FvH4_3g01720

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
887358 .. 888988
1631 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01720.t1

Sequence Viewer

Length: 1224 bp
ATGAACTGGAAAAGAGGCCGAACAATCGGCGTTGGCTCCTCGGCCACCGTGTCCTTAGCTCGGTCTTGTGTTTCCGGGGAGGTTTTCGCGGTGAAGTCAGCAAGTCTCTCACATTCACACTCTCTTCACGTCGAGCAAGAGATTCTGTCTACTTTGAGCTGTCCCCAAGTCGTGTCTTACAAGGGCTGCAACATCTCAACGGAAAACGGCAACGTTCTCTACAATCTCTGCCTCGAGTACGCACCGGCCGGCACGCTTTCGGACGAAGTTCGAAGGCAAGGCGGGTCACTAACAGAGTCTACGATGAGGTCCTACACGAGGCAGATACTATTAGGGATGGAGTATCTGCATGCTAATGGTATTGTACATTGTGACATTAAGGGTCACAATATTTTGGTGACAGATGAAGGCGCCAAGTTAGCAGATTTTGGTTGTGCTCGACGTGTAAATGGTGATCATTATGGCTCGGTTACAATTTGTGGCACCCCTCTTTACATGGCACCCGAGGCGGCGCGTGGAGAACAACAAGGATTCCCGGCGGATGTGTGGGCGCTAGGGTGTACAATCATCGAGATGGCTACCGGGCAGGCGCCGTGGCCTAGTGTTACAGACCCGGTATCGGGTTTGTACTGTATAGGGTTTTCAGGTGATGTGCCAGCGATTCCAAGCTCTTTGTCAAAGCAAGGTAGGGAATTTTTGAGCAAGTGTTTGAAGAGAGACCCATTGGAGAGGTGGTCAGCTAGTGAGCTACTCAAGCATTCTTTTCTTCTGGAGGAAGAACCCTGTTGGAATAGTCCCACAACTGTGTTGGATTATGGTTTATGGGACTTGGAGCAGTTTGATGATATGGAATGGGAAATAAGTACCTGTTCAGACTCGGCTAGGGAAAGAATTCGACGGTTGAGTGAAGGGAATGTCGATACGGCGTCGTTAATGCTCAATTGGGGTTGTGATGGAGATTGGGTGACAGTGAGAAGCAACAAGGAGGTGGATATATTGCCACAAGATGATGATCAAGATTATGAAGATGAGGCAACAAATACAAATTCTAGTGCTAGTAGTAAAAGGTTGGGTTTGGGCACTTGTAATGGTAGTTTTAGCTGTAGGGATATGAAGTATTGGCCTTTGAAGGCCTCAGTTTCCAAATGTAGCAGAAATGTGTTTTGTGTAAACCCAAACTTTGATAATGAGGAATTCTGGTTCTTTCTGCATGACATAGTATAA

Protein Analysis

408

Amino Acids

44.97

Weight (kDa)

4.89

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 256 6.7e-57 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 252 8.1e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012851)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 410, 482, 499, 589
AccI GTMKAC 2 cut(s) 149, 299
AccII CGCG 2 cut(s) 89, 514
AciI CCGC 4 cut(s) 89, 282, 509, 539
AclI AACGTT 1 cut(s) 213
AcoI YGGCCR 2 cut(s) 42, 246
AcsI RAATTY 4 cut(s) 692, 891, 1045, 1193
AcyI GRCGYC 3 cut(s) 411, 590, 926
AfaI GTAC 5 cut(s) 239, 366, 562, 629, 865
AfiI CCNNNNNNNGG 4 cut(s) 60, 318, 619, 620
AflIII ACRYGT 1 cut(s) 442
AgsI TTSAA 2 cut(s) 712, 1129
AjiI CACGTC 2 cut(s) 130, 443
AleI CACNNNNGTG 1 cut(s) 803
AloI GAACNNNNNNTCC 2 cut(s) 1184, 1216
AluBI AGCT 6 cut(s) 59, 159, 669, 740, 748, 1101
AluI AGCT 6 cut(s) 59, 159, 669, 740, 748, 1101
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 110, 711
Ama87I CYCGRG 2 cut(s) 233, 503
AoxI GGCC 6 cut(s) 16, 42, 246, 596, 1121, 1131
ApeKI GCWGC 1 cut(s) 186
ApoI RAATTY 4 cut(s) 692, 891, 1045, 1193
Asp700I GAANNNNTTC 1 cut(s) 891
AspLEI GCGC 4 cut(s) 413, 514, 553, 592
AspS9I GGNCC 1 cut(s) 309
AsuC2I CCSGG 4 cut(s) 76, 536, 583, 614
AsuHPI GGTGA 5 cut(s) 103, 409, 464, 659, 976
AsuII TTCGAA 1 cut(s) 271
AvaI CYCGRG 2 cut(s) 233, 503
AvaII GGWCC 1 cut(s) 309
BaeGI GKGCMC 1 cut(s) 1082
BanI GGYRCC 4 cut(s) 410, 482, 499, 589
BauI CACGAG 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 1 cut(s) 173
BccI CCATC 3 cut(s) 331, 568, 947
BceAI ACGGC 3 cut(s) 223, 577, 939
BclI TGATCA 2 cut(s) 454, 1012
BcnI CCSGG 4 cut(s) 76, 536, 583, 614
BcoDI GTCTC 2 cut(s) 110, 711
BfaI CTAG 6 cut(s) 554, 600, 741, 882, 1050, 1056
BfmI CTRYAG 1 cut(s) 1102
BfoI RGCGCY 3 cut(s) 414, 554, 593
BisI GCNGC 2 cut(s) 187, 510
BlsI GCNGC 2 cut(s) 188, 511
Bme1390I CCNGG 4 cut(s) 76, 536, 583, 614
Bme18I GGWCC 1 cut(s) 309
BmeT110I CYCGRG 2 cut(s) 233, 503
BmgBI CACGTC 2 cut(s) 130, 443
BmgT120I GGNCC 1 cut(s) 309
BmiI GGNNCC 5 cut(s) 37, 412, 484, 501, 591
BmrFI CCNGG 4 cut(s) 76, 536, 583, 614
BpmI CTGGAG 1 cut(s) 791
Bpu10I CCTNAGC 1 cut(s) 55
Bpu14I TTCGAA 1 cut(s) 271
BpuEI CTTGAG 1 cut(s) 737
BpuMI CCSGG 4 cut(s) 76, 536, 583, 614
BsaBI GATNNNNATC 1 cut(s) 1011
BsaHI GRCGYC 3 cut(s) 411, 590, 926
BsaI GGTCTC 1 cut(s) 711
BsaJI CCNNGG 4 cut(s) 39, 75, 504, 593
BsaXI ACNNNNNCTCC 4 cut(s) 719, 749, 948, 978
Bsc4I CCNNNNNNNGG 4 cut(s) 60, 318, 619, 620
Bse118I RCCGGY 2 cut(s) 244, 248
Bse1I ACTGG 1 cut(s) 11
Bse8I GATNNNNATC 1 cut(s) 1011
BseDI CCNNGG 4 cut(s) 39, 75, 504, 593
BseGI GGATG 2 cut(s) 342, 547
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 4 cut(s) 60, 318, 619, 620
BseMII CTCAG 1 cut(s) 1149
BseNI ACTGG 1 cut(s) 11
BseRI GAGGAG 1 cut(s) 28
BseSI GKGCMC 1 cut(s) 1082
BseX3I CGGCCG 1 cut(s) 246
BseXI GCAGC 1 cut(s) 173
Bsh1236I CGCG 2 cut(s) 89, 514
Bsh1285I CGRYCG 1 cut(s) 249
BshFI GGCC 6 cut(s) 18, 44, 248, 598, 1123, 1133
BshNI GGYRCC 4 cut(s) 410, 482, 499, 589
BsiEI CGRYCG 1 cut(s) 249
BsiHKAI GWGCWC 1 cut(s) 439
BsiHKCI CYCGRG 2 cut(s) 233, 503
BsiSI CCGG 6 cut(s) 75, 245, 249, 536, 582, 614
BslFI GGGAC 3 cut(s) 147, 780, 839
BslI CCNNNNNNNGG 4 cut(s) 60, 318, 619, 620
BsmAI GTCTC 2 cut(s) 110, 711
BsmFI GGGAC 3 cut(s) 147, 780, 839
BsmI GAATGC 1 cut(s) 757
BsnI GGCC 6 cut(s) 18, 44, 248, 598, 1123, 1133
Bso31I GGTCTC 1 cut(s) 711
BsoBI CYCGRG 2 cut(s) 233, 503
Bsp119I TTCGAA 1 cut(s) 271
Bsp1286I GDGCHC 2 cut(s) 439, 1082
Bsp1407I TGTACA 2 cut(s) 364, 560
Bsp143I GATC 2 cut(s) 454, 1012
BspACI CCGC 4 cut(s) 89, 282, 509, 539
BspANI GGCC 6 cut(s) 18, 44, 248, 598, 1123, 1133
BspCNI CTCAG 1 cut(s) 1148
BspFNI CGCG 2 cut(s) 89, 514
BspLI GGNNCC 5 cut(s) 37, 412, 484, 501, 591
BspT104I TTCGAA 1 cut(s) 271
BspT107I GGYRCC 4 cut(s) 410, 482, 499, 589
BspTNI GGTCTC 1 cut(s) 711
BsrFI RCCGGY 2 cut(s) 244, 248
BsrGI TGTACA 2 cut(s) 364, 560
BsrI ACTGG 1 cut(s) 11
BssAI RCCGGY 2 cut(s) 244, 248
BssECI CCNNGG 4 cut(s) 39, 75, 504, 593
BssMI GATC 2 cut(s) 454, 1012
BssNI GRCGYC 3 cut(s) 411, 590, 926
BssSI CACGAG 1 cut(s) 316
Bst2BI CACGAG 1 cut(s) 316
Bst4CI ACNGT 5 cut(s) 49, 632, 805, 900, 970
Bst6I CTCTTC 2 cut(s) 129, 707
BstACI GRCGYC 3 cut(s) 411, 590, 926
BstAUI TGTACA 2 cut(s) 364, 560
BstBI TTCGAA 1 cut(s) 271
BstC8I GCNNGC 5 cut(s) 250, 254, 351, 588, 657
BstDEI CTNAG 2 cut(s) 55, 1135
BstDSI CCRYGG 1 cut(s) 593
BstENI CCTNNNNNAGG 1 cut(s) 316
BstF5I GGATG 2 cut(s) 342, 547
BstFNI CGCG 2 cut(s) 89, 514
BstH2I RGCGCY 3 cut(s) 414, 554, 593
BstHHI GCGC 4 cut(s) 413, 514, 553, 592
BstKTI GATC 2 cut(s) 457, 1015
BstMAI GTCTC 2 cut(s) 110, 711
BstMBI GATC 2 cut(s) 454, 1012
BstMCI CGRYCG 1 cut(s) 249
BstMWI GCNNNNNNNGC 3 cut(s) 419, 506, 754
BstNSI RCATGY 1 cut(s) 353
BstSCI CCNGG 4 cut(s) 74, 534, 581, 612
BstSFI CTRYAG 1 cut(s) 1102
BstSLI GKGCMC 1 cut(s) 1082
BstUI CGCG 2 cut(s) 89, 514
BstV1I GCAGC 1 cut(s) 173
BstZI CGGCCG 1 cut(s) 246
BsuRI GGCC 6 cut(s) 18, 44, 248, 598, 1123, 1133
BtgI CCRYGG 1 cut(s) 593
BtrI CACGTC 2 cut(s) 130, 443
BtsCI GGATG 2 cut(s) 342, 547
BtsIMutI CAGTG 1 cut(s) 975
Cac8I GCNNGC 5 cut(s) 250, 254, 351, 588, 657
CfoI GCGC 4 cut(s) 413, 514, 553, 592
Cfr10I RCCGGY 2 cut(s) 244, 248
Cfr13I GGNCC 1 cut(s) 309
CseI GACGC 1 cut(s) 915
Csp6I GTAC 5 cut(s) 238, 365, 561, 628, 864
CviAII CATG 3 cut(s) 350, 496, 1211
CviQI GTAC 5 cut(s) 238, 365, 561, 628, 864
DdeI CTNAG 2 cut(s) 55, 1135
DinI GGCGCC 2 cut(s) 412, 591
DpnI GATC 2 cut(s) 456, 1014
DpnII GATC 2 cut(s) 454, 1012
EaeI YGGCCR 2 cut(s) 42, 246
EagI CGGCCG 1 cut(s) 246
Eam1104I CTCTTC 2 cut(s) 129, 707
EarI CTCTTC 2 cut(s) 129, 707
EciI GGCGGA 1 cut(s) 554
EclXI CGGCCG 1 cut(s) 246
Eco147I AGGCCT 1 cut(s) 1133
Eco31I GGTCTC 1 cut(s) 711
Eco47I GGWCC 1 cut(s) 309
Eco52I CGGCCG 1 cut(s) 246
Eco88I CYCGRG 2 cut(s) 233, 503
EcoNI CCTNNNNNAGG 1 cut(s) 316
EcoO109I RGGNCCY 1 cut(s) 309
EcoRI GAATTC 2 cut(s) 891, 1193
EgeI GGCGCC 2 cut(s) 412, 591
EheI GGCGCC 2 cut(s) 412, 591
FaeI CATG 3 cut(s) 353, 499, 1214
FaqI GGGAC 3 cut(s) 147, 780, 839
FatI CATG 3 cut(s) 349, 495, 1210
FauI CCCGC 1 cut(s) 275
FbaI TGATCA 2 cut(s) 454, 1012
FblI GTMKAC 2 cut(s) 149, 299
Fnu4HI GCNGC 2 cut(s) 187, 510
FokI GGATG 2 cut(s) 349, 554
Fsp4HI GCNGC 2 cut(s) 187, 510
FspBI CTAG 6 cut(s) 554, 600, 741, 882, 1050, 1056
GlaI GCGC 4 cut(s) 412, 513, 552, 591
GluI GCNGC 2 cut(s) 187, 510
GsuI CTGGAG 1 cut(s) 791
HaeII RGCGCY 3 cut(s) 414, 554, 593
HaeIII GGCC 6 cut(s) 18, 44, 248, 598, 1123, 1133
HapII CCGG 6 cut(s) 75, 245, 249, 536, 582, 614
HgaI GACGC 1 cut(s) 915
HhaI GCGC 4 cut(s) 413, 514, 553, 592
Hin1I GRCGYC 3 cut(s) 411, 590, 926
Hin1II CATG 3 cut(s) 353, 499, 1214
Hin6I GCGC 4 cut(s) 411, 512, 551, 590
HinP1I GCGC 4 cut(s) 411, 512, 551, 590
HinfI GANTC 5 cut(s) 142, 296, 531, 661, 875
HpaII CCGG 6 cut(s) 75, 245, 249, 536, 582, 614
HphI GGTGA 5 cut(s) 103, 409, 464, 659, 976
Hpy166II GTNNAC 4 cut(s) 150, 300, 561, 1171
Hpy188I TCNGA 2 cut(s) 262, 874
Hpy188III TCNNGA 3 cut(s) 571, 770, 1016
Hpy8I GTNNAC 4 cut(s) 150, 300, 561, 1171
Hpy99I CGWCG 4 cut(s) 134, 444, 900, 931
HpyAV CCTTC 4 cut(s) 267, 401, 902, 1123
HpyCH4III ACNGT 5 cut(s) 49, 632, 805, 900, 970
HpyCH4IV ACGT 3 cut(s) 129, 213, 442
HpyCH4V TGCA 3 cut(s) 189, 349, 1210
HpyF10VI GCNNNNNNNGC 3 cut(s) 419, 506, 754
HpyF3I CTNAG 2 cut(s) 55, 1135
HpySE526I ACGT 3 cut(s) 129, 213, 442
Hsp92I GRCGYC 3 cut(s) 411, 590, 926
Hsp92II CATG 3 cut(s) 353, 499, 1214
HspAI GCGC 4 cut(s) 411, 512, 551, 590
KasI GGCGCC 2 cut(s) 410, 589
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
Ksp22I TGATCA 2 cut(s) 454, 1012
Kzo9I GATC 2 cut(s) 454, 1012
LmnI GCTCC 2 cut(s) 41, 832
Lsp1109I GCAGC 1 cut(s) 173
MaeI CTAG 6 cut(s) 554, 600, 741, 882, 1050, 1056
MaeII ACGT 3 cut(s) 129, 213, 442
MaeIII GTNAC 7 cut(s) 285, 371, 383, 397, 469, 604, 964
MalI GATC 2 cut(s) 456, 1014
MboI GATC 2 cut(s) 454, 1012
MboII GAAGA 5 cut(s) 116, 724, 758, 788, 1037
MfeI CAATTG 1 cut(s) 940
MhlI GDGCHC 2 cut(s) 439, 1082
MluCI AATT 6 cut(s) 474, 692, 891, 940, 1045, 1193
Mly113I GGCGCC 2 cut(s) 411, 590
MlyI GAGTC 2 cut(s) 305, 869
MmeI TCCRAC 2 cut(s) 767, 789
MroNI GCCGGC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 891
MseI TTAA 2 cut(s) 378, 932
MslI CAYNNNNRTG 3 cut(s) 354, 572, 803
MspI CCGG 6 cut(s) 75, 245, 249, 536, 582, 614
MspR9I CCNGG 4 cut(s) 76, 536, 583, 614
MunI CAATTG 1 cut(s) 940
Mva1269I GAATGC 1 cut(s) 757
MvnI CGCG 2 cut(s) 89, 514
MwoI GCNNNNNNNGC 3 cut(s) 419, 506, 754
NaeI GCCGGC 1 cut(s) 250
NarI GGCGCC 2 cut(s) 411, 590
NciI CCSGG 4 cut(s) 76, 536, 583, 614
NdeII GATC 2 cut(s) 454, 1012
NgoMIV GCCGGC 1 cut(s) 248
NlaIII CATG 3 cut(s) 353, 499, 1214
NlaIV GGNNCC 5 cut(s) 37, 412, 484, 501, 591
NmeAIII GCCGAG 2 cut(s) 20, 857
NmuCI GTSAC 5 cut(s) 285, 371, 383, 397, 964
NspI RCATGY 1 cut(s) 353
NspV TTCGAA 1 cut(s) 271
OliI CACNNNNGTG 1 cut(s) 803
PaeI GCATGC 1 cut(s) 353
PaeR7I CTCGAG 1 cut(s) 233
PceI AGGCCT 1 cut(s) 1133
PctI GAATGC 1 cut(s) 757
PdiI GCCGGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 3 cut(s) 142, 531, 661
PkrI GCNGC 2 cut(s) 188, 511
PleI GAGTC 2 cut(s) 304, 869
PluTI GGCGCC 2 cut(s) 414, 593
PpsI GAGTC 2 cut(s) 304, 869
PpuMI RGGWCCY 1 cut(s) 309
Psp1406I AACGTT 1 cut(s) 213
Psp5II RGGWCCY 1 cut(s) 309
PspN4I GGNNCC 5 cut(s) 37, 412, 484, 501, 591
PspPI GGNCC 1 cut(s) 309
PspPPI RGGWCCY 1 cut(s) 309
PspXI VCTCGAGB 1 cut(s) 233
RsaI GTAC 5 cut(s) 239, 366, 562, 629, 865
RsaNI GTAC 5 cut(s) 238, 365, 561, 628, 864
RseI CAYNNNNRTG 3 cut(s) 354, 572, 803
SaqAI TTAA 2 cut(s) 378, 932
SatI GCNGC 2 cut(s) 187, 510
Sau3AI GATC 2 cut(s) 454, 1012
Sau96I GGNCC 1 cut(s) 309
SchI GAGTC 2 cut(s) 305, 869
ScrFI CCNGG 4 cut(s) 76, 536, 583, 614
SduI GDGCHC 2 cut(s) 439, 1082
SfcI CTRYAG 1 cut(s) 1102
SfoI GGCGCC 2 cut(s) 412, 591
Sfr274I CTCGAG 1 cut(s) 233
SfuI TTCGAA 1 cut(s) 271
SinI GGWCC 1 cut(s) 309
SlaI CTCGAG 1 cut(s) 233
SmiMI CAYNNNNRTG 3 cut(s) 354, 572, 803
SmlI CTYRAG 2 cut(s) 233, 752
SmoI CTYRAG 2 cut(s) 233, 752
SphI GCATGC 1 cut(s) 353
Sse9I AATT 6 cut(s) 474, 692, 891, 940, 1045, 1193
SseBI AGGCCT 1 cut(s) 1133
SsiI CCGC 4 cut(s) 89, 282, 509, 539
SspDI GGCGCC 2 cut(s) 410, 589
SspI AATATT 1 cut(s) 391
SspMI CTAG 6 cut(s) 554, 600, 741, 882, 1050, 1056
StuI AGGCCT 1 cut(s) 1133
StyD4I CCNGG 4 cut(s) 74, 534, 581, 612
TaaI ACNGT 5 cut(s) 49, 632, 805, 900, 970
TaiI ACGT 3 cut(s) 132, 216, 445
TaqI TCGA 7 cut(s) 132, 234, 271, 439, 570, 895, 918
TaqII GACCGA 1 cut(s) 51
TasI AATT 6 cut(s) 474, 692, 891, 940, 1045, 1193
TatI WGTACW 3 cut(s) 364, 560, 627
TauI GCSGC 1 cut(s) 512
TfiI GAWTC 3 cut(s) 142, 531, 661
Tru1I TTAA 2 cut(s) 378, 932
Tru9I TTAA 2 cut(s) 378, 932
TscAI CASTG 1 cut(s) 975
TseFI GTSAC 5 cut(s) 285, 371, 383, 397, 964
TseI GCWGC 1 cut(s) 186
Tsp45I GTSAC 5 cut(s) 285, 371, 383, 397, 964
TspDTI ATGAA 4 cut(s) 17, 420, 1038, 1127
TspGWI ACGGA 1 cut(s) 215
TspRI CASTG 1 cut(s) 975
VpaK11BI GGWCC 1 cut(s) 309
XagI CCTNNNNNAGG 1 cut(s) 316
XapI RAATTY 4 cut(s) 692, 891, 1045, 1193
XceI RCATGY 1 cut(s) 353
XcmI CCANNNNNNNNNTGG 2 cut(s) 729, 805
XhoI CTCGAG 1 cut(s) 233
XmiI GTMKAC 2 cut(s) 149, 299
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 6 cut(s) 554, 600, 741, 882, 1050, 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.