTTTATGGCCCCAGAAGTTGCTCGTGGTGAAGAACAGAGGTTTCCGGCTGATGTGTGGGCTTTGGGATGTACGATGATCGAGATGATGACTGGATCAAGCCCTTGGCCGGAGTTAAACGACGTCGTTGCTGCAATGTATAAGATTGGATTTTCAGGCGAGTCGCCGGCGATTCCCGCGTGGATATCGGATAAAGCTAAAGACTTTCTGAAGAATTGTTTAAAGGAAGATCAAAAACAGAGATGGACTGTGGAAGAATTACTTAAACATCCATTTCTTGATGACGACGAAGAATCTCAGACAAGTGATTGTTTGAAGAACAAGACTTCTTCTCCAAGCACTGTGTTGGATCAACGATTTTGGGATTCATGCGAAAGCTCCAAAAGTCACTTAGTTTCGATTGATCATGAAGACCCTTTTGCTGAATACTCGGAATCTTTGGATTCACCGGCTGATCGGATCGAGAAACTCGCCGGAGATGAGTTTTCAAGCTTACTTGATTGGGATACGGAAGACGATGGCGGATGGATTCAAGTGAGAGGCGAGAAACATAAAGAAACCGAGAAACGCGACGGCGACGAAGACGTGATTTGCGTTGAAGCAACGTCATCGTCGCAAACGATTGAAGAAGTTGAAGATTGGATTTCGAATCAAGACAGCTTGTTCTCGGAATATTCCTCTGACGACATCATTAATAATTTCTACTCTAATGTTGCTATTCAAGGAAATTTAATTGCATTTCATTATTGTACTGATGAAGATGAAAATGTATCCATAAAGAATATGTTTCGTACTAATAACAAACATTTGTTTTTCAAATTGCAAGCTCATGTTAAATTCACTAACCAAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010119 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0032870 GO:0033554 GO:0033674 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048831 GO:0048856 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0090702 GO:0097305 GO:0097306 GO:0099120 GO:0099568 GO:0140096 GO:1900055 GO:1900057 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1902456 GO:1902457 GO:1902531 GO:1902533 GO:1905623 GO:1905957 GO:1905959 GO:2000024 GO:2000026 GO:2000038
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

444

Amino Acids

49.63

Weight (kDa)

4.67

Isoelectric Point (pI)

49.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 7 - 253 1.4e-59 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 11 - 249 8.2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012851)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G26890 AT5G55090 AT5G55090
fragaria_vesca FvH4_3g01720
malus_domestica MD05G1349600.v1.1 MD10G1324300.v1.1
prunus_persica Prupe.4G017800_v2.0.a1 Prupe.5G022300_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0002581
rosa_laevigata RLG00000031041
rosa_multiflora Rmu_co8355711.1_g000001 Rmu_sc0009084.1_g000001
rosa_rugosa Rorug04G0397000
rosa_samantha Rh5AG020500 Rh5BG023200 Rh5CG022500 Rh5DG021600
rosa_wichuraiana Rw5G001890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 606
AccI GTMKAC 1 cut(s) 152
AccII CGCG 4 cut(s) 202, 204, 659, 1050
AciI CCGC 4 cut(s) 48, 285, 657, 1002
AclI AACGTT 1 cut(s) 393
AclWI GGATC 3 cut(s) 583, 837, 947
AcoI YGGCCR 1 cut(s) 587
AcsI RAATTY 4 cut(s) 277, 464, 1207, 1316
AcuI CTGAAG 1 cut(s) 710
AcyI GRCGYC 1 cut(s) 603
AfaI GTAC 5 cut(s) 224, 475, 553, 1231, 1273
AfiI CCNNNNNNNGG 2 cut(s) 32, 589
AjiI CACGTC 1 cut(s) 1066
AluBI AGCT 8 cut(s) 75, 85, 162, 677, 858, 972, 1140, 1307
AluI AGCT 8 cut(s) 75, 85, 162, 677, 858, 972, 1140, 1307
Alw21I GWGCWC 2 cut(s) 87, 164
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 3 cut(s) 583, 837, 947
AoxI GGCC 2 cut(s) 489, 587
ApeKI GCWGC 1 cut(s) 611
ApoI RAATTY 4 cut(s) 277, 464, 1207, 1316
AseI ATTAAT 2 cut(s) 9, 1173
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 2 cut(s) 23, 490
AsuHPI GGTGA 3 cut(s) 92, 521, 918
AsuII TTCGAA 1 cut(s) 1127
AvaII GGWCC 1 cut(s) 23
BanII GRGCYC 2 cut(s) 87, 164
BauI CACGAG 2 cut(s) 353, 504
BbsI GAAGAC 3 cut(s) 897, 999, 1068
Bbv12I GWGCWC 2 cut(s) 87, 164
BbvI GCAGC 1 cut(s) 598
BccI CCATC 4 cut(s) 229, 717, 992, 999
BceAI ACGGC 2 cut(s) 77, 1069
BcgI CGANNNNNNTGC 4 cut(s) 590, 624, 1071, 1105
BciVI GTATCC 2 cut(s) 979, 1261
BclI TGATCA 1 cut(s) 883
BcoDI GTCTC 1 cut(s) 61
BfmI CTRYAG 1 cut(s) 60
BfuI GTATCC 2 cut(s) 979, 1261
BisI GCNGC 1 cut(s) 612
BlsI GCNGC 1 cut(s) 613
Bme18I GGWCC 1 cut(s) 23
BmgBI CACGTC 1 cut(s) 1066
BmgT120I GGNCC 2 cut(s) 23, 490
BmiI GGNNCC 2 cut(s) 300, 492
BpiI GAAGAC 3 cut(s) 897, 999, 1068
BplI GAGNNNNNCTC 2 cut(s) 151, 183
Bpu14I TTCGAA 1 cut(s) 1127
BpuEI CTTGAG 1 cut(s) 55
BsaHI GRCGYC 1 cut(s) 603
BsaJI CCNNGG 1 cut(s) 584
BsaWI WCCGGW 2 cut(s) 77, 470
BsaXI ACNNNNNCTCC 2 cut(s) 796, 826
Bsc4I CCNNNNNNNGG 2 cut(s) 32, 589
Bse118I RCCGGY 3 cut(s) 478, 646, 928
Bse1I ACTGG 2 cut(s) 196, 577
Bse3DI GCAATG 1 cut(s) 621
BseDI CCNNGG 1 cut(s) 584
BseGI GGATG 3 cut(s) 554, 748, 1010
BseLI CCNNNNNNNGG 2 cut(s) 32, 589
BseMI GCAATG 1 cut(s) 621
BseMII CTCAG 1 cut(s) 791
BseNI ACTGG 2 cut(s) 196, 577
BseRI GAGGAG 1 cut(s) 156
BseXI GCAGC 1 cut(s) 598
Bsh1236I CGCG 4 cut(s) 202, 204, 659, 1050
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 2 cut(s) 491, 589
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 2 cut(s) 87, 164
BslI CCNNNNNNNGG 2 cut(s) 32, 589
BsmAI GTCTC 1 cut(s) 61
BsnI GGCC 2 cut(s) 491, 589
Bsp119I TTCGAA 1 cut(s) 1127
Bsp1286I GDGCHC 2 cut(s) 87, 164
Bsp1407I TGTACA 1 cut(s) 222
Bsp143I GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
BspACI CCGC 4 cut(s) 48, 285, 657, 1002
BspANI GGCC 2 cut(s) 491, 589
BspCNI CTCAG 1 cut(s) 790
BspFNI CGCG 4 cut(s) 202, 204, 659, 1050
BspHI TCATGA 1 cut(s) 886
BspLI GGNNCC 2 cut(s) 300, 492
BspPI GGATC 3 cut(s) 583, 837, 947
BspQI GCTCTTC 2 cut(s) 92, 377
BspT104I TTCGAA 1 cut(s) 1127
BsrDI GCAATG 1 cut(s) 621
BsrFI RCCGGY 3 cut(s) 478, 646, 928
BsrGI TGTACA 1 cut(s) 222
BsrI ACTGG 2 cut(s) 196, 577
BssAI RCCGGY 3 cut(s) 478, 646, 928
BssECI CCNNGG 1 cut(s) 584
BssMI GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
BssNI GRCGYC 1 cut(s) 603
BssSI CACGAG 2 cut(s) 353, 504
BssT1I CCWWGG 1 cut(s) 584
Bst2BI CACGAG 2 cut(s) 353, 504
Bst4CI ACNGT 4 cut(s) 55, 338, 730, 823
Bst6I CTCTTC 2 cut(s) 92, 377
BstACI GRCGYC 1 cut(s) 603
BstAUI TGTACA 1 cut(s) 222
BstBI TTCGAA 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 648, 1305
BstDEI CTNAG 2 cut(s) 777, 871
BstF5I GGATG 3 cut(s) 554, 748, 1010
BstFNI CGCG 4 cut(s) 202, 204, 659, 1050
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 8 cut(s) 314, 561, 578, 712, 832, 886, 937, 942
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 3 cut(s) 136, 488, 656
BstSFI CTRYAG 1 cut(s) 60
BstUI CGCG 4 cut(s) 202, 204, 659, 1050
BstV1I GCAGC 1 cut(s) 598
BstV2I GAAGAC 3 cut(s) 897, 999, 1068
BsuI GTATCC 2 cut(s) 979, 1261
BsuRI GGCC 2 cut(s) 491, 589
BtrI CACGTC 1 cut(s) 1066
BtsCI GGATG 3 cut(s) 554, 748, 1010
BtsI GCAGTG 1 cut(s) 370
BtsIMutI CAGTG 4 cut(s) 51, 189, 370, 819
Cac8I GCNNGC 2 cut(s) 648, 1305
CciI TCATGA 1 cut(s) 886
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 3 cut(s) 478, 646, 928
Cfr13I GGNCC 2 cut(s) 23, 490
Csp6I GTAC 5 cut(s) 223, 474, 552, 1230, 1272
CviAII CATG 5 cut(s) 172, 433, 849, 887, 1310
CviQI GTAC 5 cut(s) 223, 474, 552, 1230, 1272
DdeI CTNAG 2 cut(s) 777, 871
DpnI GATC 8 cut(s) 313, 560, 577, 711, 831, 885, 936, 941
DpnII GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
DraI TTTAAA 1 cut(s) 702
EaeI YGGCCR 1 cut(s) 587
Eam1104I CTCTTC 2 cut(s) 92, 377
EarI CTCTTC 2 cut(s) 92, 377
EciI GGCGGA 1 cut(s) 1017
Ecl136II GAGCTC 2 cut(s) 85, 162
Eco130I CCWWGG 1 cut(s) 584
Eco24I GRGCYC 2 cut(s) 87, 164
Eco32I GATATC 1 cut(s) 666
Eco47I GGWCC 1 cut(s) 23
Eco53kI GAGCTC 2 cut(s) 85, 162
Eco57I CTGAAG 1 cut(s) 710
EcoICRI GAGCTC 2 cut(s) 85, 162
EcoRV GATATC 1 cut(s) 666
EcoT14I CCWWGG 1 cut(s) 584
EcoT38I GRGCYC 2 cut(s) 87, 164
ErhI CCWWGG 1 cut(s) 584
FaeI CATG 5 cut(s) 175, 436, 852, 890, 1313
FalI AAGNNNNNCTT 2 cut(s) 726, 758
FatI CATG 5 cut(s) 171, 432, 848, 886, 1309
FauI CCCGC 1 cut(s) 664
FbaI TGATCA 1 cut(s) 883
FblI GTMKAC 1 cut(s) 152
Fnu4HI GCNGC 1 cut(s) 612
FokI GGATG 3 cut(s) 561, 735, 1017
FriOI GRGCYC 2 cut(s) 87, 164
Fsp4HI GCNGC 1 cut(s) 612
GlaI GCGC 1 cut(s) 203
GluI GCNGC 1 cut(s) 612
HaeIII GGCC 2 cut(s) 491, 589
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 603
Hin1II CATG 5 cut(s) 175, 436, 852, 890, 1313
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 1 cut(s) 970
HinfI GANTC 9 cut(s) 328, 641, 652, 773, 845, 914, 923, 1009, 1129
HphI GGTGA 3 cut(s) 92, 521, 918
Hpy166II GTNNAC 5 cut(s) 153, 223, 370, 454, 476
Hpy188III TCNNGA 7 cut(s) 263, 353, 562, 758, 887, 943, 1133
Hpy8I GTNNAC 5 cut(s) 153, 223, 370, 454, 476
Hpy99I CGWCG 6 cut(s) 605, 608, 770, 1055, 1061, 1096
HpyCH4III ACNGT 4 cut(s) 55, 338, 730, 823
HpyCH4IV ACGT 5 cut(s) 243, 393, 603, 1065, 1085
HpyCH4V TGCA 4 cut(s) 130, 614, 1217, 1303
HpyF10VI GCNNNNNNNGC 3 cut(s) 136, 488, 656
HpyF3I CTNAG 2 cut(s) 777, 871
HpySE526I ACGT 5 cut(s) 243, 393, 603, 1065, 1085
Hsp92I GRCGYC 1 cut(s) 603
Hsp92II CATG 5 cut(s) 175, 436, 852, 890, 1313
HspAI GCGC 1 cut(s) 202
KroI GCCGGC 1 cut(s) 646
KroNI GCCGGC 1 cut(s) 648
Ksp22I TGATCA 1 cut(s) 883
Kzo9I GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
LguI GCTCTTC 2 cut(s) 92, 377
LmnI GCTCC 3 cut(s) 80, 298, 863
Lsp1109I GCAGC 1 cut(s) 598
MaeII ACGT 5 cut(s) 243, 393, 603, 1065, 1085
MaeIII GTNAC 1 cut(s) 866
MalI GATC 8 cut(s) 313, 560, 577, 711, 831, 885, 936, 941
MboI GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
MhlI GDGCHC 2 cut(s) 87, 164
MlyI GAGTC 1 cut(s) 650
MmeI TCCRAC 2 cut(s) 441, 807
MnlI CCTC 8 cut(s) 14, 32, 177, 353, 397, 513, 1013, 1168
MreI CGCCGGCG 1 cut(s) 646
MroNI GCCGGC 1 cut(s) 646
MvnI CGCG 4 cut(s) 202, 204, 659, 1050
MwoI GCNNNNNNNGC 3 cut(s) 136, 488, 656
NaeI GCCGGC 1 cut(s) 648
NdeII GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
NgoMIV GCCGGC 1 cut(s) 646
NlaIII CATG 5 cut(s) 175, 436, 852, 890, 1313
NlaIV GGNNCC 2 cut(s) 300, 492
NmuCI GTSAC 1 cut(s) 866
NspV TTCGAA 1 cut(s) 1127
PagI TCATGA 1 cut(s) 886
PciSI GCTCTTC 2 cut(s) 92, 377
PcsI WCGNNNNNNNCGW 2 cut(s) 1071, 1097
PdiI GCCGGC 1 cut(s) 648
PfeI GAWTC 8 cut(s) 328, 652, 773, 845, 914, 923, 1009, 1129
PkrI GCNGC 1 cut(s) 613
PleI GAGTC 1 cut(s) 649
PpsI GAGTC 1 cut(s) 649
PshBI ATTAAT 2 cut(s) 9, 1173
Psp124BI GAGCTC 2 cut(s) 87, 164
Psp1406I AACGTT 1 cut(s) 393
PspN4I GGNNCC 2 cut(s) 300, 492
PspPI GGNCC 2 cut(s) 23, 490
RsaI GTAC 5 cut(s) 224, 475, 553, 1231, 1273
RsaNI GTAC 5 cut(s) 223, 474, 552, 1230, 1272
SacI GAGCTC 2 cut(s) 87, 164
SapI GCTCTTC 2 cut(s) 92, 377
SatI GCNGC 1 cut(s) 612
Sau3AI GATC 8 cut(s) 311, 558, 575, 709, 829, 883, 934, 939
Sau96I GGNCC 2 cut(s) 23, 490
SchI GAGTC 1 cut(s) 650
SduI GDGCHC 2 cut(s) 87, 164
SfcI CTRYAG 1 cut(s) 60
SfuI TTCGAA 1 cut(s) 1127
SgrAI CRCCGGYG 2 cut(s) 478, 646
SinI GGWCC 1 cut(s) 23
SmlI CTYRAG 1 cut(s) 70
SmoI CTYRAG 1 cut(s) 70
SsiI CCGC 4 cut(s) 48, 285, 657, 1002
SspI AATATT 1 cut(s) 1154
SstI GAGCTC 2 cut(s) 87, 164
StyI CCWWGG 1 cut(s) 584
TaaI ACNGT 4 cut(s) 55, 338, 730, 823
TaiI ACGT 5 cut(s) 246, 396, 606, 1068, 1088
TaqI TCGA 5 cut(s) 37, 561, 878, 942, 1127
TaqII GACCGA 1 cut(s) 23
TatI WGTACW 2 cut(s) 222, 1229
TfiI GAWTC 8 cut(s) 328, 652, 773, 845, 914, 923, 1009, 1129
TscAI CASTG 4 cut(s) 58, 196, 377, 826
TseFI GTSAC 1 cut(s) 866
TseI GCWGC 1 cut(s) 611
Tsp45I GTSAC 1 cut(s) 866
TspDTI ATGAA 5 cut(s) 837, 903, 1211, 1251, 1257
TspGWI ACGGA 2 cut(s) 228, 1004
TspRI CASTG 4 cut(s) 58, 196, 377, 826
VpaK11BI GGWCC 1 cut(s) 23
VspI ATTAAT 2 cut(s) 9, 1173
XapI RAATTY 4 cut(s) 277, 464, 1207, 1316
XmiI GTMKAC 1 cut(s) 152
ZraI GACGTC 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.