AT4G36650

Transcription factor TFIIB repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0016176
Physical Location & Seq
Reverse (-)
17283033 .. 17285656
2624 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G36650.2

Sequence Viewer

Length: 1512 bp
ATGAAGTGTCCGTACTGTTCATCGGCGCAGGGACGGTGTACCACCACGAGCTCCGGTAGATCAATAACGGAGTGCTCATCTTGCGGTCGCGTAATGGAAGAACGACAGACGCAAAACCACCACCTCTTCCATCTCCGAGCCCAAGACACTCCTCTCTGCTTAGTCACTTCCGATCTCCAAACGGCGGCGCAACCGTCTCCTGAAGACGAGGAAGATCCGTTCGAACCTACCGGATTCATTACCGCCTTCTCTACCTGGTCCCTCGAGCCAAGCCCGATTTTCGCTCGCTCTTCCCTCTCTTTCTCCGGTCATCTCGCTGAACTCGAACGAACCCTAGAACTCGCTTCGTCAACATCGAATTCGAATTCGTCGACTGTTGTGGTGGATAATCTTAGGGCTTATATGCAGATTATCGATGTGGCATCGATTTTAGGATTGGATTGCGATATCTCTGAGCATGCTTTCCAGTTGTTTAGGGATTGTTGCTCAGCTACTTGCTTGCGAAACAGAAGCGTTGAAGCTTTAGCCACTGCTTGCCTTGTTCAAGCTATTAGGGAGGCTCAAGAACCTAGAACTCTTCAGGAAATCTCCATTGCAGCCAATGTACAGCAGAAGGAAATTGGGAAGTACATCAAGATTTTAGGAGAAGCTCTACAACTAAGTCAACCCATCAACAGTAACTCTATATCAGTTCATATGCCAAGATTCTGTACCCTCCTTCAACTAAACAAATCTGCTCAGGAACTAGCAACACACATTGGAGAAGTTGTGATCAACAAATGCTTCTGCACCCGTAGAAACCCGATCAGCATTTCTGCAGCTGCTATCTATCTGGCATGTCAACTTGAAGACAAGCGAAAGACACAAGCAGAGATATGTAAAATAACCGGACTAACTGAGGTAACTCTACGCAAAGTCTATAAAGAACTGCTAGAGAATTGGGACGATCTACTTCCATCTAACTACACACCAGCTGTGCCACCAGAGAAAGCATTTCCCACAACCACAATCTCCACAACCCGCTCAACAACTCCTAGAGCCGTGGATCCACCTGAACCTAGTTTCGTGGAAAAAGACAAGCCCTCTGCGAAACCAATCGAAACTTTCGATCATACCTACCAACAACCGAAAGGCAAAGAAGATAAGCAGCCAAAATTCAGACAGCCTTGGCTGTTTGGAACTGCCAGTGTCATGAACCCAGCGGAGATGATAAGCGAGCCAGCAAAACCTAATGCTATGGACTATGAAAAGCAACAACTCGATAAGCAGCAGCAGCAGCAGCTAGGCGATAAGGAAACATTGCCTATATATCTAAGAGACCATAACCCATTCCCTTCAAATCCATCTCCATCTACAGGTATCAGCACAATCAATTGGTCATTCCGACCATCTGTTGTCCCCGGATCTTCCAGCAACTTGCCTGTTATTCATCCCCCAAAACTACCTCCGGGTTATGCTGAGATTAGAGGTAGTGGAAGCAGGAATGCTGATAATCCCCATGGAGACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0000976 GO:0000977 GO:0000979 GO:0000988 GO:0000990 GO:0000991 GO:0000993 GO:0001012 GO:0001046 GO:0001047 GO:0001067 GO:0001098 GO:0001099 GO:0001139 GO:0001173 GO:0001174 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009526 GO:0009527 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019867 GO:0019899 GO:0022607 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031967 GO:0031968 GO:0031975 GO:0032774 GO:0032991 GO:0032993 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0042170 GO:0043167 GO:0043169 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043565 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060260 GO:0060261 GO:0065003 GO:0065004 GO:0065007 GO:0070063 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0098588 GO:0098805 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990114 GO:1990837 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05169 ko05203 map03022 map05169 map05203
Pfam Domains
Protein Families
TFIIB

Protein Analysis

503

Amino Acids

55.67

Weight (kDa)

5.84

Isoelectric Point (pI)

60.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIIB PF00382 133 - 214 1.1e-10 Transcription factor TFIIB repeat
TFIIB PF00382 231 - 300 3.8e-12 Transcription factor TFIIB repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36650
fragaria_vesca FvH4_1g13530
malus_domestica MD15G1265100.v1.1
prunus_persica Prupe.7G152500_v2.0.a1
pyrus_communis pycom15g23090
rosa_chinensis RchiOBHm_Chr2g0101921
rosa_laevigata RLG00000017116
rosa_multiflora Rmu_sc0010781.1_g000003
rosa_roxburghii Rroxscaffold_2G00140950
rosa_rugosa Rorug02G0103100
rosa_samantha Rh2AG151100 Rh2BG156600 Rh2CG156400 Rh2DG156700
rosa_wichuraiana Rw2G011790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1023
AccI GTMKAC 1 cut(s) 371
AccII CGCG 1 cut(s) 90
AciI CCGC 5 cut(s) 84, 185, 243, 1021, 1202
AclWI GGATC 4 cut(s) 209, 1040, 1053, 1411
AcsI RAATTY 3 cut(s) 358, 364, 1154
AcuI CTGAAG 2 cut(s) 222, 563
AfaI GTAC 5 cut(s) 14, 40, 606, 629, 712
AfiI CCNNNNNNNGG 2 cut(s) 184, 1355
AgsI TTSAA 5 cut(s) 518, 545, 722, 848, 1338
AjnI CCWGG 1 cut(s) 254
AloI GAACNNNNNNTCC 2 cut(s) 203, 235
AluBI AGCT 8 cut(s) 51, 491, 521, 548, 650, 821, 974, 1282
AluI AGCT 8 cut(s) 51, 491, 521, 548, 650, 821, 974, 1282
Alw21I GWGCWC 2 cut(s) 53, 77
Alw26I GTCTC 3 cut(s) 201, 1311, 1497
AlwI GGATC 4 cut(s) 209, 1040, 1053, 1411
Ama87I CYCGRG 1 cut(s) 263
ApeKI GCWGC 9 cut(s) 596, 818, 821, 1147, 1267, 1270, 1273, 1276, 1279
ApoI RAATTY 3 cut(s) 358, 364, 1154
AspLEI GCGC 2 cut(s) 28, 190
AspS9I GGNCC 1 cut(s) 258
AsuC2I CCSGG 2 cut(s) 1401, 1449
AsuII TTCGAA 2 cut(s) 222, 362
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 1 cut(s) 258
BamHI GGATCC 1 cut(s) 1045
BanII GRGCYC 2 cut(s) 53, 142
BarI GAAGNNNNNNTAC 1 cut(s) 28
BauI CACGAG 1 cut(s) 46
BbsI GAAGAC 2 cut(s) 210, 855
Bbv12I GWGCWC 2 cut(s) 53, 77
BbvI GCAGC 9 cut(s) 608, 808, 830, 1159, 1279, 1282, 1285, 1288, 1291
BccI CCATC 6 cut(s) 138, 677, 964, 1351, 1357, 1396
BceAI ACGGC 2 cut(s) 198, 1025
BciT130I CCWGG 1 cut(s) 256
BclI TGATCA 1 cut(s) 771
BcnI CCSGG 2 cut(s) 1401, 1449
BcoDI GTCTC 3 cut(s) 201, 1311, 1497
BfaI CTAG 8 cut(s) 335, 570, 746, 932, 1035, 1059, 1283, 1510
BfmI CTRYAG 2 cut(s) 816, 1353
BlpI GCTNAGC 1 cut(s) 487
Bme1390I CCNGG 3 cut(s) 256, 1401, 1449
Bme18I GGWCC 1 cut(s) 258
BmeT110I CYCGRG 1 cut(s) 263
BmgT120I GGNCC 1 cut(s) 258
BmiI GGNNCC 2 cut(s) 260, 1047
BmrFI CCNGG 3 cut(s) 256, 1401, 1449
BmsI GCATC 1 cut(s) 431
BpiI GAAGAC 2 cut(s) 210, 855
Bpu10I CCTNAGC 1 cut(s) 738
Bpu1102I GCTNAGC 1 cut(s) 487
Bpu14I TTCGAA 2 cut(s) 222, 362
BpuEI CTTGAG 1 cut(s) 546
BpuMI CCSGG 2 cut(s) 1401, 1449
Bsa29I ATCGAT 2 cut(s) 414, 425
BsaI GGTCTC 1 cut(s) 1311
BsaJI CCNNGG 4 cut(s) 1041, 1166, 1399, 1498
BsaWI WCCGGW 4 cut(s) 53, 230, 305, 887
BsaXI ACNNNNNCTCC 2 cut(s) 753, 783
Bsc4I CCNNNNNNNGG 2 cut(s) 184, 1355
Bse1I ACTGG 2 cut(s) 466, 1185
Bse3DI GCAATG 2 cut(s) 591, 1298
BseBI CCWGG 1 cut(s) 256
BseCI ATCGAT 2 cut(s) 414, 425
BseDI CCNNGG 4 cut(s) 1041, 1166, 1399, 1498
BseGI GGATG 1 cut(s) 1429
BseLI CCNNNNNNNGG 2 cut(s) 184, 1355
BseMI GCAATG 2 cut(s) 591, 1298
BseMII CTCAG 5 cut(s) 444, 501, 752, 888, 1449
BseNI ACTGG 2 cut(s) 466, 1185
BseRI GAGGAG 1 cut(s) 141
BseXI GCAGC 9 cut(s) 608, 808, 830, 1159, 1279, 1282, 1285, 1288, 1291
BseYI CCCAGC 1 cut(s) 1198
BsgI GTGCAG 1 cut(s) 772
Bsh1236I CGCG 1 cut(s) 90
Bsh1285I CGRYCG 1 cut(s) 88
BshVI ATCGAT 2 cut(s) 414, 425
BsiEI CGRYCG 1 cut(s) 88
BsiHKAI GWGCWC 2 cut(s) 53, 77
BsiHKCI CYCGRG 1 cut(s) 263
BsiSI CCGG 6 cut(s) 54, 231, 306, 888, 1401, 1448
BslFI GGGAC 4 cut(s) 45, 244, 956, 1382
BslI CCNNNNNNNGG 2 cut(s) 184, 1355
BsmAI GTCTC 3 cut(s) 201, 1311, 1497
BsmBI CGTCTC 1 cut(s) 201
BsmFI GGGAC 4 cut(s) 45, 244, 956, 1382
BsmI GAATGC 1 cut(s) 1489
Bso31I GGTCTC 1 cut(s) 1311
BsoBI CYCGRG 1 cut(s) 263
Bsp119I TTCGAA 2 cut(s) 222, 362
Bsp1286I GDGCHC 3 cut(s) 53, 77, 142
Bsp1407I TGTACA 1 cut(s) 604
Bsp143I GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
Bsp1720I GCTNAGC 1 cut(s) 487
Bsp19I CCATGG 1 cut(s) 1498
BspACI CCGC 5 cut(s) 84, 185, 243, 1021, 1202
BspCNI CTCAG 5 cut(s) 445, 500, 751, 889, 1450
BspDI ATCGAT 2 cut(s) 414, 425
BspFNI CGCG 1 cut(s) 90
BspHI TCATGA 1 cut(s) 1191
BspLI GGNNCC 2 cut(s) 260, 1047
BspMAI CTGCAG 1 cut(s) 820
BspPI GGATC 4 cut(s) 209, 1040, 1053, 1411
BspQI GCTCTTC 1 cut(s) 295
BspT104I TTCGAA 2 cut(s) 222, 362
BspTNI GGTCTC 1 cut(s) 1311
BsrBI CCGCTC 1 cut(s) 1023
BsrDI GCAATG 2 cut(s) 591, 1298
BsrGI TGTACA 1 cut(s) 604
BsrI ACTGG 2 cut(s) 466, 1185
BssECI CCNNGG 4 cut(s) 1041, 1166, 1399, 1498
BssMI GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
BssSI CACGAG 1 cut(s) 46
BssT1I CCWWGG 2 cut(s) 1166, 1498
Bst2BI CACGAG 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 256
Bst4CI ACNGT 5 cut(s) 17, 36, 195, 376, 677
Bst6I CTCTTC 3 cut(s) 131, 295, 582
BstAUI TGTACA 1 cut(s) 604
BstBI TTCGAA 2 cut(s) 222, 362
BstC8I GCNNGC 6 cut(s) 286, 459, 500, 535, 1217, 1221
BstDEI CTNAG 9 cut(s) 160, 392, 453, 487, 659, 738, 897, 1313, 1458
BstDSI CCRYGG 2 cut(s) 1041, 1498
BstF5I GGATG 1 cut(s) 1429
BstFNI CGCG 1 cut(s) 90
BstHHI GCGC 2 cut(s) 28, 190
BstKTI GATC 9 cut(s) 62, 175, 217, 774, 807, 949, 1048, 1111, 1406
BstMAI GTCTC 3 cut(s) 201, 1311, 1497
BstMBI GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
BstMCI CGRYCG 1 cut(s) 88
BstMWI GCNNNNNNNGC 4 cut(s) 81, 1273, 1276, 1279
BstNI CCWGG 1 cut(s) 256
BstNSI RCATGY 2 cut(s) 461, 840
BstSCI CCNGG 3 cut(s) 254, 1399, 1447
BstSFI CTRYAG 2 cut(s) 816, 1353
BstUI CGCG 1 cut(s) 90
BstV1I GCAGC 9 cut(s) 608, 808, 830, 1159, 1279, 1282, 1285, 1288, 1291
BstV2I GAAGAC 2 cut(s) 210, 855
BstX2I RGATCY 3 cut(s) 214, 1045, 1403
BstYI RGATCY 3 cut(s) 214, 1045, 1403
Bsu15I ATCGAT 2 cut(s) 414, 425
BsuTUI ATCGAT 2 cut(s) 414, 425
BtgI CCRYGG 2 cut(s) 1041, 1498
BtsCI GGATG 1 cut(s) 1429
BtsI GCAGTG 1 cut(s) 528
BtsIMutI CAGTG 2 cut(s) 528, 1192
Cac8I GCNNGC 6 cut(s) 286, 459, 500, 535, 1217, 1221
CciI TCATGA 1 cut(s) 1191
CfoI GCGC 2 cut(s) 28, 190
Cfr13I GGNCC 1 cut(s) 258
ClaI ATCGAT 2 cut(s) 414, 425
CseI GACGC 1 cut(s) 118
CsiI ACCWGGT 1 cut(s) 254
Csp6I GTAC 5 cut(s) 13, 39, 605, 628, 711
CviAII CATG 4 cut(s) 458, 837, 1192, 1499
CviQI GTAC 5 cut(s) 13, 39, 605, 628, 711
DdeI CTNAG 9 cut(s) 160, 392, 453, 487, 659, 738, 897, 1313, 1458
DpnI GATC 9 cut(s) 61, 174, 216, 773, 806, 948, 1047, 1110, 1405
DpnII GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
Eam1104I CTCTTC 3 cut(s) 131, 295, 582
EarI CTCTTC 3 cut(s) 131, 295, 582
Ecl136II GAGCTC 1 cut(s) 51
Eco130I CCWWGG 2 cut(s) 1166, 1498
Eco24I GRGCYC 2 cut(s) 53, 142
Eco31I GGTCTC 1 cut(s) 1311
Eco32I GATATC 1 cut(s) 448
Eco47I GGWCC 1 cut(s) 258
Eco53kI GAGCTC 1 cut(s) 51
Eco57I CTGAAG 2 cut(s) 222, 563
Eco88I CYCGRG 1 cut(s) 263
EcoICRI GAGCTC 1 cut(s) 51
EcoRI GAATTC 2 cut(s) 358, 364
EcoRII CCWGG 1 cut(s) 254
EcoRV GATATC 1 cut(s) 448
EcoT14I CCWWGG 2 cut(s) 1166, 1498
EcoT38I GRGCYC 2 cut(s) 53, 142
ErhI CCWWGG 2 cut(s) 1166, 1498
Esp3I CGTCTC 1 cut(s) 201
FaeI CATG 4 cut(s) 461, 840, 1195, 1502
FaqI GGGAC 4 cut(s) 45, 244, 956, 1382
FatI CATG 4 cut(s) 457, 836, 1191, 1498
FauI CCCGC 1 cut(s) 1028
FauNDI CATATG 1 cut(s) 696
FbaI TGATCA 1 cut(s) 771
FblI GTMKAC 1 cut(s) 371
FokI GGATG 1 cut(s) 1416
FriOI GRGCYC 2 cut(s) 53, 142
FspBI CTAG 8 cut(s) 335, 570, 746, 932, 1035, 1059, 1283, 1510
GlaI GCGC 2 cut(s) 27, 189
GsaI CCCAGC 1 cut(s) 1202
HapII CCGG 6 cut(s) 54, 231, 306, 888, 1401, 1448
HgaI GACGC 1 cut(s) 118
HhaI GCGC 2 cut(s) 28, 190
Hin1II CATG 4 cut(s) 461, 840, 1195, 1502
Hin6I GCGC 2 cut(s) 26, 188
HinP1I GCGC 2 cut(s) 26, 188
HincII GTYRAC 4 cut(s) 351, 372, 665, 842
HindII GTYRAC 4 cut(s) 351, 372, 665, 842
HindIII AAGCTT 1 cut(s) 519
HinfI GANTC 2 cut(s) 234, 705
HpaII CCGG 6 cut(s) 54, 231, 306, 888, 1401, 1448
Hpy166II GTNNAC 5 cut(s) 39, 351, 372, 665, 842
Hpy188I TCNGA 5 cut(s) 137, 172, 454, 1160, 1385
Hpy188III TCNNGA 6 cut(s) 200, 563, 581, 634, 740, 1192
Hpy8I GTNNAC 5 cut(s) 39, 351, 372, 665, 842
Hpy99I CGWCG 1 cut(s) 373
HpyAV CCTTC 4 cut(s) 256, 607, 728, 1344
HpyCH4III ACNGT 5 cut(s) 17, 36, 195, 376, 677
HpyCH4V TGCA 4 cut(s) 406, 596, 789, 818
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 1273, 1276, 1279
HpyF3I CTNAG 9 cut(s) 160, 392, 453, 487, 659, 738, 897, 1313, 1458
Hsp92II CATG 4 cut(s) 461, 840, 1195, 1502
HspAI GCGC 2 cut(s) 26, 188
Ksp22I TGATCA 1 cut(s) 771
Kzo9I GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
LguI GCTCTTC 1 cut(s) 295
LmnI GCTCC 1 cut(s) 56
Lsp1109I GCAGC 9 cut(s) 608, 808, 830, 1159, 1279, 1282, 1285, 1288, 1291
LweI GCATC 1 cut(s) 431
MabI ACCWGGT 1 cut(s) 254
MaeI CTAG 8 cut(s) 335, 570, 746, 932, 1035, 1059, 1283, 1510
MaeIII GTNAC 3 cut(s) 163, 677, 901
MalI GATC 9 cut(s) 61, 174, 216, 773, 806, 948, 1047, 1110, 1405
MbiI CCGCTC 1 cut(s) 1023
MboI GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
MboII GAAGA 9 cut(s) 110, 118, 215, 224, 282, 569, 860, 1151, 1398
MfeI CAATTG 1 cut(s) 1372
MflI RGATCY 3 cut(s) 214, 1045, 1403
MhlI GDGCHC 3 cut(s) 53, 77, 142
MluCI AATT 6 cut(s) 358, 364, 618, 937, 1154, 1372
MmeI TCCRAC 1 cut(s) 1408
MspA1I CMGCKG 3 cut(s) 821, 974, 1202
MspI CCGG 6 cut(s) 54, 231, 306, 888, 1401, 1448
MspR9I CCNGG 3 cut(s) 256, 1401, 1449
MunI CAATTG 1 cut(s) 1372
Mva1269I GAATGC 1 cut(s) 1489
MvaI CCWGG 1 cut(s) 256
MvnI CGCG 1 cut(s) 90
MwoI GCNNNNNNNGC 4 cut(s) 81, 1273, 1276, 1279
NciI CCSGG 2 cut(s) 1401, 1449
NcoI CCATGG 1 cut(s) 1498
NdeI CATATG 1 cut(s) 696
NdeII GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
NlaIII CATG 4 cut(s) 461, 840, 1195, 1502
NlaIV GGNNCC 2 cut(s) 260, 1047
NmuCI GTSAC 1 cut(s) 163
NspI RCATGY 2 cut(s) 461, 840
NspV TTCGAA 2 cut(s) 222, 362
PaeI GCATGC 1 cut(s) 461
PaeR7I CTCGAG 1 cut(s) 263
PagI TCATGA 1 cut(s) 1191
PciSI GCTCTTC 1 cut(s) 295
PcsI WCGNNNNNNNCGW 4 cut(s) 321, 353, 368, 1104
PctI GAATGC 1 cut(s) 1489
PfeI GAWTC 2 cut(s) 234, 705
Psp124BI GAGCTC 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 254
PspFI CCCAGC 1 cut(s) 1198
PspGI CCWGG 1 cut(s) 254
PspN4I GGNNCC 2 cut(s) 260, 1047
PspPI GGNCC 1 cut(s) 258
PspXI VCTCGAGB 1 cut(s) 263
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 3 cut(s) 214, 1045, 1403
PvuII CAGCTG 2 cut(s) 821, 974
RsaI GTAC 5 cut(s) 14, 40, 606, 629, 712
RsaNI GTAC 5 cut(s) 13, 39, 605, 628, 711
SacI GAGCTC 1 cut(s) 53
SalI GTCGAC 1 cut(s) 370
SapI GCTCTTC 1 cut(s) 295
Sau3AI GATC 9 cut(s) 59, 172, 214, 771, 804, 946, 1045, 1108, 1403
Sau96I GGNCC 1 cut(s) 258
ScrFI CCNGG 3 cut(s) 256, 1401, 1449
SduI GDGCHC 3 cut(s) 53, 77, 142
SexAI ACCWGGT 1 cut(s) 254
SfaNI GCATC 1 cut(s) 431
SfcI CTRYAG 2 cut(s) 816, 1353
Sfr274I CTCGAG 1 cut(s) 263
SfuI TTCGAA 2 cut(s) 222, 362
SinI GGWCC 1 cut(s) 258
SlaI CTCGAG 1 cut(s) 263
SmlI CTYRAG 2 cut(s) 263, 561
SmoI CTYRAG 2 cut(s) 263, 561
SphI GCATGC 1 cut(s) 461
Sse9I AATT 6 cut(s) 358, 364, 618, 937, 1154, 1372
SsiI CCGC 5 cut(s) 84, 185, 243, 1021, 1202
SspMI CTAG 8 cut(s) 335, 570, 746, 932, 1035, 1059, 1283, 1510
SstI GAGCTC 1 cut(s) 53
StyD4I CCNGG 3 cut(s) 254, 1399, 1447
StyI CCWWGG 2 cut(s) 1166, 1498
TaaI ACNGT 5 cut(s) 17, 36, 195, 376, 677
TasI AATT 6 cut(s) 358, 364, 618, 937, 1154, 1372
TatI WGTACW 2 cut(s) 604, 627
TauI GCSGC 1 cut(s) 188
TfiI GAWTC 2 cut(s) 234, 705
TscAI CASTG 2 cut(s) 535, 1192
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 9 cut(s) 596, 818, 821, 1147, 1267, 1270, 1273, 1276, 1279
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 7 cut(s) 9, 17, 226, 683, 1208, 1260, 1418
TspGWI ACGGA 2 cut(s) 83, 207
TspRI CASTG 2 cut(s) 535, 1192
VpaK11BI GGWCC 1 cut(s) 258
XapI RAATTY 3 cut(s) 358, 364, 1154
XceI RCATGY 2 cut(s) 461, 840
XhoI CTCGAG 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 371
XspI CTAG 8 cut(s) 335, 570, 746, 932, 1035, 1059, 1283, 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.