Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0005879

Physical Location & Seq

Genomic Coordinates Reverse (-)

7859494 .. 7866979

Gene Structure 7486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1112100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGCCACTCGGGCAAAGAGCCGGCGACAAGAGCGAGTCTCGGTTCTGCGGCGTGGAGACCGAGTTCAACGATGACATGCCCCACGTCCTCGCTTTCAATCTCTCCCATGGCTCCTTCGACTTCGTCCTCGCTCCTTTGATGGATCCTGCTTACCGACCAAGCTTAATGCAAAAAGACAGTGGTGTTTCTGGTGTTCTTCCATTTTCCGGGTCAGACTTGGTTTTGAGTCCTTCCCAATGGAGCAGTCATGTCGTCGGAAAGGTTAGCTCATGGATTGACTTAGATTCAGAAGATGAGATCCTCCGGTGCGATTCAGAAACTACTTTGAAGCAAGAGATAGCATGGGCTTCTCATTTGTCCCTGCAGGCATGCCTTCTTCCAGCTCCAAAGGGGAAATCCTGTGCTAATTATGCTCGATGTGTAAATCAGCTTTTACAGGGCCTAAGCAGTACGCAGTTGTGGTTGCGGCTTCCATTGGTTAGGTCAGACAGTGAAACCATGGATGTGAACACTGATTCCTTGGATGATTCTTGGGAGATTTGGAATTCATTTCGTCTGCTATGTGAACATCATAGTCAGTTATCAGTTGCTCTTGATGTTTTAAGTTCACTACCTTCTGTAAACTCTCTTGGACGCTGGTTTGGGGAATCTGTTAGAGCAGCCATATTCAGTACTGATTGCTTTCTAACAAATGCCCGAGGCTATCCATGTCTGTCAAAGCGCCACCAGAATCTTGTTCATGGGCTTTTCAATCATTCTATGCAGATAGTTCTATCAGGAGAACCAGTGCATAGTCTTCCCAAGATAAATTCACATATAGCTGCCAATGATAATGATAATAATGTTGATGGTGTCCAGAAACATCCGTTGAGGCTGTATTTGGATTATGTTGGCTATCTCTACCAGAGGATGGATCCCCTTCCGGAGCAAGAACGGCTGGAGATTGGTTACAGGGATTACTTGCAGTCACCCTTACAGCCTCTCATGGATAATCTAGAAGCTCAAACCTATGAGACATTTGAGAAGGACACAATGAAATATATTCAGTACCAAAGAGCAATTTGTAGAGCTTTACAGGACAGGGTTCCAGATGATAAGGCATCTTCAGTAACTACCGTATTGATGGTTGTAGGAGCAGGACGTGGACCTCTTGTAAGGGCATCATTGCAGGCAGCTGAAGAAACTGGGCGCAAGCTTAAAGTCTACGCTGTTGAAAAAAATCCAAATGCAGTTGTTACACTTCATAGCTTGGTTAAACTGGAGGGGTGGGAAAACATTGTTTCCATAATTTCATGTGATATGCGTCACTGGGATGCTCCAGAGAAAGCTGACATTTTGGTTAGTGAATTGTTGGGTTCTTTTGGTGATAACGAGCTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGACTATTGAAGGATGATGGAATCTCGATACCTTCATCGTACACGAGTTTTATCCAACCAGTGACTGCTTCAAAGCTTTACAATGATGTTAAGTCGCACAAAGATATTGCACACTTCGAAACTGCTTATGTTGTTAAATTGCACAACATTGCAAGACTTGCTCCTCCTCAACCTGTGTTCACGTTTGATCATCCAAATCGCTCAACTGACAAAAGCAATAACCAGCACACGAAGTTGCAGTTTGGAATAACAAGTGATACTGGCTCAGCCATGATTCATGGATTTGCTGGCTATTTTGATGCAACACTATACAAAGAAGTTCATCTTGGCATTGAACCATCAACATCAACACCAAACATGTTTAGCTGGTTCCCAATATTTTTCCCACTAAGGATACCAATTACGCTTAGTCCTGGCGCTTCTCTTGACGTACATTTTTGGCGGTGTTGTTGTCCTACCAAGGTTTGGTACGAATGGTGCGTGGCATCGCCCTCCACTTCGCCAATTCACAACAGCAACGGACGTTCATACTGGGTTGGGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009909 GO:0009987 GO:0010219 GO:0010220 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019918 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043985 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048580 GO:0048583 GO:0048584 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0140096 GO:1901564 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 ko04011 ko04111 map03013 map04011 map04111

Pfam Domains

Protein Families

PRMT5 PRMT5_C PRMT5_TIM

Protein Analysis

650

Amino Acids

72.56

Weight (kDa)

5.62

Isoelectric Point (pI)

45.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRMT5_TIM	PF17285	39 - 303	3.7e-79	PRMT5 TIM barrel domain
PRMT5	PF05185	310 - 478	4.4e-72	PRMT5 arginine-N-methyltransferase
TRM5-TYW2_MTfase	PF02475	376 - 453	2.3e-06	TRM5/TYW2 methyltransferase domain
PRMT5_C	PF17286	481 - 647	8.7e-62	PRMT5 oligomerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31120 AT4G31120
fragaria_vesca	FvH4_2g30610 FvH4_2g30610 FvH4_2g30610 FvH4_2g30610 FvH4_2g30610
malus_domestica	MD08G1132700.v1.1 MD15G1111800.v1.1 MD15G1112100.v1.1 MD15G1112600.v1.1 MD15G1112700.v1.1
prunus_persica	Prupe.1G463300_v2.0.a1 Prupe.1G463300_v2.0.a1
pyrus_communis	pycom08g11190 pycom15g10130
rosa_chinensis	RchiOBHm_Chr6g0312391
rosa_laevigata	RLG00000010331
rosa_multiflora	Rmu_sc0028838.1_g000001 Rmu_sc0031621.1_g000001 Rmu_ssc0000424.1_g000022
rosa_roxburghii	Rroxscaffold_7G00156840
rosa_rugosa	Rorug06G0395500
rosa_samantha	Rh6AG512700 Rh6BG523600 Rh6CG529000 Rh6DG514900
rosa_wichuraiana	Rw6G044560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	910, 1869
AccI	GTMKAC	1 cut(s)	1203
AccIII	TCCGGA	1 cut(s)	922
AciI	CCGC	3 cut(s)	48, 466, 1846
AclWI	GGATC	5 cut(s)	137, 150, 292, 908, 921
AcsI	RAATTY	2 cut(s)	544, 808
AcuI	CTGAAG	2 cut(s)	1089, 1197
AfaI	GTAC	6 cut(s)	451, 673, 1049, 1445, 1836, 1874
AfiI	CCNNNNNNNGG	3 cut(s)	206, 910, 1869
AflIII	ACRYGT	1 cut(s)	1761
AgsI	TTSAA	8 cut(s)	67, 97, 328, 751, 1214, 1414, 1476, 1739
AjiI	CACGTC	2 cut(s)	85, 1142
AjnI	CCWGG	1 cut(s)	1816
AjuI	GAANNNNNNNTTGG	2 cut(s)	1713, 1745
AloI	GAACNNNNNNTCC	4 cut(s)	47, 79, 500, 532
Alw26I	GTCTC	5 cut(s)	42, 50, 1007, 1383, 1399
AlwI	GGATC	5 cut(s)	137, 150, 292, 908, 921
AlwNI	CAGNNNCTG	1 cut(s)	1469
Ama87I	CYCGRG	2 cut(s)	8, 696
Aor13HI	TCCGGA	1 cut(s)	922
AoxI	GGCC	1 cut(s)	439
ApeKI	GCWGC	3 cut(s)	659, 821, 1172
ApoI	RAATTY	2 cut(s)	544, 808
AspLEI	GCGC	3 cut(s)	723, 1191, 1823
AspS9I	GGNCC	2 cut(s)	439, 1145
AsuC2I	CCSGG	1 cut(s)	208
AsuHPI	GGTGA	2 cut(s)	960, 1376
AsuII	TTCGAA	1 cut(s)	1521
AvaI	CYCGRG	2 cut(s)	8, 696
AvaII	GGWCC	1 cut(s)	1145
BamHI	GGATCC	2 cut(s)	142, 913
BanII	GRGCYC	2 cut(s)	1402, 1947
BauI	CACGAG	1 cut(s)	1447
BbsI	GAAGAC	1 cut(s)	788
BbvI	GCAGC	3 cut(s)	671, 808, 1184
BccI	CCATC	7 cut(s)	133, 842, 904, 1117, 1388, 1415, 1750
BceAI	ACGGC	1 cut(s)	950
BcgI	CGANNNNNNTGC	2 cut(s)	232, 266
BciT130I	CCWGG	1 cut(s)	1818
BciVI	GTATCC	1 cut(s)	1791
BclI	TGATCA	1 cut(s)	1591
BcnI	CCSGG	1 cut(s)	208
BcoDI	GTCTC	5 cut(s)	42, 50, 1007, 1383, 1399
BfaI	CTAG	2 cut(s)	995, 1948
BfmI	CTRYAG	1 cut(s)	362
BfoI	RGCGCY	2 cut(s)	724, 1824
BfuI	GTATCC	1 cut(s)	1791
BglI	GCCNNNNNGGC	1 cut(s)	10
BisI	GCNGC	5 cut(s)	49, 467, 660, 822, 1173
BlpI	GCTNAGC	1 cut(s)	1669
BlsI	GCNGC	5 cut(s)	50, 468, 661, 823, 1174
BmcAI	AGTACT	1 cut(s)	673
Bme1390I	CCNGG	2 cut(s)	208, 1818
Bme18I	GGWCC	1 cut(s)	1145
BmeT110I	CYCGRG	2 cut(s)	8, 696
BmgBI	CACGTC	2 cut(s)	85, 1142
BmgT120I	GGNCC	2 cut(s)	439, 1145
BmiI	GGNNCC	6 cut(s)	112, 144, 915, 1086, 1399, 1775
BmrFI	CCNGG	2 cut(s)	208, 1818
BmrI	ACTGGG	3 cut(s)	1194, 1318, 1945
BmsI	GCATC	5 cut(s)	1109, 1169, 1303, 1693, 1898
BmuI	ACTGGG	3 cut(s)	1194, 1318, 1945
BpiI	GAAGAC	1 cut(s)	788
BplI	GAGNNNNNCTC	2 cut(s)	22, 54
BpmI	CTGGAG	3 cut(s)	959, 1280, 1302
Bpu10I	CCTNAGC	1 cut(s)	443
Bpu1102I	GCTNAGC	1 cut(s)	1669
Bpu14I	TTCGAA	1 cut(s)	1521
BpuMI	CCSGG	1 cut(s)	208
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	5 cut(s)	106, 498, 519, 697, 1863
BsaWI	WCCGGW	2 cut(s)	303, 922
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 771, 801
Bsc4I	CCNNNNNNNGG	3 cut(s)	206, 910, 1869
Bse118I	RCCGGY	1 cut(s)	20
Bse1I	ACTGG	7 cut(s)	785, 1189, 1263, 1313, 1463, 1669, 1940
Bse3DI	GCAATG	2 cut(s)	1163, 1551
BseAI	TCCGGA	1 cut(s)	922
BseBI	CCWGG	1 cut(s)	1818
BseDI	CCNNGG	5 cut(s)	106, 498, 519, 697, 1863
BseGI	GGATG	7 cut(s)	508, 529, 862, 915, 1318, 1423, 1594
BseLI	CCNNNNNNNGG	3 cut(s)	206, 910, 1869
BseMI	GCAATG	2 cut(s)	1163, 1551
BseMII	CTCAG	2 cut(s)	1374, 1683
BseNI	ACTGG	7 cut(s)	785, 1189, 1263, 1313, 1463, 1669, 1940
BseRI	GAGGAG	2 cut(s)	1557, 1560
BseXI	GCAGC	3 cut(s)	671, 808, 1184
BshFI	GGCC	1 cut(s)	441
BsiHKCI	CYCGRG	2 cut(s)	8, 696
BsiSI	CCGG	4 cut(s)	21, 207, 304, 923
BslFI	GGGAC	1 cut(s)	343
BslI	CCNNNNNNNGG	3 cut(s)	206, 910, 1869
BsmAI	GTCTC	5 cut(s)	42, 50, 1007, 1383, 1399
BsmFI	GGGAC	1 cut(s)	343
BsnI	GGCC	1 cut(s)	441
Bso31I	GGTCTC	1 cut(s)	50
BsoBI	CYCGRG	2 cut(s)	8, 696
Bsp119I	TTCGAA	1 cut(s)	1521
Bsp1286I	GDGCHC	2 cut(s)	1402, 1947
Bsp13I	TCCGGA	1 cut(s)	922
Bsp143I	GATC	4 cut(s)	142, 297, 913, 1591
Bsp1720I	GCTNAGC	1 cut(s)	1669
Bsp19I	CCATGG	2 cut(s)	106, 498
BspACI	CCGC	3 cut(s)	48, 466, 1846
BspANI	GGCC	1 cut(s)	441
BspCNI	CTCAG	2 cut(s)	1375, 1682
BspEI	TCCGGA	1 cut(s)	922
BspLI	GGNNCC	6 cut(s)	112, 144, 915, 1086, 1399, 1775
BspMAI	CTGCAG	1 cut(s)	366
BspPI	GGATC	5 cut(s)	137, 150, 292, 908, 921
BspT104I	TTCGAA	1 cut(s)	1521
BspTNI	GGTCTC	1 cut(s)	50
BsrDI	GCAATG	2 cut(s)	1163, 1551
BsrFI	RCCGGY	1 cut(s)	20
BsrI	ACTGG	7 cut(s)	785, 1189, 1263, 1313, 1463, 1669, 1940
BssAI	RCCGGY	1 cut(s)	20
BssECI	CCNNGG	5 cut(s)	106, 498, 519, 697, 1863
BssMI	GATC	4 cut(s)	142, 297, 913, 1591
BssSI	CACGAG	1 cut(s)	1447
BssT1I	CCWWGG	4 cut(s)	106, 498, 519, 1863
Bst2BI	CACGAG	1 cut(s)	1447
Bst2UI	CCWGG	1 cut(s)	1818
Bst4CI	ACNGT	3 cut(s)	179, 491, 1117
BstAPI	GCANNNNNTGC	1 cut(s)	1562
BstBI	TTCGAA	1 cut(s)	1521
BstC8I	GCNNGC	6 cut(s)	22, 366, 370, 1170, 1193, 1693
BstDEI	CTNAG	6 cut(s)	280, 443, 1383, 1669, 1793, 1811
BstDSI	CCRYGG	2 cut(s)	106, 498
BstF5I	GGATG	7 cut(s)	508, 529, 862, 915, 1318, 1423, 1594
BstH2I	RGCGCY	2 cut(s)	724, 1824
BstHHI	GCGC	3 cut(s)	723, 1191, 1823
BstKTI	GATC	4 cut(s)	145, 300, 916, 1594
BstMAI	GTCTC	5 cut(s)	42, 50, 1007, 1383, 1399
BstMBI	GATC	4 cut(s)	142, 297, 913, 1591
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 30, 410, 934, 1562
BstNI	CCWGG	1 cut(s)	1818
BstNSI	RCATGY	3 cut(s)	79, 372, 1765
BstSCI	CCNGG	2 cut(s)	206, 1816
BstSFI	CTRYAG	1 cut(s)	362
BstV1I	GCAGC	3 cut(s)	671, 808, 1184
BstV2I	GAAGAC	1 cut(s)	788
BstX2I	RGATCY	3 cut(s)	142, 297, 913
BstYI	RGATCY	3 cut(s)	142, 297, 913
BsuI	GTATCC	1 cut(s)	1791
BsuRI	GGCC	1 cut(s)	441
BtgI	CCRYGG	2 cut(s)	106, 498
BtgZI	GCGATG	1 cut(s)	1875
BtrI	CACGTC	2 cut(s)	85, 1142
BtsCI	GGATG	7 cut(s)	508, 529, 862, 915, 1318, 1423, 1594
BtsIMutI	CAGTG	6 cut(s)	184, 496, 510, 792, 1306, 1470
Cac8I	GCNNGC	6 cut(s)	22, 366, 370, 1170, 1193, 1693
CaiI	CAGNNNCTG	1 cut(s)	1469
CfoI	GCGC	3 cut(s)	723, 1191, 1823
Cfr10I	RCCGGY	1 cut(s)	20
Cfr13I	GGNCC	2 cut(s)	439, 1145
CseI	GACGC	2 cut(s)	642, 1292
Csp6I	GTAC	6 cut(s)	450, 672, 1048, 1444, 1835, 1873
CviQI	GTAC	6 cut(s)	450, 672, 1048, 1444, 1835, 1873
DdeI	CTNAG	6 cut(s)	280, 443, 1383, 1669, 1793, 1811
DpnI	GATC	4 cut(s)	144, 299, 915, 1593
DpnII	GATC	4 cut(s)	142, 297, 913, 1591
Eco130I	CCWWGG	4 cut(s)	106, 498, 519, 1863
Eco24I	GRGCYC	2 cut(s)	1402, 1947
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	1 cut(s)	1145
Eco57I	CTGAAG	2 cut(s)	1089, 1197
Eco88I	CYCGRG	2 cut(s)	8, 696
EcoO109I	RGGNCCY	1 cut(s)	439
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	1 cut(s)	1816
EcoT14I	CCWWGG	4 cut(s)	106, 498, 519, 1863
EcoT38I	GRGCYC	2 cut(s)	1402, 1947
ErhI	CCWWGG	4 cut(s)	106, 498, 519, 1863
FalI	AAGNNNNNCTT	2 cut(s)	1713, 1745
FaqI	GGGAC	1 cut(s)	343
FbaI	TGATCA	1 cut(s)	1591
FblI	GTMKAC	1 cut(s)	1203
Fnu4HI	GCNGC	5 cut(s)	49, 467, 660, 822, 1173
FokI	GGATG	7 cut(s)	515, 536, 849, 922, 1325, 1430, 1581
FriOI	GRGCYC	2 cut(s)	1402, 1947
Fsp4HI	GCNGC	5 cut(s)	49, 467, 660, 822, 1173
FspBI	CTAG	2 cut(s)	995, 1948
GlaI	GCGC	3 cut(s)	722, 1190, 1822
GluI	GCNGC	5 cut(s)	49, 467, 660, 822, 1173
GsuI	CTGGAG	3 cut(s)	959, 1280, 1302
HaeII	RGCGCY	2 cut(s)	724, 1824
HaeIII	GGCC	1 cut(s)	441
HapII	CCGG	4 cut(s)	21, 207, 304, 923
HgaI	GACGC	2 cut(s)	642, 1292
HhaI	GCGC	3 cut(s)	723, 1191, 1823
Hin6I	GCGC	3 cut(s)	721, 1189, 1821
HinP1I	GCGC	3 cut(s)	721, 1189, 1821
HindIII	AAGCTT	3 cut(s)	160, 1193, 1478
HpaII	CCGG	4 cut(s)	21, 207, 304, 923
HphI	GGTGA	2 cut(s)	960, 1376
Hpy166II	GTNNAC	8 cut(s)	508, 566, 608, 622, 1145, 1204, 1446, 1584
Hpy188I	TCNGA	5 cut(s)	214, 257, 289, 316, 487
Hpy8I	GTNNAC	8 cut(s)	508, 566, 608, 622, 1145, 1204, 1446, 1584
Hpy99I	CGWCG	1 cut(s)	257
HpyAV	CCTTC	8 cut(s)	124, 240, 383, 624, 929, 1018, 1408, 1446
HpyCH4III	ACNGT	3 cut(s)	179, 491, 1117
HpyCH4IV	ACGT	5 cut(s)	84, 1141, 1586, 1833, 1927
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 30, 410, 934, 1562
HpyF3I	CTNAG	6 cut(s)	280, 443, 1383, 1669, 1793, 1811
HpySE526I	ACGT	5 cut(s)	84, 1141, 1586, 1833, 1927
HspAI	GCGC	3 cut(s)	721, 1189, 1821
Kpn2I	TCCGGA	1 cut(s)	922
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Ksp22I	TGATCA	1 cut(s)	1591
Kzo9I	GATC	4 cut(s)	142, 297, 913, 1591
LmnI	GCTCC	9 cut(s)	116, 136, 240, 388, 925, 1133, 1321, 1397, 1570
Lsp1109I	GCAGC	3 cut(s)	671, 808, 1184
LweI	GCATC	5 cut(s)	1109, 1169, 1303, 1693, 1898
MaeI	CTAG	2 cut(s)	995, 1948
MaeII	ACGT	5 cut(s)	84, 1141, 1586, 1833, 1927
MaeIII	GTNAC	6 cut(s)	947, 966, 1108, 1234, 1304, 1465
MalI	GATC	4 cut(s)	144, 299, 915, 1593
MboI	GATC	4 cut(s)	142, 297, 913, 1591
MboII	GAAGA	6 cut(s)	188, 302, 368, 788, 1095, 1190
MflI	RGATCY	3 cut(s)	142, 297, 913
MhlI	GDGCHC	2 cut(s)	1402, 1947
MluCI	AATT	9 cut(s)	406, 544, 808, 1059, 1287, 1346, 1541, 1803, 1908
MlyI	GAGTC	2 cut(s)	44, 235
MmeI	TCCRAC	2 cut(s)	235, 1483
MroI	TCCGGA	1 cut(s)	922
MroNI	GCCGGC	1 cut(s)	20
MseI	TTAA	6 cut(s)	164, 602, 1197, 1254, 1494, 1539
MslI	CAYNNNNRTG	2 cut(s)	503, 1311
MspA1I	CMGCKG	1 cut(s)	1175
MspI	CCGG	4 cut(s)	21, 207, 304, 923
MspR9I	CCNGG	2 cut(s)	208, 1818
MvaI	CCWGG	1 cut(s)	1818
MwoI	GCNNNNNNNGC	5 cut(s)	10, 30, 410, 934, 1562
NaeI	GCCGGC	1 cut(s)	22
NciI	CCSGG	1 cut(s)	208
NcoI	CCATGG	2 cut(s)	106, 498
NdeII	GATC	4 cut(s)	142, 297, 913, 1591
NgoMIV	GCCGGC	1 cut(s)	20
NlaIV	GGNNCC	6 cut(s)	112, 144, 915, 1086, 1399, 1775
NmuCI	GTSAC	3 cut(s)	966, 1304, 1465
NspI	RCATGY	3 cut(s)	79, 372, 1765
NspV	TTCGAA	1 cut(s)	1521
PaeI	GCATGC	1 cut(s)	372
PciI	ACATGT	1 cut(s)	1761
PcsI	WCGNNNNNNNCGW	1 cut(s)	1881
PdiI	GCCGGC	1 cut(s)	22
PfeI	GAWTC	8 cut(s)	284, 311, 515, 527, 647, 730, 1425, 1678
PflFI	GACNNNGTC	1 cut(s)	122
PflMI	CCANNNNNTGG	2 cut(s)	910, 1869
PkrI	GCNGC	5 cut(s)	50, 468, 661, 823, 1174
PleI	GAGTC	2 cut(s)	43, 234
PpsI	GAGTC	2 cut(s)	43, 234
PscI	ACATGT	1 cut(s)	1761
Psp6I	CCWGG	1 cut(s)	1816
PspGI	CCWGG	1 cut(s)	1816
PspN4I	GGNNCC	6 cut(s)	112, 144, 915, 1086, 1399, 1775
PspPI	GGNCC	2 cut(s)	439, 1145
PstI	CTGCAG	1 cut(s)	366
PstNI	CAGNNNCTG	1 cut(s)	1469
PsuI	RGATCY	3 cut(s)	142, 297, 913
PsyI	GACNNNGTC	1 cut(s)	122
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	6 cut(s)	451, 673, 1049, 1445, 1836, 1874
RsaNI	GTAC	6 cut(s)	450, 672, 1048, 1444, 1835, 1873
RseI	CAYNNNNRTG	2 cut(s)	503, 1311
SaqAI	TTAA	6 cut(s)	164, 602, 1197, 1254, 1494, 1539
SatI	GCNGC	5 cut(s)	49, 467, 660, 822, 1173
Sau3AI	GATC	4 cut(s)	142, 297, 913, 1591
Sau96I	GGNCC	2 cut(s)	439, 1145
SbfI	CCTGCAGG	1 cut(s)	366
ScaI	AGTACT	1 cut(s)	673
SchI	GAGTC	2 cut(s)	44, 235
ScrFI	CCNGG	2 cut(s)	208, 1818
SdaI	CCTGCAGG	1 cut(s)	366
SduI	GDGCHC	2 cut(s)	1402, 1947
SfaNI	GCATC	5 cut(s)	1109, 1169, 1303, 1693, 1898
SfcI	CTRYAG	1 cut(s)	362
SfuI	TTCGAA	1 cut(s)	1521
SinI	GGWCC	1 cut(s)	1145
SmiMI	CAYNNNNRTG	2 cut(s)	503, 1311
SphI	GCATGC	1 cut(s)	372
Sse8387I	CCTGCAGG	1 cut(s)	366
Sse9I	AATT	9 cut(s)	406, 544, 808, 1059, 1287, 1346, 1541, 1803, 1908
SsiI	CCGC	3 cut(s)	48, 466, 1846
SspI	AATATT	1 cut(s)	1782
SspMI	CTAG	2 cut(s)	995, 1948
StyD4I	CCNGG	2 cut(s)	206, 1816
StyI	CCWWGG	4 cut(s)	106, 498, 519, 1863
TaaI	ACNGT	3 cut(s)	179, 491, 1117
TaiI	ACGT	5 cut(s)	87, 1144, 1589, 1836, 1930
TaqI	TCGA	4 cut(s)	117, 415, 1430, 1521
TaqII	GACCGA	1 cut(s)	74
TasI	AATT	9 cut(s)	406, 544, 808, 1059, 1287, 1346, 1541, 1803, 1908
TatI	WGTACW	1 cut(s)	671
TauI	GCSGC	2 cut(s)	51, 469
TfiI	GAWTC	8 cut(s)	284, 311, 515, 527, 647, 730, 1425, 1678
Tru1I	TTAA	6 cut(s)	164, 602, 1197, 1254, 1494, 1539
Tru9I	TTAA	6 cut(s)	164, 602, 1197, 1254, 1494, 1539
TscAI	CASTG	6 cut(s)	184, 496, 517, 792, 1313, 1470
TseFI	GTSAC	3 cut(s)	966, 1304, 1465
TseI	GCWGC	3 cut(s)	659, 821, 1172
Tsp45I	GTSAC	3 cut(s)	966, 1304, 1465
TspDTI	ATGAA	9 cut(s)	537, 728, 1049, 1232, 1281, 1428, 1670, 1715, 1920
TspGWI	ACGGA	2 cut(s)	855, 1938
TspRI	CASTG	6 cut(s)	184, 496, 517, 792, 1313, 1470
Tth111I	GACNNNGTC	1 cut(s)	122
Van91I	CCANNNNNTGG	2 cut(s)	910, 1869
VpaK11BI	GGWCC	1 cut(s)	1145
XapI	RAATTY	2 cut(s)	544, 808
XbaI	TCTAGA	1 cut(s)	994
XceI	RCATGY	3 cut(s)	79, 372, 1765
XmiI	GTMKAC	1 cut(s)	1203
XspI	CTAG	2 cut(s)	995, 1948
ZrmI	AGTACT	1 cut(s)	673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.