Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005879

Physical Location & Seq

Genomic Coordinates Reverse (-)

15132011 .. 15136696

Gene Structure 4686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G31120.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGCCGCTCGGAGAGAGAGGAGGATGGGAGAGGACCGAGTCCAGATACTGCGGCGTTGAGACTGATTTCTCCAACGATGTTACTCATCTTCTCAACTTCAACATTTCCACCGGCGGTTTTGACTATGTTCTCGCTCCTCTGGTGGATCCTTCGTATAGGCCGAGCTTGGTGGAAGGAAATGGTGTAGATACTCAGGTTCTTCCAGTCTGTGGCTCTGACTTAGTCTTGTCACCTTCTCAATGGAGCAGTCATGTTGTTGGAAAAATTAGTTCGTGGATTGACTTGGATTCTGAAGATGAGGTCTTACGGATGGATTCAGAAACCACATTGAAGCAAGAAATAGCTTGGGCTACTCATCTCTCCTTACAGGCATGCCTTCTTCCCACTCCTAAAGGGAAATCGTGCGCCAATTATGCCAGATGTGTGAACCAGATCTTACAAGGCCTCACTACCTTGCAGTTATGGCTAAGGGTTCCACTGGTGAAGTCTGAAGGTGATTCAATGGATGATACCTCAGAGGGACTGAATGATTCCTGGGAGCTGTGGAATTCGTTTCGTCTTCTTTGTGAGCATGACAGTAAGCTGTCTGTTGCTCTTGATGTTCTGAGTACACTACCCTCTGAAACTTCACTAGGGCGCTGGATGGGAGAGTCTGTGAGAGCAGCCATATTAAGCACTGATGCTTTCTTAACAAATGCTCGGGGTTATCCTTGCTTGTCCAAACGCCACCAAAAGTTAATAGCAGGATTTTTTGATCATGCTGCCCAGGTTGTAATTTGTGGAAAGCCTGTTCATAATCTTCAAAAGCCTCTTGATTCTAGCTCGGAGGGTACAGAGAAGAATCCTCTGCGCATATATTTGGACTATGTTGCTTATCTGTTCCAAAAGATGGAATCACTTTCTGAACAGGAACGCATCGAGCTGGGTTACAGGGATTTTTTGCAGGCACCCCTGCAGCCTCTTATGGACAACCTCGAAGCCCAAACCTATGAGACGTTTGAGAGAGACTCTGTTAAATACATCCAATATCAAAGAGCAGTTGAGAAAGCCTTGGTGGACAGGGTACCTGATGAAAAAGCATCCGAGTTGACTACTGTCCTGATGGTTGTGGGGGCAGGAAGGGGACCCCTTGTGAGGGCATCGTTACAGGCAGCTGAAGAAACTGATCGGAAGTTGAAAGTTTATGCCGTGGAAAAGAATCCTAATGCCGTTGTAACACTCCATAATTTGGTTAAGATGGAAGGATGGGAAGACGTTGTTACGATAATATCCTGTGACATGCGTTTTTGGAATGCTCCCGAGCAAGCTGATATATTGGTTAGCGAACTGCTGGGTTCTTTTGGAGACAATGAACTTTCTCCTGAGTGTCTTGATGGAGCCCAAAGGTTTCTGAAGCCAGACGGAATTTCAATACCATCCTCGTATACAAGTTTCATACAGCCTATAACAGCTTCGAAGCTTTACAATGACGTTAAGGCTCATAAAGATCTTGCGCACTTTGAAACTGCTTATGTTGTCAAGCTGCATAGTGTAGCAAAGCTTGCTCCTTCCCAGTCTGTTTTCACATTTACTCATCCAAACTTCTCAACGAAAGTCAACAACCAACGCTATAAGAAGCTTCAGTTCAGTCTACCAAGCGATGCTGGCTCAGCTTTGGTGCATGGATTCGCTGGCTATTTTGATTCCGTCCTTTATAAAGATGTTCATCTTGGGATCGAGCCTACAACAGCAACACCAAACATGTTCAGCTGGTTCCCAATCTTTTTCCCATTGAGGAAGCCTGTGGAGGTTCACCCTGATACTCCATTAGAAGTACACTTTTGGAGGTGTTGTGGTTCCTCAAAGGTTTGGTATGAATGGTCGGTGTCTTCACCTACTCCATCTCCGATGCATAACACCAATGGCCGTTCGTACTGGGTTGGCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009909 GO:0009987 GO:0010219 GO:0010220 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019918 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043985 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048580 GO:0048583 GO:0048584 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0140096 GO:1901564 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 ko04011 ko04111 map03013 map04011 map04111

Pfam Domains

Protein Families

PRMT5 PRMT5_C PRMT5_TIM

Protein Analysis

642

Amino Acids

71.87

Weight (kDa)

5.31

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRMT5_TIM	PF17285	39 - 296	9.2e-85	PRMT5 TIM barrel domain
PRMT5	PF05185	302 - 471	1.6e-73	PRMT5 arginine-N-methyltransferase
PRMT5_C	PF17286	474 - 584	5.3e-37	PRMT5 oligomerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31120 AT4G31120
fragaria_vesca	FvH4_2g30610 FvH4_2g30610 FvH4_2g30610 FvH4_2g30610 FvH4_2g30610
malus_domestica	MD08G1132700.v1.1 MD15G1111800.v1.1 MD15G1112100.v1.1 MD15G1112600.v1.1 MD15G1112700.v1.1
prunus_persica	Prupe.1G463300_v2.0.a1 Prupe.1G463300_v2.0.a1
pyrus_communis	pycom08g11190 pycom15g10130
rosa_chinensis	RchiOBHm_Chr6g0312391
rosa_laevigata	RLG00000010331
rosa_multiflora	Rmu_sc0028838.1_g000001 Rmu_sc0031621.1_g000001 Rmu_ssc0000424.1_g000022
rosa_roxburghii	Rroxscaffold_7G00156840
rosa_rugosa	Rorug06G0395500
rosa_samantha	Rh6AG512700 Rh6BG523600 Rh6CG529000 Rh6DG514900
rosa_wichuraiana	Rw6G044560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1695
Acc16I	TGCGCA	2 cut(s)	851, 1494
Acc65I	GGTACC	1 cut(s)	1063
AccB1I	GGYRCC	2 cut(s)	946, 1063
AccB7I	CCANNNNNTGG	3 cut(s)	209, 889, 1228
AccBSI	CCGCTC	1 cut(s)	7
AccI	GTMKAC	2 cut(s)	1424, 1630
AciI	CCGC	3 cut(s)	5, 51, 114
AclWI	GGATC	3 cut(s)	140, 153, 1721
AcoI	YGGCCR	1 cut(s)	1903
AcsI	RAATTY	2 cut(s)	547, 1404
AcuI	CTGAAG	5 cut(s)	312, 510, 1176, 1412, 1604
AfaI	GTAC	5 cut(s)	610, 832, 1065, 1815, 1913
AfiI	CCNNNNNNNGG	5 cut(s)	209, 889, 1134, 1135, 1228
AflIII	ACRYGT	1 cut(s)	1740
AgsI	TTSAA	7 cut(s)	100, 331, 501, 803, 1177, 1410, 1502
AjnI	CCWGG	2 cut(s)	533, 765
AloI	GAACNNNNNNTCC	2 cut(s)	774, 806
Alw26I	GTCTC	4 cut(s)	53, 986, 999, 1338
AlwI	GGATC	3 cut(s)	140, 153, 1721
AlwNI	CAGNNNCTG	1 cut(s)	48
Ama87I	CYCGRG	2 cut(s)	699, 1298
AoxI	GGCC	4 cut(s)	158, 442, 1903, 1921
ApeKI	GCWGC	5 cut(s)	662, 761, 955, 1151, 1522
ApoI	RAATTY	2 cut(s)	547, 1404
Asp718I	GGTACC	1 cut(s)	1063
AspLEI	GCGC	4 cut(s)	407, 639, 852, 1495
AspS9I	GGNCC	2 cut(s)	33, 1124
AsuHPI	GGTGA	5 cut(s)	222, 493, 506, 1784, 1863
AsuII	TTCGAA	1 cut(s)	1454
AvaI	CYCGRG	2 cut(s)	699, 1298
AvaII	GGWCC	2 cut(s)	33, 1124
BaeI	ACNNNNGTAYC	2 cut(s)	180, 213
BamHI	GGATCC	1 cut(s)	145
BanI	GGYRCC	2 cut(s)	946, 1063
BanII	GRGCYC	1 cut(s)	1381
BbsI	GAAGAC	3 cut(s)	551, 1257, 1860
BbvI	GCAGC	5 cut(s)	674, 748, 967, 1163, 1509
BceAI	ACGGC	3 cut(s)	1172, 1193, 1890
BciT130I	CCWGG	2 cut(s)	535, 767
BclI	TGATCA	1 cut(s)	754
BcoDI	GTCTC	4 cut(s)	53, 986, 999, 1338
BfaI	CTAG	2 cut(s)	632, 819
BfmI	CTRYAG	1 cut(s)	953
BfoI	RGCGCY	1 cut(s)	640
BglII	AGATCT	2 cut(s)	432, 1486
BisI	GCNGC	7 cut(s)	5, 52, 663, 762, 956, 1152, 1523
BlpI	GCTNAGC	1 cut(s)	1648
BlsI	GCNGC	7 cut(s)	6, 53, 664, 763, 957, 1153, 1524
Bme1390I	CCNGG	2 cut(s)	535, 767
Bme18I	GGWCC	2 cut(s)	33, 1124
BmeT110I	CYCGRG	2 cut(s)	699, 1298
BmgT120I	GGNCC	2 cut(s)	33, 1124
BmiI	GGNNCC	9 cut(s)	147, 474, 948, 1065, 1125, 1126, 1378, 1754, 1837
BmrFI	CCNGG	2 cut(s)	535, 767
BmrI	ACTGGG	2 cut(s)	1546, 1924
BmsI	GCATC	6 cut(s)	670, 924, 1088, 1148, 1630, 1878
BmuI	ACTGGG	2 cut(s)	1546, 1924
BoxI	GACNNNNGTC	1 cut(s)	1094
BpiI	GAAGAC	3 cut(s)	551, 1257, 1860
BplI	GAGNNNNNCTC	2 cut(s)	992, 1024
Bpu10I	CCTNAGC	1 cut(s)	467
Bpu1102I	GCTNAGC	1 cut(s)	1648
Bpu14I	TTCGAA	1 cut(s)	1454
BsaBI	GATNNNNATC	1 cut(s)	1704
BsaJI	CCNNGG	4 cut(s)	534, 765, 1050, 1188
BsaXI	ACNNNNNCTCC	6 cut(s)	639, 669, 1816, 1846, 1867, 1897
Bsc4I	CCNNNNNNNGG	5 cut(s)	209, 889, 1134, 1135, 1228
Bse118I	RCCGGY	1 cut(s)	110
Bse1I	ACTGG	4 cut(s)	203, 483, 1552, 1919
Bse8I	GATNNNNATC	1 cut(s)	1704
BseBI	CCWGG	2 cut(s)	535, 767
BseDI	CCNNGG	4 cut(s)	534, 765, 1050, 1188
BseGI	GGATG	9 cut(s)	29, 315, 511, 648, 1020, 1079, 1250, 1415, 1573
BseJI	GATNNNNATC	1 cut(s)	1704
BseLI	CCNNNNNNNGG	5 cut(s)	209, 889, 1134, 1135, 1228
BseMII	CTCAG	5 cut(s)	206, 528, 596, 1353, 1662
BseNI	ACTGG	4 cut(s)	203, 483, 1552, 1919
BseRI	GAGGAG	2 cut(s)	33, 126
BseXI	GCAGC	5 cut(s)	674, 748, 967, 1163, 1509
BseYI	CCCAGC	2 cut(s)	922, 1330
BshFI	GGCC	4 cut(s)	160, 444, 1905, 1923
BshNI	GGYRCC	2 cut(s)	946, 1063
BsiHKCI	CYCGRG	2 cut(s)	699, 1298
BsiSI	CCGG	1 cut(s)	111
BslFI	GGGAC	2 cut(s)	534, 1137
BslI	CCNNNNNNNGG	5 cut(s)	209, 889, 1134, 1135, 1228
BsmAI	GTCTC	4 cut(s)	53, 986, 999, 1338
BsmBI	CGTCTC	1 cut(s)	986
BsmFI	GGGAC	2 cut(s)	534, 1137
BsmI	GAATGC	1 cut(s)	1297
BsnI	GGCC	4 cut(s)	160, 444, 1905, 1923
BsoBI	CYCGRG	2 cut(s)	699, 1298
Bsp119I	TTCGAA	1 cut(s)	1454
Bsp1286I	GDGCHC	1 cut(s)	1381
Bsp143I	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
Bsp1720I	GCTNAGC	1 cut(s)	1648
BspACI	CCGC	3 cut(s)	5, 51, 114
BspANI	GGCC	4 cut(s)	160, 444, 1905, 1923
BspCNI	CTCAG	5 cut(s)	205, 527, 597, 1354, 1661
BspLI	GGNNCC	9 cut(s)	147, 474, 948, 1065, 1125, 1126, 1378, 1754, 1837
BspMAI	CTGCAG	1 cut(s)	957
BspPI	GGATC	3 cut(s)	140, 153, 1721
BspT104I	TTCGAA	1 cut(s)	1454
BspT107I	GGYRCC	2 cut(s)	946, 1063
BsrBI	CCGCTC	1 cut(s)	7
BsrFI	RCCGGY	1 cut(s)	110
BsrI	ACTGG	4 cut(s)	203, 483, 1552, 1919
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	4 cut(s)	534, 765, 1050, 1188
BssMI	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
BssNAI	GTATAC	1 cut(s)	1425
BssT1I	CCWWGG	1 cut(s)	1050
Bst1107I	GTATAC	1 cut(s)	1425
Bst2UI	CCWGG	2 cut(s)	535, 767
Bst4CI	ACNGT	2 cut(s)	578, 1096
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstBI	TTCGAA	1 cut(s)	1454
BstC8I	GCNNGC	6 cut(s)	373, 945, 1305, 1542, 1645, 1672
BstDEI	CTNAG	7 cut(s)	192, 220, 467, 514, 605, 1362, 1648
BstDSI	CCRYGG	1 cut(s)	1188
BstF5I	GGATG	9 cut(s)	29, 315, 511, 648, 1020, 1079, 1250, 1415, 1573
BstH2I	RGCGCY	1 cut(s)	640
BstHHI	GCGC	4 cut(s)	407, 639, 852, 1495
BstKTI	GATC	6 cut(s)	148, 435, 757, 1168, 1489, 1716
BstMAI	GTCTC	4 cut(s)	53, 986, 999, 1338
BstMBI	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
BstMWI	GCNNNNNNNGC	5 cut(s)	413, 463, 1541, 1644, 1649
BstNI	CCWGG	2 cut(s)	535, 767
BstNSI	RCATGY	3 cut(s)	375, 1282, 1744
BstPAI	GACNNNNGTC	1 cut(s)	1094
BstSCI	CCNGG	2 cut(s)	533, 765
BstSFI	CTRYAG	1 cut(s)	953
BstV1I	GCAGC	5 cut(s)	674, 748, 967, 1163, 1509
BstV2I	GAAGAC	3 cut(s)	551, 1257, 1860
BstX2I	RGATCY	3 cut(s)	145, 432, 1486
BstYI	RGATCY	3 cut(s)	145, 432, 1486
BstZ17I	GTATAC	1 cut(s)	1425
BsuRI	GGCC	4 cut(s)	160, 444, 1905, 1923
BtgI	CCRYGG	1 cut(s)	1188
BtgZI	GCGATG	1 cut(s)	1653
BtsCI	GGATG	9 cut(s)	29, 315, 511, 648, 1020, 1079, 1250, 1415, 1573
BtsIMutI	CAGTG	2 cut(s)	476, 675
Cac8I	GCNNGC	6 cut(s)	373, 945, 1305, 1542, 1645, 1672
CaiI	CAGNNNCTG	1 cut(s)	48
CfoI	GCGC	4 cut(s)	407, 639, 852, 1495
Cfr10I	RCCGGY	1 cut(s)	110
Cfr13I	GGNCC	2 cut(s)	33, 1124
Csp6I	GTAC	5 cut(s)	609, 831, 1064, 1814, 1912
CviAII	CATG	7 cut(s)	251, 372, 572, 758, 1279, 1661, 1741
CviQI	GTAC	5 cut(s)	609, 831, 1064, 1814, 1912
DdeI	CTNAG	7 cut(s)	192, 220, 467, 514, 605, 1362, 1648
DpnI	GATC	6 cut(s)	147, 434, 756, 1167, 1488, 1715
DpnII	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
EaeI	YGGCCR	1 cut(s)	1903
Eco130I	CCWWGG	1 cut(s)	1050
Eco147I	AGGCCT	1 cut(s)	444
Eco24I	GRGCYC	1 cut(s)	1381
Eco47I	GGWCC	2 cut(s)	33, 1124
Eco57I	CTGAAG	5 cut(s)	312, 510, 1176, 1412, 1604
Eco88I	CYCGRG	2 cut(s)	699, 1298
EcoO109I	RGGNCCY	1 cut(s)	1124
EcoRI	GAATTC	1 cut(s)	547
EcoRII	CCWGG	2 cut(s)	533, 765
EcoT14I	CCWWGG	1 cut(s)	1050
EcoT22I	ATGCAT	1 cut(s)	1893
EcoT38I	GRGCYC	1 cut(s)	1381
ErhI	CCWWGG	1 cut(s)	1050
Esp3I	CGTCTC	1 cut(s)	986
FaeI	CATG	7 cut(s)	254, 375, 575, 761, 1282, 1664, 1744
FaqI	GGGAC	2 cut(s)	534, 1137
FatI	CATG	7 cut(s)	250, 371, 571, 757, 1278, 1660, 1740
FbaI	TGATCA	1 cut(s)	754
FblI	GTMKAC	2 cut(s)	1424, 1630
Fnu4HI	GCNGC	7 cut(s)	5, 52, 663, 762, 956, 1152, 1523
FokI	GGATG	9 cut(s)	36, 322, 518, 655, 1007, 1066, 1257, 1402, 1560
FriOI	GRGCYC	1 cut(s)	1381
Fsp4HI	GCNGC	7 cut(s)	5, 52, 663, 762, 956, 1152, 1523
FspBI	CTAG	2 cut(s)	632, 819
FspI	TGCGCA	2 cut(s)	851, 1494
GlaI	GCGC	4 cut(s)	406, 638, 851, 1494
GluI	GCNGC	7 cut(s)	5, 52, 663, 762, 956, 1152, 1523
GsaI	CCCAGC	2 cut(s)	926, 1334
HaeII	RGCGCY	1 cut(s)	640
HaeIII	GGCC	4 cut(s)	160, 444, 1905, 1923
HapII	CCGG	1 cut(s)	111
HhaI	GCGC	4 cut(s)	407, 639, 852, 1495
Hin1II	CATG	7 cut(s)	254, 375, 575, 761, 1282, 1664, 1744
Hin6I	GCGC	4 cut(s)	405, 637, 850, 1493
HinP1I	GCGC	4 cut(s)	405, 637, 850, 1493
HincII	GTYRAC	2 cut(s)	1089, 1597
HindII	GTYRAC	2 cut(s)	1089, 1597
HindIII	AAGCTT	3 cut(s)	1457, 1538, 1616
HpaII	CCGG	1 cut(s)	111
HphI	GGTGA	5 cut(s)	222, 493, 506, 1784, 1863
Hpy166II	GTNNAC	9 cut(s)	427, 611, 1057, 1089, 1425, 1597, 1631, 1792, 1816
Hpy188III	TCNNGA	7 cut(s)	42, 596, 812, 1099, 1298, 1361, 1370
Hpy8I	GTNNAC	9 cut(s)	427, 611, 1057, 1089, 1425, 1597, 1631, 1792, 1816
HpyAV	CCTTC	8 cut(s)	159, 167, 243, 386, 485, 1113, 1235, 1557
HpyCH4III	ACNGT	2 cut(s)	578, 1096
HpyCH4IV	ACGT	3 cut(s)	995, 1254, 1470
HpyCH4V	TGCA	6 cut(s)	457, 943, 955, 1525, 1660, 1891
HpyF10VI	GCNNNNNNNGC	5 cut(s)	413, 463, 1541, 1644, 1649
HpyF3I	CTNAG	7 cut(s)	192, 220, 467, 514, 605, 1362, 1648
HpySE526I	ACGT	3 cut(s)	995, 1254, 1470
Hsp92II	CATG	7 cut(s)	254, 375, 575, 761, 1282, 1664, 1744
HspAI	GCGC	4 cut(s)	405, 637, 850, 1493
KflI	GGGWCCC	1 cut(s)	1124
KpnI	GGTACC	1 cut(s)	1067
Ksp22I	TGATCA	1 cut(s)	754
Kzo9I	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
LmnI	GCTCC	6 cut(s)	139, 243, 538, 1300, 1376, 1549
Lsp1109I	GCAGC	5 cut(s)	674, 748, 967, 1163, 1509
LweI	GCATC	6 cut(s)	670, 924, 1088, 1148, 1630, 1878
MaeI	CTAG	2 cut(s)	632, 819
MaeII	ACGT	3 cut(s)	995, 1254, 1470
MaeIII	GTNAC	7 cut(s)	79, 228, 926, 1143, 1213, 1258, 1274
MalI	GATC	6 cut(s)	147, 434, 756, 1167, 1488, 1715
MbiI	CCGCTC	1 cut(s)	7
MboI	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
MflI	RGATCY	3 cut(s)	145, 432, 1486
MhlI	GDGCHC	1 cut(s)	1381
MluCI	AATT	6 cut(s)	264, 409, 547, 774, 1225, 1404
MlyI	GAGTC	3 cut(s)	47, 659, 1001
MmeI	TCCRAC	2 cut(s)	96, 238
Mph1103I	ATGCAT	1 cut(s)	1893
MseI	TTAA	6 cut(s)	671, 689, 737, 1014, 1233, 1473
MspA1I	CMGCKG	2 cut(s)	1154, 1749
MspI	CCGG	1 cut(s)	111
MspR9I	CCNGG	2 cut(s)	535, 767
Mva1269I	GAATGC	1 cut(s)	1297
MvaI	CCWGG	2 cut(s)	535, 767
MwoI	GCNNNNNNNGC	5 cut(s)	413, 463, 1541, 1644, 1649
NdeII	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
NlaIII	CATG	7 cut(s)	254, 375, 575, 761, 1282, 1664, 1744
NlaIV	GGNNCC	9 cut(s)	147, 474, 948, 1065, 1125, 1126, 1378, 1754, 1837
NmeAIII	GCCGAG	1 cut(s)	186
NmuCI	GTSAC	2 cut(s)	228, 1274
NsbI	TGCGCA	2 cut(s)	851, 1494
NsiI	ATGCAT	1 cut(s)	1893
NspI	RCATGY	3 cut(s)	375, 1282, 1744
NspV	TTCGAA	1 cut(s)	1454
PaeI	GCATGC	1 cut(s)	375
PceI	AGGCCT	1 cut(s)	444
PciI	ACATGT	1 cut(s)	1740
PcsI	WCGNNNNNNNCGW	1 cut(s)	158
PctI	GAATGC	1 cut(s)	1297
PflFI	GACNNNGTC	2 cut(s)	37, 221
PflMI	CCANNNNNTGG	3 cut(s)	209, 889, 1228
PkrI	GCNGC	7 cut(s)	6, 53, 664, 763, 957, 1153, 1524
PleI	GAGTC	3 cut(s)	46, 658, 1001
PpsI	GAGTC	3 cut(s)	46, 658, 1001
PpuMI	RGGWCCY	1 cut(s)	1124
PscI	ACATGT	1 cut(s)	1740
PshAI	GACNNNNGTC	1 cut(s)	1094
PsiI	TTATAA	1 cut(s)	1695
Psp5II	RGGWCCY	1 cut(s)	1124
Psp6I	CCWGG	2 cut(s)	533, 765
PspFI	CCCAGC	2 cut(s)	922, 1330
PspGI	CCWGG	2 cut(s)	533, 765
PspN4I	GGNNCC	9 cut(s)	147, 474, 948, 1065, 1125, 1126, 1378, 1754, 1837
PspPI	GGNCC	2 cut(s)	33, 1124
PspPPI	RGGWCCY	1 cut(s)	1124
PstI	CTGCAG	1 cut(s)	957
PstNI	CAGNNNCTG	1 cut(s)	48
PsuI	RGATCY	3 cut(s)	145, 432, 1486
PsyI	GACNNNGTC	2 cut(s)	37, 221
PvuII	CAGCTG	2 cut(s)	1154, 1749
RsaI	GTAC	5 cut(s)	610, 832, 1065, 1815, 1913
RsaNI	GTAC	5 cut(s)	609, 831, 1064, 1814, 1912
SaqAI	TTAA	6 cut(s)	671, 689, 737, 1014, 1233, 1473
SatI	GCNGC	7 cut(s)	5, 52, 663, 762, 956, 1152, 1523
Sau3AI	GATC	6 cut(s)	145, 432, 754, 1165, 1486, 1713
Sau96I	GGNCC	2 cut(s)	33, 1124
SchI	GAGTC	3 cut(s)	47, 659, 1001
ScrFI	CCNGG	2 cut(s)	535, 767
SduI	GDGCHC	1 cut(s)	1381
SfaNI	GCATC	6 cut(s)	670, 924, 1088, 1148, 1630, 1878
SfcI	CTRYAG	1 cut(s)	953
SfuI	TTCGAA	1 cut(s)	1454
SgrAI	CRCCGGYG	1 cut(s)	110
SinI	GGWCC	2 cut(s)	33, 1124
SphI	GCATGC	1 cut(s)	375
Sse9I	AATT	6 cut(s)	264, 409, 547, 774, 1225, 1404
SseBI	AGGCCT	1 cut(s)	444
SsiI	CCGC	3 cut(s)	5, 51, 114
SspMI	CTAG	2 cut(s)	632, 819
StuI	AGGCCT	1 cut(s)	444
StyD4I	CCNGG	2 cut(s)	533, 765
StyI	CCWWGG	1 cut(s)	1050
TaaI	ACNGT	2 cut(s)	578, 1096
TaiI	ACGT	3 cut(s)	998, 1257, 1473
TaqI	TCGA	4 cut(s)	918, 975, 1454, 1716
TaqII	GACCGA	1 cut(s)	50
TasI	AATT	6 cut(s)	264, 409, 547, 774, 1225, 1404
TatI	WGTACW	2 cut(s)	608, 1813
TauI	GCSGC	2 cut(s)	7, 54
Tru1I	TTAA	6 cut(s)	671, 689, 737, 1014, 1233, 1473
Tru9I	TTAA	6 cut(s)	671, 689, 737, 1014, 1233, 1473
TscAI	CASTG	2 cut(s)	483, 682
TseFI	GTSAC	2 cut(s)	228, 1274
TseI	GCWGC	5 cut(s)	662, 761, 955, 1151, 1522
Tsp45I	GTSAC	2 cut(s)	228, 1274
TspDTI	ATGAA	6 cut(s)	782, 1086, 1365, 1423, 1694, 1869
TspGWI	ACGGA	3 cut(s)	322, 1416, 1675
TspRI	CASTG	2 cut(s)	483, 682
Tth111I	GACNNNGTC	2 cut(s)	37, 221
Van91I	CCANNNNNTGG	3 cut(s)	209, 889, 1228
VpaK11BI	GGWCC	2 cut(s)	33, 1124
XapI	RAATTY	2 cut(s)	547, 1404
XceI	RCATGY	3 cut(s)	375, 1282, 1744
XmiI	GTMKAC	2 cut(s)	1424, 1630
XspI	CTAG	2 cut(s)	632, 819
Zsp2I	ATGCAT	1 cut(s)	1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.