AT4G28910

AFP homolog 2-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
14264034 .. 14266786
2753 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G28910.1

Sequence Viewer

Length: 1278 bp
ATGGACGATGATAATGGGCTCGAGCTCAGCTTGGGTCTTTCTTGTGGAGGATCAACAGGAAAAGCTAAGGGTAACAATAATAATAATGCTGGAAGCTCCTCAGAGAACTACAGGGCAGAAGGAGGCGATAGAAGTGCTAAAGTGATTGATGACTTTAAGAACTTCCTGCATCCAACTTCTCAAAGACCTGCAGAGCCGAGTTCTGGTTCTCAGAGAAGTGATTCGGGTCAACAGCCTCCACAAAATTTCTTCAATGACCTCTCAAAAGCTCCTACAACTGAGGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGATGAGTCACGGAAAGAAGCAGGGAACAAAAGAAAGTTCGGGTTCCCGGGGATGAATGATGATAAGAAAAAAGAGAAGGACTCGTCTCATGTTGATATGCATGAGAAGAAGACAAAAGCATCCCATGTTTCAACTGCGACAGATGAAGGATCAACAGCTGAAAACGAAGATGTAGCAGAGTCTGAAGTAGGTGGTGGTTCTTCTTCCAACCACGCAAAGGAGGTGGTTCGTCCTCCTACTGATACAAACATTGTGGACAACTTAACTGGTCAAAGGAGGAGCAACCATGGTGGATCTGGCACTGAAGAGTTTACAATGCGCAACATGAGTTACACCGTACCTTTCACAGTTCATCCGCAAAATGTCGTCACTAGTATGCCTTACTCTTTACCGACAAAAGAGTCTGGACAACACGCAGCAGCTACAAGTCTATTGCAGCCTAATGCTAATGCTGGAAATCTCCCGATTATGTTCGGATACTCACCAGTCCAGCTCCCTATGCTAGATAAGGACGGTTCAGGAGGGATTGTCGCACTTTCTCAATCTCCATTTGCTGGAAGAGTTCCATCAAACTCAGCTACTGCAAAAGGCGAAGGCAAACAACCTGTTGCAGAAGAAGGTTCATCCGAGGATGCATCAGAACGACCAACGGGAGACAACAGCAACCTCAATACCGCTTTCTCTTTCGACTTTTCTGCCATAAAACCTGGAATGGCAGCAGATGTGAAGTTTGGAGGATCCGGGGCACGTCCCAACTTACCGTGGGTCTCAACCACTGGTTCAGGCCCACACGGACGGACAATCTCAGGTGTCACATACCGGTACAACGCAAACCAGATCAAAATCGTATGCGCTTGCCACGGCTCGCACATGTCACCGGAGGAGTTTGTACGGCACGCAAGCGAGGAGTACGTTAGCCCAGAATCATCCATGGGAATGACTGCAGCGTCAGCTCACACCTGA

Protein Analysis

425

Amino Acids

44.94

Weight (kDa)

5.5

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010854)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 715, 1261
Acc16I TGCGCA 1 cut(s) 635
Acc36I ACCTGC 1 cut(s) 196
AccB7I CCANNNNNTGG 1 cut(s) 869
AciI CCGC 2 cut(s) 671, 990
AclWI GGATC 5 cut(s) 58, 472, 616, 1047, 1060
AcsI RAATTY 1 cut(s) 244
AcuI CTGAAG 3 cut(s) 306, 519, 639
AfaI GTAC 4 cut(s) 654, 1139, 1206, 1226
AfiI CCNNNNNNNGG 3 cut(s) 203, 532, 869
AflIII ACRYGT 1 cut(s) 1185
AgeI ACCGGT 1 cut(s) 1134
AgsI TTSAA 2 cut(s) 253, 447
AhlI ACTAGT 1 cut(s) 686
AjiI CACGTC 1 cut(s) 1064
AjnI CCWGG 1 cut(s) 1021
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 3 cut(s) 405, 963, 1087
AlwI GGATC 5 cut(s) 58, 472, 616, 1047, 1060
AlwNI CAGNNNCTG 2 cut(s) 497, 896
Ama87I CYCGRG 2 cut(s) 20, 361
AoxI GGCC 1 cut(s) 1099
ApeKI GCWGC 5 cut(s) 731, 734, 751, 1031, 1259
ApoI RAATTY 1 cut(s) 244
AsiGI ACCGGT 1 cut(s) 1134
Asp700I GAANNNNTTC 1 cut(s) 220
AspLEI GCGC 2 cut(s) 636, 1169
AspS9I GGNCC 1 cut(s) 1100
AsuC2I CCSGG 3 cut(s) 362, 363, 1057
AsuHPI GGTGA 2 cut(s) 789, 1182
AvaI CYCGRG 2 cut(s) 20, 361
BaeGI GKGCMC 1 cut(s) 1063
BamHI GGATCC 1 cut(s) 1052
BanII GRGCYC 2 cut(s) 21, 27
BbsI GAAGAC 1 cut(s) 431
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 5 cut(s) 743, 746, 763, 1043, 1271
BccI CCATC 1 cut(s) 889
BceAI ACGGC 2 cut(s) 1192, 1223
BcgI CGANNNNNNTGC 4 cut(s) 116, 150, 992, 1026
BciT130I CCWGG 1 cut(s) 1023
BciVI GTATCC 1 cut(s) 785
BcnI CCSGG 3 cut(s) 362, 363, 1057
BcoDI GTCTC 3 cut(s) 405, 963, 1087
BcuI ACTAGT 1 cut(s) 686
BfaI CTAG 2 cut(s) 687, 818
BfmI CTRYAG 3 cut(s) 109, 189, 1257
BfuAI ACCTGC 1 cut(s) 196
BfuI GTATCC 1 cut(s) 785
BisI GCNGC 5 cut(s) 732, 735, 752, 1032, 1260
BlpI GCTNAGC 1 cut(s) 26
BlsI GCNGC 5 cut(s) 733, 736, 753, 1033, 1261
Bme1390I CCNGG 4 cut(s) 362, 363, 1023, 1057
BmeT110I CYCGRG 2 cut(s) 20, 361
BmgBI CACGTC 1 cut(s) 1064
BmgT120I GGNCC 1 cut(s) 1100
BmiI GGNNCC 2 cut(s) 359, 1054
BmrFI CCNGG 4 cut(s) 362, 363, 1023, 1057
BmsI GCATC 4 cut(s) 178, 443, 937, 959
BpiI GAAGAC 1 cut(s) 431
BplI GAGNNNNNCTC 2 cut(s) 380, 412
Bpu10I CCTNAGC 1 cut(s) 66
Bpu1102I GCTNAGC 1 cut(s) 26
BpuMI CCSGG 3 cut(s) 362, 363, 1057
BsaBI GATNNNNATC 1 cut(s) 1157
BsaI GGTCTC 1 cut(s) 1087
BsaJI CCNNGG 8 cut(s) 361, 362, 601, 942, 1056, 1076, 1174, 1245
BsaWI WCCGGW 2 cut(s) 1134, 1192
BsaXI ACNNNNNCTCC 4 cut(s) 305, 335, 828, 858
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 532, 869
Bse118I RCCGGY 1 cut(s) 1134
Bse1I ACTGG 3 cut(s) 586, 800, 1096
Bse8I GATNNNNATC 1 cut(s) 1157
BseBI CCWGG 1 cut(s) 1023
BseDI CCNNGG 8 cut(s) 361, 362, 601, 942, 1056, 1076, 1174, 1245
BseGI GGATG 8 cut(s) 169, 322, 372, 434, 667, 938, 952, 1241
BseJI GATNNNNATC 1 cut(s) 1157
BseLI CCNNNNNNNGG 3 cut(s) 203, 532, 869
BseMII CTCAG 6 cut(s) 40, 114, 224, 270, 903, 1134
BseNI ACTGG 3 cut(s) 586, 800, 1096
BseRI GAGGAG 4 cut(s) 88, 607, 1211, 1235
BseSI GKGCMC 1 cut(s) 1063
BseXI GCAGC 5 cut(s) 743, 746, 763, 1043, 1271
BshFI GGCC 1 cut(s) 1101
BshTI ACCGGT 1 cut(s) 1134
BsiHKAI GWGCWC 1 cut(s) 27
BsiHKCI CYCGRG 2 cut(s) 20, 361
BsiSI CCGG 4 cut(s) 362, 1056, 1135, 1193
BslFI GGGAC 1 cut(s) 1050
BslI CCNNNNNNNGG 3 cut(s) 203, 532, 869
BsmAI GTCTC 3 cut(s) 405, 963, 1087
BsmBI CGTCTC 1 cut(s) 405
BsmFI GGGAC 1 cut(s) 1050
BsnI GGCC 1 cut(s) 1101
Bso31I GGTCTC 1 cut(s) 1087
BsoBI CYCGRG 2 cut(s) 20, 361
Bsp1286I GDGCHC 3 cut(s) 21, 27, 1063
Bsp143I GATC 5 cut(s) 50, 464, 608, 1052, 1152
Bsp1720I GCTNAGC 1 cut(s) 26
Bsp19I CCATGG 2 cut(s) 601, 1245
BspACI CCGC 2 cut(s) 671, 990
BspANI GGCC 1 cut(s) 1101
BspCNI CTCAG 6 cut(s) 39, 113, 223, 271, 902, 1133
BspLI GGNNCC 2 cut(s) 359, 1054
BspMAI CTGCAG 2 cut(s) 193, 1261
BspMI ACCTGC 1 cut(s) 196
BspPI GGATC 5 cut(s) 58, 472, 616, 1047, 1060
BspTNI GGTCTC 1 cut(s) 1087
BsrFI RCCGGY 1 cut(s) 1134
BsrI ACTGG 3 cut(s) 586, 800, 1096
BssAI RCCGGY 1 cut(s) 1134
BssECI CCNNGG 8 cut(s) 361, 362, 601, 942, 1056, 1076, 1174, 1245
BssMI GATC 5 cut(s) 50, 464, 608, 1052, 1152
BssT1I CCWWGG 2 cut(s) 601, 1245
Bst2UI CCWGG 1 cut(s) 1023
Bst4CI ACNGT 4 cut(s) 652, 664, 830, 1077
Bst6I CTCTTC 2 cut(s) 615, 868
BstC8I GCNNGC 4 cut(s) 1171, 1181, 1212, 1216
BstDEI CTNAG 7 cut(s) 26, 66, 100, 210, 279, 889, 1120
BstDSI CCRYGG 4 cut(s) 601, 1076, 1174, 1245
BstF5I GGATG 8 cut(s) 169, 322, 372, 434, 667, 938, 952, 1241
BstHHI GCGC 2 cut(s) 636, 1169
BstKTI GATC 5 cut(s) 53, 467, 611, 1055, 1155
BstMAI GTCTC 3 cut(s) 405, 963, 1087
BstMBI GATC 5 cut(s) 50, 464, 608, 1052, 1152
BstMWI GCNNNNNNNGC 2 cut(s) 814, 1265
BstNI CCWGG 1 cut(s) 1023
BstNSI RCATGY 1 cut(s) 1189
BstSCI CCNGG 4 cut(s) 360, 361, 1021, 1055
BstSFI CTRYAG 3 cut(s) 109, 189, 1257
BstSLI GKGCMC 1 cut(s) 1063
BstV1I GCAGC 5 cut(s) 743, 746, 763, 1043, 1271
BstV2I GAAGAC 1 cut(s) 431
BstX2I RGATCY 2 cut(s) 608, 1052
BstYI RGATCY 2 cut(s) 608, 1052
BsuI GTATCC 1 cut(s) 785
BsuRI GGCC 1 cut(s) 1101
BtgI CCRYGG 4 cut(s) 601, 1076, 1174, 1245
BtrI CACGTC 1 cut(s) 1064
BtsCI GGATG 8 cut(s) 169, 322, 372, 434, 667, 938, 952, 1241
BtsIMutI CAGTG 2 cut(s) 615, 1089
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 4 cut(s) 1171, 1181, 1212, 1216
CaiI CAGNNNCTG 2 cut(s) 497, 896
CfoI GCGC 2 cut(s) 636, 1169
Cfr10I RCCGGY 1 cut(s) 1134
Cfr13I GGNCC 1 cut(s) 1100
Cfr9I CCCGGG 1 cut(s) 361
CseI GACGC 1 cut(s) 1251
Csp6I GTAC 4 cut(s) 653, 1138, 1205, 1225
CspAI ACCGGT 1 cut(s) 1134
CspCI CAANNNNNGTGG 6 cut(s) 519, 549, 554, 584, 586, 621
CviAII CATG 7 cut(s) 404, 416, 440, 602, 640, 1186, 1246
CviQI GTAC 4 cut(s) 653, 1138, 1205, 1225
DdeI CTNAG 7 cut(s) 26, 66, 100, 210, 279, 889, 1120
DpnI GATC 5 cut(s) 52, 466, 610, 1054, 1154
DpnII GATC 5 cut(s) 50, 464, 608, 1052, 1152
DrdI GACNNNNNNGTC 2 cut(s) 715, 1261
DseDI GACNNNNNNGTC 2 cut(s) 715, 1261
Eam1104I CTCTTC 2 cut(s) 615, 868
EarI CTCTTC 2 cut(s) 615, 868
Ecl136II GAGCTC 1 cut(s) 25
Eco130I CCWWGG 2 cut(s) 601, 1245
Eco24I GRGCYC 2 cut(s) 21, 27
Eco31I GGTCTC 1 cut(s) 1087
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 3 cut(s) 306, 519, 639
Eco88I CYCGRG 2 cut(s) 20, 361
EcoICRI GAGCTC 1 cut(s) 25
EcoRII CCWGG 1 cut(s) 1021
EcoT14I CCWWGG 2 cut(s) 601, 1245
EcoT22I ATGCAT 2 cut(s) 417, 952
EcoT38I GRGCYC 2 cut(s) 21, 27
ErhI CCWWGG 2 cut(s) 601, 1245
Esp3I CGTCTC 1 cut(s) 405
FaeI CATG 7 cut(s) 407, 419, 443, 605, 643, 1189, 1249
FaqI GGGAC 1 cut(s) 1050
FatI CATG 7 cut(s) 403, 415, 439, 601, 639, 1185, 1245
Fnu4HI GCNGC 5 cut(s) 732, 735, 752, 1032, 1260
FokI GGATG 8 cut(s) 156, 329, 379, 421, 654, 925, 959, 1228
FriOI GRGCYC 2 cut(s) 21, 27
Fsp4HI GCNGC 5 cut(s) 732, 735, 752, 1032, 1260
FspBI CTAG 2 cut(s) 687, 818
FspI TGCGCA 1 cut(s) 635
GlaI GCGC 2 cut(s) 635, 1168
GluI GCNGC 5 cut(s) 732, 735, 752, 1032, 1260
HaeIII GGCC 1 cut(s) 1101
HapII CCGG 4 cut(s) 362, 1056, 1135, 1193
HgaI GACGC 1 cut(s) 1251
HhaI GCGC 2 cut(s) 636, 1169
Hin1II CATG 7 cut(s) 407, 419, 443, 605, 643, 1189, 1249
Hin6I GCGC 2 cut(s) 634, 1167
HinP1I GCGC 2 cut(s) 634, 1167
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HindIII AAGCTT 1 cut(s) 288
HinfI GANTC 6 cut(s) 221, 320, 395, 494, 716, 1238
HpaII CCGG 4 cut(s) 362, 1056, 1135, 1193
HphI GGTGA 2 cut(s) 789, 1182
Hpy166II GTNNAC 3 cut(s) 230, 571, 627
Hpy188I TCNGA 6 cut(s) 103, 213, 499, 791, 943, 955
Hpy188III TCNNGA 3 cut(s) 720, 778, 834
Hpy8I GTNNAC 3 cut(s) 230, 571, 627
HpyAV CCTTC 5 cut(s) 113, 385, 455, 902, 926
HpyCH4III ACNGT 4 cut(s) 652, 664, 830, 1077
HpyCH4IV ACGT 2 cut(s) 1063, 1227
HpyCH4V TGCA 8 cut(s) 169, 191, 415, 751, 899, 926, 950, 1259
HpyF10VI GCNNNNNNNGC 2 cut(s) 814, 1265
HpyF3I CTNAG 7 cut(s) 26, 66, 100, 210, 279, 889, 1120
HpySE526I ACGT 2 cut(s) 1063, 1227
Hsp92II CATG 7 cut(s) 407, 419, 443, 605, 643, 1189, 1249
HspAI GCGC 2 cut(s) 634, 1167
Kzo9I GATC 5 cut(s) 50, 464, 608, 1052, 1152
LmnI GCTCC 4 cut(s) 101, 274, 594, 813
Lsp1109I GCAGC 5 cut(s) 743, 746, 763, 1043, 1271
LweI GCATC 4 cut(s) 178, 443, 937, 959
MaeI CTAG 2 cut(s) 687, 818
MaeII ACGT 2 cut(s) 1063, 1227
MaeIII GTNAC 6 cut(s) 71, 321, 644, 682, 1126, 1188
MalI GATC 5 cut(s) 52, 466, 610, 1054, 1154
MboI GATC 5 cut(s) 50, 464, 608, 1052, 1152
MboII GAAGA 9 cut(s) 241, 433, 436, 494, 507, 510, 632, 885, 941
MflI RGATCY 2 cut(s) 608, 1052
MhlI GDGCHC 3 cut(s) 21, 27, 1063
MluCI AATT 1 cut(s) 244
MlyI GAGTC 4 cut(s) 329, 389, 503, 725
MmeI TCCRAC 2 cut(s) 197, 546
Mph1103I ATGCAT 2 cut(s) 417, 952
MroXI GAANNNNTTC 1 cut(s) 220
MseI TTAA 2 cut(s) 156, 578
MslI CAYNNNNRTG 2 cut(s) 689, 1250
MspA1I CMGCKG 1 cut(s) 473
MspI CCGG 4 cut(s) 362, 1056, 1135, 1193
MspR9I CCNGG 4 cut(s) 362, 363, 1023, 1057
MvaI CCWGG 1 cut(s) 1023
MwoI GCNNNNNNNGC 2 cut(s) 814, 1265
NciI CCSGG 3 cut(s) 362, 363, 1057
NcoI CCATGG 2 cut(s) 601, 1245
NdeII GATC 5 cut(s) 50, 464, 608, 1052, 1152
NlaIII CATG 7 cut(s) 407, 419, 443, 605, 643, 1189, 1249
NlaIV GGNNCC 2 cut(s) 359, 1054
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 4 cut(s) 321, 682, 1126, 1188
NsbI TGCGCA 1 cut(s) 635
NsiI ATGCAT 2 cut(s) 417, 952
NspI RCATGY 1 cut(s) 1189
PaeR7I CTCGAG 1 cut(s) 20
PciI ACATGT 1 cut(s) 1185
PdmI GAANNNNTTC 1 cut(s) 220
PfeI GAWTC 2 cut(s) 221, 1238
PflMI CCANNNNNTGG 1 cut(s) 869
PinAI ACCGGT 1 cut(s) 1134
PkrI GCNGC 5 cut(s) 733, 736, 753, 1033, 1261
PleI GAGTC 4 cut(s) 328, 389, 502, 724
PpsI GAGTC 4 cut(s) 328, 389, 502, 724
PscI ACATGT 1 cut(s) 1185
Psp124BI GAGCTC 1 cut(s) 27
Psp6I CCWGG 1 cut(s) 1021
PspGI CCWGG 1 cut(s) 1021
PspN4I GGNNCC 2 cut(s) 359, 1054
PspPI GGNCC 1 cut(s) 1100
PspXI VCTCGAGB 1 cut(s) 20
PstI CTGCAG 2 cut(s) 193, 1261
PstNI CAGNNNCTG 2 cut(s) 497, 896
PsuI RGATCY 2 cut(s) 608, 1052
PvuII CAGCTG 1 cut(s) 473
RsaI GTAC 4 cut(s) 654, 1139, 1206, 1226
RsaNI GTAC 4 cut(s) 653, 1138, 1205, 1225
RseI CAYNNNNRTG 2 cut(s) 689, 1250
SacI GAGCTC 1 cut(s) 27
SaqAI TTAA 2 cut(s) 156, 578
SatI GCNGC 5 cut(s) 732, 735, 752, 1032, 1260
Sau3AI GATC 5 cut(s) 50, 464, 608, 1052, 1152
Sau96I GGNCC 1 cut(s) 1100
SchI GAGTC 4 cut(s) 329, 389, 503, 725
ScrFI CCNGG 4 cut(s) 362, 363, 1023, 1057
SduI GDGCHC 3 cut(s) 21, 27, 1063
SfaNI GCATC 4 cut(s) 178, 443, 937, 959
SfcI CTRYAG 3 cut(s) 109, 189, 1257
Sfr274I CTCGAG 1 cut(s) 20
SlaI CTCGAG 1 cut(s) 20
SmaI CCCGGG 1 cut(s) 363
SmiMI CAYNNNNRTG 2 cut(s) 689, 1250
SmlI CTYRAG 1 cut(s) 20
SmoI CTYRAG 1 cut(s) 20
SpeI ACTAGT 1 cut(s) 686
Sse9I AATT 1 cut(s) 244
SsiI CCGC 2 cut(s) 671, 990
SspMI CTAG 2 cut(s) 687, 818
SstI GAGCTC 1 cut(s) 27
StyD4I CCNGG 4 cut(s) 360, 361, 1021, 1055
StyI CCWWGG 2 cut(s) 601, 1245
TaaI ACNGT 4 cut(s) 652, 664, 830, 1077
TaiI ACGT 2 cut(s) 1066, 1230
TaqI TCGA 2 cut(s) 21, 1002
TasI AATT 1 cut(s) 244
TfiI GAWTC 2 cut(s) 221, 1238
Tru1I TTAA 2 cut(s) 156, 578
Tru9I TTAA 2 cut(s) 156, 578
TscAI CASTG 2 cut(s) 622, 1096
TseFI GTSAC 4 cut(s) 321, 682, 1126, 1188
TseI GCWGC 5 cut(s) 731, 734, 751, 1031, 1259
Tsp45I GTSAC 4 cut(s) 321, 682, 1126, 1188
TspDTI ATGAA 4 cut(s) 383, 474, 656, 927
TspGWI ACGGA 3 cut(s) 340, 1122, 1126
TspMI CCCGGG 1 cut(s) 361
TspRI CASTG 2 cut(s) 622, 1096
Van91I CCANNNNNTGG 1 cut(s) 869
XapI RAATTY 1 cut(s) 244
XceI RCATGY 1 cut(s) 1189
XcmI CCANNNNNNNNNTGG 1 cut(s) 608
XhoI CTCGAG 1 cut(s) 20
XmaI CCCGGG 1 cut(s) 361
XmnI GAANNNNTTC 1 cut(s) 220
XspI CTAG 2 cut(s) 687, 818
Zsp2I ATGCAT 2 cut(s) 417, 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.