pycom15g23090

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0016176
Physical Location & Seq
Reverse (-)
17142013 .. 17144307
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g23090.2

Sequence Viewer

Length: 1518 bp
ATGAGGTGCCCCTACTGCTCCACCGGCCAAGCACGGTGCGCGACGACAACCAACTCCCGTCGTTCGATAACGGAGTGCACGTCGTGCGGCCGTGTGGTGGAAGAGCGCCAATCTCAATTCCACCACCTCTTCCACCTCCGTGCCCAAGACAACCCTCTCTGCCTCGTCACCTCCGACCTCCCCACCCTCCCCCACACCCAGCAACCCAACGACGCCGACGATGAAGACCCCTTCTTGCCCACCGGCTTCATCACCGCCTTCTCCACCTGGGCCCTGGAGCCCAACCCTCTCTTCCTCCGCTCCTCCCTCTCCTTCTCCGGCCACCTCGCCGAGCTGGAACGCACCCTCGAATCCACCTCCTCCTCCTCCACATCCTCGTCGTCGTCCACCGTGGTGGTCGATAATCTGAGGGCCTACATGCAAATCATCGATGTCGCTTCGATTCTGGGGTTGGAAAACGACATCTCGGACCACGCGTTTCAGCTCTTCAGGGACTGCTGCTCCACCACTTGCTTGCGGAATCGCAGCGTTGAAGCTCTCGCGACTGCTGCTCTGGTCCAGGCTATCAGAGAGGCCCAAGAGCCCAGAACCCTCCAGGAAATCTCCATTGCAGCAAATGTGCCCCAGAAAGAAATTGGCAAGTACATTAAGATACTTGGAGAAGCACTGCAGCTTAGTCAGCCCATCAACAGCAATTCGATATCGGTGCATATGCCGCGGTTTTGCACTCTCCTCCAGCTCAATAAATCTGCTCAGAAACTGGCAACTCACATTGGAGAGGTTGTCATCAACAAGTGCTTCTGCACGCGTAGGAACCCCATTAGCATCTCCGCAGCTGCAATATATTTAGCCTGCCAGCTTGAAGACAAGAGAAAAACTCAGGCAGAGATTTGTAAGGTGACTGGTCTTACTGAAGTTACTCTCCGAAAAGTCTACAAGGAGCTCTTGGAGAACTGGGATGACTTGCTCCCATCTAATTACACTCCTGCAGTTCCTCCAGAAAGAGCATTCCCTACCACTGTAATCGCTTCAGGCCGTTCTTCATCGTCTAAAGTTGATTTTGTTGATATACCACTTTATTTGGAGAGAGAAAAGCTGCTTGAAAGAAAACCGAACAAGCCAAACGAGGGATTAGACATGAACATTCCACCACCCGTATGTAAAGAAGAGTATGAGCGTAAAGGTAGTTCTCAAGGTCCGATGAATCAATCAACTACTTTCTGGCAATCCCAGGTTCCATATGATCTAAAGACGGCAGGACAAAAGTATGAGAATGGTGTGGAAGGAATGGACACGGACGAGCCCCAACCTAACCAACAGCCTAATCCAACTCATACTATAAACCCCCCAAGTTCAGGTGCATGTCCAGTTACCAGGCAGTTTCGGTGCCCATCTACATCAAGTTCTCCAACTGTGATGTATGTGCTGCCGCCGAAGCTTGCACCTGGTTATACCGAGCTTAGAAGCAGCGGTGGACAAAATGGAAGTGAAAGTGGCAGACACAGTGGGGAGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0000976 GO:0000977 GO:0000979 GO:0000988 GO:0000990 GO:0000991 GO:0000993 GO:0001012 GO:0001046 GO:0001047 GO:0001067 GO:0001098 GO:0001099 GO:0001139 GO:0001173 GO:0001174 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009526 GO:0009527 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019867 GO:0019899 GO:0022607 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031967 GO:0031968 GO:0031975 GO:0032774 GO:0032991 GO:0032993 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0042170 GO:0043167 GO:0043169 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043565 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060260 GO:0060261 GO:0065003 GO:0065004 GO:0065007 GO:0070063 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0098588 GO:0098805 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990114 GO:1990837 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05169 ko05203 map03022 map05169 map05203
Pfam Domains
Protein Families
TFIIB

Protein Analysis

506

Amino Acids

55.72

Weight (kDa)

6.0

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36650
fragaria_vesca FvH4_1g13530
malus_domestica MD15G1265100.v1.1
prunus_persica Prupe.7G152500_v2.0.a1
pyrus_communis pycom15g23090
rosa_chinensis RchiOBHm_Chr2g0101921
rosa_laevigata RLG00000017116
rosa_multiflora Rmu_sc0010781.1_g000003
rosa_roxburghii Rroxscaffold_2G00140950
rosa_rugosa Rorug02G0103100
rosa_samantha Rh2AG151100 Rh2BG156600 Rh2CG156400 Rh2DG156700
rosa_wichuraiana Rw2G011790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 6, 1386
AccBSI CCGCTC 1 cut(s) 300
AccI GTMKAC 1 cut(s) 933
AccII CGCG 5 cut(s) 41, 476, 542, 718, 808
AciI CCGC 9 cut(s) 87, 255, 298, 517, 716, 718, 831, 1430, 1470
AcoI YGGCCR 3 cut(s) 25, 88, 319
AcuI CTGAAG 3 cut(s) 472, 933, 1014
AcyI GRCGYC 1 cut(s) 213
AdeI CACNNNGTG 1 cut(s) 84
AfaI GTAC 1 cut(s) 644
AfiI CCNNNNNNNGG 3 cut(s) 97, 1127, 1355
AflIII ACRYGT 2 cut(s) 474, 806
AgsI TTSAA 3 cut(s) 533, 863, 1103
AjiI CACGTC 1 cut(s) 81
AjnI CCWGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
AleI CACNNNNGTG 2 cut(s) 138, 392
Alw21I GWGCWC 2 cut(s) 80, 945
Alw44I GTGCAC 1 cut(s) 76
AlwNI CAGNNNCTG 2 cut(s) 495, 760
AoxI GGCC 8 cut(s) 25, 88, 270, 319, 411, 573, 1033, 1512
ApaI GGGCCC 1 cut(s) 274
ApaLI GTGCAC 1 cut(s) 76
AspLEI GCGC 2 cut(s) 41, 108
AspS9I GGNCC 7 cut(s) 270, 271, 411, 469, 556, 574, 1196
AsuHPI GGTGA 3 cut(s) 160, 244, 910
AvaII GGWCC 3 cut(s) 469, 556, 1196
BaeGI GKGCMC 6 cut(s) 11, 80, 145, 274, 624, 1391
BanI GGYRCC 2 cut(s) 6, 1386
BanII GRGCYC 5 cut(s) 274, 282, 585, 945, 1305
BbsI GAAGAC 2 cut(s) 231, 870
Bbv12I GWGCWC 2 cut(s) 80, 945
BccI CCATC 3 cut(s) 692, 979, 1399
BceAI ACGGC 3 cut(s) 75, 1020, 1269
BcgI CGANNNNNNTGC 2 cut(s) 688, 722
BciT130I CCWGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
BfaI CTAG 1 cut(s) 1516
BfmI CTRYAG 2 cut(s) 668, 987
BfoI RGCGCY 1 cut(s) 109
Bme1390I CCNGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
Bme18I GGWCC 3 cut(s) 469, 556, 1196
BmgBI CACGTC 1 cut(s) 81
BmgT120I GGNCC 7 cut(s) 270, 271, 411, 469, 556, 574, 1196
BmiI GGNNCC 6 cut(s) 8, 272, 279, 815, 1236, 1388
BmrFI CCNGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
BmrI ACTGGG 1 cut(s) 964
BmsI GCATC 1 cut(s) 834
BmuI ACTGGG 1 cut(s) 964
BpiI GAAGAC 2 cut(s) 231, 870
BplI GAGNNNNNCTC 2 cut(s) 862, 894
BpmI CTGGAG 4 cut(s) 296, 578, 719, 981
BpuEI CTTGAG 1 cut(s) 1176
Bsa29I ATCGAT 1 cut(s) 429
BsaHI GRCGYC 1 cut(s) 213
BsaJI CCNNGG 5 cut(s) 267, 273, 390, 716, 1230
BsaXI ACNNNNNCTCC 6 cut(s) 65, 95, 485, 515, 768, 798
Bsc4I CCNNNNNNNGG 3 cut(s) 97, 1127, 1355
Bse118I RCCGGY 2 cut(s) 23, 242
Bse1I ACTGG 4 cut(s) 765, 907, 959, 1367
Bse3DI GCAATG 1 cut(s) 606
BseBI CCWGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 5 cut(s) 267, 273, 390, 716, 1230
BseGI GGATG 2 cut(s) 371, 964
BseLI CCNNNNNNNGG 3 cut(s) 97, 1127, 1355
BseMI GCAATG 1 cut(s) 606
BseMII CTCAG 3 cut(s) 398, 767, 893
BseNI ACTGG 4 cut(s) 765, 907, 959, 1367
BseRI GAGGAG 5 cut(s) 292, 349, 352, 355, 722
BseSI GKGCMC 6 cut(s) 11, 80, 145, 274, 624, 1391
BseX3I CGGCCG 1 cut(s) 88
BseYI CCCAGC 1 cut(s) 198
BsgI GTGCAG 1 cut(s) 787
Bsh1236I CGCG 5 cut(s) 41, 476, 542, 718, 808
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 8 cut(s) 27, 90, 272, 321, 413, 575, 1035, 1514
BshNI GGYRCC 2 cut(s) 6, 1386
BshVI ATCGAT 1 cut(s) 429
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 2 cut(s) 80, 945
BsiSI CCGG 3 cut(s) 24, 243, 318
BslFI GGGAC 1 cut(s) 506
BslI CCNNNNNNNGG 3 cut(s) 97, 1127, 1355
BsmFI GGGAC 1 cut(s) 506
BsmI GAATGC 1 cut(s) 1007
BsnI GGCC 8 cut(s) 27, 90, 272, 321, 413, 575, 1035, 1514
Bsp120I GGGCCC 1 cut(s) 270
Bsp143I GATC 1 cut(s) 1243
Bsp68I TCGCGA 1 cut(s) 542
BspACI CCGC 9 cut(s) 87, 255, 298, 517, 716, 718, 831, 1430, 1470
BspANI GGCC 8 cut(s) 27, 90, 272, 321, 413, 575, 1035, 1514
BspCNI CTCAG 3 cut(s) 399, 766, 892
BspDI ATCGAT 1 cut(s) 429
BspFNI CGCG 5 cut(s) 41, 476, 542, 718, 808
BspLI GGNNCC 6 cut(s) 8, 272, 279, 815, 1236, 1388
BspMAI CTGCAG 2 cut(s) 672, 991
BspQI GCTCTTC 2 cut(s) 96, 491
BspT107I GGYRCC 2 cut(s) 6, 1386
BsrBI CCGCTC 1 cut(s) 300
BsrDI GCAATG 1 cut(s) 606
BsrFI RCCGGY 2 cut(s) 23, 242
BsrI ACTGG 4 cut(s) 765, 907, 959, 1367
BssAI RCCGGY 2 cut(s) 23, 242
BssECI CCNNGG 5 cut(s) 267, 273, 390, 716, 1230
BssMI GATC 1 cut(s) 1243
BssNI GRCGYC 1 cut(s) 213
Bst2UI CCWGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
Bst4CI ACNGT 5 cut(s) 36, 391, 1021, 1414, 1505
Bst6I CTCTTC 5 cut(s) 96, 134, 296, 491, 1161
BstACI GRCGYC 1 cut(s) 213
BstAPI GCANNNNNTGC 1 cut(s) 84
BstC8I GCNNGC 5 cut(s) 515, 806, 853, 857, 1440
BstDEI CTNAG 5 cut(s) 407, 674, 753, 879, 1460
BstDSI CCRYGG 2 cut(s) 390, 716
BstF5I GGATG 2 cut(s) 371, 964
BstFNI CGCG 5 cut(s) 41, 476, 542, 718, 808
BstH2I RGCGCY 1 cut(s) 109
BstHHI GCGC 2 cut(s) 41, 108
BstKTI GATC 1 cut(s) 1246
BstMBI GATC 1 cut(s) 1243
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 8 cut(s) 15, 24, 38, 84, 548, 679, 715, 1435
BstNI CCWGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
BstNSI RCATGY 2 cut(s) 421, 1365
BstSCI CCNGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
BstSFI CTRYAG 2 cut(s) 668, 987
BstSLI GKGCMC 6 cut(s) 11, 80, 145, 274, 624, 1391
BstUI CGCG 5 cut(s) 41, 476, 542, 718, 808
BstV2I GAAGAC 2 cut(s) 231, 870
BstXI CCANNNNNNTGG 1 cut(s) 394
BstZI CGGCCG 1 cut(s) 88
Bsu15I ATCGAT 1 cut(s) 429
BsuRI GGCC 8 cut(s) 27, 90, 272, 321, 413, 575, 1035, 1514
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 2 cut(s) 390, 716
BtrI CACGTC 1 cut(s) 81
BtsCI GGATG 2 cut(s) 371, 964
BtsI GCAGTG 1 cut(s) 665
BtsIMutI CAGTG 3 cut(s) 665, 1017, 1510
BtuMI TCGCGA 1 cut(s) 542
Cac8I GCNNGC 5 cut(s) 515, 806, 853, 857, 1440
CaiI CAGNNNCTG 2 cut(s) 495, 760
CfoI GCGC 2 cut(s) 41, 108
Cfr10I RCCGGY 2 cut(s) 23, 242
Cfr13I GGNCC 7 cut(s) 270, 271, 411, 469, 556, 574, 1196
Cfr42I CCGCGG 1 cut(s) 719
ClaI ATCGAT 1 cut(s) 429
CseI GACGC 1 cut(s) 221
CsiI ACCWGGT 1 cut(s) 1444
Csp6I GTAC 1 cut(s) 643
CspCI CAANNNNNGTGG 2 cut(s) 1062, 1097
CviAII CATG 3 cut(s) 418, 1138, 1362
CviQI GTAC 1 cut(s) 643
DdeI CTNAG 5 cut(s) 407, 674, 753, 879, 1460
DpnI GATC 1 cut(s) 1245
DpnII GATC 1 cut(s) 1243
DraIII CACNNNGTG 1 cut(s) 84
EaeI YGGCCR 3 cut(s) 25, 88, 319
EagI CGGCCG 1 cut(s) 88
Eam1104I CTCTTC 5 cut(s) 96, 134, 296, 491, 1161
EarI CTCTTC 5 cut(s) 96, 134, 296, 491, 1161
Ecl136II GAGCTC 1 cut(s) 943
EclXI CGGCCG 1 cut(s) 88
Eco147I AGGCCT 1 cut(s) 1514
Eco24I GRGCYC 5 cut(s) 274, 282, 585, 945, 1305
Eco32I GATATC 1 cut(s) 702
Eco47I GGWCC 3 cut(s) 469, 556, 1196
Eco52I CGGCCG 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 943
Eco57I CTGAAG 3 cut(s) 472, 933, 1014
EcoICRI GAGCTC 1 cut(s) 943
EcoO109I RGGNCCY 2 cut(s) 271, 411
EcoRII CCWGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
EcoRV GATATC 1 cut(s) 702
EcoT38I GRGCYC 5 cut(s) 274, 282, 585, 945, 1305
FaeI CATG 3 cut(s) 421, 1141, 1365
FalI AAGNNNNNCTT 2 cut(s) 929, 961
FaqI GGGAC 1 cut(s) 506
FatI CATG 3 cut(s) 417, 1137, 1361
FauNDI CATATG 2 cut(s) 711, 1240
FblI GTMKAC 1 cut(s) 933
FokI GGATG 2 cut(s) 358, 971
FriOI GRGCYC 5 cut(s) 274, 282, 585, 945, 1305
FspBI CTAG 1 cut(s) 1516
GlaI GCGC 2 cut(s) 40, 107
GsaI CCCAGC 1 cut(s) 202
GsuI CTGGAG 4 cut(s) 296, 578, 719, 981
HaeII RGCGCY 1 cut(s) 109
HaeIII GGCC 8 cut(s) 27, 90, 272, 321, 413, 575, 1035, 1514
HapII CCGG 3 cut(s) 24, 243, 318
HgaI GACGC 1 cut(s) 221
HhaI GCGC 2 cut(s) 41, 108
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 3 cut(s) 421, 1141, 1365
Hin6I GCGC 2 cut(s) 39, 106
HinP1I GCGC 2 cut(s) 39, 106
HindIII AAGCTT 1 cut(s) 1436
HinfI GANTC 4 cut(s) 350, 442, 520, 1204
HpaII CCGG 3 cut(s) 24, 243, 318
HphI GGTGA 3 cut(s) 160, 244, 910
Hpy166II GTNNAC 4 cut(s) 78, 387, 934, 1475
Hpy188I TCNGA 7 cut(s) 175, 408, 469, 569, 756, 926, 1200
Hpy188III TCNNGA 2 cut(s) 541, 998
Hpy8I GTNNAC 4 cut(s) 78, 387, 934, 1475
Hpy99I CGWCG 7 cut(s) 46, 63, 85, 215, 221, 382, 385
HpyAV CCTTC 4 cut(s) 241, 268, 322, 1277
HpyCH4III ACNGT 5 cut(s) 36, 391, 1021, 1414, 1505
HpyCH4IV ACGT 1 cut(s) 80
HpyF10VI GCNNNNNNNGC 8 cut(s) 15, 24, 38, 84, 548, 679, 715, 1435
HpyF3I CTNAG 5 cut(s) 407, 674, 753, 879, 1460
HpySE526I ACGT 1 cut(s) 80
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 3 cut(s) 421, 1141, 1365
HspAI GCGC 2 cut(s) 39, 106
KspI CCGCGG 1 cut(s) 719
Kzo9I GATC 1 cut(s) 1243
LguI GCTCTTC 2 cut(s) 96, 491
LmnI GCTCC 6 cut(s) 23, 277, 305, 506, 940, 972
LweI GCATC 1 cut(s) 834
MabI ACCWGGT 1 cut(s) 1444
MaeI CTAG 1 cut(s) 1516
MaeII ACGT 1 cut(s) 80
MaeIII GTNAC 4 cut(s) 166, 898, 916, 1369
MalI GATC 1 cut(s) 1245
MbiI CCGCTC 1 cut(s) 300
MboI GATC 1 cut(s) 1243
MboII GAAGA 8 cut(s) 113, 121, 236, 283, 478, 875, 1032, 1178
MluCI AATT 4 cut(s) 116, 633, 694, 976
MluI ACGCGT 2 cut(s) 474, 806
MmeI TCCRAC 4 cut(s) 198, 432, 1352, 1433
MseI TTAA 1 cut(s) 648
MslI CAYNNNNRTG 3 cut(s) 138, 392, 1156
MspA1I CMGCKG 3 cut(s) 718, 836, 1470
MspI CCGG 3 cut(s) 24, 243, 318
MspR9I CCNGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
Mva1269I GAATGC 1 cut(s) 1007
MvaI CCWGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
MvnI CGCG 5 cut(s) 41, 476, 542, 718, 808
MwoI GCNNNNNNNGC 8 cut(s) 15, 24, 38, 84, 548, 679, 715, 1435
NdeI CATATG 2 cut(s) 711, 1240
NdeII GATC 1 cut(s) 1243
NlaIII CATG 3 cut(s) 421, 1141, 1365
NlaIV GGNNCC 6 cut(s) 8, 272, 279, 815, 1236, 1388
NmeAIII GCCGAG 1 cut(s) 355
NmuCI GTSAC 2 cut(s) 166, 898
NruI TCGCGA 1 cut(s) 542
NspI RCATGY 2 cut(s) 421, 1365
OliI CACNNNNGTG 2 cut(s) 138, 392
PceI AGGCCT 1 cut(s) 1514
PciSI GCTCTTC 2 cut(s) 96, 491
PcsI WCGNNNNNNNCGW 4 cut(s) 77, 171, 216, 473
PctI GAATGC 1 cut(s) 1007
PfeI GAWTC 4 cut(s) 350, 442, 520, 1204
PfoI TCCNGGA 1 cut(s) 594
Psp124BI GAGCTC 1 cut(s) 945
Psp6I CCWGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
PspFI CCCAGC 1 cut(s) 198
PspGI CCWGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
PspN4I GGNNCC 6 cut(s) 8, 272, 279, 815, 1236, 1388
PspOMI GGGCCC 1 cut(s) 270
PspPI GGNCC 7 cut(s) 270, 271, 411, 469, 556, 574, 1196
PsrI GAACNNNNNNTAC 2 cut(s) 1171, 1203
PstI CTGCAG 2 cut(s) 672, 991
PstNI CAGNNNCTG 2 cut(s) 495, 760
PvuII CAGCTG 1 cut(s) 836
RruI TCGCGA 1 cut(s) 542
RsaI GTAC 1 cut(s) 644
RsaNI GTAC 1 cut(s) 643
RseI CAYNNNNRTG 3 cut(s) 138, 392, 1156
SacI GAGCTC 1 cut(s) 945
SacII CCGCGG 1 cut(s) 719
SapI GCTCTTC 2 cut(s) 96, 491
SaqAI TTAA 1 cut(s) 648
Sau3AI GATC 1 cut(s) 1243
Sau96I GGNCC 7 cut(s) 270, 271, 411, 469, 556, 574, 1196
ScrFI CCNGG 7 cut(s) 268, 275, 560, 596, 1232, 1375, 1446
SexAI ACCWGGT 1 cut(s) 1444
SfaNI GCATC 1 cut(s) 834
SfcI CTRYAG 2 cut(s) 668, 987
Sfr303I CCGCGG 1 cut(s) 719
SgrBI CCGCGG 1 cut(s) 719
SinI GGWCC 3 cut(s) 469, 556, 1196
SmiMI CAYNNNNRTG 3 cut(s) 138, 392, 1156
SmlI CTYRAG 1 cut(s) 1191
SmoI CTYRAG 1 cut(s) 1191
Sse9I AATT 4 cut(s) 116, 633, 694, 976
SseBI AGGCCT 1 cut(s) 1514
SsiI CCGC 9 cut(s) 87, 255, 298, 517, 716, 718, 831, 1430, 1470
SspMI CTAG 1 cut(s) 1516
SstI GAGCTC 1 cut(s) 945
StuI AGGCCT 1 cut(s) 1514
StyD4I CCNGG 7 cut(s) 266, 273, 558, 594, 1230, 1373, 1444
TaaI ACNGT 5 cut(s) 36, 391, 1021, 1414, 1505
TaiI ACGT 1 cut(s) 83
TaqI TCGA 6 cut(s) 65, 348, 399, 429, 440, 698
TasI AATT 4 cut(s) 116, 633, 694, 976
TatI WGTACW 1 cut(s) 642
TauI GCSGC 3 cut(s) 90, 718, 1432
TfiI GAWTC 4 cut(s) 350, 442, 520, 1204
Tru1I TTAA 1 cut(s) 648
Tru9I TTAA 1 cut(s) 648
TscAI CASTG 3 cut(s) 672, 1024, 1510
TseFI GTSAC 2 cut(s) 166, 898
Tsp45I GTSAC 2 cut(s) 166, 898
TspDTI ATGAA 5 cut(s) 237, 238, 1032, 1154, 1217
TspGWI ACGGA 3 cut(s) 86, 128, 1310
TspRI CASTG 3 cut(s) 672, 1024, 1510
VneI GTGCAC 1 cut(s) 76
VpaK11BI GGWCC 3 cut(s) 469, 556, 1196
XceI RCATGY 2 cut(s) 421, 1365
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 632
XmiI GTMKAC 1 cut(s) 933
XspI CTAG 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.